ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet76c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ139268.1| Triticum aestivum geranylgeranyl hydrogenase mRNA... 337 1e-89
2ref|XM_849457.1| PREDICTED: Canis familiaris similar to Ephrin-B... 46 0.062
3emb|AL031280.7|HS187B23 Human DNA sequence from clone RP1-187B23... 46 0.062
4gb|AC172160.3| Pan troglodytes chromosome X clone PTB-96F20 map ... 44 0.24
5gb|AY425004.1| Homo sapiens estrogen receptor 1 (ESR1) gene, com... 44 0.24
6emb|AL356311.6| Human DNA sequence from clone RP3-443C4 on chrom... 44 0.24
7emb|AL109797.18|HS1172N10 Human DNA sequence from clone RP5-1172... 44 0.24
8ref|NM_175445.3| Mus musculus Ras association (RalGDS/AF-6) doma... 44 0.24
9dbj|AK018504.1| Mus musculus adult male colon cDNA, RIKEN full-l... 44 0.24
10dbj|AK172906.1| Mus musculus mRNA for mKIAA0168 protein 44 0.24
11emb|AJ340477.1|HSA340477 Homo sapiens genomic sequence surroundi... 44 0.24
12gb|BC057402.1| Mus musculus Ras association (RalGDS/AF-6) domain... 44 0.24
13emb|AL833794.9| Mouse DNA sequence from clone RP23-401J24 on chr... 44 0.24
14ref|NM_173083.2| Homo sapiens lin-9 homolog (C. elegans) (LIN9),... 42 0.97
15gb|AC113181.7| Mus musculus chromosome 5, clone RP23-359I6, comp... 42 0.97
16gb|AC129187.4| Mus musculus BAC clone RP23-427D4 from chromosome... 42 0.97
17emb|AL359742.15| Human DNA sequence from clone RP11-125A15 on ch... 42 0.97
18emb|AL353649.12| Human DNA sequence from clone RP11-30P16 on chr... 42 0.97
19gb|BC045625.1| Homo sapiens lin-9 homolog (C. elegans), mRNA (cD... 42 0.97
20emb|BX000486.13| Zebrafish DNA sequence from clone DKEY-149M16 i... 42 0.97
21gb|AC020642.7| Homo sapiens chromosome 10 clone RP11-275D14, com... 42 0.97
22gb|AC083900.6| Homo sapiens BAC clone RP11-372C13 from 2, comple... 42 0.97
23gb|AY166859.1| Homo sapiens TGS2 mRNA, complete cds 42 0.97
24dbj|AP001686.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 0.97
25gb|AC147994.4| Mus musculus BAC clone RP24-338F2 from 6, complet... 42 0.97
26gb|AC146300.4| Mus musculus BAC clone RP23-38L11 from 3, complet... 42 0.97
27dbj|AP001253.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 42 0.97
28dbj|AB034704.1| Rubrivivax gelatinosus photosynthetic gene clust... 42 0.97
29ref|XM_477707.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.8
30gb|AY621988.1| Ischadium recurvum voucher UMMZ 300126.6 5.8S rib... 40 3.8
31gb|AY621987.1| Ischadium recurvum voucher UMMZ 300128.2 5.8S rib... 40 3.8
32gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome... 40 3.8
33gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 3.8
34gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 3.8
35gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 3.8
36gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 3.8
37emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 3.8
38ref|XM_850321.1| PREDICTED: Canis familiaris similar to CASK-int... 40 3.8
39gb|AC123034.5| Mus musculus BAC clone RP24-484E17 from chromosom... 40 3.8
40gb|AC183690.3| Cavia porcellus clone CH234-212D11, complete sequ... 40 3.8
41ref|NM_003828.2| Homo sapiens myotubularin related protein 1 (MT... 40 3.8
42gb|AC165156.3| Mus musculus BAC clone RP23-298I7 from chromosome... 40 3.8
43gb|AC175208.3| Cavia porcellus clone CH234-14J14, complete sequence 40 3.8
44emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome... 40 3.8
45emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 40 3.8
46emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 3.8
47emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 3.8
48gb|BC032947.1| Homo sapiens myotubularin related protein 1, mRNA... 40 3.8
49emb|AJ224979.1|HSA224979 Homo sapiens mRNA for MTMR1 protein 40 3.8
50gb|AC092999.3| Homo sapiens 3 BAC RP11-170K4 (Roswell Park Cance... 40 3.8
51gb|AC078917.14| Homo sapiens 12q BAC RP1-78O14 (Roswell Park Can... 40 3.8
52gb|AC008387.6| Homo sapiens chromosome 5 clone CTC-229P9, comple... 40 3.8
53gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 3.8
54dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
55dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
56gb|AC016614.6|AC016614 Homo sapiens chromosome 5 clone CTD-2217F... 40 3.8
57gb|AC024166.3|AC024166 Homo sapiens chromosome 3 clone RP11-429F... 40 3.8
58gb|AC156837.2| Mus musculus BAC clone RP23-18K24 from chromosome... 40 3.8
59gb|AF002223.2| Homo sapiens chromosome X multiple clones map q28... 40 3.8
60gb|AC114290.2| Homo sapiens chromosome 5 clone CTD-3062C19, comp... 40 3.8
61gb|AC083855.3| Homo sapiens chromosome 3 clone RP11-622I12 map 3... 40 3.8
62dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
63dbj|AP004349.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
64emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 3.8
65gb|AF057354.1|AF057354 Homo sapiens myotubularin-related protein... 40 3.8
66gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 3.8
67gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.8
68gb|AC140840.3| Mus musculus BAC clone RP24-545K17 from 13, compl... 40 3.8
69gb|AC133188.4| Mus musculus BAC clone RP23-330F6 from 13, comple... 40 3.8
70gb|AC142414.3| Mus musculus BAC clone RP23-372N15 from 8, comple... 40 3.8
71gb|AD000002.1|MSGY154 Mycobacterium tuberculosis sequence from c... 40 3.8
72gb|AC139379.4| Mus musculus BAC clone RP23-233P1 from chromosome... 40 3.8
73gb|AC161053.5| Mus musculus BAC clone RP23-381G13 from chromosom... 40 3.8 
>gb|DQ139268.1| Triticum aestivum geranylgeranyl hydrogenase mRNA, complete cds
          Length = 1704

