ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet75e12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein Length = 1020 Score = 347 bits (175), Expect = 1e-92 Identities = 182/183 (99%), Gaps = 1/183 (0%) Strand = Plus / Plus Query: 65 ctagcgagctaggcttggaggtgagcgaaaatgccggtcagcaggatcgccgtggggagc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34 ctagcgagctaggcttggaggtgagcgaaaatgccggtcagcaggatcgccgtggggagc 93 Query: 125 caccggg-ggtgtacgaggtcggcgccctcaaggcggcgctcgccgagttcatctccacg 183 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 caccgggaggtgtacgaggtcggcgccctcaaggcggcgctcgccgagttcatctccacg 153 Query: 184 ctcatcttcgtcttcgccggccagggctccggcatggccttcagcaagctgagccccgac 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 ctcatcttcgtcttcgccggccagggctccggcatggccttcagcaagctgagccccgac 213 Query: 244 ggc 246 ||| Sbjct: 214 ggc 216
>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA, complete cds Length = 1133 Score = 319 bits (161), Expect = 2e-84 Identities = 177/181 (97%), Gaps = 1/181 (0%) Strand = Plus / Plus Query: 67 agcgagctaggcttggaggtgagcgaaaatgccggtcagcaggatcgccgtggggagcca 126 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 agcgagctaggctcggaggtgagcgaaaatgccggtcagcaggatcgccgtggggagcca 126 Query: 127 ccggg-ggtgtacgaggtcggcgccctcaaggcggcgctcgccgagttcatctccacgct 185 ||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 ccgtgaggtgtacgaggtgggcgccctcaaggcggcgctcgccgagttcatctccacgct 186 Query: 186 catcttcgtcttcgccggccagggctccggcatggccttcagcaagctgagccccgacgg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 catcttcgtcttcgccggccagggctccggcatggccttcagcaagctgagccccgacgg 246 Query: 246 c 246 | Sbjct: 247 c 247
>gb|BT016300.1| Zea mays clone Contig133 mRNA sequence Length = 1112 Score = 170 bits (86), Expect = 1e-39 Identities = 132/146 (90%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 91 gaaaatgccggtcagcaggatcgccgtggggagccaccggg-ggtgtacgaggtcggcgc 149 |||||||||| ||| ||||||||| |||||||||||| || ||||||| | ||||| Sbjct: 94 gaaaatgccgatcaataggatcgccctggggagccaccaggaggtgtaccacccgggcgc 153 Query: 150 cctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggccaggg 209 ||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 154 cctcaaggcggcgttcgctgagttcatctccaccctcatcttcgtcttcgccggccaggg 213 Query: 210 ctccggcatggccttcagcaagctga 235 |||||||||||||||||||||||||| Sbjct: 214 ctccggcatggccttcagcaagctga 239
>gb|AY104464.1| Zea mays PCO114899 mRNA sequence Length = 1167 Score = 170 bits (86), Expect = 1e-39 Identities = 132/146 (90%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 91 gaaaatgccggtcagcaggatcgccgtggggagccaccggg-ggtgtacgaggtcggcgc 149 |||||||||| ||| ||||||||| |||||||||||| || ||||||| | ||||| Sbjct: 93 gaaaatgccgatcaataggatcgccctggggagccaccaggaggtgtaccacccgggcgc 152 Query: 150 cctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggccaggg 209 ||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 153 cctcaaggcggcgttcgctgagttcatctccaccctcatcttcgtcttcgccggccaggg 212 Query: 210 ctccggcatggccttcagcaagctga 235 |||||||||||||||||||||||||| Sbjct: 213 ctccggcatggccttcagcaagctga 238
>gb|AF037061.1|AF037061 Zea mays tonoplast intrinsic protein (ZmTIP1) mRNA, complete cds Length = 1097 Score = 170 bits (86), Expect = 1e-39 Identities = 132/146 (90%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 91 gaaaatgccggtcagcaggatcgccgtggggagccaccggg-ggtgtacgaggtcggcgc 149 |||||||||| ||| ||||||||| |||||||||||| || ||||||| | ||||| Sbjct: 90 gaaaatgccgatcaataggatcgccctggggagccaccaggaggtgtaccacccgggcgc 149 Query: 150 cctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggccaggg 209 ||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 150 cctcaaggcggcgttcgctgagttcatctccaccctcatcttcgtcttcgccggccaggg 209 Query: 210 ctccggcatggccttcagcaagctga 235 |||||||||||||||||||||||||| Sbjct: 210 ctccggcatggccttcagcaagctga 235
>gb|AY243803.1| Zea mays tonoplast water channel (TIP1-1) mRNA, complete cds Length = 1039 Score = 165 bits (83), Expect = 8e-38 Identities = 129/143 (90%), Gaps = 1/143 (0%) Strand = Plus / Plus Query: 94 aatgccggtcagcaggatcgccgtggggagccaccggg-ggtgtacgaggtcggcgccct 152 ||||||| ||| ||||||||| |||||||||||| || ||||||| | |||||||| Sbjct: 1 aatgccgatcaataggatcgccctggggagccaccaggaggtgtaccacccgggcgccct 60 Query: 153 caaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctc 212 |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 61 caaggcggcgttcgctgagttcatctccaccctcatcttcgtcttcgccggccagggctc 120 Query: 213 cggcatggccttcagcaagctga 235 ||||||||||||||||||||||| Sbjct: 121 cggcatggccttcagcaagctga 143
>emb|AJ242805.1|SST242805 Sporobolus stapfianus mRNA for putative gamma tonoplast intrinsic protein (TIP) Length = 1146 Score = 153 bits (77), Expect = 3e-34 Identities = 89/93 (95%) Strand = Plus / Plus Query: 145 ggcgccctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 134 ggcgccctcaaggcggcgctcgctgagttcatctccaccctcatcttcgtcttcgccggc 193 Query: 205 cagggctccggcatggccttcagcaagctgagc 237 |||||||||||| |||||| ||||||||||||| Sbjct: 194 cagggctccggcgtggcctacagcaagctgagc 226
