ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet76c04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF490473.1| Hordeum vulgare subsp. vulgare cultivar Igri CONSTANS-like protein (CO3) gene, complete cds Length = 1283 Score = 545 bits (275), Expect = e-152 Identities = 275/275 (100%) Strand = Plus / Plus Query: 199 acctcgcgaccggcgatgatcaaggccgagccggacctccgtggccagctgcgcggcagc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 acctcgcgaccggcgatgatcaaggccgagccggacctccgtggccagctgcgcggcagc 60 Query: 259 gctggcgtcggcggcatgcagctgcagcagcgctgcgactcgtgccgctcggcgccgtgc 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gctggcgtcggcggcatgcagctgcagcagcgctgcgactcgtgccgctcggcgccgtgc 120 Query: 319 gcgttctactgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcac 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgttctactgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcac 180 Query: 379 tcggcgaacacgctggccagccgccaccgccgcgtcccgatgggcgcggtggccccggcc 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tcggcgaacacgctggccagccgccaccgccgcgtcccgatgggcgcggtggccccggcc 240 Query: 439 tcccctgccggaggcgccttcgtcgtccgccccgg 473 ||||||||||||||||||||||||||||||||||| Sbjct: 241 tcccctgccggaggcgccttcgtcgtccgccccgg 275
>gb|AF490472.1| Hordeum vulgare subsp. vulgare cultivar Morex CONSTANS-like protein (CO3) mRNA, complete cds Length = 1148 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Plus Query: 209 cggcgatgatcaaggccgagccggacctccgtggccagctgcgcggcagcgctggcgtcg 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 cggcgatgatcaaggccgagccggacctccgtggccagctgcgcggcagcgctggcgtcg 64 Query: 269 gcggcatgcagctgcagcagcgctgcgactcgtgccgctcggcgccgtgcgcgttctact 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 gcggcatgcagctgcagcagcgctgcgactcgtgccgctcggcgccgtgcgcgttctact 124 Query: 329 gccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaaca 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 gccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaaca 184 Query: 389 cgctggccagccgccaccgccgcgtcccgatgggcgcggtggccccggcctcccctgccg 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 cgctggccagccgccaccgccgcgtcccgatgggcgcggtggccccggcctcccctgccg 244 Query: 449 gaggcgccttcgtcgtccgccccgg 473 ||||||||||||||||||||||||| Sbjct: 245 gaggcgccttcgtcgtccgccccgg 269
>gb|AF490471.1| Hordeum vulgare subsp. vulgare cultivar CI16155 CONSTANS-like protein (CO3) mRNA, complete cds Length = 1171 Score = 517 bits (261), Expect = e-143 Identities = 261/261 (100%) Strand = Plus / Plus Query: 213 gatgatcaaggccgagccggacctccgtggccagctgcgcggcagcgctggcgtcggcgg 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gatgatcaaggccgagccggacctccgtggccagctgcgcggcagcgctggcgtcggcgg 60 Query: 273 catgcagctgcagcagcgctgcgactcgtgccgctcggcgccgtgcgcgttctactgccg 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 catgcagctgcagcagcgctgcgactcgtgccgctcggcgccgtgcgcgttctactgccg 120 Query: 333 cgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgct 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgct 180 Query: 393 ggccagccgccaccgccgcgtcccgatgggcgcggtggccccggcctcccctgccggagg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggccagccgccaccgccgcgtcccgatgggcgcggtggccccggcctcccctgccggagg 240 Query: 453 cgccttcgtcgtccgccccgg 473 ||||||||||||||||||||| Sbjct: 241 cgccttcgtcgtccgccccgg 261
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 159 bits (80), Expect = 1e-35 Identities = 134/152 (88%) Strand = Plus / Minus Query: 280 ctgcagcagcgctgcgactcgtgccgctcggcgccgtgcgcgttctactgccgcgccgac 339 |||| |||||| |||||||||||||| |||||||||||||||||||| |||| |||||| Sbjct: 3010220 ctgccgcagcggtgcgactcgtgccggtcggcgccgtgcgcgttctattgcctcgccgat 3010161 Query: 340 tcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgctggccagc 399 |||||||||||||| ||| |||||||||| ||||||||||| | ||| ||||||| || Sbjct: 3010160 tcggcggcgctctgtgccacgtgcgacgctgacgtgcactccgtcaacccgctggcacgc 3010101 Query: 400 cgccaccgccgcgtcccgatgggcgcggtggc 431 |||||||||||||| || ||||||| |||||| Sbjct: 3010100 cgccaccgccgcgtaccaatgggcgtggtggc 3010069
