ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet76b08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1S17P_WHEAT (P46285) Sedoheptulose-1,7-bisphosphatase, chloroplas... 126 1e-29
2TX1B_PHOKE (P84063) Neurotoxin PKTx1B (Fragment) 30 1.1
3AKAP8_RAT (Q63014) A-kinase anchor protein 8 (A-kinase anchor pr... 30 1.9
4AKAP8_MOUSE (Q9DBR0) A-kinase anchor protein 8 (A-kinase anchor ... 30 1.9
5AKAP8_HUMAN (O43823) A-kinase anchor protein 8 (A-kinase anchor ... 29 2.4
6DBPA_HUMAN (P16989) DNA-binding protein A (Cold shock domain-con... 29 2.4
7TXL1_PHONI (P17727) Lethal neurotoxin Tx1 precursor 29 3.2
8CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 ... 29 3.2
9SC5A5_RAT (Q63008) Sodium/iodide cotransporter (Na(+)/I(-) cotra... 29 3.2
10AKAP8_CANFA (Q5VK71) A-kinase anchor protein 8 (A-kinase anchor ... 29 3.2
11ISPDF_RHOCA (Q08113) IspD/ispF bifunctional enzyme [Includes: 2-... 28 4.2
12ZN687_MOUSE (Q9D2D7) Zinc finger protein 687 28 4.2
13KR171_HUMAN (Q9BYP8) Keratin-associated protein 17-1 (Keratin as... 27 9.3
14DYNA_DROME (P13496) 150 kDa dynein-associated polypeptide (DP-15... 27 9.3
15ZN687_HUMAN (Q8N1G0) Zinc finger protein 687 27 9.3

>S17P_WHEAT (P46285) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor|
           (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase)
           (SED(1,7)P2ase)
          Length = 393

 Score =  126 bits (316), Expect = 1e-29
 Identities = 62/63 (98%), Positives = 63/63 (100%)
 Frame = +3

Query: 183 TRSPACCAAMSFSQSYRPKAARPATSFHGESLRANTARTSFPAGRQSKAASRAALTTRCA 362
           TRSPACCAAMSFSQSYRPKAARPATSF+GESLRANTARTSFPAGRQSKAASRAALTTRCA
Sbjct: 15  TRSPACCAAMSFSQSYRPKAARPATSFYGESLRANTARTSFPAGRQSKAASRAALTTRCA 74

Query: 363 IGD 371
           IGD
Sbjct: 75  IGD 77



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>TX1B_PHOKE (P84063) Neurotoxin PKTx1B (Fragment)|
          Length = 78

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 107 DEEGGYGAWDCGSCSTSLRCGAGWGIW 27
           D E   GA +C  C   + C  GWG W
Sbjct: 10  DHECDGGASNCNCCGDDVYCACGWGRW 36



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>AKAP8_RAT (Q63014) A-kinase anchor protein 8 (A-kinase anchor protein 95|
          kDa) (AKAP 95)
          Length = 687

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 98 GGYGAWDCGSCSTSLRCGAGWGIWE 24
          GGYGAW  G  +T    G+G   W+
Sbjct: 6  GGYGAWSAGPANTQGTYGSGVASWQ 30



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>AKAP8_MOUSE (Q9DBR0) A-kinase anchor protein 8 (A-kinase anchor protein 95|
          kDa) (AKAP 95)
          Length = 687

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 98 GGYGAWDCGSCSTSLRCGAGWGIWE 24
          GGYGAW  G  +T    G+G   W+
Sbjct: 6  GGYGAWSAGPANTQGTYGSGMTSWQ 30



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>AKAP8_HUMAN (O43823) A-kinase anchor protein 8 (A-kinase anchor protein 95|
          kDa) (AKAP 95)
          Length = 692

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 98 GGYGAWDCGSCSTSLRCGAGWGIWE 24
          GGYGAW  G  +T    G G   W+
Sbjct: 6  GGYGAWSAGPANTQGAYGTGVASWQ 30



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>DBPA_HUMAN (P16989) DNA-binding protein A (Cold shock domain-containing|
           protein A) (Single-strand DNA-binding protein NF-GMB)
          Length = 372

