>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 54.7 bits (130), Expect = 5e-08
 Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
 Frame = +2

Query: 32  FPPPYARCSNGRLVIDFLAEALGVPLLPPSANK-GTNFSQGANFAVMGATALELKYFRDN 208
           F  P  R  +GRLVIDF+AE+LG+P L    +  G+NFS GANFA  G+    L      
Sbjct: 60  FGSPAGRYCDGRLVIDFIAESLGLPYLSAFLDSVGSNFSHGANFATAGSPIRALNSTLRQ 119

Query: 209 NVWSIPPFNTSMK-CQLEWFQEVKETVCSSPQECK------EFFGKALFVFGEFGGNDYS 367
           + +S  PF+  ++  Q   F    +TV S     K      + F KAL+ F + G ND +
Sbjct: 120 SGFS--PFSLDVQFVQFYNFHNRSQTVRSRGGVYKTMLPESDSFSKALYTF-DIGQNDLT 176

Query: 368 FAWKAEWSLD 397
             + A  +++
Sbjct: 177 AGYFANKTVE 186

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 10/67 (14%)
 Frame = +2

Query: 8   GKLPNMPKFPPPYA---------RCSNGRLVIDFLAEALGVPLLPP-SANKGTNFSQGAN 157
           GK        PPY          R S+GRL+IDF+AE+  +P L P  ++ G+NF  GA+
Sbjct: 47  GKAAAFYPLNPPYGETFFHRSTGRYSDGRLIIDFIAESFNLPYLSPYLSSLGSNFKHGAD 106

Query: 158 FAVMGAT 178
           FA  G+T
Sbjct: 107 FATAGST 113

>GP179_HUMAN (Q6PRD1) Probable G-protein coupled receptor 179 precursor (Probable|
            G-protein coupled receptor 158-like 1)
          Length = 2367

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 22/98 (22%), Positives = 39/98 (39%)
 Frame = +1

Query: 1    QLRQAAQHAQVPAALRPLLQRPSRHRLPXXXXXXXXXXXXXEQGHQLQSGRQLRGDGRHR 180
            Q ++  +  +  AA+  L++RPS  RL               +   +        D  H 
Sbjct: 865  QAKEREERKKAKAAMASLVRRPSARRLERPRGAPLSAPPSPAKSSSV--------DSSHT 916

Query: 181  SGAQVLQG*QRVEHPAVQHLHEVPARVVPGGQGDCLLL 294
            SG    +  +R+ HP ++H    P   + GG G+  +L
Sbjct: 917  SGRLHEEARRRLPHPPIRHQVSTPILALSGGLGEPRML 954

>SYV_SHEON (Q8EBS5) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 958

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
 Frame = +1

Query: 139 LQSGRQLRGDGRHRSGAQVLQG*QRVEHPAVQHLHE-VPARVVP--GGQGDCLLL 294
           LQ+G + +  G   +   VL+  QR+ HP + ++ E +  RV P  G QGD ++L
Sbjct: 729 LQNGTEAQMRGTRHTLVNVLEAMQRLMHPMMPYITETIWQRVKPLTGVQGDTIML 783

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
 Frame = +2

Query: 50  RCSNGRLVIDFLAEALGVPLLPP----------SANKGTNFSQGANFAVMGATALELKYF 199
           R SNGR+  D++++ LGV  + P          +  + ++   G +FA  GA  L     
Sbjct: 165 RFSNGRVASDYISKYLGVKEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLP---- 220

Query: 200 RDNNVWSIPPFNTSMKCQLEWFQEVKE 280
           + +  W +    T+M  QL +FQ+ K+
Sbjct: 221 QTSESWKV----TTMLDQLTYFQDYKK 243

>PARD3_RAT (Q9Z340) Partitioning-defective 3 homolog (PARD-3) (PAR-3)|
           (Atypical PKC isotype-specific-interacting protein)
           (ASIP) (Atypical PKC-specific-binding protein) (ASBP)
          Length = 1337

