ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet76d10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-... 53 2e-07
2EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EX... 50 1e-06
3EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EX... 49 3e-06
4EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EX... 49 3e-06
5EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EX... 48 7e-06
6EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EX... 47 1e-05
7EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-... 45 5e-05
8EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-... 45 6e-05
9EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EX... 45 6e-05
10EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EX... 43 2e-04
11EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXP... 42 3e-04
12EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EX... 42 4e-04
13EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EX... 40 0.001
14EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXP... 40 0.001
15EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-... 37 0.017
16EXP11_ARATH (Q9LNU3) Alpha-expansin 11 precursor (AtEXPA11) (At-... 35 0.037
17EXP25_ARATH (Q9FL77) Putative alpha-expansin 25 precursor (AtEXP... 33 0.24
18EXP23_ARATH (Q9FL79) Alpha-expansin 23 precursor (AtEXPA23) (At-... 33 0.24
19EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXP... 32 0.32
20EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXP... 32 0.32
21EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-... 30 1.6
22EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-... 30 1.6
23EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-... 29 2.7

>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)|
           (Ath-ExpAlpha-1.7)
          Length = 260

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 24/39 (61%), Positives = 24/39 (61%)
 Frame = +1

Query: 175 GSWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           GSWQTAHATFY              YGNLYS GYGTNTA
Sbjct: 32  GSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTA 70



to top

>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)|
           (Ath-ExpAlpha-1.6)
          Length = 257

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 22/39 (56%), Positives = 23/39 (58%)
 Frame = +1

Query: 175 GSWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           G+WQ AHATFY              YGNLYS GYGTNTA
Sbjct: 29  GAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTA 67



to top

>EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8)|
           (Ath-ExpAlpha-1.11)
          Length = 253

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 22/42 (52%), Positives = 22/42 (52%)
 Frame = +1

Query: 166 GDYGSWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           GD G WQ  HATFY              YGNLY  GYGTNTA
Sbjct: 25  GDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTA 66



to top

>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)|
           (Ath-ExpAlpha-1.8)
          Length = 257

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 21/39 (53%), Positives = 22/39 (56%)
 Frame = +1

Query: 175 GSWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           G W+TAHATFY              YGNLYS GYG NTA
Sbjct: 29  GGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTA 67



to top

>EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EXP3) (AtEx3)|
           (Ath-ExpAlpha-1.9)
          Length = 262

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 21/39 (53%), Positives = 21/39 (53%)
 Frame = +1

Query: 175 GSWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           G WQ AHATFY              YGNLYS GYG NTA
Sbjct: 34  GPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTA 72



to top

>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)|
           (Ath-ExpAlpha-1.2)
          Length = 250

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 21/39 (53%), Positives = 21/39 (53%)
 Frame = +1

Query: 175 GSWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           G W  AHATFY              YGNLYS GYGTNTA
Sbjct: 25  GGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTA 63



to top

>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)|
           (Ath-ExpAlpha-1.3)
          Length = 248

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 20/37 (54%), Positives = 20/37 (54%)
 Frame = +1

Query: 181 WQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           W  AHATFY              YGNLYS GYGTNTA
Sbjct: 25  WVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTA 61



to top

>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)|
           (Ath-ExpAlpha-1.1)
          Length = 249

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 20/39 (51%), Positives = 21/39 (53%)
 Frame = +1

Query: 175 GSWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           G W  AHATFY              YGNLYS GYGT+TA
Sbjct: 24  GGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTA 62



to top

>EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EXP9) (AtEx9)|
           (Ath-ExpAlpha-1.10)
          Length = 258

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 20/39 (51%), Positives = 20/39 (51%)
 Frame = +1

Query: 175 GSWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           G W  AHATFY              YGNLYS GYG NTA
Sbjct: 30  GPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTA 68



to top

>EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EXP5) (AtEx5)|
           (Ath-ExpAlpha-1.4)
          Length = 255

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 20/42 (47%), Positives = 20/42 (47%)
 Frame = +1

Query: 166 GDYGSWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           G  G W  AHATFY              YGNLYS GYG  TA
Sbjct: 33  GHMGPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETA 74



to top

>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)|
           (AtEx14) (Ath-ExpAlpha-1.5)
          Length = 255

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 20/42 (47%), Positives = 20/42 (47%)
 Frame = +1