 Score =  337 bits (170), Expect = 1e-89
 Identities = 206/217 (94%), Gaps = 2/217 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  cactcgctcgctccctccccaccgcacgtcgagctcgagccagccgaggagctc--accg 72
           ||||||||||||| |||||| ||||||||| |||||||||||||||||||||||  ||||
Sbjct: 29  cactcgctcgctcactccccgccgcacgtccagctcgagccagccgaggagctctcaccg 88

                                                                       
Query: 73  gggcaagaatgacgtccctctcctcgtccgcggccacggcgcgcgccaccttcctccctt 132
            ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 89  cggcaacaatgacgtccctctcctcgtccgcggccgcggcgcgcgccaccttcctccctt 148

                                                                       
Query: 133 cctcctgccgggcgcggccggcgggcggcaggaggtcgcagctcctcgtgacccgcgcgg 192
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 149 cctcctgccgggcgcggccggcgggcggcaggaggtcgcagctcctcgtgacacgcgcgg 208

                                                
Query: 193 cgacgtcgagccccaagctccccggcgggcggaagct 229
           || |||| |||||||||||||||||||||||||||||
Sbjct: 209 cggcgtccagccccaagctccccggcgggcggaagct 245
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>ref|XM_849457.1| PREDICTED: Canis familiaris similar to Ephrin-B2 precursor
           (EPH-related receptor tyrosine kinase ligand 5) (LERK-5)
           (HTK ligand) (HTK-L) (LOC611745), mRNA
          Length = 1241