>dbj|AP005560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1178_D01 Length = 121768 Score = 159 bits (80), Expect = 1e-35 Identities = 134/152 (88%) Strand = Plus / Minus Query: 280 ctgcagcagcgctgcgactcgtgccgctcggcgccgtgcgcgttctactgccgcgccgac 339 |||| |||||| |||||||||||||| |||||||||||||||||||| |||| |||||| Sbjct: 30186 ctgccgcagcggtgcgactcgtgccggtcggcgccgtgcgcgttctattgcctcgccgat 30127 Query: 340 tcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgctggccagc 399 |||||||||||||| ||| |||||||||| ||||||||||| | ||| ||||||| || Sbjct: 30126 tcggcggcgctctgtgccacgtgcgacgctgacgtgcactccgtcaacccgctggcacgc 30067 Query: 400 cgccaccgccgcgtcccgatgggcgcggtggc 431 |||||||||||||| || ||||||| |||||| Sbjct: 30066 cgccaccgccgcgtaccaatgggcgtggtggc 30035
>dbj|AB001887.1| Oryza sativa (japonica cultivar-group) cDNA for zinc finger protein, complete cds, clone:S12569 Length = 1361 Score = 159 bits (80), Expect = 1e-35 Identities = 134/152 (88%) Strand = Plus / Plus Query: 280 ctgcagcagcgctgcgactcgtgccgctcggcgccgtgcgcgttctactgccgcgccgac 339 |||| |||||| |||||||||||||| |||||||||||||||||||| |||| |||||| Sbjct: 59 ctgccgcagcggtgcgactcgtgccggtcggcgccgtgcgcgttctattgcctcgccgat 118 Query: 340 tcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgctggccagc 399 |||||||||||||| ||| |||||||||| ||||||||||| | ||| ||||||| || Sbjct: 119 tcggcggcgctctgtgccacgtgcgacgctgacgtgcactccgtcaacccgctggcacgc 178 Query: 400 cgccaccgccgcgtcccgatgggcgcggtggc 431 |||||||||||||| || ||||||| |||||| Sbjct: 179 cgccaccgccgcgtaccaatgggcgtggtggc 210
>gb|AY082958.1| Hordeum vulgare CONSTANS-like protein CO5 (CO5) gene, complete cds Length = 1060 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 327 ctgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaa 386 ||||||||||||| | || |||||||||||| |||||||||| ||| | ||||| || || Sbjct: 243 ctgccgcgccgacgccgctgcgctctgcgccacgtgcgacgccgacatccactccgccaa 302 Query: 387 cacgctggccagccgccacc 406 | |||| ||||||||||||| Sbjct: 303 cccgctcgccagccgccacc 322
>gb|DQ157460.1| Oryza sativa (indica cultivar-group) strain Suphan Buri 1 Hd1 gene, complete cds Length = 4717 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 328 tgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaac 387 |||||||||||| | || ||||| |||| |||||||||| | | |||||||| |||||| Sbjct: 1582 tgccgcgccgacgccgccgcgctgtgcgtggcgtgcgacgtgcaggtgcactccgcgaac 1641 Query: 388 acgctggccagccgccaccgccgcgtccc 416 |||| ||||| ||||||| |||||||| Sbjct: 1642 ccgctcgccaggcgccaccagcgcgtccc 1670
>gb|DQ157459.1| Oryza sativa (indica cultivar-group) strain KDML 105 Hd1 gene, complete cds Length = 4716 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 328 tgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaac 387 |||||||||||| | || ||||| |||| |||||||||| | | |||||||| |||||| Sbjct: 1582 tgccgcgccgacgccgccgcgctgtgcgtggcgtgcgacgtgcaggtgcactccgcgaac 1641 Query: 388 acgctggccagccgccaccgccgcgtccc 416 |||| ||||| ||||||| |||||||| Sbjct: 1642 ccgctcgccaggcgccaccagcgcgtccc 1670
>dbj|AB041839.1| Oryza sativa (indica cultivar-group) Hd1 gene, complete cds, strain:Kasalath Length = 4793 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 328 tgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaac 387 |||||||||||| | || ||||| |||| |||||||||| | | |||||||| |||||| Sbjct: 1571 tgccgcgccgacgccgccgcgctgtgcgtggcgtgcgacgtgcaggtgcactccgcgaac 1630 Query: 388 acgctggccagccgccaccgccgcgtccc 416 |||| ||||| ||||||| |||||||| Sbjct: 1631 ccgctcgccaggcgccaccagcgcgtccc 1659
>ref|XM_506861.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1476_F05.18 mRNA Length = 1388 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 343 gcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgct 392 |||||||| |||||||| |||||||| ||| | |||||||||||| |||| Sbjct: 366 gcggcgctgtgcgccgcctgcgacgccgacatccactcggcgaacccgct 415
>ref|XM_466669.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1386 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 343 gcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgct 392 |||||||| |||||||| |||||||| ||| | |||||||||||| |||| Sbjct: 368 gcggcgctgtgcgccgcctgcgacgccgacatccactcggcgaacccgct 417
