ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet76a08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197213.1| Oryza sativa (japonica cultivar-group) hypothet... 80 5e-12
2dbj|AK099827.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 5e-12
3gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 gen... 52 0.001
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
6dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 48 0.016
7emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 46 0.064
8gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 44 0.25
9ref|XM_464476.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.00
10ref|XM_473336.1| Oryza sativa (japonica cultivar-group), predic... 42 1.00
11gb|AY020185.1| Oryza sativa microsatellite MRG2510 containing (C... 42 1.00
12gb|AY672599.1| Oryza sativa (japonica cultivar-group) sodium/lit... 42 1.00
13emb|AL606459.5|OSJN00020 Oryza sativa genomic DNA, chromosome 4,... 42 1.00
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.00
15dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.00
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.00
17dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.00
18dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.00
19dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.00
20dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.00
21dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.00
22dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.00
23dbj|AK108550.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.00
24dbj|AK103961.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.00
25dbj|AK069954.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.00
26gb|DQ131227.1| Aeromonas salmonicida lipase gene, partial cds 42 1.00
27ref|XM_450673.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.9
28gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome... 40 3.9
29gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 3.9
30emb|AL161729.27| Human DNA sequence from clone RP11-435O5 on chr... 40 3.9
31emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment ... 40 3.9
32dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 3.9
33gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 3.9
34gb|AF319040.1|AF319040 Leishmania donovani ATP-dependent zinc me... 40 3.9
35dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
36gb|AC009269.6|AC009269 Homo sapiens chromosome 15, clone RP11-13... 40 3.9
37gb|AC092384.5| Homo sapiens chromosome 16 clone RP11-830F9, comp... 40 3.9
38gb|AC072062.3| Homo sapiens BAC clone RP11-548N17 from 2, comple... 40 3.9
39dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
40dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
41gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 3.9
42gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.9 
>ref|NM_197213.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0078O01.30), mRNA
          Length = 711

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 103/124 (83%)
 Strand = Plus / Plus

                                                                       
Query: 166 caaggccgtgggagggttcgcgtgcggcttgctcgcagcctgggccgtcgcgtcagcccc 225
           |||||| ||||| ||| | ||||||||| | ||||| |||||||||||||||||  |  |
Sbjct: 156 caaggcggtgggcgggcttgcgtgcggcgtcctcgcggcctgggccgtcgcgtcctcgtc 215

                                                                       
Query: 226 cagcccggtcttcgccgccggccagaggttgcctccactatcaacagatccaaagaggtg 285
           |||||| ||  | |||||| ||||||||||||||||||| || ||||| ||||| || ||
Sbjct: 216 cagccccgtgattgccgccagccagaggttgcctccactgtccacagagccaaacagatg 275

               
Query: 286 cgag 289
           ||||
Sbjct: 276 cgag 279



 Score = 42.1 bits (21), Expect = 1.00
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                           
Query: 47 tgcctcgcctcgccggccaccgcgcgcggcggc 79
          |||||||||||||||||||| ||| ||||||||
Sbjct: 19 tgcctcgcctcgccggccacggcg-gcggcggc 50
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>dbj|AK099827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013103I15, full
           insert sequence
          Length = 1050

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 103/124 (83%)
 Strand = Plus / Plus

                                                                       
Query: 166 caaggccgtgggagggttcgcgtgcggcttgctcgcagcctgggccgtcgcgtcagcccc 225
           |||||| ||||| ||| | ||||||||| | ||||| |||||||||||||||||  |  |
Sbjct: 274 caaggcggtgggcgggcttgcgtgcggcgtcctcgcggcctgggccgtcgcgtcctcgtc 333

                                                                       
Query: 226 cagcccggtcttcgccgccggccagaggttgcctccactatcaacagatccaaagaggtg 285
           |||||| ||  | |||||| ||||||||||||||||||| || ||||| ||||| || ||
Sbjct: 334 cagccccgtgattgccgccagccagaggttgcctccactgtccacagagccaaacagatg 393

