ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet75g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ810709.1| Poa pratensis mRNA for Ankyrin protein kinase-li... 325 4e-86
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 276 3e-71
3dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic D... 276 3e-71
4dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic D... 276 3e-71
5dbj|AK102287.1| Oryza sativa (japonica cultivar-group) cDNA clon... 276 3e-71
6gb|AC149291.1| Solanum demissum chromosome 5 clone PGEC568H16 ma... 66 6e-08
7gb|AC151802.1| Solanum tuberosum chromosome 5 clone PGEC46 map M... 58 1e-05
8gb|AC149267.1| Solanum demissum chromosome 5 clone PGEC747E24 ma... 58 1e-05
9gb|AC149287.1| Solanum demissum chromosome 5 clone PGEC568D21 ma... 58 1e-05
10gb|AY730334.1| Solanum tuberosum strain P6/210 clone BAC BA122p1... 58 1e-05
11gb|AC144791.1| Solanum demissum chromosome 5 BAC PGEC668E02 geno... 58 1e-05
12gb|BT014522.1| Lycopersicon esculentum clone 133918F, mRNA sequence 50 0.003
13gb|AC105951.9| Mus musculus chromosome 5, clone RP23-475D21, com... 42 0.81
14gb|AC161507.2| Mus musculus chromosome 5, clone RP23-76L18, comp... 42 0.81
15gb|AC159298.3| Mus musculus BAC clone RP23-265N1 from chromosome... 40 3.2
16gb|AC120366.9| Mus musculus chromosome 1, clone RP24-294P1, comp... 40 3.2
17gb|AE006313.1| Lactococcus lactis subsp. lactis IL1403 section 7... 40 3.2
18gb|AC131977.8| Mus musculus chromosome 10, clone RP24-151B6, com... 40 3.2
19gb|AC154347.2| Mus musculus BAC clone RP24-512K3 from chromosome... 40 3.2
20ref|XM_976881.1| PREDICTED: Mus musculus gene model 980, (NCBI) ... 40 3.2
21ref|XM_355258.5| PREDICTED: Mus musculus gene model 980, (NCBI) ... 40 3.2
22gb|AC133602.3| Mus musculus BAC clone RP24-255I9 from chromosome... 40 3.2
23gb|AC102593.8| Mus musculus chromosome 10, clone RP23-341M12, co... 40 3.2
24gb|AC113322.7| Mus musculus chromosome 3, clone RP23-446O11, com... 40 3.2
25emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 3.2
26gb|AC151965.2| Mus musculus BAC clone RP24-173B17 from chromosom... 40 3.2
27gb|AC151734.3| Mus musculus BAC clone RP23-22O15 from chromosome... 40 3.2
28gb|AC149218.7| Mus musculus BAC clone RP24-96C7 from chromosome ... 40 3.2
29emb|BX323810.8| Zebrafish DNA sequence from clone CH211-153K16 i... 40 3.2
30dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 3.2
31gb|AC151720.2| Mus musculus BAC clone RP23-44P12 from 7, complet... 40 3.2
32gb|AC140797.10| Mus musculus chromosome 3, clone RP23-137D8, com... 40 3.2
33emb|AL670882.5| Mouse DNA sequence from clone RP23-286G19 on chr... 40 3.2
34emb|AL808118.8| Mouse DNA sequence from clone RP23-287O8 on chro... 40 3.2 
>emb|AJ810709.1| Poa pratensis mRNA for Ankyrin protein kinase-like (apk gene)
          Length = 2703

 Score =  325 bits (164), Expect = 4e-86
 Identities = 224/244 (91%)
 Strand = Plus / Plus

                                                                       
Query: 3   aaggcagctccggcgatcttgtttcaccagtgaagaagtttaagccatgcccggaccgct 62
           |||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 527 aaggaagctccggtgatcttgtttcgccggtgaagaagtttaagccatgcccggaccgct 586

                                                                       
Query: 63  tcacggactatacaccttgccaagatcaaaacagagctatgaaatttcctcgggagaaca 122
           |||| || ||||| ||||||||||||||||||||||| ||||| |||||||| |||||||
Sbjct: 587 tcacagattataccccttgccaagatcaaaacagagcgatgaagtttcctcgcgagaaca 646

