>PMP21_CHLPN (Q9Z6U5) Probable outer membrane protein pmp21 precursor (Polymorphic|
            membrane protein 21)
          Length = 1609

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 14/72 (19%)
 Frame = +2

Query: 56   NLTDQTQSLSFSRTHTTVG-----SQSGPRTIDGRQAFLGAE------AQNQGHRGGGCL 202
            N+TD   ++SFS+  T +G     +  G  TI G Q  +  +      ++NQ   GG  +
Sbjct: 803  NITDNGSAVSFSKNRTRLGGAGVAAPQGSVTICGNQGNIAFKENFVFGSENQRSGGGAII 862

Query: 203  ASAG---KDDAG 229
            A++    +D+AG
Sbjct: 863  ANSSVNIQDNAG 874

>WBS27_HUMAN (Q8N6F8) Williams-Beuren syndrome chromosome region 27 protein|
          Length = 245

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 192 PPRWPWFWASAPRKACRPSM 133
           PP W W+ AS PR A  P++
Sbjct: 212 PPSWWWYPASLPRMASSPAL 231

>VSX1_BOVIN (Q9GMA3) Visual system homeobox 1 (Transcription factor VSX1)|
           (Retinal inner nuclear layer homeobox protein)
           (Homeodomain protein RINX)
          Length = 365

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -1

Query: 361 PEHPLPLRCRFRGAPPPRCCR 299
           PE P PL  RF G PPP   R
Sbjct: 111 PEGPEPLAPRFPGRPPPSAAR 131

>PQQE_RHOPA (Q6N8F3) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone|
           biosynthesis protein E)
          Length = 377

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 171 WASAPRKACRPSMVLGPDCEPTVVCVREKLK 79
           WA   R A  P++    DC  TV   RE+LK
Sbjct: 196 WALKNRAALMPTLAQIEDCTATVEAARERLK 226

>ATG13_KLULA (Q6CWK2) Autophagy-related protein 13|
          Length = 684

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 140 HRWFLVPTVSRPWCVSERSLKTGFDLSNWQVEMERQ 33
           H  +L      PW V +   KT   L  W VE+++Q
Sbjct: 89  HMVYLHDADGNPWMVCKGGKKTEIVLERWLVELDKQ 124

>GUXB_CELFI (P50899) Exoglucanase B precursor (EC 3.2.1.91)|
           (Exocellobiohydrolase B) (1,4-beta-cellobiohydrolase B)
           (CBP120)
          Length = 1090

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 107 PWCVSERSLKTGFDLSNWQVEMERQWQGSR*LWNA 3
           PW V+  S     D ++W+V  E +W G    WNA
Sbjct: 504 PWVVANIST----DGASWKVPSELKWTGKPDTWNA 534


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,345,082
Number of Sequences: 219361
Number of extensions: 574938
Number of successful extensions: 1962
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1961
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)