ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet75e09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197868.1| Oryza sativa (japonica cultivar-group) putative... 210 2e-51
2gb|AY536428.1| Oryza sativa MYC protein mRNA, complete cds 210 2e-51
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 210 2e-51
4gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003... 210 2e-51
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 210 2e-51
6gb|AF061107.1|AF061107 Zea mays transcription factor MYC7E mRNA,... 186 3e-44
7gb|AY109646.1| Zea mays CL1599_-1 mRNA sequence 159 6e-36
8gb|U18349.1|PVU18349 Phaseolus vulgaris phaseolin G-box binding ... 80 5e-12
9ref|NM_191645.1| Oryza sativa (japonica cultivar-group), predic... 78 2e-11
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
11dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
12dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
13dbj|AK064946.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
14gb|U18348.1|PVU18348 Phaseolus vulgaris phaseolin G-box binding ... 72 1e-09
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
16emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4,... 62 1e-06
17gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 46 0.064
18gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 46 0.064
19emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ... 44 0.25
20dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 44 0.25
21gb|AY625684.1| Triticum aestivum bHLH transcription factor (bHLH... 44 0.25
22ref|XM_471697.1| Oryza sativa (japonica cultivar-group), predic... 42 1.0
23gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.0
24dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
25dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.0
26dbj|AB040744.1| Oryza sativa RERJ1 mRNA for Transcription Factor... 42 1.0
27dbj|AP007254.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
28dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.0
29dbj|AP006525.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
30dbj|AK105756.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
31dbj|AK067836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
32gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.0
33ref|NM_117738.2| Arabidopsis thaliana DNA binding / transcriptio... 40 4.0
34ref|XM_469308.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.0
35gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.0
36gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 geno... 40 4.0
37emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 4.0
38gb|AC153144.4| Mus musculus BAC clone RP23-220J15 from chromosom... 40 4.0
39emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, ... 40 4.0
40gb|DQ098104.1| Rhodococcus aetherivorans strain I24 putative ben... 40 4.0
41dbj|AB223617.1| Aspergillus oryzae cDNA, contig sequence: AoEST0455 40 4.0
42gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 4.0
43dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 40 4.0
44gb|AF251688.1|AF251688 Arabidopsis thaliana putative transcripti... 40 4.0
45gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 40 4.0
46gb|AY057626.1| Arabidopsis thaliana AT4g16430/dl4240w mRNA, comp... 40 4.0
47gb|AF428368.1|AF428368 Arabidopsis thaliana AT4g16430/dl4240w mR... 40 4.0
48gb|BC028266.1| Mus musculus zinc finger, MYND domain containing ... 40 4.0
49dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
50gb|AC016910.6| Homo sapiens BAC clone RP11-460B1 from 2, complet... 40 4.0
51gb|BT002301.1| Arabidopsis thaliana At4g16430/dl4240w mRNA, comp... 40 4.0
52dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.0
53gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipie... 40 4.0 
>ref|NM_197868.1| Oryza sativa (japonica cultivar-group) putative MYC transcription
            factor (OSJNBa0003O19.20), mRNA
          Length = 2067

 Score =  210 bits (106), Expect = 2e-51
 Identities = 173/194 (89%), Gaps = 1/194 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    agcggttctacgcgctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcac 60
            |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 1580 agcgcttctacgcgctgcgcgccgtggtgcccaacgtgtccaagatggacaaggcgtcgc 1639

                                                                        
Query: 61   tgctgggcgacgccatctcctacatcaacgagct-cgcggtaagatgacggcgctggagt 119
            |||||||||||||||||||||||||||||||||| || || ||| | |||||||||||| 
Sbjct: 1640 tgctgggcgacgccatctcctacatcaacgagctccgggggaagctcacggcgctggaga 1699

                                                                        
Query: 120  cggacaaggagacgctccactcccaaattgaggcgctgaagaaggagcgcgacgcccggc 179
            |||||||||||||||| || || || || ||| |||| ||||||||||| ||||| ||||
Sbjct: 1700 cggacaaggagacgctgcagtcgcagatggagtcgctcaagaaggagcgggacgcgcggc 1759

