>Y2306_MYCTU (Q50659) Hypothetical protein Rv2306c/MT2363 precursor|
          Length = 208

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +2

Query: 188 VVPRCVQARRASRVRGETSSKGPAQTPEEAAVIG 289
           V+P C  A +A RV  + SS GP  TP  AA IG
Sbjct: 133 VIPACAPAEKAGRVT-KVSSSGPNSTPLPAARIG 165

>TROAP_HUMAN (Q12815) Trophinin-associated protein (Tastin) (Trophinin-assisting|
           protein)
          Length = 778

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -1

Query: 397 PPAGVSALSGLLKSPTRLRDTDGTLTSLLFCFWSSEADDGCFF 269
           PPAG + LS L      LR+   +  + + CF  +  DD C F
Sbjct: 694 PPAGQAGLSNLAPRTLALRERLKSCLTAIHCFHEARLDDECAF 736

>AZI1_HUMAN (Q9UPN4) 5-azacytidine-induced protein 1 (Pre-acrosome localization|
           protein 1) (Centrosomal protein of 131 kDa) (Cep131
           protein)
          Length = 1083

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 146 RRQAHPQLPPAIDRVVPRCVQARRASRV-RGETSSKGPAQTPEEAAVIGFR*PEAE 310
           RR+A  +      R   + +Q +RA R  +  T+ +GP + P E  V G R P  E
Sbjct: 324 RRKAREEKARQARRAAIQELQQKRALRAQKASTAERGPPENPRETRVPGMRQPAQE 379

>RDRP_TCV (P17460) Probable RNA-directed RNA polymerase (EC 2.7.7.48)|
           (Protein p88) [Contains: Protein p28]
          Length = 775

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 9/45 (20%)
 Frame = -2

Query: 249 LELVSPRTRDARRACTHRGTTRS---------MAGGSWGWAWRRL 142
           L+L S R  D R A    G  R          M G SW  AWRRL
Sbjct: 193 LDLHSVRAHDHRNALAEAGKVRKWWVNLAMHPMTGRSWSRAWRRL 237

>CD79B_HUMAN (P40259) B-cell antigen receptor complex-associated protein|
           beta-chain precursor (B-cell-specific glycoprotein B29)
           (Immunoglobulin-associated B29 protein) (IG-beta) (CD79b
           antigen)
          Length = 229

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 16/61 (26%), Positives = 25/61 (40%)
 Frame = -2

Query: 327 P*PAFSSASGHRKPMTAASSGVWAGPLELVSPRTRDARRACTHRGTTRSMAGGSWGWAWR 148
           P PA  S   +R P  +A S +W  P  +   R    +  C       + A G+  W W+
Sbjct: 25  PVPAARSEDRYRNPKGSACSRIWQSPRFIARKRGFTVKMHC-----YMNSASGNVSWLWK 79

Query: 147 R 145
           +
Sbjct: 80  Q 80

>SAT_RIFPS (Q54506) Sulfate adenylyltransferase (EC 2.7.7.4) (Sulfate|
           adenylate transferase) (SAT) (ATP-sulfurylase)
          Length = 437

 Score = 26.2 bits (56), Expect(2) = 6.8
 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = -2

Query: 348 AYVTPTVP*-PAFSSASG-HRKPMTAASSGVWAGPLELVSPRTRDARRACTHRGTTRS 181
           A+VT TVP  P  SS +   R P  + SS    G L+       DARRA +H+G  R+
Sbjct: 298 AWVTTTVPSTPRPSSMTKCQRAPWRSRSSCRPHGLLQEAEQDCDDARRAGSHQGRLRT 355



 Score = 21.2 bits (43), Expect(2) = 6.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 178 GRR*LGMGLAPP 143
           GR  LG G+APP
Sbjct: 361 GREMLGQGIAPP 372

>HDAC7_HUMAN (Q8WUI4) Histone deacetylase 7a (HD7a)|
          Length = 952

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +2

Query: 116 VTNGGHDPKRRRQAHPQLPPAIDRVVPRCVQARRASRVRGETSSKGPAQT 265
           +  GGH P  R Q+ P  P ++    P       AS+ R  +SS+ PA+T
Sbjct: 473 LAQGGHRPLSRAQSSPAAPASLSAPEP-------ASQARVLSSSETPART 515

>PRP16_HUMAN (Q92620) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16|
           (EC 3.6.1.-) (ATP-dependent RNA helicase DHX38) (DEAH
           box protein 38)
          Length = 1227

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 184 PGRATMRASTAGITRSRRNKFQGPSPNPGRSSRHR 288
           P R+T     +G   SRR++++ PSP P      R
Sbjct: 210 PSRSTWEEEDSGYGSSRRSQWESPSPTPSYRDSER 244

>NADB_RHILO (Q98AV8) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate|
           synthetase B)
          Length = 513

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 36/125 (28%), Positives = 48/125 (38%), Gaps = 17/125 (13%)
 Frame = -2

Query: 354 RHAYVTPTV-P*PAFSSASGHRKPMTAAS------SGVWA----------GPLELVSPRT 226
           +HA + P V P P   +A  H   +   +      SG+WA          G   L S   
Sbjct: 319 KHAGIDPAVEPIPVRPAAHYHMGGVAVDAEGRTSVSGLWACGEVACTGLHGANRLASNSL 378

Query: 225 RDARRACTHRGTTRSMAGGSWGWAWRRLFGSWPPLVTS*SS*LIHSTPAAAEQNC*SMPD 46
            +A    T      S+AG S GW W RL  + P          I S      +N  S+ D
Sbjct: 379 TEA--VATAAWVAESVAGTSAGWQWPRLPATVPIRPDPSPIRTIVSNALGIVRNGKSLCD 436

Query: 45  SVATL 31
           +VATL
Sbjct: 437 TVATL 441

>PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
           3.6.1.-)
          Length = 1173

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +3

Query: 294 DDQKQKRRLVKVPSVSRRRVGDFSKPDKADTPAGGSENVVE 416
           DD+K+  RL K+ +  +++  +  +  K    +GG  N++E
Sbjct: 168 DDEKRAERLAKLEAWKQKQAAEKERKQKEAEASGGPRNILE 208

>WHRN_MOUSE (Q80VW5) Whirlin|
          Length = 906

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -2

Query: 297 HRKPMTAASSGVWAGPLELVSPRTRDARRACTHRGTTRSMAGGS 166
           +R+P  AA  G   G + LVS      RRA  H G   S+ GGS
Sbjct: 123 YRQPAWAAPDGAGPGEVRLVS-----LRRAKAHEGLGFSIRGGS 161

>WHRN_RAT (Q810W9) Whirlin (CASK-interacting protein CIP98)|
          Length = 920

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -2

Query: 297 HRKPMTAASSGVWAGPLELVSPRTRDARRACTHRGTTRSMAGGS 166
           +R+P  AA  G   G + LVS      RRA  H G   S+ GGS
Sbjct: 123 YRQPAWAAPDGAGPGEVRLVS-----LRRAKAHEGLGFSIRGGS 161


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,189,081
Number of Sequences: 219361
Number of extensions: 1518392
Number of successful extensions: 4657
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4652
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)