                                                                       
Query: 123 tgaattacagagagcggcattgcccatctcagaaagaaaagctgcactgcctggtaccac 182
           |||| |||||||||||||| ||||||   ||||||||||||||||||||||||||||| |
Sbjct: 647 tgaactacagagagcggcactgcccactgcagaaagaaaagctgcactgcctggtaccgc 706

                                                                       
Query: 183 cgcctaagggatatgttgctccgttcccatggcccaaaagtcgggactatgttccttttg 242
           |||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||
Sbjct: 707 cgcccaagggatatgttgctcctttcccgtggccgaaaagtcgggactatgttccttttg 766

               
Query: 243 cgaa 246
           ||||
Sbjct: 767 cgaa 770
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  276 bits (139), Expect = 3e-71
 Identities = 211/235 (89%)
 Strand = Plus / Plus

                                                                            
Query: 15       gcgatcttgtttcaccagtgaagaagtttaagccatgcccggaccgcttcacggactata 74
                ||||||| ||||| || | ||||||||||||||| |||||||| |||| |||||| ||||
Sbjct: 14813692 gcgatctcgtttcgccggcgaagaagtttaagccgtgcccggatcgctacacggattata 14813751

                                                                            
Query: 75       caccttgccaagatcaaaacagagctatgaaatttcctcgggagaacatgaattacagag 134
                | |||||||||||||| |||||||| ||||| || ||||||||||| ||||||||||| |
Sbjct: 14813752 ccccttgccaagatcagaacagagcgatgaagttccctcgggagaatatgaattacaggg 14813811

                                                                            
Query: 135      agcggcattgcccatctcagaaagaaaagctgcactgcctggtaccaccgcctaagggat 194
                |||||||||||||| | |||||||| ||||||||||||||| |||| || ||||||||||
Sbjct: 14813812 agcggcattgcccaccgcagaaagagaagctgcactgcctgataccgccacctaagggat 14813871

                                                                       
Query: 195      atgttgctccgttcccatggcccaaaagtcgggactatgttccttttgcgaattg 249
                |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 14813872 atgttgctccattcccatggccgaaaagtcgggactatgttcctttcgcgaattg 14813926
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>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0707C02
          Length = 163609

 Score =  276 bits (139), Expect = 3e-71
 Identities = 211/235 (89%)
 Strand = Plus / Plus

                                                                         
Query: 15    gcgatcttgtttcaccagtgaagaagtttaagccatgcccggaccgcttcacggactata 74
             ||||||| ||||| || | ||||||||||||||| |||||||| |||| |||||| ||||
Sbjct: 99081 gcgatctcgtttcgccggcgaagaagtttaagccgtgcccggatcgctacacggattata 99140

                                                                         
Query: 75    caccttgccaagatcaaaacagagctatgaaatttcctcgggagaacatgaattacagag 134
             | |||||||||||||| |||||||| ||||| || ||||||||||| ||||||||||| |
Sbjct: 99141 ccccttgccaagatcagaacagagcgatgaagttccctcgggagaatatgaattacaggg 99200

                                                                         
Query: 135   agcggcattgcccatctcagaaagaaaagctgcactgcctggtaccaccgcctaagggat 194
             |||||||||||||| | |||||||| ||||||||||||||| |||| || ||||||||||
Sbjct: 99201 agcggcattgcccaccgcagaaagagaagctgcactgcctgataccgccacctaagggat 99260

                                                                    
Query: 195   atgttgctccgttcccatggcccaaaagtcgggactatgttccttttgcgaattg 249
             |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 99261 atgttgctccattcccatggccgaaaagtcgggactatgttcctttcgcgaattg 99315
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>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0014G10
          Length = 164147

 Score =  276 bits (139), Expect = 3e-71
 Identities = 211/235 (89%)
 Strand = Plus / Plus