                          
Query: 180  cggccgcgccgtcg 193
            || | |||||||||
Sbjct: 1760 cgccggcgccgtcg 1773



 Score =  153 bits (77), Expect = 4e-34
 Identities = 86/89 (96%)
 Strand = Plus / Plus

                                                                        
Query: 214  cggggcgcggtgccacgcggtggagatcgaggccaagatcctggggctggaggcgatgat 273
            |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 1791 cggggcgcggtgccacgcggtggagatcgaggccaagatccttgggctggaggccatgat 1850

                                         
Query: 274  ccgcgtgcagtgccacaagcgcaaccacc 302
            ||||||||||||||||||||| |||||||
Sbjct: 1851 ccgcgtgcagtgccacaagcggaaccacc 1879
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>gb|AY536428.1| Oryza sativa MYC protein mRNA, complete cds
          Length = 2100

 Score =  210 bits (106), Expect = 2e-51
 Identities = 173/194 (89%), Gaps = 1/194 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    agcggttctacgcgctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcac 60
            |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 1613 agcgcttctacgcgctgcgcgccgtggtgcccaacgtgtccaagatggacaaggcgtcgc 1672

                                                                        
Query: 61   tgctgggcgacgccatctcctacatcaacgagct-cgcggtaagatgacggcgctggagt 119
            |||||||||||||||||||||||||||||||||| || || ||| | |||||||||||| 
Sbjct: 1673 tgctgggcgacgccatctcctacatcaacgagctccgggggaagctcacggcgctggaga 1732

                                                                        
Query: 120  cggacaaggagacgctccactcccaaattgaggcgctgaagaaggagcgcgacgcccggc 179
            |||||||||||||||| || || || || ||| |||| ||||||||||| ||||| ||||
Sbjct: 1733 cggacaaggagacgctgcagtcgcagatggagtcgctcaagaaggagcgggacgcgcggc 1792

                          
Query: 180  cggccgcgccgtcg 193
            || | |||||||||
Sbjct: 1793 cgccggcgccgtcg 1806



 Score =  153 bits (77), Expect = 4e-34
 Identities = 86/89 (96%)
 Strand = Plus / Plus

                                                                        
Query: 214  cggggcgcggtgccacgcggtggagatcgaggccaagatcctggggctggaggcgatgat 273
            |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 1824 cggggcgcggtgccacgcggtggagatcgaggccaagatccttgggctggaggccatgat 1883

                                         
Query: 274  ccgcgtgcagtgccacaagcgcaaccacc 302
            ||||||||||||||||||||| |||||||
Sbjct: 1884 ccgcgtgcagtgccacaagcggaaccacc 1912
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  210 bits (106), Expect = 2e-51
 Identities = 173/194 (89%), Gaps = 1/194 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        agcggttctacgcgctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcac 60
                |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 22338911 agcgcttctacgcgctgcgcgccgtggtgcccaacgtgtccaagatggacaaggcgtcgc 22338970

                                                                            
Query: 61       tgctgggcgacgccatctcctacatcaacgagct-cgcggtaagatgacggcgctggagt 119
                |||||||||||||||||||||||||||||||||| || || ||| | |||||||||||| 
Sbjct: 22338971 tgctgggcgacgccatctcctacatcaacgagctccgggggaagctcacggcgctggaga 22339030

                                                                            
Query: 120      cggacaaggagacgctccactcccaaattgaggcgctgaagaaggagcgcgacgcccggc 179
                |||||||||||||||| || || || || ||| |||| ||||||||||| ||||| ||||
Sbjct: 22339031 cggacaaggagacgctgcagtcgcagatggagtcgctcaagaaggagcgggacgcgcggc 22339090

                              
Query: 180      cggccgcgccgtcg 193
                || | |||||||||
Sbjct: 22339091 cgccggcgccgtcg 22339104