>ref|XM_470213.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 149 bits (75), Expect = 5e-33 Identities = 115/127 (90%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 110 atcgccgtggggagccaccggg-ggtgtacgaggtcggcgccctcaaggcggcgctcgcc 168 ||||||||||||||||||| || ||||||| | || || |||||||||||| | ||| Sbjct: 16 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 75 Query: 169 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcagc 228 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcagc 135 Query: 229 aagctga 235 ||||||| Sbjct: 136 aagctga 142
>dbj|D25534.1|RICYK333 Oryza sativa yk333 mRNA for gamma-Tip, complete cds Length = 1080 Score = 149 bits (75), Expect = 5e-33 Identities = 115/127 (90%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 110 atcgccgtggggagccaccggg-ggtgtacgaggtcggcgccctcaaggcggcgctcgcc 168 ||||||||||||||||||| || ||||||| | || || |||||||||||| | ||| Sbjct: 94 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 153 Query: 169 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcagc 228 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcagc 213 Query: 229 aagctga 235 ||||||| Sbjct: 214 aagctga 220
>dbj|AK104123.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C12, full insert sequence Length = 1034 Score = 149 bits (75), Expect = 5e-33 Identities = 115/127 (90%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 110 atcgccgtggggagccaccggg-ggtgtacgaggtcggcgccctcaaggcggcgctcgcc 168 ||||||||||||||||||| || ||||||| | || || |||||||||||| | ||| Sbjct: 103 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 162 Query: 169 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcagc 228 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcagc 222 Query: 229 aagctga 235 ||||||| Sbjct: 223 aagctga 229
>dbj|AK068986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E16, full insert sequence Length = 1082 Score = 149 bits (75), Expect = 5e-33 Identities = 115/127 (90%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 110 atcgccgtggggagccaccggg-ggtgtacgaggtcggcgccctcaaggcggcgctcgcc 168 ||||||||||||||||||| || ||||||| | || || |||||||||||| | ||| Sbjct: 105 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 164 Query: 169 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcagc 228 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcagc 224 Query: 229 aagctga 235 ||||||| Sbjct: 225 aagctga 231
>dbj|AK060994.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E02, full insert sequence Length = 870 Score = 149 bits (75), Expect = 5e-33 Identities = 115/127 (90%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 110 atcgccgtggggagccaccggg-ggtgtacgaggtcggcgccctcaaggcggcgctcgcc 168 ||||||||||||||||||| || ||||||| | || || |||||||||||| | ||| Sbjct: 101 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 160 Query: 169 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcagc 228 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcagc 220 Query: 229 aagctga 235 ||||||| Sbjct: 221 aagctga 227
>dbj|AK058322.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B06, full insert sequence Length = 1055 Score = 149 bits (75), Expect = 5e-33 Identities = 115/127 (90%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 110 atcgccgtggggagccaccggg-ggtgtacgaggtcggcgccctcaaggcggcgctcgcc 168 ||||||||||||||||||| || ||||||| | || || |||||||||||| | ||| Sbjct: 101 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 160 Query: 169 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcagc 228 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcagc 220 Query: 229 aagctga 235 ||||||| Sbjct: 221 aagctga 227
>gb|AY389618.1| Hyacinthus orientalis mitochondrial tonoplast intrinsic protein (TIP1) mRNA, partial cds Length = 662 Score = 139 bits (70), Expect = 5e-30 Identities = 85/90 (94%) Strand = Plus / Plus Query: 144 cggcgccctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccgg 203 ||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||| Sbjct: 50 cggcgccctcaaggcagccctcgccgagttcatctccaccctcatcttcgtcttcgccgg 109 Query: 204 ccagggctccggcatggccttcagcaagct 233 ||| ||||||||||| |||||||||||||| Sbjct: 110 ccaaggctccggcatcgccttcagcaagct 139
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 133 bits (67), Expect = 3e-28 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 110 atcgccgtggggagccaccggg-ggtgtacgaggtcggcgccctcaaggcggcgctcgcc 168 ||||||||||||||||||| || ||||||| | || || |||||||||||| | ||| Sbjct: 2546220 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 2546161 Query: 169 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcag 227 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2546160 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcag 2546102
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 133 bits (67), Expect = 3e-28 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 110 atcgccgtggggagccaccggg-ggtgtacgaggtcggcgccctcaaggcggcgctcgcc 168 ||||||||||||||||||| || ||||||| | || || |||||||||||| | ||| Sbjct: 123874 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 123933 Query: 169 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcag 227 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123934 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcag 123992
