ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet76c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip ... 166 4e-41
2CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chiti... 160 1e-39
3RUAP_SOYBN (P39657) RuBisCO-associated protein 55 8e-08
4CHIX_STROI (Q05638) Exochitinase 1 precursor (EC 3.2.1.14) 42 9e-04
5CHIB_SERMA (P11797) Chitinase B precursor (EC 3.2.1.14) 42 0.001
6SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,... 37 0.036
7CHIT_CAEEL (Q11174) Probable endochitinase (EC 3.2.1.14) 35 0.14
8CHIT3_DROME (Q9W5U2) Probable chitinase 3 (EC 3.2.1.14) 35 0.14
9RS15_YEAST (Q01855) 40S ribosomal protein S15 (S21) (YS21) (RP52... 33 0.53
10Y2598_MYCBO (P65010) Hypothetical protein Mb2598c 33 0.53
11Y2568_MYCTU (P65009) Hypothetical protein Rv2568c/MT2644 33 0.53
12CH47_DROME (Q23997) Chitinase-like protein DS47 precursor 32 1.2
13EBA2_FLAME (P36912) Endo-beta-N-acetylglucosaminidase F2 precurs... 31 1.5
14CHIT2_DROME (Q9W092) Probable chitinase 2 precursor (EC 3.2.1.14) 31 2.0
15RAI1_HUMAN (Q7Z5J4) Retinoic acid-induced protein 1 30 4.4
16MTRC_METKA (O32865) Tetrahydromethanopterin S-methyltransferase ... 30 4.4
17IDGF2_DROME (Q9V3D4) Chitinase-like protein Idgf2 precursor (Ima... 30 4.4
18CHIT1_HUMAN (Q13231) Chitotriosidase-1 precursor (EC 3.2.1.14) (... 29 5.8
19RS15_ELAOL (Q945U1) 40S ribosomal protein S15 29 7.6
20RS15D_ARATH (Q9FY64) 40S ribosomal protein S15-4 29 7.6
21RS151_ARATH (Q08112) 40S ribosomal protein S15-1 29 7.6
22CHIT_MANSE (P36362) Endochitinase precursor (EC 3.2.1.14) 29 7.6
23CHIA1_BACCI (P20533) Chitinase A1 precursor (EC 3.2.1.14) 29 7.6
24RS15_PICMA (O65059) 40S ribosomal protein S15 29 7.6
25AROC_PROAC (Q6A8I4) Chorismate synthase (EC 4.2.3.5) (5-enolpyru... 28 9.9
26NQO2_PARDE (P29914) NADH-quinone oxidoreductase chain 2 (EC 1.6.... 28 9.9
27FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.... 28 9.9

>CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb|
           chitinase-1) (TBC-1)
          Length = 314

 Score =  166 bits (419), Expect = 4e-41
 Identities = 84/152 (55%), Positives = 107/152 (70%)
 Frame = +1

Query: 31  IAMTNGYLFREYIGAQFTGVRFSDVPVNTGVSFHYILAFAIDYTPVAQKPTPTPTNGAFS 210
           + +T+  +FREYIG+QF  V+FSDVP+N  V FH+ILAFAIDYT      +PTPTNG F 
Sbjct: 21  LPLTSALVFREYIGSQFNDVKFSDVPINPDVDFHFILAFAIDYT---SGSSPTPTNGNFK 77

Query: 211 AFWDTASLSRADVAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSR 390
            FWDT +LS + VAA+K  H NV V + LGGDSV     V F+P+SV SWV NAV+SL+R
Sbjct: 78  PFWDTNNLSPSQVAAVKRTHSNVKVSLSLGGDSVGG-KNVFFSPSSVSSWVENAVSSLTR 136

Query: 391 LINEYGLDGVDVDYERFATGVSVDTFVECAGR 486
           +I +Y LDG+D+DYE F      +TF EC G+
Sbjct: 137 IIKQYHLDGIDIDYEHFKG--DPNTFAECIGQ 166



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>CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)|
          Length = 275

 Score =  160 bits (406), Expect = 1e-39
 Identities = 84/145 (57%), Positives = 104/145 (71%)
 Frame = +1

Query: 52  LFREYIGAQFTGVRFSDVPVNTGVSFHYILAFAIDYTPVAQKPTPTPTNGAFSAFWDTAS 231
           LFREYIGAQF  V+FSDVP+N  V FH+ILAFAIDYT      +PTPTNG F+ FWDT +
Sbjct: 2   LFREYIGAQFNDVKFSDVPINPNVDFHFILAFAIDYT---SGSSPTPTNGNFNPFWDTNN 58