 Score =  153 bits (77), Expect = 4e-34
 Identities = 86/89 (96%)
 Strand = Plus / Plus

                                                                            
Query: 214      cggggcgcggtgccacgcggtggagatcgaggccaagatcctggggctggaggcgatgat 273
                |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 22339122 cggggcgcggtgccacgcggtggagatcgaggccaagatccttgggctggaggccatgat 22339181

                                             
Query: 274      ccgcgtgcagtgccacaagcgcaaccacc 302
                ||||||||||||||||||||| |||||||
Sbjct: 22339182 ccgcgtgcagtgccacaagcggaaccacc 22339210
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>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete
              sequence
          Length = 172427

 Score =  210 bits (106), Expect = 2e-51
 Identities = 173/194 (89%), Gaps = 1/194 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      agcggttctacgcgctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcac 60
              |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 156154 agcgcttctacgcgctgcgcgccgtggtgcccaacgtgtccaagatggacaaggcgtcgc 156213

                                                                          
Query: 61     tgctgggcgacgccatctcctacatcaacgagct-cgcggtaagatgacggcgctggagt 119
              |||||||||||||||||||||||||||||||||| || || ||| | |||||||||||| 
Sbjct: 156214 tgctgggcgacgccatctcctacatcaacgagctccgggggaagctcacggcgctggaga 156273

                                                                          
Query: 120    cggacaaggagacgctccactcccaaattgaggcgctgaagaaggagcgcgacgcccggc 179
              |||||||||||||||| || || || || ||| |||| ||||||||||| ||||| ||||
Sbjct: 156274 cggacaaggagacgctgcagtcgcagatggagtcgctcaagaaggagcgggacgcgcggc 156333

                            
Query: 180    cggccgcgccgtcg 193
              || | |||||||||
Sbjct: 156334 cgccggcgccgtcg 156347



 Score =  153 bits (77), Expect = 4e-34
 Identities = 86/89 (96%)
 Strand = Plus / Plus

                                                                          
Query: 214    cggggcgcggtgccacgcggtggagatcgaggccaagatcctggggctggaggcgatgat 273
              |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 156365 cggggcgcggtgccacgcggtggagatcgaggccaagatccttgggctggaggccatgat 156424

                                           
Query: 274    ccgcgtgcagtgccacaagcgcaaccacc 302
              ||||||||||||||||||||| |||||||
Sbjct: 156425 ccgcgtgcagtgccacaagcggaaccacc 156453
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  210 bits (106), Expect = 2e-51
 Identities = 173/194 (89%), Gaps = 1/194 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        agcggttctacgcgctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcac 60
                |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 22350979 agcgcttctacgcgctgcgcgccgtggtgcccaacgtgtccaagatggacaaggcgtcgc 22351038

                                                                            
Query: 61       tgctgggcgacgccatctcctacatcaacgagct-cgcggtaagatgacggcgctggagt 119
                |||||||||||||||||||||||||||||||||| || || ||| | |||||||||||| 
Sbjct: 22351039 tgctgggcgacgccatctcctacatcaacgagctccgggggaagctcacggcgctggaga 22351098

                                                                            
Query: 120      cggacaaggagacgctccactcccaaattgaggcgctgaagaaggagcgcgacgcccggc 179
                |||||||||||||||| || || || || ||| |||| ||||||||||| ||||| ||||
Sbjct: 22351099 cggacaaggagacgctgcagtcgcagatggagtcgctcaagaaggagcgggacgcgcggc 22351158

                              
Query: 180      cggccgcgccgtcg 193
                || | |||||||||
Sbjct: 22351159 cgccggcgccgtcg 22351172



 Score =  153 bits (77), Expect = 4e-34
 Identities = 86/89 (96%)
 Strand = Plus / Plus

                                                                            
Query: 214      cggggcgcggtgccacgcggtggagatcgaggccaagatcctggggctggaggcgatgat 273
                |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 22351190 cggggcgcggtgccacgcggtggagatcgaggccaagatccttgggctggaggccatgat 22351249

