ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet76d07 |
|---|---|
| Clone Library Name | barley_pub |
>EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase EOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase EOMT1) Length = 357 Score = 53.9 bits (128), Expect = 1e-07 Identities = 28/73 (38%), Positives = 36/73 (49%) Frame = +2 Query: 107 ELLQAQADLWRHTLYYLTSMGLRCAVKLGIPTAIHNLGGVXXXXXXXXXXXXXXXKQPFL 286 +LLQAQ +W H + SM L+CA++LGIP +H G K Sbjct: 14 QLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQLLQSIPINKEKTQCF 73 Query: 287 GRLMRALVTSSVF 325 RLMRALV S+ F Sbjct: 74 QRLMRALVNSNFF 86
>CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase CVOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase CVOMT1) Length = 356 Score = 53.1 bits (126), Expect = 2e-07 Identities = 28/73 (38%), Positives = 36/73 (49%) Frame = +2 Query: 107 ELLQAQADLWRHTLYYLTSMGLRCAVKLGIPTAIHNLGGVXXXXXXXXXXXXXXXKQPFL 286 +LLQAQA +W H + SM L+CA++LGIP +H K Sbjct: 14 QLLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQLLKAIPINKEKSQSF 73 Query: 287 GRLMRALVTSSVF 325 RLMRALV S+ F Sbjct: 74 QRLMRALVNSNFF 86
>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)| Length = 364 Score = 47.8 bits (112), Expect = 7e-06 Identities = 27/72 (37%), Positives = 35/72 (48%) Frame = +2 Query: 110 LLQAQADLWRHTLYYLTSMGLRCAVKLGIPTAIHNLGGVXXXXXXXXXXXXXXXKQPFLG 289 LL AQ +LW T ++ SM L+ A+ L I AIH GG + L Sbjct: 13 LLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSRVSSLR 72 Query: 290 RLMRALVTSSVF 325 RLMR L T++VF Sbjct: 73 RLMRVLTTTNVF 84
>7OMT9_MEDSA (O22309) Isoflavone-7-O-methytransferase 9 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 9) (7 IOMT-9) Length = 352 Score = 41.2 bits (95), Expect = 6e-04 Identities = 25/76 (32%), Positives = 36/76 (47%) Frame = +2 Query: 98 KGAELLQAQADLWRHTLYYLTSMGLRCAVKLGIPTAIHNLGGVXXXXXXXXXXXXXXXKQ 277 K +E+ +AQA L++H ++ SM L+ AV + IP IHN G K Sbjct: 9 KPSEIFKAQALLYKHIYAFIDSMSLKWAVGMNIPNIIHNHGKPISLSNLVSILQVPSSKI 68 Query: 278 PFLGRLMRALVTSSVF 325 + RLMR L + F Sbjct: 69 GNVRRLMRYLAHNGFF 84
>7OMT8_MEDSA (O24529) Isoflavone-7-O-methytransferase 8 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 8) (7-IOMT-8) Length = 352 Score = 39.3 bits (90), Expect = 0.002 Identities = 24/76 (31%), Positives = 36/76 (47%) Frame = +2 Query: 98 KGAELLQAQADLWRHTLYYLTSMGLRCAVKLGIPTAIHNLGGVXXXXXXXXXXXXXXXKQ 277 K +E+ +AQA L++H ++ SM L+ AV++ IP I N G K Sbjct: 9 KPSEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKI 68 Query: 278 PFLGRLMRALVTSSVF 325 + RLMR L + F Sbjct: 69 GNVRRLMRYLAHNGFF 84
>7OMT6_MEDSA (O22308) Isoflavone-7-O-methytransferase 6 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 6) (7-IOMT-6) Length = 352 Score = 39.3 bits (90), Expect = 0.002 Identities = 24/76 (31%), Positives = 36/76 (47%) Frame = +2 Query: 98 KGAELLQAQADLWRHTLYYLTSMGLRCAVKLGIPTAIHNLGGVXXXXXXXXXXXXXXXKQ 277 K +E+ +AQA L++H ++ SM L+ AV++ IP I N G K Sbjct: 9 KPSEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKI 68 Query: 278 PFLGRLMRALVTSSVF 325 + RLMR L + F Sbjct: 69 GNVRRLMRYLAHNGFF 84
>6OMT_COPJA (Q9LEL6) (RS)-norcoclaurine 6-O-methyltransferase (EC 2.1.1.128)| (S-adenosyl-L-methionine:norcoclaurine 6-O-methyltransferase) (6-OMT) Length = 347 Score = 38.9 bits (89), Expect = 0.003 Identities = 26/80 (32%), Positives = 36/80 (45%) Frame = +2 Query: 86 MEVPKGAELLQAQADLWRHTLYYLTSMGLRCAVKLGIPTAIHNLGGVXXXXXXXXXXXXX 265 MEV K + L +QA LW + S+ L+CAV+L + IHN G Sbjct: 1 MEVKK--DNLSSQAKLWNFIYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRLPSQ 58 Query: 266 XXKQPFLGRLMRALVTSSVF 325 + L R+MR LV +F Sbjct: 59 PVNEDALYRVMRYLVHMKLF 78