>ref|XM_469510.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1266 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 358 gcgtgcgacgcggacgtgcactcggcgaacacgctggc 395 |||||||||||| |||||||||||||||| ||||||| Sbjct: 124 gcgtgcgacgcgtccgtgcactcggcgaacccgctggc 161
>gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01 map R1538, complete sequence Length = 142712 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 358 gcgtgcgacgcggacgtgcactcggcgaacacgctggc 395 |||||||||||| |||||||||||||||| ||||||| Sbjct: 20814 gcgtgcgacgcgtccgtgcactcggcgaacccgctggc 20777
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 358 gcgtgcgacgcggacgtgcactcggcgaacacgctggc 395 |||||||||||| |||||||||||||||| ||||||| Sbjct: 28392228 gcgtgcgacgcgtccgtgcactcggcgaacccgctggc 28392265 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 398 gccgccaccgccgcgtcccgat 419 |||||||||||||||||||||| Sbjct: 6992774 gccgccaccgccgcgtcccgat 6992753
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 358 gcgtgcgacgcggacgtgcactcggcgaacacgctggc 395 |||||||||||| |||||||||||||||| ||||||| Sbjct: 28483552 gcgtgcgacgcgtccgtgcactcggcgaacccgctggc 28483589 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 398 gccgccaccgccgcgtcccgat 419 |||||||||||||||||||||| Sbjct: 6990669 gccgccaccgccgcgtcccgat 6990648
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 343 gcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgct 392 |||||||| |||||||| |||||||| ||| | |||||||||||| |||| Sbjct: 24009561 gcggcgctgtgcgccgcctgcgacgccgacatccactcggcgaacccgct 24009610 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 gccgccaccgccgcgtcccg 417 |||||||||||||||||||| Sbjct: 25411960 gccgccaccgccgcgtcccg 25411979
>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1476_F05 Length = 125426 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 343 gcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgct 392 |||||||| |||||||| |||||||| ||| | |||||||||||| |||| Sbjct: 44599 gcggcgctgtgcgccgcctgcgacgccgacatccactcggcgaacccgct 44648
>dbj|AK120563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132M18, full insert sequence Length = 1841 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 358 gcgtgcgacgcggacgtgcactcggcgaacacgctggc 395 |||||||||||| |||||||||||||||| ||||||| Sbjct: 200 gcgtgcgacgcgtccgtgcactcggcgaacccgctggc 237
>dbj|AK100097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004D12, full insert sequence Length = 1386 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 343 gcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgct 392 |||||||| |||||||| |||||||| ||| | |||||||||||| |||| Sbjct: 368 gcggcgctgtgcgccgcctgcgacgccgacatccactcggcgaacccgct 417
>dbj|AK058536.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-B01, full insert sequence Length = 1388 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 343 gcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgct 392 |||||||| |||||||| |||||||| ||| | |||||||||||| |||| Sbjct: 366 gcggcgctgtgcgccgcctgcgacgccgacatccactcggcgaacccgct 415
>dbj|AB041842.1| Oryza sativa Hd1 gene, complete cds, strain:HS110 Length = 5283 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Plus Query: 328 tgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaac 387 |||||||||||| | || ||||| |||| |||||||||| | | ||| |||| |||||| Sbjct: 1592 tgccgcgccgacgccgccgcgctgtgcgtggcgtgcgacgtgcaggtgtactccgcgaac 1651 Query: 388 acgctggccagccgccaccgccgcgtccc 416 |||| ||||| ||||||| |||||||| Sbjct: 1652 ccgctcgccaggcgccaccagcgcgtccc 1680
>dbj|AB041841.1| Oryza sativa Hd1 gene, complete cds, strain:HS66 Length = 4807 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Plus Query: 328 tgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaac 387 |||||||||||| | || ||||| |||| |||||||||| | | ||| |||| |||||| Sbjct: 1592 tgccgcgccgacgccgccgcgctgtgcgtggcgtgcgacgtgcaggtgtactccgcgaac 1651 Query: 388 acgctggccagccgccaccgccgcgtccc 416 |||| ||||| ||||||| |||||||| Sbjct: 1652 ccgctcgccaggcgccaccagcgcgtccc 1680