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 133 bits (67), Expect = 3e-28 Identities = 107/119 (89%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 110 atcgccgtggggagccaccggg-ggtgtacgaggtcggcgccctcaaggcggcgctcgcc 168 ||||||||||||||||||| || ||||||| | || || |||||||||||| | ||| Sbjct: 2546330 atcgccgtggggagccaccaggaggtgtaccacccgggtgcactcaaggcggcgttggcc 2546271 Query: 169 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttcag 227 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2546270 gagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttcag 2546212
>dbj|AB126924.1| Prunus persica Pr-gTIP1 mRNA for tonoplast intrinsic protein, complete cds Length = 1143 Score = 109 bits (55), Expect = 4e-21 Identities = 61/63 (96%) Strand = Plus / Plus Query: 163 ctcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcc 222 ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 170 ctcgccgagttcatctccacgctgatcttcgtcttcgccggcgagggctccggcatggcc 229 Query: 223 ttc 225 ||| Sbjct: 230 ttc 232
>ref|NM_189497.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 95.6 bits (48), Expect = 6e-17 Identities = 66/72 (91%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 223 |||||||||||||||| | ||||||||||||||||||||| ||| ||||||||||||| Sbjct: 71 tcgccgagttcatctctatgctcatcttcgtcttcgccggatcgggatccggcatggcct 130 Query: 224 tcagcaagctga 235 |||||||||||| Sbjct: 131 tcagcaagctga 142
>dbj|AK111768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066H10, full insert sequence Length = 1346 Score = 95.6 bits (48), Expect = 6e-17 Identities = 66/72 (91%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 223 |||||||||||||||| | ||||||||||||||||||||| ||| ||||||||||||| Sbjct: 95 tcgccgagttcatctctatgctcatcttcgtcttcgccggatcgggatccggcatggcct 154 Query: 224 tcagcaagctga 235 |||||||||||| Sbjct: 155 tcagcaagctga 166
>dbj|AK111747.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050B20, full insert sequence Length = 1149 Score = 95.6 bits (48), Expect = 6e-17 Identities = 66/72 (91%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 223 |||||||||||||||| | ||||||||||||||||||||| ||| ||||||||||||| Sbjct: 144 tcgccgagttcatctctatgctcatcttcgtcttcgccggatcgggatccggcatggcct 203 Query: 224 tcagcaagctga 235 |||||||||||| Sbjct: 204 tcagcaagctga 215
>dbj|AB114829.1| Oryza sativa (japonica cultivar-group) OsTIP1 mRNA for tonoplast intrinsic protein, complete cds Length = 970 Score = 95.6 bits (48), Expect = 6e-17 Identities = 66/72 (91%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 223 |||||||||||||||| | ||||||||||||||||||||| ||| ||||||||||||| Sbjct: 81 tcgccgagttcatctctatgctcatcttcgtcttcgccggatcgggatccggcatggcct 140 Query: 224 tcagcaagctga 235 |||||||||||| Sbjct: 141 tcagcaagctga 152
>emb|AJ314583.1|POC314583 Posidonia oceanica mRNA for putative tonoplast intrinsic protein (tip1 gene) Length = 1112 Score = 89.7 bits (45), Expect = 4e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 147 cgccctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggcca 206 |||||||||||| | |||||||||||||||||||| ||||||||||||||||||||| | Sbjct: 133 cgccctcaaggccaccctcgccgagttcatctccaccctcatcttcgtcttcgccggcga 192 Query: 207 gggctccggcatggcct 223 ||||| ||||| |||| Sbjct: 193 aggctctggcatcgcct 209
>emb|X95650.1|TGTIP1GEN T.gesneriana mRNA for tonoplast intrinsic protein Length = 992 Score = 83.8 bits (42), Expect = 2e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 151 ctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggccagggc 210 |||||||| ||||| || ||||||||||| ||| | |||||||||| ||||||||||||| Sbjct: 81 ctcaaggcagcgctggctgagttcatctctacgttgatcttcgtctacgccggccagggc 140 Query: 211 tccggcatggcctt 224 |||||||| ||||| Sbjct: 141 tccggcatagcctt 154
>gb|AF326500.1|AF326500 Zea mays tonoplast membrane integral protein ZmTIP1-2 mRNA, complete cds Length = 1021 Score = 83.8 bits (42), Expect = 2e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 223 ||||||||||||||||||||||||||||||||||||||||| || || || ||||||| Sbjct: 85 tcgccgagttcatctccacgctcatcttcgtcttcgccggctcaggatcggggatggcct 144 Query: 224 tcagcaagct 233 |||| ||||| Sbjct: 145 tcagtaagct 154
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 81.8 bits (41), Expect = 9e-13 Identities = 62/69 (89%) Strand = Plus / Minus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 223 |||||||||||||||| | ||||||||||||||||||||| ||| ||||||||||||| Sbjct: 43109437 tcgccgagttcatctctatgctcatcttcgtcttcgccggatcgggatccggcatggcct 43109378 Query: 224 tcagcaagc 232 |||| |||| Sbjct: 43109377 tcagtaagc 43109369
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 81.8 bits (41), Expect = 9e-13 Identities = 62/69 (89%) Strand = Plus / Minus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 223 |||||||||||||||| | ||||||||||||||||||||| ||| ||||||||||||| Sbjct: 106466 tcgccgagttcatctctatgctcatcttcgtcttcgccggatcgggatccggcatggcct 106407 Query: 224 tcagcaagc 232 |||| |||| Sbjct: 106406 tcagtaagc 106398