Query: 232 LSRADVAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSRLINEYGL 411
           LS + VAAIK  + NV V V LGG+SV    +V F P+SV SWV NAV+SL+++I +Y L
Sbjct: 59  LSPSQVAAIKRTYNNVKVSVSLGGNSVGG-ERVFFNPSSVSSWVDNAVSSLTKIIKQYHL 117

Query: 412 DGVDVDYERFATGVSVDTFVECAGR 486
           DG+D+DYE F      +TF EC G+
Sbjct: 118 DGIDIDYEHFKG--DPNTFAECIGQ 140



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>RUAP_SOYBN (P39657) RuBisCO-associated protein|
          Length = 283

 Score = 55.5 bits (132), Expect = 8e-08
 Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
 Frame = +1

Query: 103 VPVNTGVSFHYILAFAIDYTPVAQKPTPTPTNGAFSAFWDTASLSRADVAAIKAAHP--- 273
           +P N    F   L+ A DY           TNG F  +WDT  ++   +   K  +    
Sbjct: 22  IPENI-TEFQVTLSLARDYDG------NNSTNGKFIPYWDTEKVTPEVIKKFKKKYEPTA 74

Query: 274 -NVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSRLINEYGLDGVDVDYERFA 444
             V V+V +G  + Q    +    NS ++WV+ A ASL  +I  Y LDG+DV YE  A
Sbjct: 75  LRVKVLVSIGNKNKQFPFTIGSDSNS-EAWVSEATASLKSIIKTYNLDGIDVSYEDIA 131



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>CHIX_STROI (Q05638) Exochitinase 1 precursor (EC 3.2.1.14)|
          Length = 597

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 28/182 (15%)
 Frame = +1

Query: 1   LTPRPAPARSIAMTNGY------LFREYIGAQFTGVRFSDVPVNTGVSF-HYILAFAIDY 159
           LTP  A A  +A  NG              A  TG   +D+P +  V + H   A    Y
Sbjct: 221 LTPDTAYAFQVAAVNGAGESAKSATVTATTAPGTGGGSADLPPHALVGYLHASFANGSGY 280

Query: 160 TPVAQKPTPTPTNGAFSAFWDTASLSRADV--------------------AAIKAAHP-N 276
           T +A  P          AF +  S++  D+                    AAIKA     
Sbjct: 281 TRLADVPDSWDVIDL--AFGEPTSVTSGDIRFDRCPATECPNVESDAEFKAAIKAKQAAG 338

Query: 277 VSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSRLINEYGLDGVDVDYERFATGVS 456
             V++ +GG + Q  +  + A ++        V+S+S++I+EYGLDG+D+D+E  +  ++
Sbjct: 339 KKVLISIGGQNGQVQLTTTAARDTF-------VSSVSKIIDEYGLDGLDIDFEGHSLSLN 391

Query: 457 VD 462
            D
Sbjct: 392 AD 393



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>CHIB_SERMA (P11797) Chitinase B precursor (EC 3.2.1.14)|
          Length = 499

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
 Frame = +1

Query: 196 NGAFSAFWDTAS--LSRADVA----AIKAAHPNVSVMVGLGGDSVQDIVKVSFAP--NSV 351
           N      WD A+      DV     A+KA +P++ +M  +GG    + + VS A   N+V
Sbjct: 55  NSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAV 114

Query: 352 DSWVANA--VASLSRLINEYGLDGVDVDYERFATGVSVDTFV 471
            +  A      S  R++ +YG DGVD+D+E +     VD F+
Sbjct: 115 KTPAARTKFAQSCVRIMKDYGFDGVDIDWE-YPQAAEVDGFI 155



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>SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,|
            arginine/serine-rich 2-interacting protein)
            (SC35-interacting protein 1) (CTD-associated SR protein
            11) (Splicing regulatory protein 129) (SRrp129)
            (NY-REN-40 antigen)
          Length = 1148

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
 Frame = +1

Query: 7    PRPAPARSIAMTNGYLFREYIGAQFTGVRFSDVPVNTGVSFHYILAFAIDYTPVAQKPTP 186
            P P P++ +          YI +Q  G +   +P ++ VS +         TPV   PT 
Sbjct: 966  PPPPPSQQV---------NYIASQPDGKQLQGIPSSSHVSNNMS-------TPVLPAPTA 1009

Query: 187  TPTN-----GAFSAFWDTASLSRADVAAIKAAHPNVSVMVGLGGDS 309
             P N     G  S    ++S S+A  AA+K A   VSV V    DS
Sbjct: 1010 APGNTGMVQGPSSGNTSSSSHSKASNAAVKLAESKVSVAVEASADS 1055