>dbj|AB041840.1| Oryza sativa Hd1 gene, complete cds, strain:Ginbouzu Length = 4850 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Plus Query: 328 tgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaac 387 |||||||||||| | || ||||| |||| |||||||||| | | ||| |||| |||||| Sbjct: 1592 tgccgcgccgacgccgccgcgctgtgcgtggcgtgcgacgtgcaggtgtactccgcgaac 1651 Query: 388 acgctggccagccgccaccgccgcgtccc 416 |||| ||||| ||||||| |||||||| Sbjct: 1652 ccgctcgccaggcgccaccagcgcgtccc 1680
>ref|XM_473042.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1002 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 327 ctgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcg 369 ||||||||||||| ||||| |||||||||| |||||||||| Sbjct: 99 ctgccgcgccgacgcggcgttcctctgcgccgggtgcgacgcg 141 Score = 40.1 bits (20), Expect = 6.4 Identities = 50/60 (83%) Strand = Plus / Plus Query: 346 gcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgctggccagccgccac 405 |||||||||||||| |||||||| ||| | ||||| || ||| |||| || |||||||| Sbjct: 238 gcgctctgcgccgcctgcgacgccgacatccactccgccaacccgctcgcgcgccgccac 297
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 327 ctgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcg 369 ||||||||||||| ||||| |||||||||| |||||||||| Sbjct: 24865442 ctgccgcgccgacgcggcgttcctctgcgccgggtgcgacgcg 24865484 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 ggccagccgccaccgccgcg 412 |||||||||||||||||||| Sbjct: 25739486 ggccagccgccaccgccgcg 25739505 Score = 40.1 bits (20), Expect = 6.4 Identities = 50/60 (83%) Strand = Plus / Plus Query: 346 gcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgctggccagccgccac 405 |||||||||||||| |||||||| ||| | ||||| || ||| |||| || |||||||| Sbjct: 24865581 gcgctctgcgccgcctgcgacgccgacatccactccgccaacccgctcgcgcgccgccac 24865640
>dbj|AK121024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049O11, full insert sequence Length = 1396 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 327 ctgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcg 369 ||||||||||||| ||||| |||||||||| |||||||||| Sbjct: 225 ctgccgcgccgacgcggcgttcctctgcgccgggtgcgacgcg 267 Score = 40.1 bits (20), Expect = 6.4 Identities = 50/60 (83%) Strand = Plus / Plus Query: 346 gcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgctggccagccgccac 405 |||||||||||||| |||||||| ||| | ||||| || ||| |||| || |||||||| Sbjct: 364 gcgctctgcgccgcctgcgacgccgacatccactccgccaacccgctcgcgcgccgccac 423
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 327 ctgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcg 369 ||||||||||||| ||||| |||||||||| |||||||||| Sbjct: 127158 ctgccgcgccgacgcggcgttcctctgcgccgggtgcgacgcg 127200 Score = 40.1 bits (20), Expect = 6.4 Identities = 50/60 (83%) Strand = Plus / Plus Query: 346 gcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgctggccagccgccac 405 |||||||||||||| |||||||| ||| | ||||| || ||| |||| || |||||||| Sbjct: 127297 gcgctctgcgccgcctgcgacgccgacatccactccgccaacccgctcgcgcgccgccac 127356
>gb|AC136716.12| Mus musculus, clone RP23-42E21, complete sequence Length = 259603 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 44 gaaaaccaaaccagatcaaaacacag 69 ||||||||||| |||||||||||||| Sbjct: 134112 gaaaaccaaactagatcaaaacacag 134087
>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11, complete sequence Length = 123620 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 398 gccgccaccgccgcgtcccgat 419 |||||||||||||||||||||| Sbjct: 89591 gccgccaccgccgcgtcccgat 89612
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11, complete sequence Length = 166072 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 398 gccgccaccgccgcgtcccgat 419 |||||||||||||||||||||| Sbjct: 159371 gccgccaccgccgcgtcccgat 159350
>gb|AC101911.9| Mus musculus chromosome 19, clone RP24-374E20, complete sequence Length = 118431 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 41 gacgaaaaccaaaccagatcaaaaca 66 |||||||||||||||| ||||||||| Sbjct: 88398 gacgaaaaccaaaccaaatcaaaaca 88423
>dbj|AK110980.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-C08, full insert sequence Length = 1456 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 398 gccgccaccgccgcgtcccgat 419 |||||||||||||||||||||| Sbjct: 334 gccgccaccgccgcgtcccgat 313