>dbj|AB048248.1| Pyrus communis Py-gTIP mRNA for gamma tonoplast intrinsic protein, complete cds Length = 1122 Score = 79.8 bits (40), Expect = 4e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 166 gccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggc 221 |||||||||||||| |||||||||||||| ||||||||| |||||||||| ||||| Sbjct: 144 gccgagttcatctcgacgctcatcttcgttttcgccggcgagggctccggaatggc 199
>gb|AY525641.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;3 mRNA, complete cds Length = 829 Score = 73.8 bits (37), Expect = 2e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 119 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 159
>gb|AY525639.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;1 mRNA, complete cds Length = 817 Score = 73.8 bits (37), Expect = 2e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 123 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 163
>gb|U86763.1|TAU86763 Triticum aestivum delta-type tonoplast intrinsic protein mRNA, complete cds Length = 1067 Score = 73.8 bits (37), Expect = 2e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 125 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 165
>dbj|AK099015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H02, full insert sequence Length = 1202 Score = 71.9 bits (36), Expect = 9e-10 Identities = 63/72 (87%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 223 ||||||||||||||||||| ||| ||||||||||||||||| ||||||| ||| |||| Sbjct: 160 tcgccgagttcatctccaccctcgtcttcgtcttcgccggcgtcggctccgccatcgcct 219 Query: 224 tcagcaagctga 235 || |||||||| Sbjct: 220 acaccaagctga 231
>emb|AJ133748.1|PAB133748 Picea abies mRNA for major intrinsic protein Length = 1168 Score = 67.9 bits (34), Expect = 1e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 166 gccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 223 ||||||||| ||||||||||||||||||||||||| ||| | || |||| |||||||| Sbjct: 182 gccgagttcttctccacgctcatcttcgtcttcgctggcgaaggatccgtcatggcct 239
>gb|AY525640.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;2 mRNA, complete cds Length = 853 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||| |||||||||||||| ||||||||||||||||||||| Sbjct: 122 tcgctgagttcatctccaccctcatcttcgtcttcgccggc 162
>gb|AF521135.1| Kandelia candel tonoplast intrinsic protein (TIP) mRNA, complete cds Length = 1099 Score = 65.9 bits (33), Expect = 6e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 166 gccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttc 225 ||||||||||||||||| || || ||||| ||||||||| | || ||||||||||||||| Sbjct: 171 gccgagttcatctccacccttattttcgtattcgccggcgaaggttccggcatggccttc 230 Query: 226 a 226 | Sbjct: 231 a 231
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 13250274 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 13250314
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 12084 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 12124
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 167462 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 167502
>dbj|AK104464.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C06, full insert sequence Length = 1194 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 157 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 197
>dbj|AK104377.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G09, full insert sequence Length = 1196 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 159 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 199
>dbj|AK104270.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F03, full insert sequence Length = 1214 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 159 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 199
>dbj|AK100193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036J06, full insert sequence Length = 1074 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 158 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 198
>dbj|AK099616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J20, full insert sequence Length = 1197 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 160 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 200
>dbj|AK099141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055A02, full insert sequence Length = 1195 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 158 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 198
>dbj|AK073531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044F19, full insert sequence Length = 1220 Score = 65.9 bits (33), Expect = 6e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 164 tcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 ||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 158 tcgccgagttcatctccaccctcgtcttcgtcttcgccggc 198
>gb|AF133531.1|AF133531 Mesembryanthemum crystallinum water channel protein MipI (MipI) mRNA, complete cds Length = 1035 Score = 60.0 bits (30), Expect = 3e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 148 gccctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggccag 207 ||||||||||| || | || ||||||||||||| |||||| || ||||| || || || Sbjct: 125 gccctcaaggctgcattggctgagttcatctccatgctcatttttgtctttgctggacaa 184 Query: 208 ggctccggcatggccttcagcaagct 233 ||||| |||||||| ||||||||||| Sbjct: 185 ggctctggcatggcattcagcaagct 210