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>CHIT_CAEEL (Q11174) Probable endochitinase (EC 3.2.1.14)|
          Length = 617

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 10/148 (6%)
 Frame = +1

Query: 22  ARSIAM---TNGYLFREYIG--AQFTGVRFSDVPVN--TGVSFHYILAFA---IDYTPVA 171
           +RS+A    TN Y+   Y    AQ+   R   VP +   G+  H + AF     DYT  A
Sbjct: 41  SRSVARSEPTNSYIRPCYFTNWAQYRQGRAKFVPEDYTPGLCTHILFAFGWMNADYTVRA 100

Query: 172 QKPTPTPTNGAFSAFWDTASLSRADVAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSV 351
             P   P +      W    + R  V  +K     +  ++  GG S    +    A +S 
Sbjct: 101 YDPADLPND------WAGEGMYRR-VNKLKVTDTQLKTLLSFGGWSFGTALFQGMAASSA 153

Query: 352 DSWVANAVASLSRLINEYGLDGVDVDYE 435
              V   + S    +  +G DG+D+D+E
Sbjct: 154 SRKVF--IDSAITFVRTWGFDGIDIDWE 179



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>CHIT3_DROME (Q9W5U2) Probable chitinase 3 (EC 3.2.1.14)|
          Length = 458

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
 Frame = +1

Query: 40  TNGYLFREYIGAQFTGVRFSDVPVNTGVSFHYILAFAI-DYTPVAQKPTPTPTNGAFSAF 216
           TN   +R+ IG      RF+   +NT +  H I  FA+ DY+ +  +           ++
Sbjct: 180 TNWAWYRKGIG------RFTPDDINTELCTHVIYGFAVLDYSELVLR--------THDSW 225

Query: 217 WDTASLSRADVAAIKAAHPNVSVMVGLGGDSVQD-IVKVSFAPNSVDSWVANAVASLSRL 393
            D  +     V ++K+    VS+ +G   DS  D   ++  +P +   +V +A+      
Sbjct: 226 ADVENNFYTRVTSLKSKGIKVSLALGGWNDSQGDKYSRLVRSPMARSRFVRHAL----EF 281

Query: 394 INEYGLDGVDVDYE 435
           I +YG +G+D+D+E
Sbjct: 282 IEKYGFEGLDLDWE 295



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>RS15_YEAST (Q01855) 40S ribosomal protein S15 (S21) (YS21) (RP52) (RIG|
           protein)
          Length = 142

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = +1

Query: 10  RPAPARSIAMTNGYLFREYIGAQ---FTGVRFSDVPVNTGVSFHYILAFAIDYTPV 168
           +PAP R+  M N  +  E IG+    + G  F+ V +   +  HY+  F+I YTPV
Sbjct: 72  KPAPVRT-HMRNMIIVPEMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPV 126



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>Y2598_MYCBO (P65010) Hypothetical protein Mb2598c|
          Length = 341

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 21/55 (38%), Positives = 27/55 (49%)
 Frame = -2

Query: 353 STELGAKETLTMSCTLSPPRPTMTLTFGCAALMAATSARDRLAVSQNALNAPLVG 189
           S +LG    L  SC L+  RP+ T T G A    A  A+ RL    + L  P+VG
Sbjct: 62  SDQLGG---LCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVG 113



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>Y2568_MYCTU (P65009) Hypothetical protein Rv2568c/MT2644|
          Length = 341

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 21/55 (38%), Positives = 27/55 (49%)
 Frame = -2

Query: 353 STELGAKETLTMSCTLSPPRPTMTLTFGCAALMAATSARDRLAVSQNALNAPLVG 189
           S +LG    L  SC L+  RP+ T T G A    A  A+ RL    + L  P+VG
Sbjct: 62  SDQLGG---LCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVG 113



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>CH47_DROME (Q23997) Chitinase-like protein DS47 precursor|
          Length = 452

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
 Frame = +1

Query: 247 VAAIKAAHPNVSVMVGLGGDSVQDIVK-VSFAPNSVDSWVANA------VASLSRLINEY 405
           V  +K  +PNV +++ +GGD   ++ K     PN     + +       V ++  L+  Y
Sbjct: 96  VTRLKRKYPNVKILLSVGGDKDIELDKDAKELPNKYLELLESPTGRTRFVNTVYSLVKTY 155

Query: 406 GLDGVDVDYE 435
           G DG+DV ++
Sbjct: 156 GFDGLDVAWQ 165



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>EBA2_FLAME (P36912) Endo-beta-N-acetylglucosaminidase F2 precursor (EC|
           3.2.1.96) (Mannosyl-glycoprotein
           endo-beta-N-acetyl-glucosaminidase F2)
           (Di-N-acetylchitobiosyl beta-N-acetylglucosaminidase F2)
           (Endoglycosidase F2)
          Length = 335