                                                                         
Query: 15    gcgatcttgtttcaccagtgaagaagtttaagccatgcccggaccgcttcacggactata 74
             ||||||| ||||| || | ||||||||||||||| |||||||| |||| |||||| ||||
Sbjct: 22031 gcgatctcgtttcgccggcgaagaagtttaagccgtgcccggatcgctacacggattata 22090

                                                                         
Query: 75    caccttgccaagatcaaaacagagctatgaaatttcctcgggagaacatgaattacagag 134
             | |||||||||||||| |||||||| ||||| || ||||||||||| ||||||||||| |
Sbjct: 22091 ccccttgccaagatcagaacagagcgatgaagttccctcgggagaatatgaattacaggg 22150

                                                                         
Query: 135   agcggcattgcccatctcagaaagaaaagctgcactgcctggtaccaccgcctaagggat 194
             |||||||||||||| | |||||||| ||||||||||||||| |||| || ||||||||||
Sbjct: 22151 agcggcattgcccaccgcagaaagagaagctgcactgcctgataccgccacctaagggat 22210

                                                                    
Query: 195   atgttgctccgttcccatggcccaaaagtcgggactatgttccttttgcgaattg 249
             |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 22211 atgttgctccattcccatggccgaaaagtcgggactatgttcctttcgcgaattg 22265
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>dbj|AK102287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089J21, full
           insert sequence
          Length = 2371

 Score =  276 bits (139), Expect = 3e-71
 Identities = 211/235 (89%)
 Strand = Plus / Plus

                                                                       
Query: 15  gcgatcttgtttcaccagtgaagaagtttaagccatgcccggaccgcttcacggactata 74
           ||||||| ||||| || | ||||||||||||||| |||||||| |||| |||||| ||||
Sbjct: 472 gcgatctcgtttcgccggcgaagaagtttaagccgtgcccggatcgctacacggattata 531

                                                                       
Query: 75  caccttgccaagatcaaaacagagctatgaaatttcctcgggagaacatgaattacagag 134
           | |||||||||||||| |||||||| ||||| || ||||||||||| ||||||||||| |
Sbjct: 532 ccccttgccaagatcagaacagagcgatgaagttccctcgggagaatatgaattacaggg 591

                                                                       
Query: 135 agcggcattgcccatctcagaaagaaaagctgcactgcctggtaccaccgcctaagggat 194
           |||||||||||||| | |||||||| ||||||||||||||| |||| || ||||||||||
Sbjct: 592 agcggcattgcccaccgcagaaagagaagctgcactgcctgataccgccacctaagggat 651

                                                                  
Query: 195 atgttgctccgttcccatggcccaaaagtcgggactatgttccttttgcgaattg 249
           |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 652 atgttgctccattcccatggccgaaaagtcgggactatgttcctttcgcgaattg 706
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>gb|AC149291.1| Solanum demissum chromosome 5 clone PGEC568H16 map MAP_LOC, complete
             sequence
          Length = 146091

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                  
Query: 185   cctaagggatatgttgctccgttcccatggcccaaaagtcgggactatgttcc 237
             ||||||||||||||| | ||||| |||||||| ||||||||||| ||||||||
Sbjct: 98209 cctaagggatatgttaccccgtttccatggccaaaaagtcgggattatgttcc 98261
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>gb|AC151802.1| Solanum tuberosum chromosome 5 clone PGEC46 map MAP_LOC, complete
            sequence
          Length = 43509

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 185  cctaagggatatgttgctccgttcccatggcccaaaagtcgggactatgttcc 237
            ||||||||||||||| | ||||| || ||||| ||||||||||| ||||||||
Sbjct: 4338 cctaagggatatgttaccccgtttccgtggccaaaaagtcgggattatgttcc 4286
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>gb|AC149267.1| Solanum demissum chromosome 5 clone PGEC747E24 map MAP_LOC, complete
             sequence
          Length = 92340

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 185   cctaagggatatgttgctccgttcccatggcccaaaagtcgggactatgttcc 237
             ||||||||||||||| | ||||| || ||||| ||||||||||| ||||||||
Sbjct: 91785 cctaagggatatgttaccccgtttccgtggccaaaaagtcgggattatgttcc 91733
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>gb|AC149287.1| Solanum demissum chromosome 5 clone PGEC568D21 map MAP_LOC, complete
            sequence
          Length = 119525