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 138 tgccgggcgcggccggcgggcggcagg 164
           |||||||||||| ||||||||||||||
Sbjct: 37  tgccgggcgcgggcggcgggcggcagg 11
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>emb|AL031280.7|HS187B23 Human DNA sequence from clone RP1-187B23 on chromosome 1p35.1-36.13
              Contains the 5' end of the MAN1C1 gene for mannosidase
              alpha class 1C member 1, a novel gene and a CPG island,
              complete sequence
          Length = 129120

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 141    cgggcgcggccggcgggcggcaggagg 167
              |||||| ||||||||||||||||||||
Sbjct: 122549 cgggcgtggccggcgggcggcaggagg 122523
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>gb|AC172160.3| Pan troglodytes chromosome X clone PTB-96F20 map human otholog p11.4,
              complete sequence
          Length = 203345

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 116    cgccaccttcctcccttcctcctgcc 141
              |||||||||||||||| |||||||||
Sbjct: 198623 cgccaccttcctccctccctcctgcc 198598
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>gb|AY425004.1| Homo sapiens estrogen receptor 1 (ESR1) gene, complete cds
          Length = 299637

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 125  cctcccttcctcctgccgggcgcggc 150
            ||||||| ||||||||||||||||||
Sbjct: 2850 cctccctccctcctgccgggcgcggc 2825
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>emb|AL356311.6| Human DNA sequence from clone RP3-443C4 on chromosome 6 Contains the
             part of the ESR1 gene for estrogen receptor 1, a novel
             gene and a CpG island, complete sequence
          Length = 67346

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 125   cctcccttcctcctgccgggcgcggc 150
             ||||||| ||||||||||||||||||
Sbjct: 50122 cctccctccctcctgccgggcgcggc 50097
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>emb|AL109797.18|HS1172N10 Human DNA sequence from clone RP5-1172N10 on chromosome Xp11.3-11.4
              Contains the 3' end of the USP9X gene for X chromosome
              ubiquitin specific protease 9 (fat facets-like Drosophila),
              a novel gene and a CpG island, complete sequence
          Length = 129293

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 116    cgccaccttcctcccttcctcctgcc 141
              |||||||||||||||| |||||||||
Sbjct: 102188 cgccaccttcctccctccctcctgcc 102163
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>ref|NM_175445.3| Mus musculus Ras association (RalGDS/AF-6) domain family 2 (Rassf2),
            mRNA
          Length = 4646

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 119  caccttcctcccttcctcctgc 140
            ||||||||||||||||||||||
Sbjct: 4218 caccttcctcccttcctcctgc 4239
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>dbj|AK018504.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched
           library, clone:9030412M04 product:unclassifiable, full
           insert sequence
          Length = 1331

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 119 caccttcctcccttcctcctgc 140
           ||||||||||||||||||||||
Sbjct: 944 caccttcctcccttcctcctgc 965
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>dbj|AK172906.1| Mus musculus mRNA for mKIAA0168 protein
          Length = 4556

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 119  caccttcctcccttcctcctgc 140
            ||||||||||||||||||||||
Sbjct: 4172 caccttcctcccttcctcctgc 4193
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>emb|AJ340477.1|HSA340477 Homo sapiens genomic sequence surrounding NotI site, clone
           NR3-AN17C
          Length = 656

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 125 cctcccttcctcctgccgggcgcggc 150
           ||||||| ||||||||||||||||||
Sbjct: 319 cctccctccctcctgccgggcgcggc 294
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>gb|BC057402.1| Mus musculus Ras association (RalGDS/AF-6) domain family 2, mRNA
            (cDNA clone MGC:62442 IMAGE:5698333), complete cds
          Length = 4646

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 119  caccttcctcccttcctcctgc 140
            ||||||||||||||||||||||
Sbjct: 4218 caccttcctcccttcctcctgc 4239
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>emb|AL833794.9| Mouse DNA sequence from clone RP23-401J24 on chromosome 2, complete
              sequence
          Length = 206549

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 119    caccttcctcccttcctcctgc 140
              ||||||||||||||||||||||
Sbjct: 191332 caccttcctcccttcctcctgc 191311
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>ref|NM_173083.2| Homo sapiens lin-9 homolog (C. elegans) (LIN9), mRNA
          Length = 3340