                                             
Query: 274      ccgcgtgcagtgccacaagcgcaaccacc 302
                ||||||||||||||||||||| |||||||
Sbjct: 22351250 ccgcgtgcagtgccacaagcggaaccacc 22351278
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>gb|AF061107.1|AF061107 Zea mays transcription factor MYC7E mRNA, partial cds
          Length = 2503

 Score =  186 bits (94), Expect = 3e-44
 Identities = 161/182 (88%), Gaps = 1/182 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    agcggttctacgcgctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcac 60
            |||| ||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 1613 agcgcttctacgcgctgcgcgccgtggtgcccaacgtgtcgaagatggacaaggcgtcgc 1672

                                                                        
Query: 61   tgctgggcgacgccatctcctacatcaacgagct-cgcggtaagatgacggcgctggagt 119
            |||| ||||||||||||||||||||||||||||| || || ||| ||||| |||||||| 
Sbjct: 1673 tgctcggcgacgccatctcctacatcaacgagctccggggcaagctgacgtcgctggaga 1732

                                                                        
Query: 120  cggacaaggagacgctccactcccaaattgaggcgctgaagaaggagcgcgacgcccggc 179
            | |||||||||||||| ||  ||||  | |||||||| ||||||||||||||||| ||||
Sbjct: 1733 ccgacaaggagacgctgcagacccaggtggaggcgctcaagaaggagcgcgacgcgcggc 1792

              
Query: 180  cg 181
            ||
Sbjct: 1793 cg 1794



 Score =  147 bits (74), Expect = 2e-32
 Identities = 92/98 (93%)
 Strand = Plus / Plus

                                                                        
Query: 205  gcacgacaacggggcgcggtgccacgcggtggagatcgaggccaagatcctggggctgga 264
            |||||||  |||| |||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1821 gcacgacggcgggccgcgctgccacgcggtggagatcgacgccaagatcctggggctgga 1880

                                                  
Query: 265  ggcgatgatccgcgtgcagtgccacaagcgcaaccacc 302
            ||| ||||||||||||||||||||||||||||||||||
Sbjct: 1881 ggccatgatccgcgtgcagtgccacaagcgcaaccacc 1918
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>gb|AY109646.1| Zea mays CL1599_-1 mRNA sequence
          Length = 2436

 Score =  159 bits (80), Expect = 6e-36
 Identities = 123/136 (90%), Gaps = 1/136 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    agcggttctacgcgctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcac 60
            |||| ||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 1613 agcgcttctacgcgctgcgcgccgtggtgcccaacgtgtcgaagatggacaaggcgtcgc 1672

                                                                        
Query: 61   tgctgggcgacgccatctcctacatcaacgagct-cgcggtaagatgacggcgctggagt 119
            |||| ||||||||||||||||||||||||||||| || || ||| ||||| |||||||| 
Sbjct: 1673 tgctcggcgacgccatctcctacatcaacgagctccggggcaagctgacgtcgctggaga 1732

                            
Query: 120  cggacaaggagacgct 135
            | ||||||||||||||
Sbjct: 1733 ccgacaaggagacgct 1748



 Score =  139 bits (70), Expect = 6e-30
 Identities = 76/78 (97%)
 Strand = Plus / Plus

                                                                        
Query: 225  gccacgcggtggagatcgaggccaagatcctggggctggaggcgatgatccgcgtgcagt 284
            ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1841 gccacgcggtggagatcgacgccaagatcctggggctggaggccatgatccgcgtgcagt 1900

                              
Query: 285  gccacaagcgcaaccacc 302
            ||||||||||||||||||
Sbjct: 1901 gccacaagcgcaaccacc 1918
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>gb|U18349.1|PVU18349 Phaseolus vulgaris phaseolin G-box binding protein PG2 (PG2) mRNA,
            partial cds
          Length = 2219