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 263 PRRVAAGEHGE--DVVPGGEAVQGGESRGAHHPVRYR 367
           P R+ AGE GE  D VP G  +QG   R   +  RYR
Sbjct: 256 PNRIQAGEIGEMKDGVPEGAQLQGPVHRNPTYRPRYR 292



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>TXL1_PHONI (P17727) Lethal neurotoxin Tx1 precursor|
          Length = 112

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 86  AWDCGSCSTSLRCGAGWGIW 27
           A +C  C   + CG GWG W
Sbjct: 50  ASNCNCCGDDVYCGCGWGRW 69



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>CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD9) (CHD-9) (Peroxisomal
            proliferator-activated receptor A-interacting complex 320
            kDa protein) (PPAR-alpha-interacting complex protein 320
            kDa)
          Length = 2885

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 107  DEEGGYGAWDCGSCSTSLRCGAGWGIWEERITRG 6
            D  GGYG  +C     +L    GWG W E ++ G
Sbjct: 1484 DRSGGYGRTECFRVEKNLLV-YGWGRWREILSHG 1516



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>SC5A5_RAT (Q63008) Sodium/iodide cotransporter (Na(+)/I(-) cotransporter)|
           (Sodium-iodide symporter) (Na(+)/I(-)-symporter)
          Length = 618

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 116 AGADEEGGYGAWDCGSCSTSLRCGAGWGIWEERITRGG 3
           A A     +GAWD G  +T L    G G+W   + RGG
Sbjct: 4   AEAGARATFGAWDYGVFATMLLVSTGIGLW-VGLARGG 40



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>AKAP8_CANFA (Q5VK71) A-kinase anchor protein 8 (A-kinase anchor protein 95|
          kDa) (AKAP 95)
          Length = 698

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 98 GGYGAWDCGSCSTSLRCGAGWGIWE 24
          GGYGAW  G  +T    G G   W+
Sbjct: 6  GGYGAWSAGPTNTQGAYGTGVASWQ 30



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>ISPDF_RHOCA (Q08113) IspD/ispF bifunctional enzyme [Includes:|
           2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
           (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol
           synthase) (MEP cytidylyltransferase) (MCT);
           2-C-methyl-D-erythritol 2,4-cyclod
          Length = 379

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = -2

Query: 367 PIAHRVVSAARLAALDCLPAGNDVLAVFARSDSPWNEVAGLAA 239
           P+    V+AA LAAL+  P     LAV   +D+ W   AGL A
Sbjct: 102 PLVPASVTAAVLAALETTPGAAPALAV---TDALWRGEAGLVA 141



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>ZN687_MOUSE (Q9D2D7) Zinc finger protein 687|
          Length = 1237

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 275  AAGEHGEDVVPGGEAVQGGESRGAHHPVRYR 367
            +  E  +   P  ++++GG   G H P+RYR
Sbjct: 1086 SCSEEPDSTTPPAKSLRGGPGSGGHGPLRYR 1116



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>KR171_HUMAN (Q9BYP8) Keratin-associated protein 17-1 (Keratin associated|
           protein 16.1)
          Length = 105

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -1

Query: 140 CCWRCVVLAGADEEGGYGAWDCGSCSTSLRCGAGWG 33
           CC  C    G    G  G+   GSC  S  CG+G G
Sbjct: 28  CCGCCGSCCGCGGSGCGGSGCGGSCCGSSCCGSGCG 63



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>DYNA_DROME (P13496) 150 kDa dynein-associated polypeptide (DP-150) (DAP-150)|
           (Protein glued)
          Length = 1265

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +3

Query: 234 PKAARPATSFHGESLRANTARTSFPAGRQSKAASRAALTT 353
           P AA+P  +      R +++RTS  + RQS   SR  LTT
Sbjct: 94  PTAAQPTKA------RLSSSRTSLSSSRQSLLGSRTQLTT 127



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>ZN687_HUMAN (Q8N1G0) Zinc finger protein 687|
          Length = 1237

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 275  AAGEHGEDVVPGGEAVQGGESRGAHHPVRYR 367
            +  E  +   P  ++ +GG   G H P+RYR
Sbjct: 1085 SCSEEPDSTTPPAKSPRGGPGSGGHGPLRYR 1115


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.126    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,308,186
Number of Sequences: 219361
Number of extensions: 508450
Number of successful extensions: 2070
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2070
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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