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 121 ccttcctcccttcctcctgccgggcgcggccgg 153
           ||||||||||||||||| ||| ||| |||||||
Sbjct: 103 ccttcctcccttcctcccgcccggctcggccgg 135
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>gb|AC113181.7| Mus musculus chromosome 5, clone RP23-359I6, complete sequence
          Length = 213684

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 121    ccttcctcccttcctcctgcc 141
              |||||||||||||||||||||
Sbjct: 196108 ccttcctcccttcctcctgcc 196088
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>gb|AC129187.4| Mus musculus BAC clone RP23-427D4 from chromosome 5, complete sequence
          Length = 198245

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   ccttcctcccttcctcctgcc 141
             |||||||||||||||||||||
Sbjct: 96684 ccttcctcccttcctcctgcc 96664
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>emb|AL359742.15| Human DNA sequence from clone RP11-125A15 on chromosome 1 Contains the
             5' end of the gene for TUDOR gene similar (TGS), a
             pseudogene similar to part of nuclease sensitive element
             binding protein 1 (NSEP1), the 3' end of the ADPRT gene
             for ADP-ribosyltransferase (NAD+; poly (ADP-ribose)
             polymerase) and a CpG island, complete sequence
          Length = 86196

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 121   ccttcctcccttcctcctgccgggcgcggccgg 153
             ||||||||||||||||| ||| ||| |||||||
Sbjct: 10414 ccttcctcccttcctcccgcccggctcggccgg 10382
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>emb|AL353649.12| Human DNA sequence from clone RP11-30P16 on chromosome 9, complete
             sequence
          Length = 64791

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   ccttcctcccttcctcctgcc 141
             |||||||||||||||||||||
Sbjct: 50178 ccttcctcccttcctcctgcc 50158
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>gb|BC045625.1| Homo sapiens lin-9 homolog (C. elegans), mRNA (cDNA clone MGC:39574
           IMAGE:4837217), complete cds
          Length = 3340

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 121 ccttcctcccttcctcctgccgggcgcggccgg 153
           ||||||||||||||||| ||| ||| |||||||
Sbjct: 103 ccttcctcccttcctcccgcccggctcggccgg 135
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>emb|BX000486.13| Zebrafish DNA sequence from clone DKEY-149M16 in linkage group 10,
             complete sequence
          Length = 195419

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 14    acactcgctcgctccctcccc 34
             |||||||||||||||||||||
Sbjct: 48051 acactcgctcgctccctcccc 48031
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>gb|AC020642.7| Homo sapiens chromosome 10 clone RP11-275D14, complete sequence
          Length = 145697

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   ccttcctcccttcctcctgcc 141
             |||||||||||||||||||||
Sbjct: 12357 ccttcctcccttcctcctgcc 12337
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>gb|AC083900.6| Homo sapiens BAC clone RP11-372C13 from 2, complete sequence
          Length = 155161

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 121   ccttcctcccttcctcctgcc 141
             |||||||||||||||||||||
Sbjct: 35069 ccttcctcccttcctcctgcc 35089
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>gb|AY166859.1| Homo sapiens TGS2 mRNA, complete cds
          Length = 2138

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 121 ccttcctcccttcctcctgccgggcgcggccgg 153
           ||||||||||||||||| ||| ||| |||||||
Sbjct: 339 ccttcctcccttcctcccgcccggctcggccgg 371
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>dbj|AP001686.1| Homo sapiens genomic DNA, chromosome 21q, section 30/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 121    ccttcctcccttcctcctgcc 141
              |||||||||||||||||||||
Sbjct: 319809 ccttcctcccttcctcctgcc 319789
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>gb|AC147994.4| Mus musculus BAC clone RP24-338F2 from 6, complete sequence
          Length = 215213

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   ccttcctcccttcctcctgcc 141
             |||||||||||||||||||||
Sbjct: 90755 ccttcctcccttcctcctgcc 90735
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>gb|AC146300.4| Mus musculus BAC clone RP23-38L11 from 3, complete sequence
          Length = 261825