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 270 cggcatgcagctgcagcagcgc 291 |||||||||||||||||||||| Sbjct: 4717834 cggcatgcagctgcagcagcgc 4717813
>ref|NM_186092.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1140 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tactgccgcgccgactcggcg 345 ||||||||||||||||||||| Sbjct: 103 tactgccgcgccgactcggcg 123
>ref|NM_185797.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1188 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 328 tgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaac 387 |||||||||||| | || ||||| |||| |||||||||| | | |||||||| |||||| Sbjct: 268 tgccgcgccgacgccgccgcgctgtgcgtggcgtgcgacgtgcaggtgcactccgcgaac 327 Query: 388 acgct 392 |||| Sbjct: 328 ccgct 332
>ref|XM_805014.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053510367.10) partial mRNA Length = 10404 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 gctgcgcggcagcgctggcgt 266 ||||||||||||||||||||| Sbjct: 1172 gctgcgcggcagcgctggcgt 1192
>ref|XM_809726.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053508061.50) partial mRNA Length = 10371 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 gctgcgcggcagcgctggcgt 266 ||||||||||||||||||||| Sbjct: 1172 gctgcgcggcagcgctggcgt 1192
>ref|XM_815092.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053510307.330) partial mRNA Length = 10464 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 gctgcgcggcagcgctggcgt 266 ||||||||||||||||||||| Sbjct: 1235 gctgcgcggcagcgctggcgt 1255
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 gccgcgccgactcggcggcgc 349 ||||||||||||||||||||| Sbjct: 232972 gccgcgccgactcggcggcgc 232952
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 ggcgtcggcggcatgcagctg 282 ||||||||||||||||||||| Sbjct: 198328 ggcgtcggcggcatgcagctg 198348
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 407 gccgcgtcccgatgggcgcgg 427 ||||||||||||||||||||| Sbjct: 9529 gccgcgtcccgatgggcgcgg 9509
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 325 tactgccgcgccgactcggcg 345 ||||||||||||||||||||| Sbjct: 28134081 tactgccgcgccgactcggcg 28134061 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 ctggccagccgccaccgccgc 411 ||||||||||||||||||||| Sbjct: 13726553 ctggccagccgccaccgccgc 13726573
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 328 tgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaac 387 |||||||||||| | || ||||| |||| |||||||||| | | |||||||| |||||| Sbjct: 9347619 tgccgcgccgacgccgccgcgctgtgcgtggcgtgcgacgtgcaggtgcactccgcgaac 9347678 Query: 388 acgct 392 |||| Sbjct: 9347679 ccgct 9347683 Score = 40.1 bits (20), Expect = 6.4 Identities = 59/72 (81%) Strand = Plus / Minus Query: 334 gccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgctg 393 |||||| | |||| |||||||||||| |||||||| ||| | ||| || ||| ||||| Sbjct: 26460742 gccgacgccgcggtgctctgcgccgcctgcgacgccgacatccacgacgccaacccgctg 26460683 Query: 394 gccagccgccac 405 ||| |||||||| Sbjct: 26460682 gcccgccgccac 26460671
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 328 tgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaac 387 |||||||||||| | || ||||| |||| |||||||||| | | |||||||| |||||| Sbjct: 114960 tgccgcgccgacgccgccgcgctgtgcgtggcgtgcgacgtgcaggtgcactccgcgaac 115019 Query: 388 acgct 392 |||| Sbjct: 115020 ccgct 115024
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 328 tgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaac 387 |||||||||||| | || ||||| |||| |||||||||| | | |||||||| |||||| Sbjct: 76029 tgccgcgccgacgccgccgcgctgtgcgtggcgtgcgacgtgcaggtgcactccgcgaac 76088 Query: 388 acgct 392 |||| Sbjct: 76089 ccgct 76093
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 325 tactgccgcgccgactcggcg 345 ||||||||||||||||||||| Sbjct: 117377 tactgccgcgccgactcggcg 117357
>dbj|AP004298.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409D09 Length = 150485 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 ctggccagccgccaccgccgc 411 ||||||||||||||||||||| Sbjct: 77545 ctggccagccgccaccgccgc 77565