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                        
Query: 4    ggttctacgcgctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcactgc 63
            ||||||||||||| || || ||||| ||||||||||||||||||||||| || || || |
Sbjct: 1348 ggttctacgcgcttcgtgctgtggttcccaacgtgtccaagatggacaaagcgtcgcttc 1407

                                    
Query: 64   tgggcgacgccatctcctacatca 87
            |||| |||||||| || |||||||
Sbjct: 1408 tgggtgacgccatatcttacatca 1431
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>ref|NM_191645.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2058

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                        
Query: 4    ggttctacgcgctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcactgc 63
            ||||||||||||| ||||| |||||||||||  | ||||||||||||||||| || ||||
Sbjct: 1025 ggttctacgcgctgcgcgcggtggtgcccaagatctccaagatggacaaggcgtccctgc 1084

                                   
Query: 64   tgggcgacgccatctcctacatc 86
            |  ||||||||||| | ||||||
Sbjct: 1085 tcagcgacgccatcgcgtacatc 1107
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                            
Query: 4        ggttctacgcgctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcactgc 63
                ||||||||||||| ||||| |||||||||||  | ||||||||||||||||| || ||||
Sbjct: 29265738 ggttctacgcgctgcgcgcggtggtgcccaagatctccaagatggacaaggcgtccctgc 29265797

                                       
Query: 64       tgggcgacgccatctcctacatc 86
                |  ||||||||||| | ||||||
Sbjct: 29265798 tcagcgacgccatcgcgtacatc 29265820
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>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0692C11
          Length = 169562

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                         
Query: 4     ggttctacgcgctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcactgc 63
             ||||||||||||| ||||| |||||||||||  | ||||||||||||||||| || ||||
Sbjct: 44601 ggttctacgcgctgcgcgcggtggtgcccaagatctccaagatggacaaggcgtccctgc 44660

                                    
Query: 64    tgggcgacgccatctcctacatc 86
             |  ||||||||||| | ||||||
Sbjct: 44661 tcagcgacgccatcgcgtacatc 44683
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>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0684B02
          Length = 132470

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                          
Query: 4      ggttctacgcgctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcactgc 63
              ||||||||||||| ||||| |||||||||||  | ||||||||||||||||| || ||||
Sbjct: 111525 ggttctacgcgctgcgcgcggtggtgcccaagatctccaagatggacaaggcgtccctgc 111584

                                     
Query: 64     tgggcgacgccatctcctacatc 86
              |  ||||||||||| | ||||||
Sbjct: 111585 tcagcgacgccatcgcgtacatc 111607
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>dbj|AK064946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P16, full
            insert sequence
          Length = 1980

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                        
Query: 4    ggttctacgcgctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcactgc 63
            ||||||||||||| ||||| |||||||||||  | ||||||||||||||||| || ||||
Sbjct: 1286 ggttctacgcgctgcgcgcggtggtgcccaagatctccaagatggacaaggcgtccctgc 1345

                                   
Query: 64   tgggcgacgccatctcctacatc 86
            |  ||||||||||| | ||||||
Sbjct: 1346 tcagcgacgccatcgcgtacatc 1368
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>gb|U18348.1|PVU18348 Phaseolus vulgaris phaseolin G-box binding protein PG1 (PG1) mRNA,
            complete cds
          Length = 2359

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                        
Query: 3    cggttctacgcgctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcactg 62
            |||||||||||||| || || ||||| ||||||||||| ||||||||||| || || || 
Sbjct: 1621 cggttctacgcgcttcgtgcggtggttcccaacgtgtcgaagatggacaaagcatcgctc 1680

                                            
Query: 63   ctgggcgacgccatctcctacatcaacgagct 94
             | ||||| ||||| |||||||| ||||||||
Sbjct: 1681 ttaggcgatgccatatcctacataaacgagct 1712
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                            
Query: 24       gtggtgcccaacgtgtccaagatggacaaggcctcactgctgggcgacgccatctcctac 83
                |||||||||||| ||| ||||||||||||||| ||  |||| || |||||||| ||||| 
Sbjct: 22325281 gtggtgcccaacatgttcaagatggacaaggcgtcgttgctcggtgacgccatttcctaa 22325222