>COOMT_COPJA (Q8H9A8) Columbamine O-methyltransferase (EC 2.1.1.118) (CoOMT)| Length = 351 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/38 (44%), Positives = 24/38 (63%) Frame = +2 Query: 113 LQAQADLWRHTLYYLTSMGLRCAVKLGIPTAIHNLGGV 226 ++AQA +W+H + ++ LR V LGIP IHN G V Sbjct: 13 IKAQAQVWKHMFGFAETIMLRSTVSLGIPDIIHNNGPV 50
>SYE_RHOBA (Q7UNF9) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 515 Score = 32.7 bits (73), Expect = 0.23 Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 14/80 (17%) Frame = -2 Query: 313 GDQRAHQAAKERLLACGDGQRG----------RQVSQRGDPAEVVDRRRDAELDGAA--- 173 GDQ ++AA E+LLA G R R+ +Q+G A V DRR AE + A Sbjct: 86 GDQ--YRAAAEKLLADGHAYRDFAKPEELQTLREEAQKGGEAFVYDRRWMAEDEATAAKF 143 Query: 172 EPHGRE-VVKGVAPQVGLCL 116 E GR+ VV+ P+ G C+ Sbjct: 144 EAEGRQGVVRLKMPREGQCV 163
>4OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase| (EC 2.1.1.116) (S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase) (4'-OMT) Length = 350 Score = 32.0 bits (71), Expect = 0.39 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = +2 Query: 113 LQAQADLWRHTLYYLTSMGLRCAVKLGIPTAIHN 214 ++AQA +W+ + S+ LRCAV+LGI I N Sbjct: 12 IKAQAHVWKIIYGFADSLVLRCAVELGIVDIIDN 45
>POLN_RUBVT (P13889) Nonstructural polyprotein [Contains: Protease (EC| 3.4.22.-) (p150); RNA-directed RNA polymerase/helicase (EC 2.7.7.48) (EC 3.6.1.-) (p90)] Length = 2115 Score = 31.6 bits (70), Expect = 0.51 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -2 Query: 223 PAEVVDRRRDAELDGAAEPHGREVVKGVAPQVGLCLQELGTLGDLHLR 80 PA DR RDAEL+ A EP G P + G +HLR Sbjct: 774 PAGPADRARDAELEVACEPSGPPTSTRADPDSDIVESYARAAGPVHLR 821
>EFG1_GEOSL (Q74A61) Elongation factor G 1 (EF-G 1)| Length = 689 Score = 29.3 bits (64), Expect = 2.5 Identities = 19/54 (35%), Positives = 28/54 (51%) Frame = -2 Query: 331 VGEDA*GDQRAHQAAKERLLACGDGQRGRQVSQRGDPAEVVDRRRDAELDGAAE 170 VGE+ G + E L+ DG +GR VS+ PA+++D R+ D AE Sbjct: 165 VGEET-GFRGVIDLLAEELITFADGDQGRTVSRGPVPADLLDAAREGR-DAVAE 216
>HAP1_YEAST (P12351) Heme-responsive zinc finger transcription factor HAP1| (Heme activator protein 1) (CYP1 activatory protein) Length = 1483 Score = 28.1 bits (61), Expect = 5.7 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +2 Query: 134 WRHTLYYLTSMGLRCAVKLGIPTAIHNL 217 WR YY+ SM + ++ LG P + NL Sbjct: 777 WRKIWYYIVSMDVNQSLSLGSPRLLRNL 804
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = -2 Query: 172 EPHGREVVKGVAPQVGLCLQELGTLGDLHLRCLGGHCS 59 E RE++ GV P V CLQE L + G H S Sbjct: 366 EEFAREMLAGVNPNVICCLQEFPPRSKLDSQIYGDHTS 403
>VACHT_RAT (Q62666) Vesicular acetylcholine transporter (VAChT) (Solute| carrier family 18 member 3) (rVAT) Length = 530 Score = 27.7 bits (60), Expect = 7.4 Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = -3 Query: 120 ACRSSAPLGTSISGAWAAIALLD-HLLPFL 34 ACRS APL S+ G IAL+D LLP L Sbjct: 376 ACRSFAPLVVSLCGLCFGIALVDTALLPTL 405
>VACHT_MOUSE (O35304) Vesicular acetylcholine transporter (VAChT) (Solute| carrier family 18 member 3) Length = 530 Score = 27.7 bits (60), Expect = 7.4 Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = -3 Query: 120 ACRSSAPLGTSISGAWAAIALLD-HLLPFL 34 ACRS APL S+ G IAL+D LLP L Sbjct: 376 ACRSFAPLVVSLCGLCFGIALVDTALLPTL 405
>CNOT6_RAT (Q6AXU9) CCR4-NOT transcription complex subunit 6 (EC 3.1.-.-)| (Cytoplasmic deadenylase) (Carbon catabolite repressor protein 4 homolog) (CCR4 carbon catabolite repression 4-like) Length = 557 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 273 LLAGMDSAAARSASEETPPRLWIAVGMPSLT 181 LL + A R ++E+ PPR WI + P T Sbjct: 153 LLDNLSGTAKRISTEQPPPRSWIMLQEPDRT 183