               
Query: 286 cgag 289
           ||||
Sbjct: 394 cgag 397



 Score = 42.1 bits (21), Expect = 1.00
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                            
Query: 47  tgcctcgcctcgccggccaccgcgcgcggcggc 79
           |||||||||||||||||||| ||| ||||||||
Sbjct: 137 tgcctcgcctcgccggccacggcg-gcggcggc 168
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>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete
              sequence
          Length = 146664

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                    
Query: 166    caaggccgtgggagggttcgcgtgcggcttgctcgcagcctgggccgtcgcgtc 219
              |||||| ||||| ||| | ||||||||| | ||||| |||||||||||||||||
Sbjct: 137670 caaggcggtgggcgggcttgcgtgcggcgtcctcgcggcctgggccgtcgcgtc 137617



 Score = 42.1 bits (21), Expect = 1.00
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                               
Query: 47     tgcctcgcctcgccggccaccgcgcgcggcggc 79
              |||||||||||||||||||| ||| ||||||||
Sbjct: 137807 tgcctcgcctcgccggccacggcg-gcggcggc 137776



 Score = 42.1 bits (21), Expect = 1.00
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 249    agaggttgcctccactatcaacagatccaaagaggtgcgag 289
              |||||||||||||||| || ||||| ||||| || ||||||
Sbjct: 136067 agaggttgcctccactgtccacagagccaaacagatgcgag 136027
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                      
Query: 166      caaggccgtgggagggttcgcgtgcggcttgctcgcagcctgggccgtcgcgtc 219
                |||||| ||||| ||| | ||||||||| | ||||| |||||||||||||||||
Sbjct: 18633859 caaggcggtgggcgggcttgcgtgcggcgtcctcgcggcctgggccgtcgcgtc 18633806



 Score = 42.1 bits (21), Expect = 1.00
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                                 
Query: 47       tgcctcgcctcgccggccaccgcgcgcggcggc 79
                |||||||||||||||||||| ||| ||||||||
Sbjct: 18633996 tgcctcgcctcgccggccacggcg-gcggcggc 18633965



 Score = 42.1 bits (21), Expect = 1.00
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 249      agaggttgcctccactatcaacagatccaaagaggtgcgag 289
                |||||||||||||||| || ||||| ||||| || ||||||
Sbjct: 18632256 agaggttgcctccactgtccacagagccaaacagatgcgag 18632216
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                      
Query: 166      caaggccgtgggagggttcgcgtgcggcttgctcgcagcctgggccgtcgcgtc 219
                |||||| ||||| ||| | ||||||||| | ||||| |||||||||||||||||
Sbjct: 18644712 caaggcggtgggcgggcttgcgtgcggcgtcctcgcggcctgggccgtcgcgtc 18644659



 Score = 42.1 bits (21), Expect = 1.00
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                                 
Query: 47       tgcctcgcctcgccggccaccgcgcgcggcggc 79
                |||||||||||||||||||| ||| ||||||||
Sbjct: 18644849 tgcctcgcctcgccggccacggcg-gcggcggc 18644818



 Score = 42.1 bits (21), Expect = 1.00
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 249      agaggttgcctccactatcaacagatccaaagaggtgcgag 289
                |||||||||||||||| || ||||| ||||| || ||||||
Sbjct: 18643109 agaggttgcctccactgtccacagagccaaacagatgcgag 18643069
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 58      gccggccaccgcgcgcggcggctc 81
               ||||||||||||||||||||||||
Sbjct: 3545069 gccggccaccgcgcgcggcggctc 3545046
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>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 52     cgcctcgccggccaccgcgcgcg 74
              |||||||||||||||||||||||
Sbjct: 111829 cgcctcgccggccaccgcgcgcg 111807
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 53      gcctcgccggccaccgcgcgcg 74
               ||||||||||||||||||||||
Sbjct: 1711596 gcctcgccggccaccgcgcgcg 1711575
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>ref|XM_464476.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1272

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 49  cctcgcctcgccggccaccgcgcgcggcg 77
           ||||||||||||| || ||||||||||||
Sbjct: 120 cctcgcctcgccgccccccgcgcgcggcg 92
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>ref|XM_473336.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2241