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = -3

Query: 208 VIPEVLELQSGGAHHREVG-ALTEVGALVXXXXXXXXXXRLGQEVDDETAVGAAGVGRRE 32
           V+P  L  QS  + H +VG  +TE G              L  +VD   A    G GR+ 
Sbjct: 768 VLPPHLSDQSSSSSHDDVGFIMTEAGTWAKATISDSADCSLSPDVDPVLAFQREGFGRQS 827

Query: 31  L 29
           +
Sbjct: 828 M 828

>CO6_HUMAN (P13671) Complement component C6 precursor|
          Length = 934

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 12/70 (17%)
 Frame = +2

Query: 191 KYFRDNNVWSIPPFNTSMKCQLEWFQEVK------------ETVCSSPQECKEFFGKALF 334
           +Y    N W+ PP + S+ C+ +   ++K            E +C SP+E      + L 
Sbjct: 743 RYTCQGNSWT-PPISNSLTCEKDTLTKLKGHCQLGQKQSGSECICMSPEEDCSHHSEDLC 801

Query: 335 VFGEFGGNDY 364
           VF +   NDY
Sbjct: 802 VF-DTDSNDY 810

>PARD3_MOUSE (Q99NH2) Partitioning-defective 3 homolog (PARD-3) (PAR-3)|
           (Atypical PKC isotype-specific-interacting protein)
           (ASIP) (Ephrin-interacting protein) (PHIP)
          Length = 1333

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = -3

Query: 208 VIPEVLELQSGGAHHREVG-ALTEVGALVXXXXXXXXXXRLGQEVDDETAVGAAGVGRRE 32
           V+P  L  QS  + H +VG  +TE G              L  +VD   A    G GR+ 
Sbjct: 765 VLPPHLSDQSSSSSHDDVGFIMTEAGTWAKATISDSADCSLSPDVDPVLAFQREGFGRQS 824

Query: 31  L 29
           +
Sbjct: 825 M 825

>DPO3A_THEAQ (Q9XDH5) DNA polymerase III alpha subunit (EC 2.7.7.7)|
          Length = 1220

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 86  AEALGVPLLPPSANKGTNFSQGANFAVMGATAL 184
           A ALG+P+LPP  N+      G +F V+G   L
Sbjct: 861 ARALGIPVLPPDVNR-----SGFDFKVVGEEIL 888

>UTP8_YEAST (P53276) U3 small nucleolar RNA-associated protein 8 (U3|
           snoRNA-associated protein 8)
          Length = 713

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +2

Query: 185 ELKYFRDNNVWSIPP-FNTSMKCQLEWFQEVKETVCSSPQECKEFFGKAL-FVFGEFGGN 358
           +L   +DN++ S    F   +K + E + E K+   S P     F  K L  +FG+F GN
Sbjct: 463 KLSALQDNDITSFDDIFFKELKIKEEHYTE-KDRYISDPG----FLNKVLDLIFGKFSGN 517

Query: 359 DY 364
           DY
Sbjct: 518 DY 519

>CO6_PANTR (P61134) Complement component C6 precursor|
          Length = 934

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 12/70 (17%)
 Frame = +2

Query: 191 KYFRDNNVWSIPPFNTSMKC------------QLEWFQEVKETVCSSPQECKEFFGKALF 334
           +Y    N W+ PP + S+ C            QL   Q   E +C SP+E      + L 
Sbjct: 743 RYTCQGNSWT-PPISNSLTCEKDTLTKLRGHCQLGQKQSGSECICMSPEEDCSHHSEDLC 801

Query: 335 VFGEFGGNDY 364
           VF +   NDY
Sbjct: 802 VF-DTDSNDY 810

>SYD_ANADE (Q2IKX7) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 603

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = -3

Query: 229 RRDAPHVVIPEVLELQSGGA---HHREVGALTEVGALVXXXXXXXXXXRLGQEVDDETAV 59
           R D PHVV+ +++    GG     H  V A   V A+            + +  +    +
Sbjct: 298 RFDMPHVVLTDLVRQHDGGGVPLMHEAVKAKGIVKAMRVPASANFSRTEIDKLEEYVKGM 357