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 185  cctaagggatatgttgctccgttcccatggcccaaaagtcgggactatgttcc 237
            ||||||||||||||| | ||||| || ||||| ||||||||||| ||||||||
Sbjct: 4667 cctaagggatatgttaccccgtttccgtggccaaaaagtcgggattatgttcc 4615
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>gb|AY730334.1| Solanum tuberosum strain P6/210 clone BAC BA122p13, complete sequence
          Length = 91226

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 185   cctaagggatatgttgctccgttcccatggcccaaaagtcgggactatgttcc 237
             ||||||||||||||| | ||||| || ||||| ||||||||||| ||||||||
Sbjct: 38863 cctaagggatatgttaccccgtttccgtggccaaaaagtcgggattatgttcc 38811
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>gb|AC144791.1| Solanum demissum chromosome 5 BAC PGEC668E02 genomic sequence, complete
             sequence
          Length = 142575

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 185   cctaagggatatgttgctccgttcccatggcccaaaagtcgggactatgttcc 237
             ||||||||||||||| | ||||| || ||||| ||||||||||| ||||||||
Sbjct: 41178 cctaagggatatgttaccccgtttccgtggccaaaaagtcgggattatgttcc 41230
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>gb|BT014522.1| Lycopersicon esculentum clone 133918F, mRNA sequence
          Length = 2199

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 185 cctaagggatatgttgctccgttcccatggcccaaaagtcgggactatgttcc 237
           ||||||||||||||| | || || || ||||| ||||||||||| ||||||||
Sbjct: 437 cctaagggatatgttaccccatttccgtggccaaaaagtcgggattatgttcc 489
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>gb|AC105951.9| Mus musculus chromosome 5, clone RP23-475D21, complete sequence
          Length = 178610

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 90     aaaacagagctatgaaatttc 110
              |||||||||||||||||||||
Sbjct: 174589 aaaacagagctatgaaatttc 174569
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>gb|AC161507.2| Mus musculus chromosome 5, clone RP23-76L18, complete sequence
          Length = 262831

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 90     aaaacagagctatgaaatttc 110
              |||||||||||||||||||||
Sbjct: 205699 aaaacagagctatgaaatttc 205719
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>gb|AC159298.3| Mus musculus BAC clone RP23-265N1 from chromosome 5, complete
            sequence
          Length = 175995

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 94   cagagctatgaaatttcctc 113
            ||||||||||||||||||||
Sbjct: 1219 cagagctatgaaatttcctc 1200
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>gb|AC120366.9| Mus musculus chromosome 1, clone RP24-294P1, complete sequence
          Length = 156784

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 140   cattgcccatctcagaaagaaaag 163
             ||||| ||||||||||||||||||
Sbjct: 57069 cattggccatctcagaaagaaaag 57046
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>gb|AE006313.1| Lactococcus lactis subsp. lactis IL1403 section 75 of 218 of the
            complete genome
          Length = 10634

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 149  tctcagaaagaaaagctgca 168
            ||||||||||||||||||||
Sbjct: 2957 tctcagaaagaaaagctgca 2938
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>gb|AC131977.8| Mus musculus chromosome 10, clone RP24-151B6, complete sequence
          Length = 146010

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    cagagctatgaaatttcctc 113
             ||||||||||||||||||||
Sbjct: 82167 cagagctatgaaatttcctc 82186
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>gb|AC154347.2| Mus musculus BAC clone RP24-512K3 from chromosome 12, complete sequence
          Length = 163689

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    cagagctatgaaatttcctc 113
             ||||||||||||||||||||
Sbjct: 94813 cagagctatgaaatttcctc 94832
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>ref|XM_976881.1| PREDICTED: Mus musculus gene model 980, (NCBI) (LOC381311), mRNA
          Length = 11496