                           
Query: 84       atcaacgagct 94
                |||||| ||||
Sbjct: 22325221 atcaacaagct 22325211
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>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
             complete sequence
          Length = 147214

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                         
Query: 24    gtggtgcccaacgtgtccaagatggacaaggcctcactgctgggcgacgccatctcctac 83
             |||||||||||| ||| ||||||||||||||| ||  |||| || |||||||| ||||| 
Sbjct: 76185 gtggtgcccaacatgttcaagatggacaaggcgtcgttgctcggtgacgccatttcctaa 76126

                        
Query: 84    atcaacgagct 94
             |||||| ||||
Sbjct: 76125 atcaacaagct 76115
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 149    gaggcgctgaagaaggagcgcgacgcc 175
              |||||||||||||||||| ||||||||
Sbjct: 665288 gaggcgctgaagaaggagagcgacgcc 665314
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 149     gaggcgctgaagaaggagcgcgacgcc 175
               |||||||||||||||||| ||||||||
Sbjct: 4832447 gaggcgctgaagaaggagagcgacgcc 4832421
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>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 179   ccggccgcgccgtcgtcgtcgg 200
             ||||||||||||||||||||||
Sbjct: 74573 ccggccgcgccgtcgtcgtcgg 74552
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 101     aagatgacggcgctggagtcgg 122
               ||||||||||||||||||||||
Sbjct: 2370651 aagatgacggcgctggagtcgg 2370672
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>gb|AY625684.1| Triticum aestivum bHLH transcription factor (bHLH94) mRNA, partial
           cds
          Length = 878

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 21  gccgtggtgcccaacgtgtccaagatggacaaggcctcactgctgggcga 70
           ||||| ||||||||| | || || ||||||||||| || |||||||||||
Sbjct: 570 gccgttgtgcccaacatctcgaaaatggacaaggcttccctgctgggcga 619
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>ref|XM_471697.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 933

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 7   tctacgcgctccgcgccgtggtgcccaacgtgtccaagatggacaaggc 55
           ||||||||||||||   || ||||||||| |  ||||||||||||||||
Sbjct: 326 tctacgcgctccgcagtgtcgtgcccaacatcaccaagatggacaaggc 374
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 176     cggccggccgcgccgtcgtcg 196
               |||||||||||||||||||||
Sbjct: 5283400 cggccggccgcgccgtcgtcg 5283420
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 66/81 (81%)
 Strand = Plus / Minus

                                                                            
Query: 15       ctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcactgctgggcgacgcc 74
                |||||||||| |||||| | |||||||   |||||||||||||| || || | |||||||
Sbjct: 19974264 ctccgcgccgcggtgcctaccgtgtcccgcatggacaaggcctccctcctcgccgacgcc 19974205

                                     
Query: 75       atctcctacatcaacgagctc 95
                  | ||||||||  |||||||
Sbjct: 19974204 gccgcctacatcgccgagctc 19974184



 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 175      ccggccggccgcgccgtcgtcgtcg 199
                |||||| ||||||||||||||||||
Sbjct: 18547059 ccggcccgccgcgccgtcgtcgtcg 18547035
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 177     ggccggccgcgccgtcgtcgtcggg 201
               |||||||||||||||||||| ||||
Sbjct: 8103518 ggccggccgcgccgtcgtcggcggg 8103494
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>dbj|AB040744.1| Oryza sativa RERJ1 mRNA for Transcription Factor, complete cds
          Length = 1353

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 7   tctacgcgctccgcgccgtggtgcccaacgtgtccaagatggacaaggc 55
           ||||||||||||||   || ||||||||| |  ||||||||||||||||
Sbjct: 391 tctacgcgctccgcagtgtcgtgcccaacatcaccaagatggacaaggc 439
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>dbj|AP007254.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
             fosmid clone:OSJNOa211K08
          Length = 41043