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 32/113 (28%), Positives = 43/113 (38%), Gaps = 7/113 (6%)
 Frame = +1

Query: 154 DYTPVAQKPTPTPTNGAFSAFWDTASLS-------RADVAAIKAAHPNVSVMVGLGGDSV 312
           DYTP        P N    A+W+T   +       R     I     N +   G G DS+
Sbjct: 98  DYTP--------PEN----AYWNTLKTNYVPYLHKRGTKVIITLGDLNSATTTG-GQDSI 144

Query: 313 QDIVKVSFAPNSVDSWVANAVASLSRLINEYGLDGVDVDYERFATGVSVDTFV 471
                 S+A    D WV            EY LDG+D+D E   +G ++  FV
Sbjct: 145 G---YSSWAKGIYDKWVG-----------EYNLDGIDIDIESSPSGATLTKFV 183



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>CHIT2_DROME (Q9W092) Probable chitinase 2 precursor (EC 3.2.1.14)|
          Length = 484

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 16/63 (25%), Positives = 32/63 (50%)
 Frame = +1

Query: 247 VAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSRLINEYGLDGVDV 426
           +  +K +HP++ V + +GG +       +   N++       V  +S  I +Y  DG+D+
Sbjct: 108 MTGLKRSHPHLKVSLAIGGWNEGSANYSTLVANNLLR--GRFVKQVSSFIRKYNFDGLDL 165

Query: 427 DYE 435
           D+E
Sbjct: 166 DWE 168



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>RAI1_HUMAN (Q7Z5J4) Retinoic acid-induced protein 1|
          Length = 1906

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 163 PVAQKPTPTPTNGAFSAFWDTASLSRADVA 252
           P    P P PT  AF  F DT + S AD A
Sbjct: 712 PTLGVPAPDPTTAAFDCFPDTTAASSADSA 741



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>MTRC_METKA (O32865) Tetrahydromethanopterin S-methyltransferase subunit C (EC|
           2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M
           methyltransferase subunit C)
          Length = 270

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = +1

Query: 217 WDTASLSRADVAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASL 384
           W   ++ R     +    P++  M GLGG SV  I+  + + N+V +W A  + ++
Sbjct: 63  WGADAVRRVAGYGLGTGVPSIGFM-GLGGGSVAAILAAALSGNTVPAWAAAIIGTV 117



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>IDGF2_DROME (Q9V3D4) Chitinase-like protein Idgf2 precursor (Imaginal disk|
           growth factor protein 2)
          Length = 440

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
 Frame = +1

Query: 241 ADVAAIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWV----------ANAVASLSR 390
           ++V ++K  +P++ V++ +GGD   D       P+  + ++             + S   
Sbjct: 85  SEVTSLKRKYPHLKVLLSVGGDHDID-------PDHPNKYIDLLEGEKVRQIGFIRSAYD 137

Query: 391 LINEYGLDGVDVDYE 435
           L+  YG DG+D+ Y+
Sbjct: 138 LVKTYGFDGLDLAYQ 152



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>CHIT1_HUMAN (Q13231) Chitotriosidase-1 precursor (EC 3.2.1.14) (Chitinase-1)|
          Length = 466

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = +1

Query: 217 WDTASLSRADVAAIKAAHPNVSVMVGLGGDS--VQDIVKVSFAPNSVDSWVANAVASLSR 390
           W+  +L + +   +K  +P +  ++ +GG +   Q    +    N+  ++V +A+    R
Sbjct: 71  WNDETLYQ-EFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAI----R 125

Query: 391 LINEYGLDGVDVDYE 435
            + +Y  DG+D+D+E
Sbjct: 126 FLRKYSFDGLDLDWE 140



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>RS15_ELAOL (Q945U1) 40S ribosomal protein S15|
          Length = 153

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +1

Query: 10  RPAPARSIAMTNGYLFREYIGA---QFTGVRFSDVPVNTGVSFHYILAFAIDYTPV 168
           +P P R+  + N  +  E IG+    + G  F+ V +   +  HY+  F+I Y PV
Sbjct: 80  KPEPVRT-HLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPV 134



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>RS15D_ARATH (Q9FY64) 40S ribosomal protein S15-4|
          Length = 152

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +1

Query: 10  RPAPARSIAMTNGYLFREYIGA---QFTGVRFSDVPVNTGVSFHYILAFAIDYTPV 168
           +P P R+  + N  +  E IG+    + G  F+ V +   +  HY+  F+I Y PV
Sbjct: 79  KPEPVRT-HLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPV 133