>dbj|AB206105.1| Mimosa pudica tip1;2 mRNA for tonoplast intrinsic protein 1;2, complete cds Length = 963 Score = 58.0 bits (29), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 169 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggc 221 ||||||||||||| ||||||||| || |||||||| | |||||||||||||| Sbjct: 129 gagttcatctccatgctcatctttgtgttcgccggtgaaggctccggcatggc 181
>gb|U43291.1|MCU43291 Mesembryanthemum crystallinum tonoplast intrinsic protein (TIP) mRNA, complete cds Length = 1235 Score = 58.0 bits (29), Expect = 1e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 169 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttc 225 |||||||||||||| | |||||||||||||| ||| |||| || |||||||||||| Sbjct: 127 gagttcatctccaccttgatcttcgtcttcgctggcgagggttctggcatggccttc 183
>gb|AF275315.1|AF275315 Lotus japonicus water-selective transport intrinsic membrane protein 1 mRNA, complete cds Length = 1162 Score = 56.0 bits (28), Expect = 5e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 169 gagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||||| |||||||||||||||||||| Sbjct: 135 gagttcatctccaccttcatcttcgtcttcgccggc 170
>dbj|AP004479.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03H13, TM0012b, complete sequence Length = 41820 Score = 56.0 bits (28), Expect = 5e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 169 gagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||||| |||||||||||||||||||| Sbjct: 10770 gagttcatctccaccttcatcttcgtcttcgccggc 10735
>ref|XM_429115.1| PREDICTED: Gallus gallus similar to aquaporin 5 (LOC431562), partial mRNA Length = 1194 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 168 cgagttcatctccacgctcatcttcgtcttc 198 ||||||||||||||| ||||||||||||||| Sbjct: 48 cgagttcatctccactctcatcttcgtcttc 78
>ref|XM_428856.1| PREDICTED: Gallus gallus similar to Aquaporin 5 (LOC431305), mRNA Length = 1233 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 168 cgagttcatctccacgctcatcttcgtcttc 198 ||||||||||||||| ||||||||||||||| Sbjct: 48 cgagttcatctccactctcatcttcgtcttc 78
>emb|AJ243309.1|PSA243309 Pisum sativum mRNA for putative tonoplast intrinsic protein (gene tip1-1) Length = 1104 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 169 gagttcatctccacgctcatcttcgtcttcgccgg 203 |||||||||||||| ||||||||||||||||||| Sbjct: 151 gagttcatctccactttcatcttcgtcttcgccgg 185
>gb|AF326501.1|AF326501 Zea mays tonoplast membrane integral protein ZmTIP2-1 mRNA, complete cds Length = 1110 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 166 gccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| |||| ||| ||||||||||||||||| Sbjct: 294 gccgagttcatcgccaccctcctcttcgtcttcgccggc 332
>gb|AY105015.1| Zea mays PCO137646 mRNA sequence Length = 1238 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 166 gccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| |||| ||| ||||||||||||||||| Sbjct: 293 gccgagttcatcgccaccctcctcttcgtcttcgccggc 331
>ref|NM_113559.3| Arabidopsis thaliana TIP2 (TONOPLAST INTRINSIC PROTEIN 2); water channel AT3G26520 (TIP2) mRNA, complete cds Length = 1201 Score = 50.1 bits (25), Expect = 0.003 Identities = 43/49 (87%) Strand = Plus / Plus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 178 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 226
>gb|AY079114.1| Arabidopsis thaliana AT3g26520/MFE16_3 mRNA, complete cds Length = 762 Score = 50.1 bits (25), Expect = 0.003 Identities = 43/49 (87%) Strand = Plus / Plus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 66 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 114
>gb|AF419613.1|AF419613 Arabidopsis thaliana AT3g26520/MFE16_3 mRNA, complete cds Length = 1061 Score = 50.1 bits (25), Expect = 0.003 Identities = 43/49 (87%) Strand = Plus / Plus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 128 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 176
>gb|AF428341.1|AF428341 Arabidopsis thaliana AT3g26520/MFE16_3 mRNA, complete cds Length = 1066 Score = 50.1 bits (25), Expect = 0.003 Identities = 43/49 (87%) Strand = Plus / Plus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 133 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 181
>gb|AF004393.1|AF004393 Arabidopsis thaliana salt-stress induced tonoplast intrinsic protein mRNA, complete cds Length = 1072 Score = 50.1 bits (25), Expect = 0.003 Identities = 43/49 (87%) Strand = Plus / Plus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 80 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 128
>gb|AF326502.1|AF326502 Zea mays tonoplast membrane integral protein ZmTIP2-2 mRNA, complete cds Length = 1073 Score = 50.1 bits (25), Expect = 0.003 Identities = 49/57 (85%) Strand = Plus / Plus Query: 169 gagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggccttc 225 ||||||||| |||| ||| ||||||||||||||||| ||| |||| ||| |||||| Sbjct: 137 gagttcatcgccaccctcctcttcgtcttcgccggcgtgggttccgccatcgccttc 193
>emb|BX822807.1|CNS0A75T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1010 Score = 50.1 bits (25), Expect = 0.003 Identities = 43/49 (87%) Strand = Plus / Plus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 116 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 164