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 66/81 (81%)
 Strand = Plus / Minus

                                                                         
Query: 15    ctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcactgctgggcgacgcc 74
             |||||||||| |||||| | |||||||   |||||||||||||| || || | |||||||
Sbjct: 30903 ctccgcgccgcggtgcctaccgtgtcccgcatggacaaggcctccctcctcgccgacgcc 30844

                                  
Query: 75    atctcctacatcaacgagctc 95
               | ||||||||  |||||||
Sbjct: 30843 gccgcctacatcgccgagctc 30823
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 178     gccggccgcgccgtcgtcgtc 198
               |||||||||||||||||||||
Sbjct: 1346193 gccggccgcgccgtcgtcgtc 1346213
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>dbj|AP006525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0498F03
          Length = 54025

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 66/81 (81%)
 Strand = Plus / Minus

                                                                         
Query: 15    ctccgcgccgtggtgcccaacgtgtccaagatggacaaggcctcactgctgggcgacgcc 74
             |||||||||| |||||| | |||||||   |||||||||||||| || || | |||||||
Sbjct: 48412 ctccgcgccgcggtgcctaccgtgtcccgcatggacaaggcctccctcctcgccgacgcc 48353

                                  
Query: 75    atctcctacatcaacgagctc 95
               | ||||||||  |||||||
Sbjct: 48352 gccgcctacatcgccgagctc 48332
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>dbj|AK105756.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D02, full
           insert sequence
          Length = 1959

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 175 ccggccggccgcgccgtcgtcgtcg 199
           |||||| ||||||||||||||||||
Sbjct: 194 ccggcccgccgcgccgtcgtcgtcg 170
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>dbj|AK067836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123J03, full
           insert sequence
          Length = 1969

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 175 ccggccggccgcgccgtcgtcgtcg 199
           |||||| ||||||||||||||||||
Sbjct: 192 ccggcccgccgcgccgtcgtcgtcg 168
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 149     gaggcgctgaagaaggagcgcgacg 173
               |||||||||||||||| ||||||||
Sbjct: 1807140 gaggcgctgaagaaggcgcgcgacg 1807116
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>ref|NM_117738.2| Arabidopsis thaliana DNA binding / transcription factor AT4G16430
            mRNA, complete cds
          Length = 1798

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 24   gtggtgcccaacgtgtccaagatggacaaggc 55
            |||||||| ||| | |||||||||||||||||
Sbjct: 1242 gtggtgcctaacatctccaagatggacaaggc 1273
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>ref|XM_469308.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1608

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 180 cggccgcgccgtcgtcgtcg 199
           ||||||||||||||||||||
Sbjct: 86  cggccgcgccgtcgtcgtcg 105
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 180      cggccgcgccgtcgtcgtcg 199
                ||||||||||||||||||||
Sbjct: 26839105 cggccgcgccgtcgtcgtcg 26839086
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>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete
             sequence
          Length = 149303

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   cggccgcgccgtcgtcgtcg 199
             ||||||||||||||||||||
Sbjct: 18105 cggccgcgccgtcgtcgtcg 18086
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>emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 6
          Length = 213788

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 24    gtggtgcccaacgtgtccaagatggacaaggc 55
             |||||||| ||| | |||||||||||||||||
Sbjct: 33124 gtggtgcctaacatctccaagatggacaaggc 33155
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>gb|AC153144.4| Mus musculus BAC clone RP23-220J15 from chromosome 13, complete sequence
          Length = 178032

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     gacaaggcctcactgctggg 67
              ||||||||||||||||||||
Sbjct: 105359 gacaaggcctcactgctggg 105378
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>emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 44
          Length = 198735

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 24    gtggtgcccaacgtgtccaagatggacaaggc 55
             |||||||| ||| | |||||||||||||||||
Sbjct: 11052 gtggtgcctaacatctccaagatggacaaggc 11083
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>gb|DQ098104.1| Rhodococcus aetherivorans strain I24 putative benzaldehyde
           dehydrogenase gene, complete cds
          Length = 1461