>dbj|AP005690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0052I14 Length = 168285 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 ctggccagccgccaccgccgc 411 ||||||||||||||||||||| Sbjct: 11717 ctggccagccgccaccgccgc 11737
>dbj|AK120101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022K23, full insert sequence Length = 1548 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tactgccgcgccgactcggcg 345 ||||||||||||||||||||| Sbjct: 185 tactgccgcgccgactcggcg 205
>gb|AY616065.1| Prototheca wickerhamii plasmid acetyl-CoA carboxylase biotin carboxylase subunit-like mRNA, partial sequence Length = 606 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 240 tggccagctgcgcggcagcgctggc 264 |||||||||||||| |||||||||| Sbjct: 148 tggccagctgcgcgccagcgctggc 172
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 237 ccgtggccagctgcgcggcagcgctggcg 265 ||||||||||| || |||||||||||||| Sbjct: 4848128 ccgtggccagcagcccggcagcgctggcg 4848156
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 280 ctgcagcagcgctgcgactcgtgccgctcggcg 312 |||||||||||||||| | |||||| ||||||| Sbjct: 2345139 ctgcagcagcgctgcgtcgcgtgccactcggcg 2345107
>dbj|AB041838.1| Oryza sativa (japonica cultivar-group) mRNA for Hd1, complete cds Length = 1557 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 328 tgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaac 387 |||||||||||| | || ||||| |||| |||||||||| | | |||||||| |||||| Sbjct: 427 tgccgcgccgacgccgccgcgctgtgcgtggcgtgcgacgtgcaggtgcactccgcgaac 486 Query: 388 acgct 392 |||| Sbjct: 487 ccgct 491
>dbj|AB041837.1| Oryza sativa (japonica cultivar-group) gene for Hd1, complete cds Length = 4814 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 328 tgccgcgccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaac 387 |||||||||||| | || ||||| |||| |||||||||| | | |||||||| |||||| Sbjct: 1592 tgccgcgccgacgccgccgcgctgtgcgtggcgtgcgacgtgcaggtgcactccgcgaac 1651 Query: 388 acgct 392 |||| Sbjct: 1652 ccgct 1656
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 actcgtgccgctcggcgccg 315 |||||||||||||||||||| Sbjct: 1046087 actcgtgccgctcggcgccg 1046068
>ref|XM_466909.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1587 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 gccgccaccgccgcgtcccg 417 |||||||||||||||||||| Sbjct: 493 gccgccaccgccgcgtcccg 512
>ref|XM_612560.2| PREDICTED: Bos taurus similar to Wnt-1 proto-oncogene protein precursor (LOC540662), mRNA Length = 1843 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 gccgccaccgccgcgtcccg 417 |||||||||||||||||||| Sbjct: 611 gccgccaccgccgcgtcccg 630
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gatcaaggccgagccggacc 235 |||||||||||||||||||| Sbjct: 1599207 gatcaaggccgagccggacc 1599188
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 cgtgccgctcggcgccgtgcgcgt 322 ||||||||||||||| |||||||| Sbjct: 2975038 cgtgccgctcggcgctgtgcgcgt 2975015
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 280 ctgcagcagcgctgcgactcgtgccgctcggc 311 |||||||||||||||| | |||||| |||||| Sbjct: 2800840 ctgcagcagcgctgcgtcgcgtgccactcggc 2800871 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 cgtgccgctcggcgccgtgcgcgt 322 |||||||||||||| ||||||||| Sbjct: 2494423 cgtgccgctcggcgacgtgcgcgt 2494400
>gb|AC138792.2| Mus musculus BAC clone RP23-235I2 from chromosome 8, complete sequence Length = 181841 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 aaaaccaaaccagatcaaaacaca 68 ||||||||||||||||||| |||| Sbjct: 164744 aaaaccaaaccagatcaaaccaca 164721
>ref|XM_543686.2| PREDICTED: Canis familiaris similar to Wnt-1 proto-oncogene protein precursor (LOC486560), mRNA Length = 1866 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 gccgccaccgccgcgtcccg 417 |||||||||||||||||||| Sbjct: 637 gccgccaccgccgcgtcccg 656
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gcatgcagctgcagcagcgc 291 |||||||||||||||||||| Sbjct: 3796310 gcatgcagctgcagcagcgc 3796329
>ref|NM_005430.2| Homo sapiens wingless-type MMTV integration site family, member 1 (WNT1), mRNA Length = 2368 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 gccgccaccgccgcgtcccg 417 |||||||||||||||||||| Sbjct: 110 gccgccaccgccgcgtcccg 129