>emb|BX822624.1|CNS0A742 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB53ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1020 Score = 50.1 bits (25), Expect = 0.003 Identities = 43/49 (87%) Strand = Plus / Plus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 114 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 162
>emb|BX824073.1|CNS0A6T2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZE06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1008 Score = 50.1 bits (25), Expect = 0.003 Identities = 43/49 (87%) Strand = Plus / Plus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 114 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 162
>emb|BX822975.1|CNS0A733 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB78ZD01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1054 Score = 50.1 bits (25), Expect = 0.003 Identities = 43/49 (87%) Strand = Plus / Plus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 105 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 153
>emb|BX824311.1|CNS0A6PE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 995 Score = 50.1 bits (25), Expect = 0.003 Identities = 43/49 (87%) Strand = Plus / Plus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 123 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 171
>emb|BX823607.1|CNS0A6MK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZB09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1012 Score = 50.1 bits (25), Expect = 0.003 Identities = 43/49 (87%) Strand = Plus / Plus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 114 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 162
>emb|BX842163.1|CNS09YDT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZE01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 921 Score = 50.1 bits (25), Expect = 0.003 Identities = 43/49 (87%) Strand = Plus / Plus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 114 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 162
>emb|BX842138.1|CNS09YDN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZD02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1062 Score = 50.1 bits (25), Expect = 0.003 Identities = 43/49 (87%) Strand = Plus / Plus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 114 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 162
>dbj|AB028611.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MFE16 Length = 82646 Score = 50.1 bits (25), Expect = 0.003 Identities = 43/49 (87%) Strand = Plus / Minus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 16232 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccggc 16184
>gb|AF057137.1|AF057137 Arabidopsis thaliana gamma tonoplast intrinsic protein 2 (TIP2) mRNA, complete cds Length = 1035 Score = 48.1 bits (24), Expect = 0.013 Identities = 42/48 (87%) Strand = Plus / Plus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccgg 203 |||||||||||| ||||| ||||| || | ||||||||||||||||| Sbjct: 119 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcgccgg 166
>dbj|D45077.1|CUCMP23A Cucurbita cv. Kurokawa Amakuri mRNA for MP23 precursor, complete cds Length = 1249 Score = 48.1 bits (24), Expect = 0.013 Identities = 33/36 (91%) Strand = Plus / Plus Query: 169 gagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||| ||||| |||||||||||||||||||| Sbjct: 323 gagttcatttccactttcatcttcgtcttcgccggc 358
>emb|Y08161.1|NTAQP1 N.tabacum mRNA for aquaporin 1 Length = 978 Score = 46.1 bits (23), Expect = 0.051 Identities = 68/83 (81%) Strand = Plus / Plus Query: 151 ctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggccagggc 210 ||||||||||| | || |||||||||| || || |||||||| ||||| || ||||| Sbjct: 118 ctcaaggcggccttggcggagttcatctgtaccctgatcttcgttttcgcaggtcagggt 177 Query: 211 tccggcatggccttcagcaagct 233 || |||||||| |||| |||||| Sbjct: 178 tctggcatggctttcaacaagct 200
>gb|AY243804.1| Zea mays tonoplast water channel mRNA, complete cds Length = 968 Score = 46.1 bits (23), Expect = 0.051 Identities = 35/39 (89%) Strand = Plus / Plus Query: 166 gccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||||| ||||||| ||||||||| Sbjct: 70 gccgagttcatcgccacgctgctcttcgtgttcgccggc 108
>gb|AY106931.1| Zea mays PCO140073 mRNA sequence Length = 1069 Score = 46.1 bits (23), Expect = 0.051 Identities = 35/39 (89%) Strand = Plus / Plus Query: 166 gccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||||| ||||||| ||||||||| Sbjct: 147 gccgagttcatcgccacgctgctcttcgtgttcgccggc 185
>gb|AF057183.1|AF057183 Zea mays putative tonoplast aquaporin mRNA, complete cds Length = 1060 Score = 46.1 bits (23), Expect = 0.051 Identities = 35/39 (89%) Strand = Plus / Plus Query: 166 gccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||||||||| ||||||| ||||||| ||||||||| Sbjct: 129 gccgagttcatcgccacgctgctcttcgtgttcgccggc 167
>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete sequence Length = 113193 Score = 44.1 bits (22), Expect = 0.20 Identities = 25/26 (96%) Strand = Plus / Plus Query: 188 tcttcgtcttcgccggccagggctcc 213 ||||||||||| |||||||||||||| Sbjct: 16593 tcttcgtcttccccggccagggctcc 16618