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 121   ccttcctcccttcctcctgcc 141
             |||||||||||||||||||||
Sbjct: 89252 ccttcctcccttcctcctgcc 89272
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>dbj|AP001253.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B658E16,
            LL56-APP region, complete sequence
          Length = 140249

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 121  ccttcctcccttcctcctgcc 141
            |||||||||||||||||||||
Sbjct: 9614 ccttcctcccttcctcctgcc 9594
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>dbj|AB034704.1| Rubrivivax gelatinosus photosynthetic gene cluster, complete cds,
             stain:IL144
          Length = 58996

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 100   ccgcggccacggcgcgcgcca 120
             |||||||||||||||||||||
Sbjct: 52200 ccgcggccacggcgcgcgcca 52220
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>ref|XM_477707.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 387

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 141 cgggcgcggccggcgggcggcagg 164
           |||||||||||||||| |||||||
Sbjct: 178 cgggcgcggccggcggtcggcagg 201
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>gb|AY621988.1| Ischadium recurvum voucher UMMZ 300126.6 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 441

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 14  acactcgctcgctccctccc 33
           ||||||||||||||||||||
Sbjct: 253 acactcgctcgctccctccc 272
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>gb|AY621987.1| Ischadium recurvum voucher UMMZ 300128.2 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 441

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 14  acactcgctcgctccctccc 33
           ||||||||||||||||||||
Sbjct: 253 acactcgctcgctccctccc 272
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>gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0009F15,
              complete sequence
          Length = 142289

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 141    cgggcgcggccggcgggcggcagg 164
              |||||||||||||||| |||||||
Sbjct: 113676 cgggcgcggccggcggccggcagg 113699
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 137     ctgccgggcgcggccggcgg 156
               ||||||||||||||||||||
Sbjct: 3166640 ctgccgggcgcggccggcgg 3166621
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 185     ccgcgcggcgacgtcgagccccaa 208
               ||||||||||||||||||| ||||
Sbjct: 3035633 ccgcgcggcgacgtcgagcgccaa 3035656
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 140     ccgggcgcggccggcgggcg 159
               ||||||||||||||||||||
Sbjct: 2939603 ccgggcgcggccggcgggcg 2939584
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 137     ctgccgggcgcggccggcgg 156
               ||||||||||||||||||||
Sbjct: 1634325 ctgccgggcgcggccggcgg 1634344
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>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14
          Length = 307550

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 185    ccgcgcggcgacgtcgagccccaa 208
              ||||||||||||||||||| ||||
Sbjct: 179834 ccgcgcggcgacgtcgagcgccaa 179857
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>ref|XM_850321.1| PREDICTED: Canis familiaris similar to CASK-interacting protein
           CIP98 (LOC612588), mRNA
          Length = 2817

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 ggccggcgggcggcaggagg 167
           ||||||||||||||||||||
Sbjct: 432 ggccggcgggcggcaggagg 413
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>gb|AC123034.5| Mus musculus BAC clone RP24-484E17 from chromosome 13, complete sequence
          Length = 177675

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    cttcctcccttcctcctgcc 141
              ||||||||||||||||||||
Sbjct: 172880 cttcctcccttcctcctgcc 172899
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>gb|AC183690.3| Cavia porcellus clone CH234-212D11, complete sequence
          Length = 108490

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 117    gccaccttcctcccttcctcctgc 140
              ||||||||||||||| ||||||||
Sbjct: 106981 gccaccttcctccctccctcctgc 107004
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>ref|NM_003828.2| Homo sapiens myotubularin related protein 1 (MTMR1), mRNA
          Length = 2732

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 ggccggcgggcggcaggagg 167
           ||||||||||||||||||||
Sbjct: 197 ggccggcgggcggcaggagg 216
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>gb|AC165156.3| Mus musculus BAC clone RP23-298I7 from chromosome 9, complete sequence
          Length = 198962