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 51  tcgcctcgccggccaccgcgcgcggcggc 79
           |||||||| |||||| |||||||||||||
Sbjct: 505 tcgcctcgtcggccatcgcgcgcggcggc 477
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>gb|AY020185.1| Oryza sativa microsatellite MRG2510 containing (CT)X27, closest to
           marker S10019, genomic sequence
          Length = 254

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                            
Query: 47  tgcctcgcctcgccggccaccgcgcgcggcggc 79
           |||||||||||||||||||| ||| ||||||||
Sbjct: 216 tgcctcgcctcgccggccacggcg-gcggcggc 247
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>gb|AY672599.1| Oryza sativa (japonica cultivar-group) sodium/lithium tolerance
           protein gene, complete cds
          Length = 2900

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  ccaccgcgcgcggcggctctg 83
           |||||||||||||||||||||
Sbjct: 810 ccaccgcgcgcggcggctctg 830
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>emb|AL606459.5|OSJN00020 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091D06,
              complete sequence
          Length = 174570

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 51     tcgcctcgccggccaccgcgcgcggcggc 79
              |||||||| |||||| |||||||||||||
Sbjct: 107925 tcgcctcgtcggccatcgcgcgcggcggc 107897
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 51       tcgcctcgccggccaccgcgcgcggcggc 79
                |||||||| |||||| |||||||||||||
Sbjct: 26886865 tcgcctcgtcggccatcgcgcgcggcggc 26886837
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 57       cgccggccaccgcgcgcggcg 77
                |||||||||||||||||||||
Sbjct: 20016571 cgccggccaccgcgcgcggcg 20016591
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 49      cctcgcctcgccggccaccgcgcgcggcg 77
               ||||||||||||| || ||||||||||||
Sbjct: 5452971 cctcgcctcgccgccccccgcgcgcggcg 5452999
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 63       ccaccgcgcgcggcggctctg 83
                |||||||||||||||||||||
Sbjct: 36039626 ccaccgcgcgcggcggctctg 36039606
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>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0408C03
          Length = 141273

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 63    ccaccgcgcgcggcggctctg 83
             |||||||||||||||||||||
Sbjct: 52351 ccaccgcgcgcggcggctctg 52331
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>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1524_D08
          Length = 143046

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 49     cctcgcctcgccggccaccgcgcgcggcg 77
              ||||||||||||| || ||||||||||||
Sbjct: 106552 cctcgcctcgccgccccccgcgcgcggcg 106580
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 56      tcgccggccaccgcgcgcggcggct 80
               ||||||||||| |||||||||||||
Sbjct: 4055222 tcgccggccacggcgcgcggcggct 4055246



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    tggcggccgcgtcaaggccg 173
              ||||||||||||||||||||
Sbjct: 231042 tggcggccgcgtcaaggccg 231061
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>dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:B1068H08
          Length = 152794

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   cgccggccaccgcgcgcggcg 77
            |||||||||||||||||||||
Sbjct: 4845 cgccggccaccgcgcgcggcg 4865
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>dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1018E06
          Length = 178499

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 57     cgccggccaccgcgcgcggcg 77
              |||||||||||||||||||||
Sbjct: 154911 cgccggccaccgcgcgcggcg 154931
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>dbj|AK108550.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-E04, full
           insert sequence
          Length = 1963

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 51  tcgcctcgccggccaccgcgcgcggcggc 79
           |||||||| |||||| |||||||||||||
Sbjct: 115 tcgcctcgtcggccatcgcgcgcggcggc 87
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>dbj|AK103961.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E06, full
           insert sequence
          Length = 2330

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  ccaccgcgcgcggcggctctg 83
           |||||||||||||||||||||
Sbjct: 153 ccaccgcgcgcggcggctctg 173
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>dbj|AK069954.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034F22, full
           insert sequence
          Length = 2340

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  ccaccgcgcgcggcggctctg 83
           |||||||||||||||||||||
Sbjct: 155 ccaccgcgcgcggcggctctg 175
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>gb|DQ131227.1| Aeromonas salmonicida lipase gene, partial cds
          Length = 380