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 44.1 bits (22), Expect = 0.20 Identities = 25/26 (96%) Strand = Plus / Minus Query: 188 tcttcgtcttcgccggccagggctcc 213 ||||||||||| |||||||||||||| Sbjct: 124531 tcttcgtcttccccggccagggctcc 124506
>emb|AJ278573.1|SNA278573 Streptomyces natalensis pimaricin biosynthetic gene cluster Length = 84985 Score = 44.1 bits (22), Expect = 0.20 Identities = 25/26 (96%) Strand = Plus / Minus Query: 188 tcttcgtcttcgccggccagggctcc 213 ||||||||||| |||||||||||||| Sbjct: 32158 tcttcgtcttccccggccagggctcc 32133
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 95 atgccggtcagcaggatcgccg 116 |||||||||||||||||||||| Sbjct: 270969 atgccggtcagcaggatcgccg 270990
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 0.80 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 gcgccctcaaggcggcgctcg 166 ||||||||||||||||||||| Sbjct: 428262 gcgccctcaaggcggcgctcg 428282
>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster, complete sequence Length = 99892 Score = 42.1 bits (21), Expect = 0.80 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 tcttcgtcttcgccggccagggctc 212 ||||||||||| ||||||||||||| Sbjct: 57565 tcttcgtcttccccggccagggctc 57589 Score = 42.1 bits (21), Expect = 0.80 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 tcttcgtcttcgccggccagggctc 212 ||||||||||| ||||||||||||| Sbjct: 35112 tcttcgtcttccccggccagggctc 35136
>ref|NM_001009273.1| Ovis aries aquaporin 5 (AQP5), mRNA Length = 815 Score = 42.1 bits (21), Expect = 0.80 Identities = 42/49 (85%) Strand = Plus / Plus Query: 150 cctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttc 198 ||||||||||| | |||| |||||| | |||| ||||||||||||||| Sbjct: 42 cctcaaggcggtgttcgcagagttcctggccaccctcatcttcgtcttc 90
>gb|AY177613.1| Ovis aries aquaporin 5 (AQP5) mRNA, complete cds Length = 815 Score = 42.1 bits (21), Expect = 0.80 Identities = 42/49 (85%) Strand = Plus / Plus Query: 150 cctcaaggcggcgctcgccgagttcatctccacgctcatcttcgtcttc 198 ||||||||||| | |||| |||||| | |||| ||||||||||||||| Sbjct: 42 cctcaaggcggtgttcgcagagttcctggccaccctcatcttcgtcttc 90
>gb|AF118381.1|AF118381 Brassica napus tonoplast intrinsic protein (gamma-TIP2) mRNA, complete cds Length = 1020 Score = 42.1 bits (21), Expect = 0.80 Identities = 42/49 (85%) Strand = Plus / Plus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcgccggc 204 |||||| ||||| ||||| ||||| || | |||||||||||||||||| Sbjct: 75 ggcggccctcgctgagtttatctcgactttgatcttcgtcttcgccggc 123
>ref|XM_467137.1| Oryza sativa (japonica cultivar-group), mRNA Length = 747 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 169 gagttcatctccacgctcatcttcgtcttcgc 200 ||||||||| |||| ||| ||||||||||||| Sbjct: 70 gagttcatcgccaccctcctcttcgtcttcgc 101
>ref|NM_197137.1| Oryza sativa (japonica cultivar-group) putative beta-tonoplast intrinsic protein (OSJNBa0051D19.19), mRNA Length = 1186 Score = 40.1 bits (20), Expect = 3.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 186 catcttcgtcttcgccggccagggctcc 213 ||||||||||||||||| | |||||||| Sbjct: 259 catcttcgtcttcgccgccgagggctcc 286
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 atgccggtcagcaggatcgc 114 |||||||||||||||||||| Sbjct: 1266308 atgccggtcagcaggatcgc 1266327
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cggcgctcgccgagttcatc 177 |||||||||||||||||||| Sbjct: 141835 cggcgctcgccgagttcatc 141816
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cggccagggctccggcatgg 220 |||||||||||||||||||| Sbjct: 131575 cggccagggctccggcatgg 131594
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 40.1 bits (20), Expect = 3.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 186 catcttcgtcttcgccggccagggctcc 213 ||||||||||||||||| | |||||||| Sbjct: 26891 catcttcgtcttcgccgccgagggctcc 26864
>emb|X95952.1|HAAP H.annuus mRNA for aquaporin Length = 931 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 169 gagttcatctccacgctcatcttcgtcttcgc 200 |||||||||||||| || ||||||||||||| Sbjct: 122 gagttcatctccacccttctcttcgtcttcgc 153
>emb|AJ505006.1|POL505006 Sorangium cellulosum spiG gene (partial), spiH gene, spiI gene, spiJ gene, spiK gene, spiL gene and spiZ gene Length = 48000 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 cttcgtcttcgccggccagggctc 212 |||||||||| ||||||||||||| Sbjct: 4273 cttcgtcttccccggccagggctc 4296
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 cttcgtcttcgccggccagggctc 212 ||||| |||||||||||||||||| Sbjct: 27998 cttcgccttcgccggccagggctc 28021
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tcgtcttcgccggccagggc 210 |||||||||||||||||||| Sbjct: 3460935 tcgtcttcgccggccagggc 3460916
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ctcaaggcggcgctcgccga 170 |||||||||||||||||||| Sbjct: 29799 ctcaaggcggcgctcgccga 29780
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 3.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 186 catcttcgtcttcgccggccagggctcc 213 ||||||||||||||||| | |||||||| Sbjct: 18186237 catcttcgtcttcgccgccgagggctcc 18186264
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cggcgctcgccgagttcatc 177 |||||||||||||||||||| Sbjct: 27266867 cggcgctcgccgagttcatc 27266848
