ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet76d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [U... 32 0.67
2CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [U... 32 0.67
3CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic sub... 31 1.1
4CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [U... 31 1.1
5CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [U... 30 1.5
6CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [U... 30 2.6
7CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [U... 29 4.4
8CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [U... 29 4.4
9CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic sub... 28 7.4
10CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [U... 28 7.4

>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-5)
          Length = 1069

 Score = 31.6 bits (70), Expect = 0.67
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +1

Query: 1   HYINNSQALRAGICFMV 51
           HYINNS+ALR  +CFM+
Sbjct: 553 HYINNSKALREAMCFMM 569



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>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2)
           (Protein PROCUSTE1) (Protein Quill) (AraxCelA)
          Length = 1084

 Score = 31.6 bits (70), Expect = 0.67
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +1

Query: 1   HYINNSQALRAGICFMV 51
           HYINNS+ALR  +CFM+
Sbjct: 565 HYINNSKALREAMCFMM 581



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>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9|
           [UDP-forming] (EC 2.4.1.12) (AtCesA-9)
          Length = 1088

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +1

Query: 1   HYINNSQALRAGICFMV 51
           HYINNS+A+R  +CFM+
Sbjct: 571 HYINNSKAIREAMCFMM 587



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>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-2) (Ath-A)
          Length = 1084

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +1

Query: 1   HYINNSQALRAGICFMV 51
           HYINNS+A+R  +CFM+
Sbjct: 566 HYINNSKAIRESMCFMM 582



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>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1
           protein 1) (Isoxaben resistant protein 1) (Ath-B)
          Length = 1065

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +1

Query: 1   HYINNSQALRAGICFMV 51
           HYINNS+ALR  +CF++
Sbjct: 548 HYINNSKALREAMCFLM 564



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>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-4) (Irregular xylem protein 5)
           (AtIRX5)
          Length = 1049

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +1

Query: 1   HYINNSQALRAGICFMV 51
           HYINNS+A+R  +CF++
Sbjct: 504 HYINNSKAIRESMCFLM 520



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>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-7) (Irregular xylem protein 3)
           (AtIRX3)
          Length = 1026

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = +1

Query: 1   HYINNSQALRAGICFMV 51
           HY+NNS+A+R  +CF++
Sbjct: 527 HYVNNSKAVREAMCFLM 543



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>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-8) (Irregular xylem protein 1)
           (AtIRX1)
          Length = 985

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = +1

Query: 1   HYINNSQALRAGICFMV 51
           HY+NNS+A+R  +CF++
Sbjct: 473 HYVNNSKAVREAMCFLM 489



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>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10|
           [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13)
          Length = 1065

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +1

Query: 1   HYINNSQALRAGICFMV 51
           HY NNS+A++  +CFM+
Sbjct: 551 HYFNNSKAIKEAMCFMM 567



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>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-1) (Radially swollen protein 1)
           (AtRSW1)
          Length = 1081

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +1

Query: 1   HYINNSQALRAGICFMV 51
           HY NNS+A++  +CFM+
Sbjct: 564 HYFNNSKAIKEAMCFMM 580


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,307,462
Number of Sequences: 219361
Number of extensions: 50279
Number of successful extensions: 136
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 80,573,946
effective HSP length: 0
effective length of database: 80,573,946
effective search space used: 1933774704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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