>emb|CR688001.2|CNS0FTT9 Tetraodon nigroviridis full-length cDNA Length = 1008 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 264 cgtcggcggcatgcagctgcagcagcgc 291 ||||||| | |||||||||||||||||| Sbjct: 665 cgtcggccggatgcagctgcagcagcgc 638
>emb|CR683184.2|CNS0FQ3G Tetraodon nigroviridis full-length cDNA Length = 653 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 264 cgtcggcggcatgcagctgcagcagcgc 291 ||||||| | |||||||||||||||||| Sbjct: 221 cgtcggccggatgcagctgcagcagcgc 194
>gb|AC154993.9| Mus musculus chromosome 3, clone RP23-246L14, complete sequence Length = 208416 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 gccagccgccaccgccgcgtcccg 417 |||||||||| ||||||||||||| Sbjct: 81346 gccagccgccgccgccgcgtcccg 81323
>emb|AL096868.15|HSJ493D19 Human DNA sequence from clone RP3-493D19 on chromosome 6q14.3-16.1 Contains part of the RNGTT gene for RNA guanylyltransferase and 5'-phosphatase (mRNA capping enzyme, CAP1A), complete sequence Length = 151761 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctgcaccctgctgcgctccagcct 102 |||||||||||||| ||||||||| Sbjct: 53258 ctgcaccctgctgcactccagcct 53235
>gb|AC159971.4| Mus musculus chromosome 5, clone RP23-263G19, complete sequence Length = 163375 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 ggaggtgagtgggggtacag 148 |||||||||||||||||||| Sbjct: 132932 ggaggtgagtgggggtacag 132951
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 cgtgccgctcggcgccgtgcgcgt 322 ||||||||||||||| |||||||| Sbjct: 1153598 cgtgccgctcggcgctgtgcgcgt 1153575
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 280 ctgcagcagcgctgcgactcgtgccgctcggc 311 |||||||||||||||| | |||||| |||||| Sbjct: 2541081 ctgcagcagcgctgcgtcgcgtgccactcggc 2541112 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 cgtgccgctcggcgccgtgcgcgt 322 |||||||||||||| ||||||||| Sbjct: 1888218 cgtgccgctcggcgacgtgcgcgt 1888241
>emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0070J16, complete sequence Length = 130718 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 ggccagccgccaccgccgcg 412 |||||||||||||||||||| Sbjct: 119213 ggccagccgccaccgccgcg 119232
>emb|CR749163.11| Zebrafish DNA sequence from clone CH211-216B21 in linkage group 5, complete sequence Length = 189369 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 catgcagctgcagcagcgct 292 |||||||||||||||||||| Sbjct: 177757 catgcagctgcagcagcgct 177738
>emb|BX927252.5| Zebrafish DNA sequence from clone CH211-212O10 in linkage group 5, complete sequence Length = 176261 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 catgcagctgcagcagcgct 292 |||||||||||||||||||| Sbjct: 50876 catgcagctgcagcagcgct 50895
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ctcgcgaccggcgatgatca 220 |||||||||||||||||||| Sbjct: 3414943 ctcgcgaccggcgatgatca 3414962
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcgtcggcggcatgcagctg 282 |||||||||||||||||||| Sbjct: 1338033 gcgtcggcggcatgcagctg 1338052
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 cagccgccaccgccgcgtcc 415 |||||||||||||||||||| Sbjct: 286557 cagccgccaccgccgcgtcc 286538
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 gccggaggcgccttcgtcgtccgc 468 |||||||||||| ||||||||||| Sbjct: 1229238 gccggaggcgccgtcgtcgtccgc 1229215
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 agcgctgcgactcgtgccgctcgg 310 ||||||||| |||||||||||||| Sbjct: 45460 agcgctgcggctcgtgccgctcgg 45437
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 cgtgccgctcggcgccgtgcgcgt 322 ||||||||||||||| |||||||| Sbjct: 1474318 cgtgccgctcggcgctgtgcgcgt 1474341
>gb|AC073610.17| Homo sapiens 12 BAC RP11-302B13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104593 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 gccgccaccgccgcgtcccg 417 |||||||||||||||||||| Sbjct: 96634 gccgccaccgccgcgtcccg 96653
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 gatcgacctcgcgaccggcg 213 |||||||||||||||||||| Sbjct: 3983303 gatcgacctcgcgaccggcg 3983322
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcctgtgcggcgggtgaact 188 |||||||||||||||||||| Sbjct: 85587 gcctgtgcggcgggtgaact 85606
