>ref|XM_546660.2| PREDICTED: Canis familiaris similar to retinoic acid induced 1
            (LOC489541), mRNA
          Length = 5854

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 99   tcgtccagccaccggtgagccttgg 123
            |||||||||||||||| ||||||||
Sbjct: 2495 tcgtccagccaccggtcagccttgg 2471

>gb|AY609578.1| Sus scrofa clone Clu_19594.scr.msk.p1.Contig2, mRNA sequence
          Length = 1109

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 50  gctgctcctcctcttccgcct 70
           |||||||||||||||||||||
Sbjct: 149 gctgctcctcctcttccgcct 129

>ref|XM_426168.1| PREDICTED: Gallus gallus similar to hypothetical protein
           (LOC428611), mRNA
          Length = 978

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  cccgctgctcctcctcttcc 66
           ||||||||||||||||||||
Sbjct: 381 cccgctgctcctcctcttcc 400

>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 91      gctgccactcgtccagccaccggtgagc 118
               |||||||||  |||||||||||||||||
Sbjct: 3046073 gctgccacttttccagccaccggtgagc 3046046


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,190,419
Number of Sequences: 3902068
Number of extensions: 1190419
Number of successful extensions: 23655
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 23646
Number of HSP's gapped (non-prelim): 9
length of query: 234
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 212
effective length of database: 17,147,199,772
effective search space: 3635206351664
effective search space used: 3635206351664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)