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 169 gagttcatctccacgctcatcttcgtcttcgc 200 ||||||||| |||| ||| ||||||||||||| Sbjct: 26627994 gagttcatcgccaccctcctcttcgtcttcgc 26627963
>gb|AF342809.1|AF342809 Zea mays tonoplast membrane integral protein ZmTIP3-2 mRNA, complete cds Length = 1156 Score = 40.1 bits (20), Expect = 3.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 167 ccgagttcatctccacgctcatcttcgtcttcgccg 202 ||||||||||| |||| ||||||||||||||||| Sbjct: 202 ccgagttcatcgccaccgccatcttcgtcttcgccg 237
>gb|AF326509.1|AF326509 Zea mays tonoplast membrane integral protein ZmTIP5-1 mRNA, complete cds Length = 1021 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ctcgccgagttcatctccac 182 |||||||||||||||||||| Sbjct: 119 ctcgccgagttcatctccac 138
>gb|AF326504.1|AF326504 Zea mays tonoplast membrane integral protein ZmTIP3-1 mRNA, complete cds Length = 989 Score = 40.1 bits (20), Expect = 3.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 167 ccgagttcatctccacgctcatcttcgtcttcgccg 202 ||||||||||| |||| ||||||||||||||||| Sbjct: 139 ccgagttcatcgccaccgccatcttcgtcttcgccg 174
>emb|BX842211.1|CNS09YE1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZH05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1014 Score = 40.1 bits (20), Expect = 3.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 156 ggcggcgctcgccgagttcatctccacgctcatcttcgtcttcg 199 |||||||||||| ||||| ||||| || | ||||||||||||| Sbjct: 102 ggcggcgctcgctgagtttatctcgactttgatcttcgtcttcg 145
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 169 gagttcatctccacgctcatcttcgtcttcgc 200 ||||||||| |||| ||| ||||||||||||| Sbjct: 170375 gagttcatcgccaccctcctcttcgtcttcgc 170344
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_F09 Length = 139371 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 169 gagttcatctccacgctcatcttcgtcttcgc 200 ||||||||| |||| ||| ||||||||||||| Sbjct: 62155 gagttcatcgccaccctcctcttcgtcttcgc 62124
>dbj|AK111931.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C03, full insert sequence Length = 1200 Score = 40.1 bits (20), Expect = 3.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 186 catcttcgtcttcgccggccagggctcc 213 ||||||||||||||||| | |||||||| Sbjct: 268 catcttcgtcttcgccgccgagggctcc 295
>dbj|AB114830.1| Oryza sativa (japonica cultivar-group) OsTIP2 mRNA for tonoplast intrinsic protein, complete cds Length = 1013 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 169 gagttcatctccacgctcatcttcgtcttcgc 200 ||||||||| |||| ||| ||||||||||||| Sbjct: 143 gagttcatcgccaccctcctcttcgtcttcgc 174
>dbj|AB114828.1| Oryza sativa (japonica cultivar-group) OsTIP3 mRNA for tonoplast intrinsic protein, complete cds Length = 1178 Score = 40.1 bits (20), Expect = 3.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 186 catcttcgtcttcgccggccagggctcc 213 ||||||||||||||||| | |||||||| Sbjct: 251 catcttcgtcttcgccgccgagggctcc 278
>dbj|AK108674.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H12, full insert sequence Length = 1783 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 cggcgctcgccgagttcatc 177 |||||||||||||||||||| Sbjct: 403 cggcgctcgccgagttcatc 422
>dbj|AK106383.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E03, full insert sequence Length = 1787 Score = 40.1 bits (20), Expect = 3.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 186 catcttcgtcttcgccggccagggctcc 213 ||||||||||||||||| | |||||||| Sbjct: 922 catcttcgtcttcgccgccgagggctcc 895
>gb|AY103628.1| Zea mays PCO109231 mRNA sequence Length = 1907 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 acgctcatcttcgtcttcgccggc 204 ||||||||||||||| |||||||| Sbjct: 1492 acgctcatcttcgtcctcgccggc 1515
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 tcttcgtcttcgccggccagggct 211 ||||||||||| |||||||||||| Sbjct: 82695 tcttcgtcttccccggccagggct 82672
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 3.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 186 catcttcgtcttcgccggccagggctcc 213 ||||||||||||||||| | |||||||| Sbjct: 18195490 catcttcgtcttcgccgccgagggctcc 18195517
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 169 gagttcatctccacgctcatcttcgtcttcgc 200 ||||||||| |||| ||| ||||||||||||| Sbjct: 332808 gagttcatcgccaccctcctcttcgtcttcgc 332777 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 169 gagttcatctccacgctcatcttcgtcttcgc 200 ||||||||| |||| ||| ||||||||||||| Sbjct: 249840 gagttcatcgccaccctcctcttcgtcttcgc 249871
>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence Length = 536165 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ctcaaggcggcgctcgccga 170 |||||||||||||||||||| Sbjct: 274352 ctcaaggcggcgctcgccga 274333 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,157,814 Number of Sequences: 3902068 Number of extensions: 1157814 Number of successful extensions: 26897 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 26306 Number of HSP's gapped (non-prelim): 585 length of query: 246 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 224 effective length of database: 17,147,199,772 effective search space: 3840972748928 effective search space used: 3840972748928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