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    cttcctcccttcctcctgcc 141
              ||||||||||||||||||||
Sbjct: 190772 cttcctcccttcctcctgcc 190791
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>gb|AC175208.3| Cavia porcellus clone CH234-14J14, complete sequence
          Length = 140345

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   gccaccttcctcccttcctcctgc 140
             ||||||||||||||| ||||||||
Sbjct: 58888 gccaccttcctccctccctcctgc 58911
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>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13
          Length = 346051

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 185    ccgcgcggcgacgtcgagccccaa 208
              ||||||||||||||||||| ||||
Sbjct: 267662 ccgcgcggcgacgtcgagcgccaa 267685
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>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   gggcgcggccggcgggcggc 161
             ||||||||||||||||||||
Sbjct: 60361 gggcgcggccggcgggcggc 60380
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 140     ccgggcgcggccggcgggcg 159
               ||||||||||||||||||||
Sbjct: 1118129 ccgggcgcggccggcgggcg 1118110
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 137     ctgccgggcgcggccggcgg 156
               ||||||||||||||||||||
Sbjct: 1521428 ctgccgggcgcggccggcgg 1521447
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>gb|BC032947.1| Homo sapiens myotubularin related protein 1, mRNA (cDNA clone
           MGC:33194 IMAGE:4837744), complete cds
          Length = 1472

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 ggccggcgggcggcaggagg 167
           ||||||||||||||||||||
Sbjct: 226 ggccggcgggcggcaggagg 245
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>emb|AJ224979.1|HSA224979 Homo sapiens mRNA for MTMR1 protein
          Length = 2582

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 ggccggcgggcggcaggagg 167
           ||||||||||||||||||||
Sbjct: 55  ggccggcgggcggcaggagg 74
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>gb|AC092999.3| Homo sapiens 3 BAC RP11-170K4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167084

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   ccaccttcctcccttcctcc 137
             ||||||||||||||||||||
Sbjct: 87750 ccaccttcctcccttcctcc 87769
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>gb|AC078917.14| Homo sapiens 12q BAC RP1-78O14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 121008

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   accttcctcccttcctcctg 139
             ||||||||||||||||||||
Sbjct: 86073 accttcctcccttcctcctg 86054
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>gb|AC008387.6| Homo sapiens chromosome 5 clone CTC-229P9, complete sequence
          Length = 142715

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   cgggcgcggccggcgggcgg 160
             ||||||||||||||||||||
Sbjct: 77018 cgggcgcggccggcgggcgg 77037
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    ccgggcgcggccggcgggcg 159
              ||||||||||||||||||||
Sbjct: 712793 ccgggcgcggccggcgggcg 712774
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 141     cgggcgcggccggcgggcggcagg 164
               |||||||||||||||| |||||||
Sbjct: 4462313 cgggcgcggccggcggccggcagg 4462336
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 141      cgggcgcggccggcgggcggcagg 164
                |||||||||||||||| |||||||
Sbjct: 13379933 cgggcgcggccggcggtcggcagg 13379910
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>gb|AC016614.6|AC016614 Homo sapiens chromosome 5 clone CTD-2217F15, complete sequence
          Length = 109314

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   ccttcctcccttcctcctgc 140
             ||||||||||||||||||||
Sbjct: 74824 ccttcctcccttcctcctgc 74805
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>gb|AC024166.3|AC024166 Homo sapiens chromosome 3 clone RP11-429F16 map 3p, complete sequence
          Length = 174868

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   ccaccttcctcccttcctcc 137
             ||||||||||||||||||||
Sbjct: 59528 ccaccttcctcccttcctcc 59547
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>gb|AC156837.2| Mus musculus BAC clone RP23-18K24 from chromosome 9, complete sequence
          Length = 205623

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    cttcctcccttcctcctgcc 141
              ||||||||||||||||||||
Sbjct: 111173 cttcctcccttcctcctgcc 111192
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>gb|AF002223.2| Homo sapiens chromosome X multiple clones map q28, complete sequence
          Length = 209932

