ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet76a08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TL17_ARATH (P81760) Thylakoid lumenal 17.4 kDa protein, chloropl... 34 0.083
2TL17_SPIOL (P81778) Thylakoid lumenal 17.4 kDa protein (P17.4) (... 34 0.11
3IRS1_HUMAN (P35568) Insulin receptor substrate 1 (IRS-1) 31 0.70
4IRS1_CERAE (Q28224) Insulin receptor substrate 1 (IRS-1) 31 0.70
5IRS1_MOUSE (P35569) Insulin receptor substrate 1 (IRS-1) 28 4.5
6IRS1_RAT (P35570) Insulin receptor substrate 1 (IRS-1) (pp185) 28 4.5
7RTBDN_SPETR (Q5DRQ5) Retbindin precursor 28 5.9

>TL17_ARATH (P81760) Thylakoid lumenal 17.4 kDa protein, chloroplast precursor|
           (P17.4)
          Length = 236

 Score = 34.3 bits (77), Expect = 0.083
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 248 QRLPPLSTDPKRCEAAF 298
           QRLPPLST+P RCE AF
Sbjct: 80  QRLPPLSTEPDRCEKAF 96



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>TL17_SPIOL (P81778) Thylakoid lumenal 17.4 kDa protein (P17.4) (Fragment)|
          Length = 23

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = +2

Query: 248 QRLPPLSTDPKRCEAAF 298
           QRLPPLS DP RCE AF
Sbjct: 3   QRLPPLSNDPDRCERAF 19



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>IRS1_HUMAN (P35568) Insulin receptor substrate 1 (IRS-1)|
          Length = 1242

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +1

Query: 52  RLAGHRARRLCSTPTAPAEGVPRHVLGRRGG 144
           RL GHR      T + P EG+  H L RRGG
Sbjct: 567 RLPGHRHSAFVPTRSYPEEGLEMHPLERRGG 597



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>IRS1_CERAE (Q28224) Insulin receptor substrate 1 (IRS-1)|
          Length = 1251

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +1

Query: 52  RLAGHRARRLCSTPTAPAEGVPRHVLGRRGG 144
           RL GHR      T + P EG+  H L RRGG
Sbjct: 567 RLPGHRHSAFVPTHSYPEEGLEMHPLERRGG 597



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>IRS1_MOUSE (P35569) Insulin receptor substrate 1 (IRS-1)|
          Length = 1233

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 52  RLAGHRARRLCSTPTAPAEGVPRHVLGRRGG 144
           RL G+R      T + P EG+  H L RRGG
Sbjct: 563 RLPGYRHSAFVPTHSYPEEGLEMHHLERRGG 593



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>IRS1_RAT (P35570) Insulin receptor substrate 1 (IRS-1) (pp185)|
          Length = 1235

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 52  RLAGHRARRLCSTPTAPAEGVPRHVLGRRGG 144
           RL G+R      T + P EG+  H L RRGG
Sbjct: 563 RLPGYRHSAFVPTHSYPEEGLEMHHLERRGG 593



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>RTBDN_SPETR (Q5DRQ5) Retbindin precursor|
          Length = 254

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +2

Query: 17  SPHCIDMVSSCLASPATARGGSALRLQLQPRGCRVTCLADAGGAGSG 157
           S HC+++  S L  P   R       Q   R  R T + DAGG+GSG
Sbjct: 203 SRHCLNISISLLPRPRPGRWARETISQRSRR--RGTGILDAGGSGSG 247


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,158,656
Number of Sequences: 219361
Number of extensions: 485584
Number of successful extensions: 1918
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1918
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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