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 49  cctcgcctcgccggccaccgc 69
           |||||||||||||||||||||
Sbjct: 321 cctcgcctcgccggccaccgc 341
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>ref|XM_450673.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1092

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  ctcgcctcgccggccaccgc 69
           ||||||||||||||||||||
Sbjct: 786 ctcgcctcgccggccaccgc 767
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>gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0063F24, complete sequence
          Length = 152738

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    cttgcctcgcctcgccggcc 64
             ||||||||||||||||||||
Sbjct: 56146 cttgcctcgcctcgccggcc 56165
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 133     cgacgcggggggagccgggagtgg 156
               ||||||||||||| ||||||||||
Sbjct: 2074867 cgacgcggggggacccgggagtgg 2074844
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>emb|AL161729.27| Human DNA sequence from clone RP11-435O5 on chromosome 9q22.1-22.33
              Contains the PTCH gene for patched homolog, a novel gene,
              the gene for a novel protein similar to a metallothionein
              protein (MT1) and three CpG islands, complete sequence
          Length = 189643

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     gccaccgcgcgcggcggctc 81
              ||||||||||||||||||||
Sbjct: 135446 gccaccgcgcgcggcggctc 135465
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>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24
          Length = 304450

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   tgccgcgtcacgtgcttggc 132
             ||||||||||||||||||||
Sbjct: 83056 tgccgcgtcacgtgcttggc 83037
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 225     ccagcccggtcttcgccgcc 244
               ||||||||||||||||||||
Sbjct: 3033596 ccagcccggtcttcgccgcc 3033577
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 229     cccggtcttcgccgccggcc 248
               ||||||||||||||||||||
Sbjct: 1564325 cccggtcttcgccgccggcc 1564344
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>gb|AF319040.1|AF319040 Leishmania donovani ATP-dependent zinc metallopeptidase-like
           protein gene, complete cds
          Length = 1797

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  ctcgcctcgccggccaccgc 69
           ||||||||||||||||||||
Sbjct: 524 ctcgcctcgccggccaccgc 505
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 50       ctcgcctcgccggccaccgc 69
                ||||||||||||||||||||
Sbjct: 12143626 ctcgcctcgccggccaccgc 12143607
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>gb|AC009269.6|AC009269 Homo sapiens chromosome 15, clone RP11-138H8, complete sequence
          Length = 172850

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     cgccggccaccgcgcgcggc 76
              ||||||||||||||||||||
Sbjct: 136326 cgccggccaccgcgcgcggc 136345
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>gb|AC092384.5| Homo sapiens chromosome 16 clone RP11-830F9, complete sequence
          Length = 219070

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    cgccggccaccgcgcgcggc 76
             ||||||||||||||||||||
Sbjct: 18527 cgccggccaccgcgcgcggc 18546
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>gb|AC072062.3| Homo sapiens BAC clone RP11-548N17 from 2, complete sequence
          Length = 219399

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     ctacgcctacagctccagcc 105
              ||||||||||||||||||||
Sbjct: 144918 ctacgcctacagctccagcc 144899
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>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1759_F09
          Length = 149501

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    ctcgcctcgccggccaccgc 69
             ||||||||||||||||||||
Sbjct: 55085 ctcgcctcgccggccaccgc 55066
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>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0564H06
          Length = 146823

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    ctcgcctcgccggccaccgc 69
             ||||||||||||||||||||
Sbjct: 78005 ctcgcctcgccggccaccgc 77986
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 59      ccggccaccgcgcgcggcgg 78
               ||||||||||||||||||||
Sbjct: 1376451 ccggccaccgcgcgcggcgg 1376470
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 45       cttgcctcgcctcgccggcc 64
                ||||||||||||||||||||
Sbjct: 19833685 cttgcctcgcctcgccggcc 19833704


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,745,572
Number of Sequences: 3902068
Number of extensions: 1745572
Number of successful extensions: 35573
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34654
Number of HSP's gapped (non-prelim): 917
length of query: 300
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 278
effective length of database: 17,147,199,772
effective search space: 4766921536616
effective search space used: 4766921536616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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