Query: 166 GDYGSWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           G    W  A ATFY              YGNLYS GYGTNTA
Sbjct: 24  GYSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTA 65



to top

>EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2)|
           (Ath-ExpAlpha-1.12)
          Length = 255

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 18/41 (43%), Positives = 20/41 (48%)
 Frame = +1

Query: 169 DYGSWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           D G W+  HATFY              YGNL+S GYG  TA
Sbjct: 28  DNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTA 68



to top

>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)|
           (Ath-ExpAlpha-1.26)
          Length = 262

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 175 GSWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           G W+ AHATFY              YGNL+++GYG +TA
Sbjct: 35  GPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTA 73



to top

>EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXPA17) (At-EXP17)|
           (AtEx17) (Ath-ExpAlpha-1.13)
          Length = 255

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 18/37 (48%), Positives = 19/37 (51%)
 Frame = +1

Query: 181 WQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           W  AHATFY              YGNLY+ GY TNTA
Sbjct: 28  WLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTA 64



to top

>EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-EXP18) (AtEx18)|
           (Ath-ExpAlpha-1.25)
          Length = 257

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +1

Query: 181 WQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNT 288
           W+TA ATFY              YGN+Y +GYG  T
Sbjct: 31  WRTASATFYGDDTGSATMGGACGYGNMYDSGYGVAT 66



to top

>EXP11_ARATH (Q9LNU3) Alpha-expansin 11 precursor (AtEXPA11) (At-EXP11) (AtEx11)|
           (Ath-ExpAlpha-1.14)
          Length = 252

 Score = 35.4 bits (80), Expect = 0.037
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = +1

Query: 193 HATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           HATFY              YG+LYS GYGT TA
Sbjct: 30  HATFYGGSDASGTMGGACGYGDLYSAGYGTMTA 62



to top

>EXP25_ARATH (Q9FL77) Putative alpha-expansin 25 precursor (AtEXPA25) (At-EXP25)|
           (AtEx25) (Ath-ExpAlpha-1.18)
          Length = 276

 Score = 32.7 bits (73), Expect = 0.24
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = +1

Query: 178 SWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           SW  A ATFY              YG+L+  GYG  TA
Sbjct: 54  SWYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETA 91



to top

>EXP23_ARATH (Q9FL79) Alpha-expansin 23 precursor (AtEXPA23) (At-EXP23) (AtEx23)|
           (Ath-ExpAlpha-1.17)
          Length = 269

 Score = 32.7 bits (73), Expect = 0.24
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = +1

Query: 178 SWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           SW  A ATFY              YG+L+  GYG  TA
Sbjct: 47  SWYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETA 84



to top

>EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXPA22) (At-EXP22)|
           (AtEx22) (Ath-ExpAlpha-1.15)
          Length = 273

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = +1

Query: 178 SWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           +W  A ATFY              YGNL+  GYG  TA
Sbjct: 51  NWYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATA 88



to top

>EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXPA26) (At-EXP26)|
           (AtEx26) (Ath-ExpAlpha-1.16)
          Length = 279

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = +1

Query: 178 SWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           +W  A ATFY              YGNL+  GYG  TA
Sbjct: 57  NWYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATA 94



to top

>EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-EXP13) (AtEx13)|
           (Ath-ExpAlpha-1.22)
          Length = 266

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +1

Query: 169 DYGSWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNT 288
           D   W+ A AT+Y              YG+L  +GYG  T
Sbjct: 36  DASEWRPARATYYAATNPRDAVGGACGYGDLVKSGYGMAT 75



to top

>EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-EXP12) (AtEx12)|
           (Expansin S2) (Ath-ExpAlpha-1.24)
          Length = 252

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +1

Query: 181 WQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           W  AHAT+Y              Y N Y  G+G +TA
Sbjct: 27  WIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTA 63



to top

>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)|
           (Ath-ExpAlpha-1.19)
          Length = 312

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = +1

Query: 172 YGSWQTAHATFYXXXXXXXXXXXXXXYGNLYSTGYGTNTA 291
           +  W    ATFY              YG+L+  GYG  TA
Sbjct: 87  HSGWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETA 126


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,927,449
Number of Sequences: 219361
Number of extensions: 215814
Number of successful extensions: 553
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 80,573,946
effective HSP length: 72
effective length of database: 64,779,954
effective search space used: 1554718896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top