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 cccggccggccgcgccgtcg 193
           ||||||||||||||||||||
Sbjct: 696 cccggccggccgcgccgtcg 715
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>dbj|AB223617.1| Aspergillus oryzae cDNA, contig sequence: AoEST0455
          Length = 693

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 gcgctgaagaaggagcgcga 171
           ||||||||||||||||||||
Sbjct: 546 gcgctgaagaaggagcgcga 565
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 179     ccggccgcgccgtcgtcgtc 198
               ||||||||||||||||||||
Sbjct: 2555670 ccggccgcgccgtcgtcgtc 2555689
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 152     gcgctgaagaaggagcgcga 171
               ||||||||||||||||||||
Sbjct: 3646562 gcgctgaagaaggagcgcga 3646581
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>gb|AF251688.1|AF251688 Arabidopsis thaliana putative transcription factor BHLH3 (BHLH3)
            mRNA, complete cds
          Length = 1404

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 24   gtggtgcccaacgtgtccaagatggacaaggc 55
            |||||||| ||| | |||||||||||||||||
Sbjct: 1024 gtggtgcctaacatctccaagatggacaaggc 1055
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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 235     ggagatcgaggccaagatcctggg 258
               ||||||||||| ||||||||||||
Sbjct: 1374652 ggagatcgaggtcaagatcctggg 1374629
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>gb|AY057626.1| Arabidopsis thaliana AT4g16430/dl4240w mRNA, complete cds
          Length = 1792

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 24   gtggtgcccaacgtgtccaagatggacaaggc 55
            |||||||| ||| | |||||||||||||||||
Sbjct: 1242 gtggtgcctaacatctccaagatggacaaggc 1273
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>gb|AF428368.1|AF428368 Arabidopsis thaliana AT4g16430/dl4240w mRNA, complete cds
          Length = 1788

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 24   gtggtgcccaacgtgtccaagatggacaaggc 55
            |||||||| ||| | |||||||||||||||||
Sbjct: 1236 gtggtgcctaacatctccaagatggacaaggc 1267
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>gb|BC028266.1| Mus musculus zinc finger, MYND domain containing 11, mRNA (cDNA clone
            IMAGE:5366007), with apparent retained intron
          Length = 4377

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 48   gacaaggcctcactgctggg 67
            ||||||||||||||||||||
Sbjct: 1999 gacaaggcctcactgctggg 1980
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 180      cggccgcgccgtcgtcgtcg 199
                ||||||||||||||||||||
Sbjct: 26930428 cggccgcgccgtcgtcgtcg 26930409
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>gb|AC016910.6| Homo sapiens BAC clone RP11-460B1 from 2, complete sequence
          Length = 163570

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     caaggcctcactgctgggcg 69
              ||||||||||||||||||||
Sbjct: 131258 caaggcctcactgctgggcg 131239
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>gb|BT002301.1| Arabidopsis thaliana At4g16430/dl4240w mRNA, complete cds
          Length = 1404

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 24   gtggtgcccaacgtgtccaagatggacaaggc 55
            |||||||| ||| | |||||||||||||||||
Sbjct: 1024 gtggtgcctaacatctccaagatggacaaggc 1055
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    ggccgcgccgtcgtcgtcgg 200
              ||||||||||||||||||||
Sbjct: 293703 ggccgcgccgtcgtcgtcgg 293684
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>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940123D9, complete sequence
          Length = 121336

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   gccggccgcgccgtcgtcgt 197
             ||||||||||||||||||||
Sbjct: 70774 gccggccgcgccgtcgtcgt 70793


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,900,623
Number of Sequences: 3902068
Number of extensions: 1900623
Number of successful extensions: 50801
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49483
Number of HSP's gapped (non-prelim): 1311
length of query: 302
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 280
effective length of database: 17,147,199,772
effective search space: 4801215936160
effective search space used: 4801215936160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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