Query: 58  GAAGVGRRELGHVGQ 14
           GA G+ R ++G  G+
Sbjct: 358 GAKGLARAKVGEGGE 372

>IF2A_THEAC (Q9HIX3) Translation initiation factor 2 alpha subunit|
           (eIF-2-alpha) (aIF2-alpha)
          Length = 254

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 11/55 (20%)
 Frame = +2

Query: 257 EWFQEVK-----ETVCS----SPQECKEFFGKALF-VFGE-FGGNDYSFAWKAEW 388
           EW  E K     E VCS    +P+ECKE FG+ L  +FG  F   + +     EW
Sbjct: 94  EWKNEQKADKLFEIVCSRLNRNPEECKEQFGRRLVELFGTLFAAFESAAQSNGEW 148

>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein|
          Length = 2480

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
 Frame = +1

Query: 124  EQGHQLQSGRQLRGDGRHRSGAQVLQ----G*QRVEHPAVQHLHEVPARVVPGGQGDCLL 291
            E+G QL+  ++  G+G+    AQ+ +    G + ++   VQ L EV      G QG+ L 
Sbjct: 1413 EEGVQLEGTKETEGEGQQEEEAQLEEIEETGGEGLQEEGVQ-LEEVKEGPEGGLQGEALE 1471

Query: 292  LPARVQGVFREGA 330
               + +G+  EG+
Sbjct: 1472 EGLKEEGLPEEGS 1484

>YHIN_ECOLI (P37631) Hypothetical protein yhiN|
          Length = 400

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 314 FFGKALFVFGEFGGNDYSFAWKAEWS 391
           F G+ + V G  GG ++ +AW + W+
Sbjct: 364 FIGEVMDVTGWLGGYNFQWAWSSAWA 389

>DPO3A_CHLPN (Q9Z7N8) DNA polymerase III alpha subunit (EC 2.7.7.7)|
          Length = 1240

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
 Frame = +2

Query: 62  GRLVIDFLAEALGVPLLPPSANKGTNF----SQGANFAVMGA 175
           G+L+ +  A+++G+P+LPP  N  +N      +G  FA MGA
Sbjct: 836 GKLIRE--AQSMGIPILPPHINVSSNHFVATDEGIRFA-MGA 874

>PDXT_THET8 (Q5SKD6) Glutamine amidotransferase subunit pdxT (EC 2.6.-.-)|
           (Glutamine amidotransferase glutaminase subunit pdxT)
          Length = 191

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +1

Query: 157 LRGDGRHRSGAQVLQG*QRVEHPAVQHLHEVPARVVPGGQGDCLLLPARVQGV 315
           L+GD R    A    G +  E    +HL  + A +VPGG+   +   AR  G+
Sbjct: 10  LQGDFREHKEALKRLGIEAKEVRKKEHLEGLKALIVPGGESTTIGKLAREYGI 62

>RGS6_CAEEL (Q18563) Regulator of G-protein signaling rgs-6|
          Length = 737

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 26/93 (27%), Positives = 34/93 (36%)
 Frame = +2

Query: 35  PPPYARCSNGRLVIDFLAEALGVPLLPPSANKGTNFSQGANFAVMGATALELKYFRDNNV 214
           P P A  S  R+     + A G P     A  GTNF   AN    G+ +        NNV
Sbjct: 499 PNPSAGTSQDRMASGVYSPATGGPSFASRAAAGTNFGGSANQVNAGSASTS-----SNNV 553

Query: 215 WSIPPFNTSMKCQLEWFQEVKETVCSSPQECKE 313
                 +   K +L  F+   E     P+  KE
Sbjct: 554 ------SEPSKNRLSIFKSKTEKKVVKPESEKE 580


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,144,493
Number of Sequences: 219361
Number of extensions: 934346
Number of successful extensions: 3177
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3173
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)