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cgccgcgtgcgacgcggacg 373 |||||||||||||||||||| Sbjct: 5090590 cgccgcgtgcgacgcggacg 5090571
>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0709F06 Length = 170964 Score = 40.1 bits (20), Expect = 6.4 Identities = 59/72 (81%) Strand = Plus / Minus Query: 334 gccgactcggcggcgctctgcgccgcgtgcgacgcggacgtgcactcggcgaacacgctg 393 |||||| | |||| |||||||||||| |||||||| ||| | ||| || ||| ||||| Sbjct: 72781 gccgacgccgcggtgctctgcgccgcctgcgacgccgacatccacgacgccaacccgctg 72722 Query: 394 gccagccgccac 405 ||| |||||||| Sbjct: 72721 gcccgccgccac 72710
>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1643_A10 Length = 130037 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 gccgccaccgccgcgtcccg 417 |||||||||||||||||||| Sbjct: 67622 gccgccaccgccgcgtcccg 67641
>dbj|AK119876.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-F07, full insert sequence Length = 2955 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 atgcagctgcagcagcgctg 293 |||||||||||||||||||| Sbjct: 1110 atgcagctgcagcagcgctg 1129
>emb|AJ328578.1|HSA328578 Homo sapiens genomic sequence surrounding NotI site, clone NR1-PG18R Length = 744 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 ctcggcggcgctctgcgccg 358 |||||||||||||||||||| Sbjct: 334 ctcggcggcgctctgcgccg 315
>ref|NM_208713.1| Eremothecium gossypii ACL044Wp (ACL044W), mRNA Length = 1542 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 cagccgccaccgccgcgtcc 415 |||||||||||||||||||| Sbjct: 250 cagccgccaccgccgcgtcc 231
>dbj|AK063500.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-E03, full insert sequence Length = 1587 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 gccgccaccgccgcgtcccg 417 |||||||||||||||||||| Sbjct: 493 gccgccaccgccgcgtcccg 512
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ctcgcgaccggcgatgatca 220 |||||||||||||||||||| Sbjct: 3408435 ctcgcgaccggcgatgatca 3408454
>emb|AJ532411.1|ETR532411 Euglena tristella partial 18S rRNA gene, strain SAG 1224-35 Length = 2215 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cggtggccccggcctcccct 444 |||||||||||||||||||| Sbjct: 1147 cggtggccccggcctcccct 1166
>emb|AL731630.2|OSJN00273 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072M01, complete sequence Length = 127712 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 ggccagccgccaccgccgcg 412 |||||||||||||||||||| Sbjct: 62412 ggccagccgccaccgccgcg 62431
>dbj|AP002956.1| Homo sapiens genomic DNA, chromosome 11q clone:R1105h09, complete sequence Length = 219574 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 cagctgcagcagcgctgcga 296 |||||||||||||||||||| Sbjct: 184616 cagctgcagcagcgctgcga 184597
>gb|AC109165.11| Mus musculus chromosome 5, clone RP23-30B3, complete sequence Length = 202377 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 ggaggtgagtgggggtacag 148 |||||||||||||||||||| Sbjct: 189283 ggaggtgagtgggggtacag 189264
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 cgcggtggccccggcctccc 442 |||||||||||||||||||| Sbjct: 2652906 cgcggtggccccggcctccc 2652925
>emb|X03072.1|HSINT1G Human int-1 mammary oncogene Length = 4522 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 gccgccaccgccgcgtcccg 417 |||||||||||||||||||| Sbjct: 376 gccgccaccgccgcgtcccg 395
>gb|AC025256.33| Homo sapiens 12 BAC RP11-437F8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 53829 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 gccgccaccgccgcgtcccg 417 |||||||||||||||||||| Sbjct: 7956 gccgccaccgccgcgtcccg 7937 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,021,790 Number of Sequences: 3902068 Number of extensions: 3021790 Number of successful extensions: 86905 Number of sequences better than 10.0: 99 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 83024 Number of HSP's gapped (non-prelim): 3877 length of query: 473 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 451 effective length of database: 17,147,199,772 effective search space: 7733387097172 effective search space used: 7733387097172 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