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>RS151_ARATH (Q08112) 40S ribosomal protein S15-1|
          Length = 152

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +1

Query: 10  RPAPARSIAMTNGYLFREYIGA---QFTGVRFSDVPVNTGVSFHYILAFAIDYTPV 168
           +P P R+  + N  +  E IG+    + G  F+ V +   +  HY+  F+I Y PV
Sbjct: 79  KPEPVRT-HLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPV 133



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>CHIT_MANSE (P36362) Endochitinase precursor (EC 3.2.1.14)|
          Length = 554

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 17/61 (27%), Positives = 34/61 (55%)
 Frame = +1

Query: 253 AIKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSRLINEYGLDGVDVDY 432
           +++++HP+V  MV +GG   +   K S    +  S   + + S+   + +Y  DG+D+D+
Sbjct: 88  SLRSSHPSVKFMVAVGG-WAEGSSKYSHMV-AQKSTRMSFIRSVVSFLKKYDFDGLDLDW 145

Query: 433 E 435
           E
Sbjct: 146 E 146



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>CHIA1_BACCI (P20533) Chitinase A1 precursor (EC 3.2.1.14)|
          Length = 699

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +1

Query: 256 IKAAHPNVSVMVGLGGDSVQDIVKVSFAPNSVDSWVANAVASLSRLINEYGLDGVDVDYE 435
           +K  +PN+  ++ +GG +  +      A  +     AN+     R   +Y  DGVD+D+E
Sbjct: 148 LKQTNPNLKTIISVGGWTWSNRFSDVAATAATREVFANSAVDFLR---KYNFDGVDLDWE 204

Query: 436 RFATG 450
              +G
Sbjct: 205 YPVSG 209



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>RS15_PICMA (O65059) 40S ribosomal protein S15|
          Length = 151

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +1

Query: 10  RPAPARSIAMTNGYLFREYIGA---QFTGVRFSDVPVNTGVSFHYILAFAIDYTPV 168
           +P P R+  + N  +  E IG+    + G  F+ V +   +  HY+  F+I Y PV
Sbjct: 78  KPEPVRT-HLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPV 132



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>AROC_PROAC (Q6A8I4) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 398

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 27/92 (29%), Positives = 35/92 (38%)
 Frame = +1

Query: 118 GVSFHYILAFAIDYTPVAQKPTPTPTNGAFSAFWDTASLSRADVAAIKAAHPNVSVMVGL 297
           G+S   IL       P+A  P   PT    +     A   R+DV A+ AA      M  L
Sbjct: 301 GMSTGQILRVRAAMKPIATVPRALPTVDVTTGEAANAHHQRSDVCAVPAAGVVAEAMAAL 360

Query: 298 GGDSVQDIVKVSFAPNSVDSWVANAVASLSRL 393
               + +     F  +SV     NA A L RL
Sbjct: 361 ---VLAECALEKFGGDSVTETRRNAQAYLDRL 389



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>NQO2_PARDE (P29914) NADH-quinone oxidoreductase chain 2 (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain 2) (NDH-1, chain 2)
          Length = 239

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 21/61 (34%), Positives = 31/61 (50%)
 Frame = +1

Query: 139 LAFAIDYTPVAQKPTPTPTNGAFSAFWDTASLSRADVAAIKAAHPNVSVMVGLGGDSVQD 318
           LA  ID     + P P P NG FSA       + AD+   +A + +V+  + L GDS++ 
Sbjct: 162 LAALIDRFAAGEVPVPGPQNGRFSAEALGGPTALADLKGGEAHNASVARALRL-GDSIKR 220

Query: 319 I 321
           I
Sbjct: 221 I 221



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>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 21/83 (25%), Positives = 36/83 (43%)
 Frame = +1

Query: 154 DYTPVAQKPTPTPTNGAFSAFWDTASLSRADVAAIKAAHPNVSVMVGLGGDSVQDIVKVS 333
           DY PV QK +  P   A    W T S  R +      ++    + V LGG   ++I+   
Sbjct: 436 DYDPV-QKISIIPRGRAGGLTWFTPSEDRMESGLYSRSYLQNQMAVALGGRIAEEII--- 491

Query: 334 FAPNSVDSWVANAVASLSRLINE 402
           F    V +  +N +  ++R+  +
Sbjct: 492 FGEEEVTTGASNDLQQVARVARQ 514


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,804,167
Number of Sequences: 219361
Number of extensions: 724674
Number of successful extensions: 2944
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2936
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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