ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet76c03 |
|---|---|
| Clone Library Name | barley_pub |
>SUMF1_MOUSE (Q8R0F3) Sulfatase-modifying factor 1 precursor| (C-alpha-formyglycine-generating enzyme 1) Length = 372 Score = 33.5 bits (75), Expect = 0.31 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 5/98 (5%) Frame = +1 Query: 205 IKAEEAFKALQVAIKCRNSAGEYESKAVGALDGTGAFSVPLAADLHGADCVAQLHSAASN 384 I+ F L +A + S + +L G+ P A HG+ AQ +S +N Sbjct: 14 IRLARVFLLLVLACEVAGSDEAEAREGAASLAGSCGCGTPQRAGAHGSSAAAQRYSREAN 73 Query: 385 AP--CPGQEP---SKIVPVSEGTTYGVVAGDTPPRRRD 483 AP G P +K+VP+ G + D P R+D Sbjct: 74 APGLTSGPRPLALTKMVPIPAGVF--TMGTDDPQIRQD 109
>SUMF1_HUMAN (Q8NBK3) Sulfatase-modifying factor 1 precursor| (C-alpha-formyglycine-generating enzyme 1) Length = 374 Score = 30.8 bits (68), Expect = 2.0 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 15/97 (15%) Frame = +1 Query: 232 LQVAIKCRNSAGEYES---KAVGALDGTGAFSVPLAADLHGADCVAQLHSAASNA--PCP 396 L +++ C +AG E+ G+L G+ P HG+ A +S +NA P P Sbjct: 23 LLLSLLC-GAAGSQEAGTGAGAGSLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGPVP 81 Query: 397 GQEP---SKIVPVSEGT-TYGV------VAGDTPPRR 477 G+ SK+VP+ G T G G+ P RR Sbjct: 82 GERQLAHSKMVPIPAGVFTMGTDDPQIKQDGEAPARR 118
>SEC14_YARLI (P45816) SEC14 cytosolic factor| (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PC TP) Length = 492 Score = 30.4 bits (67), Expect = 2.7 Identities = 18/42 (42%), Positives = 24/42 (57%) Frame = -1 Query: 407 GSWPGHGALEAALWSCATQSAPWRSAARGTLKAPVPSRAPTA 282 G+ GA AA S + Q+AP ++A KAPVP+ A TA Sbjct: 346 GTAAAGGAAAAAGASSSKQAAPAQAAPAQAAKAPVPAAAKTA 387
>TEGU_EBV (P03186) Large tegument protein| Length = 3149 Score = 30.4 bits (67), Expect = 2.7 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%) Frame = +1 Query: 217 EAFKALQVAIKCRNSAGEYESKAVGALDGTGAFSVPLAADLHGADCVAQLHSAASNAPCP 396 ++F A + + NS + A A + + AA A A SAA + P Sbjct: 316 DSFPAARYSPAKTNSPPSSPASAAPASAAPASAAPASAAPASAAPASAAPASAAPASAAP 375 Query: 397 GQEPSKIVPV-SEGTTYGVVAGDTPPR 474 P +P+ G T GV A TPPR Sbjct: 376 ASSPPLFIPIPGLGHTPGVPAPSTPPR 402
>RL22_METAC (Q8TRU2) 50S ribosomal protein L22P| Length = 151 Score = 29.6 bits (65), Expect = 4.5 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 4/101 (3%) Frame = +1 Query: 190 CTGKNIKAEEAFKALQVAIKCRNSAGEYESKAVGALDGTGAFSVPLAADLH----GADCV 357 C K +KA EA K L+ I + + + DG+G P+AA + + + Sbjct: 35 CKIKGMKASEARKFLEDVIAMKQAVPFKKHH-----DGSGHRKGPMAAGKYPISASKEIL 89 Query: 358 AQLHSAASNAPCPGQEPSKIVPVSEGTTYGVVAGDTPPRRR 480 L +A SNA G EP+ + + G V PR R Sbjct: 90 KVLKNAESNAEYKGLEPANMYIIHAAIQRGRVIHGFMPRAR 130
>ACBD4_PONPY (Q5R7P6) Acyl-CoA-binding domain-containing protein 4| Length = 269 Score = 29.3 bits (64), Expect = 5.9 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -1 Query: 380 EAALWSCATQSAPWRSAARGTLKAPVPSRAPTALLSYS 267 EAA + + APW AR L PV R P AL + S Sbjct: 217 EAAAQAQCSAMAPWAPRARAALLPPVALRRPVALPNVS 254
>POLS_RUBVM (P08563) Structural polyprotein [Contains: Nucleocapsid protein C;| Membrane glycoprotein E2; Membrane glycoprotein E1] Length = 992 Score = 28.9 bits (63), Expect = 7.7 Identities = 19/57 (33%), Positives = 22/57 (38%) Frame = -1 Query: 458 PATTP*VVPSDTGTILDGSWPGHGALEAALWSCATQSAPWRSAARGTLKAPVPSRAP 288 P TP V P G+W + WS A R +R AP PSRAP Sbjct: 49 PEMTPAVTPEGPAPPRTGAW------QRKDWSRAPPPPEERQESRSQTPAPKPSRAP 99
>TRPE_AZOBR (P50872) Anthranilate synthase (EC 4.1.3.27) [Includes: Glutamine| amidotransferase] Length = 732 Score = 28.9 bits (63), Expect = 7.7 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 9/52 (17%) Frame = +1 Query: 286 VGALDGTGAFSVPLAAD-LHGADCVAQLH--------SAASNAPCPGQEPSK 414 + AL+G G +P A+ L G + +A L S+AS AP PG+E S+ Sbjct: 87 IDALNGRGQVLLPAVAEALRGLEALAGLEEAPSRVTASSASPAPLPGEERSR 138
>HEM3_LEIXX (Q6AHF1) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 329 Score = 28.9 bits (63), Expect = 7.7 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Frame = +1 Query: 265 GEYESKAVGALDGTGAFSVPLAADLHGADCVAQLHSAAS--NAPCPG 399 G+ +++ L GTG F+ L L +C +HS AP PG Sbjct: 53 GDTSRESLSELGGTGVFATALRDALRNGECDLVVHSLKDLPTAPAPG 99
>ANF_CAVPO (P27596) Atrial natriuretic factor precursor (ANF) (Atrial| natriuretic peptide) (ANP) (Prepronatriodilatin) [Contains: Cardiodilatin-related peptide (CDP)] (Fragment) Length = 128 Score = 28.9 bits (63), Expect = 7.7 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 8/41 (19%) Frame = -1 Query: 404 SWPGH--------GALEAALWSCATQSAPWRSAARGTLKAP 306 SWPG GAL W + +SAP +S R L AP Sbjct: 57 SWPGEAGPAQREGGALGRGPWDSSDRSAPLKSKLRALLDAP 97
>AGLU_ASPNG (P56526) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| Length = 985 Score = 28.9 bits (63), Expect = 7.7 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Frame = +1 Query: 313 FSVPLAADLHGADCVAQL---HSAASNAPCPGQEPSKIVPVSEGTTYGVVAGDTP 468 F++P +AD+ GA +A + +A + + CPG + SK+ S G T + P Sbjct: 35 FTIPASADV-GAQLIANIDDPQAADAQSVCPGYKASKVQHNSRGFTASLQLAGRP 88 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.133 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,355,126 Number of Sequences: 219361 Number of extensions: 843889 Number of successful extensions: 3518 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3396 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3516 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