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 140  cattgcccatctcagaaagaaaag 163
            ||||| ||||||||||||||||||
Sbjct: 4750 cattggccatctcagaaagaaaag 4773
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>ref|XM_355258.5| PREDICTED: Mus musculus gene model 980, (NCBI) (LOC381311), mRNA
          Length = 8391

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 140  cattgcccatctcagaaagaaaag 163
            ||||| ||||||||||||||||||
Sbjct: 5542 cattggccatctcagaaagaaaag 5565
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>gb|AC133602.3| Mus musculus BAC clone RP24-255I9 from chromosome 15, complete sequence
          Length = 155411

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     cagagctatgaaatttcctc 113
              ||||||||||||||||||||
Sbjct: 106137 cagagctatgaaatttcctc 106118
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>gb|AC102593.8| Mus musculus chromosome 10, clone RP23-341M12, complete sequence
          Length = 212025

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     cagagctatgaaatttcctc 113
              ||||||||||||||||||||
Sbjct: 169412 cagagctatgaaatttcctc 169393
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>gb|AC113322.7| Mus musculus chromosome 3, clone RP23-446O11, complete sequence
          Length = 209697

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 94  cagagctatgaaatttcctc 113
           ||||||||||||||||||||
Sbjct: 688 cagagctatgaaatttcctc 669
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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 83      caagatcaaaacagagctat 102
               ||||||||||||||||||||
Sbjct: 1940064 caagatcaaaacagagctat 1940045
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>gb|AC151965.2| Mus musculus BAC clone RP24-173B17 from chromosome 5, complete sequence
          Length = 221687

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    cagagctatgaaatttcctc 113
             ||||||||||||||||||||
Sbjct: 91571 cagagctatgaaatttcctc 91590
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>gb|AC151734.3| Mus musculus BAC clone RP23-22O15 from chromosome 15, complete sequence
          Length = 229862

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    cagagctatgaaatttcctc 113
             ||||||||||||||||||||
Sbjct: 65182 cagagctatgaaatttcctc 65163
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>gb|AC149218.7| Mus musculus BAC clone RP24-96C7 from chromosome 7, complete sequence
          Length = 154419

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     cagagctatgaaatttcctc 113
              ||||||||||||||||||||
Sbjct: 154017 cagagctatgaaatttcctc 153998
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>emb|BX323810.8| Zebrafish DNA sequence from clone CH211-153K16 in linkage group 14,
             complete sequence
          Length = 166625

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   aagggatatgttgctccgtt 207
             ||||||||||||||||||||
Sbjct: 75179 aagggatatgttgctccgtt 75160
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 83      caagatcaaaacagagctat 102
               ||||||||||||||||||||
Sbjct: 1923302 caagatcaaaacagagctat 1923283
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>gb|AC151720.2| Mus musculus BAC clone RP23-44P12 from 7, complete sequence
          Length = 233007

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    cagagctatgaaatttcctc 113
             ||||||||||||||||||||
Sbjct: 46187 cagagctatgaaatttcctc 46168
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>gb|AC140797.10| Mus musculus chromosome 3, clone RP23-137D8, complete sequence
          Length = 153333

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    cagagctatgaaatttcctc 113
             ||||||||||||||||||||
Sbjct: 46698 cagagctatgaaatttcctc 46717
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>emb|AL670882.5| Mouse DNA sequence from clone RP23-286G19 on chromosome X, complete
            sequence
          Length = 194517

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 94   cagagctatgaaatttcctc 113
            ||||||||||||||||||||
Sbjct: 9335 cagagctatgaaatttcctc 9316
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>emb|AL808118.8| Mouse DNA sequence from clone RP23-287O8 on chromosome 4, complete
             sequence
          Length = 164068

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    cagagctatgaaatttcctc 113
             ||||||||||||||||||||
Sbjct: 86161 cagagctatgaaatttcctc 86180


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,108,879
Number of Sequences: 3902068
Number of extensions: 2108879
Number of successful extensions: 35892
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35812
Number of HSP's gapped (non-prelim): 80
length of query: 249
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 227
effective length of database: 17,147,199,772
effective search space: 3892414348244
effective search space used: 3892414348244
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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