>OTUD3_HUMAN (Q5T2D3) OTU domain-containing protein 3|
          Length = 398

 Score = 30.8 bits (68), Expect = 0.98
 Identities = 20/49 (40%), Positives = 25/49 (51%)
 Frame = -2

Query: 205 AAGRRLGTGDATAATQRRRDGRQRGVASVREKRAWRRSRDAIGGGDGGE 59
           AA  R G+G   A  +R+RD R    A  +E    RR+R   GGG G E
Sbjct: 6   AAKSRPGSGSRKAEAERKRDERAARRALAKE----RRNRPESGGGGGCE 50

>AKT1_ORYSA (Q8VYX2) Potassium channel AKT1 (OsAKT1)|
          Length = 935

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = -2

Query: 196 RRLGTGDATAATQRRRDGRQR 134
           RR+G GDA  A++ RRDGR R
Sbjct: 19  RRVGAGDAFEASEVRRDGRSR 39

>RIOK2_MOUSE (Q9CQS5) Serine/threonine-protein kinase RIO2 (EC 2.7.11.1) (RIO|
           kinase 2)
          Length = 547

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 211 EAAAGRRLGTGDATAATQRRRDGRQRGVASVREKRAW 101
           +AAA RRL  G+A   T++RR+  Q   +S+     W
Sbjct: 509 KAAARRRLQKGEANVFTKQRRENMQNIKSSLEAASFW 545

>RP54_RHOCA (P09433) RNA polymerase sigma-54 factor|
          Length = 426

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -2

Query: 187 GTGDATAATQRRRDGRQRGVASVREKR 107
           GT DA A  +RRR GR  G     E+R
Sbjct: 256 GTADAKARAERRRRGRGPGAGEALERR 282

>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556|
          Length = 348

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 135 RCLPSRLRCVAAVASPVPSRLPAAASNGSPE 227
           RC  SR  C  A  S +P+  P A+S  SP+
Sbjct: 216 RCSASRAGCPTAAGSLLPAPRPPASSASSPQ 246

>GNA12_HUMAN (Q03113) Guanine nucleotide-binding protein alpha-12 subunit (G|
           alpha-12)
          Length = 380

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = -2

Query: 217 PFEA--AAGRRLGTGDATAATQRRRDGRQRGVASVREKRAWRRSRD--AIGGGDGGE 59
           P EA  A  RR G+G   A  + RR  R       RE+RA RR      +G G+ G+
Sbjct: 13  PAEAGGARERRAGSGARDAEREARRRSRDIDALLARERRAVRRLVKILLLGAGESGK 69


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,712,313
Number of Sequences: 219361
Number of extensions: 506129
Number of successful extensions: 1851
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1848
length of database: 80,573,946
effective HSP length: 53
effective length of database: 68,947,813
effective search space used: 1654747512
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)