>CNOT6_MOUSE (Q8K3P5) CCR4-NOT transcription complex subunit 6 (EC 3.1.-.-)| (Cytoplasmic deadenylase) (Carbon catabolite repressor protein 4 homolog) (CCR4 carbon catabolite repression 4-like) Length = 557 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 273 LLAGMDSAAARSASEETPPRLWIAVGMPSLT 181 LL + A R ++E+ PPR WI + P T Sbjct: 153 LLDNLSGTAKRISTEQPPPRSWIMLQEPDRT 183
>Y942_TREPA (O83912) Hypothetical protein TP0942| Length = 154 Score = 27.7 bits (60), Expect = 7.4 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = -2 Query: 247 RQVSQRGDPAEVVDRRRDAELDGAAEPHGREVVKGVAPQVGLCLQELGTLGDL-HLRC 77 +QV+ AE V R EL+ A + V K +AP LCLQ+ + +L LRC Sbjct: 42 QQVAIEAQDAETV--LRHVELEEALLGDVQRVQKALAPMEQLCLQQASGVQELAQLRC 97
>POLN_RUBVM (Q86500) Nonstructural polyprotein [Contains: Protease (EC| 3.4.22.-) (p150); RNA-directed RNA polymerase/helicase (EC 2.7.7.48) (EC 3.6.1.-) (p90)] Length = 2115 Score = 27.7 bits (60), Expect = 7.4 Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 5/55 (9%) Frame = -2 Query: 229 GDP-----AEVVDRRRDAELDGAAEPHGREVVKGVAPQVGLCLQELGTLGDLHLR 80 GDP AE DR R AEL+ EP G P + G +HLR Sbjct: 768 GDPVPPTTAEPADRARHAELEVVYEPSGPPTSTKADPDSDIVESYARAAGPVHLR 822
>VACHT_HUMAN (Q16572) Vesicular acetylcholine transporter (VAChT) (Solute| carrier family 18 member 3) Length = 532 Score = 27.7 bits (60), Expect = 7.4 Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = -3 Query: 120 ACRSSAPLGTSISGAWAAIALLD-HLLPFL 34 ACRS APL S+ G IAL+D LLP L Sbjct: 376 ACRSFAPLVVSLCGLCFGIALVDTALLPTL 405
>CNOT6_HUMAN (Q9ULM6) CCR4-NOT transcription complex subunit 6 (EC 3.1.-.-)| (Cytoplasmic deadenylase) (Carbon catabolite repressor protein 4 homolog) (CCR4 carbon catabolite repression 4-like) Length = 557 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -3 Query: 273 LLAGMDSAAARSASEETPPRLWIAVGMPSLT 181 LL + A R +E+ PPR WI + P T Sbjct: 153 LLDNLSGTAKRITTEQPPPRSWIMLQEPDRT 183
>ICIA_AERSA (P70773) Chromosome initiation inhibitor (OriC replication| inhibitor) Length = 299 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = -2 Query: 226 DPAEVVDRRRDAELDGAAEPHGREVVKGVAPQVGLCLQELGTL 98 D +DR R+ + GA HG+ P G C+ ELG + Sbjct: 129 DECRTLDRVREGQAFGAVSLHGQ-------PLAGCCVDELGEM 164
>THIC_MYCTU (P66911) Thiamine biosynthesis protein thiC| Length = 547 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = -2 Query: 265 GDGQRGRQVSQRGDPAEVVDRRRDAELDGAAEPHGREVV 149 GDG R ++ D A+ + R EL A+ HG +V+ Sbjct: 300 GDGLRPGSIADANDAAQFAELRTLGELTKIAKAHGAQVM 338
>THIC_MYCLE (Q9ZBL0) Thiamine biosynthesis protein thiC| Length = 547 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = -2 Query: 265 GDGQRGRQVSQRGDPAEVVDRRRDAELDGAAEPHGREVV 149 GDG R ++ D A+ + R EL A+ HG +V+ Sbjct: 304 GDGLRPGSIADANDTAQFAELRTLGELSKIAKVHGAQVM 342
>THIC_MYCBO (P66912) Thiamine biosynthesis protein thiC| Length = 547 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = -2 Query: 265 GDGQRGRQVSQRGDPAEVVDRRRDAELDGAAEPHGREVV 149 GDG R ++ D A+ + R EL A+ HG +V+ Sbjct: 300 GDGLRPGSIADANDAAQFAELRTLGELTKIAKAHGAQVM 338 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,465,551 Number of Sequences: 219361 Number of extensions: 676428 Number of successful extensions: 2193 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2162 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2191 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