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    ggccggcgggcggcaggagg 167
              ||||||||||||||||||||
Sbjct: 108170 ggccggcgggcggcaggagg 108189
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>gb|AC114290.2| Homo sapiens chromosome 5 clone CTD-3062C19, complete sequence
          Length = 76144

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   ccaccttcctcccttcctcc 137
             ||||||||||||||||||||
Sbjct: 34956 ccaccttcctcccttcctcc 34975
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>gb|AC083855.3| Homo sapiens chromosome 3 clone RP11-622I12 map 3p, complete sequence
          Length = 190861

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   ccaccttcctcccttcctcc 137
             ||||||||||||||||||||
Sbjct: 43338 ccaccttcctcccttcctcc 43357
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>dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1123_B01
          Length = 105736

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 141   cgggcgcggccggcgggcggcagg 164
             |||||||||||||||| |||||||
Sbjct: 94371 cgggcgcggccggcggtcggcagg 94348
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>dbj|AP004349.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0684A03
          Length = 64705

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 141  cgggcgcggccggcgggcggcagg 164
            |||||||||||||||| |||||||
Sbjct: 5692 cgggcgcggccggcggtcggcagg 5669
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 103     cggccacggcgcgcgccacc 122
               ||||||||||||||||||||
Sbjct: 1218728 cggccacggcgcgcgccacc 1218709
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>gb|AF057354.1|AF057354 Homo sapiens myotubularin-related protein 1a mRNA, partial cds
          Length = 2792

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 ggccggcgggcggcaggagg 167
           ||||||||||||||||||||
Sbjct: 53  ggccggcgggcggcaggagg 72
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 135     tcctgccgggcgcggccggcgggc 158
               ||||||| ||||||||||||||||
Sbjct: 2185318 tcctgcccggcgcggccggcgggc 2185295
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 141     cgggcgcggccggcgggcggcagg 164
               |||||||||||||||| |||||||
Sbjct: 4471007 cgggcgcggccggcggccggcagg 4471030
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>gb|AC140840.3| Mus musculus BAC clone RP24-545K17 from 13, complete sequence
          Length = 178416

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     gctcgctccctccccaccgc 39
              ||||||||||||||||||||
Sbjct: 123617 gctcgctccctccccaccgc 123598
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>gb|AC133188.4| Mus musculus BAC clone RP23-330F6 from 13, complete sequence
          Length = 201730

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   cttcctcccttcctcctgcc 141
             ||||||||||||||||||||
Sbjct: 51004 cttcctcccttcctcctgcc 51023
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>gb|AC142414.3| Mus musculus BAC clone RP23-372N15 from 8, complete sequence
          Length = 192261

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    cttcctcccttcctcctgcc 141
              ||||||||||||||||||||
Sbjct: 144174 cttcctcccttcctcctgcc 144155
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>gb|AD000002.1|MSGY154 Mycobacterium tuberculosis sequence from clone y154
          Length = 40221

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 185   ccgcgcggcgacgtcgagccccaa 208
             ||||||||||||||||||| ||||
Sbjct: 24642 ccgcgcggcgacgtcgagcgccaa 24619
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>gb|AC139379.4| Mus musculus BAC clone RP23-233P1 from chromosome 3, complete sequence
          Length = 168532

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   cttcctcccttcctcctgcc 141
             ||||||||||||||||||||
Sbjct: 37037 cttcctcccttcctcctgcc 37056
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>gb|AC161053.5| Mus musculus BAC clone RP23-381G13 from chromosome 3, complete sequence
          Length = 205395

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   cttcctcccttcctcctgcc 141
             ||||||||||||||||||||
Sbjct: 61114 cttcctcccttcctcctgcc 61095


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,934,081
Number of Sequences: 3902068
Number of extensions: 1934081
Number of successful extensions: 65397
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63867
Number of HSP's gapped (non-prelim): 1529
length of query: 292
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 270
effective length of database: 17,147,199,772
effective search space: 4629743938440
effective search space used: 4629743938440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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