ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet75d09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB252145.1| Triticum aestivum Tamyb2 mRNA for myb-related protein, complete cds Length = 1010 Score = 218 bits (110), Expect = 8e-54 Identities = 140/150 (93%) Strand = Plus / Plus Query: 151 aatgggacgtccgacgtctgggggcgcggagcagcccaagctccgcaaggggctgtggtc 210 ||||||||||||| |||| || |||| || |||||| ||||||||||||||||||||||| Sbjct: 104 aatgggacgtccgtcgtccggcggcgtggggcagccgaagctccgcaaggggctgtggtc 163 Query: 211 gcccgaggaagacgagaggctctacaaccacatcatccggcacggcgtcggctgctggac 270 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 gcccgaggaagacgagaagctctacaaccacatcatccggcacggcgtcggctgctggag 223 Query: 271 ctccgtccccaggctcgccgggctgcaccg 300 ||| ||||||||||||||||||||| |||| Sbjct: 224 ctcagtccccaggctcgccgggctgaaccg 253
>emb|X70881.1|HVMYB3G H.vulgare myb3 gene Length = 3241 Score = 186 bits (94), Expect = 3e-44 Identities = 136/150 (90%) Strand = Plus / Plus Query: 151 aatgggacgtccgacgtctgggggcgcggagcagcccaagctccgcaaggggctgtggtc 210 ||||||||| ||| |||| || | || || |||||||||| ||||||||||||||||||| Sbjct: 1064 aatgggacgcccgtcgtccggcgccgtggggcagcccaaggtccgcaaggggctgtggtc 1123 Query: 211 gcccgaggaagacgagaggctctacaaccacatcatccggcacggcgtcggctgctggac 270 ||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1124 gcccgaggaggacgagaagctctacaaccacatcatccgtcacggcgtcggctgctggag 1183 Query: 271 ctccgtccccaggctcgccgggctgcaccg 300 |||||||||||||||||||| |||| |||| Sbjct: 1184 ctccgtccccaggctcgccgcgctgaaccg 1213
>emb|X70878.1|HVMYB3 H.vulgare myb3 mRNA Length = 1270 Score = 186 bits (94), Expect = 3e-44 Identities = 136/150 (90%) Strand = Plus / Plus Query: 151 aatgggacgtccgacgtctgggggcgcggagcagcccaagctccgcaaggggctgtggtc 210 ||||||||| ||| |||| || | || || |||||||||| ||||||||||||||||||| Sbjct: 64 aatgggacgcccgtcgtccggcgccgtggggcagcccaaggtccgcaaggggctgtggtc 123 Query: 211 gcccgaggaagacgagaggctctacaaccacatcatccggcacggcgtcggctgctggac 270 ||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 124 gcccgaggaggacgagaagctctacaaccacatcatccgtcacggcgtcggctgctggag 183 Query: 271 ctccgtccccaggctcgccgggctgcaccg 300 |||||||||||||||||||| |||| |||| Sbjct: 184 ctccgtccccaggctcgccgcgctgaaccg 213
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 103 bits (52), Expect = 3e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 197 aaggggctgtggtcgcccgaggaagacgagaggctctacaaccacatcatccggcacggc 256 |||||||| ||||| |||||||||||||| | ||| ||||| ||||||||||| || ||| Sbjct: 62818 aaggggctttggtctcccgaggaagacgataagctgtacaatcacatcatccgacatggc 62877 Query: 257 gtcggctgctggacctccgtccccaggctcgc 288 ||||||||||||| ||||||||||| |||||| Sbjct: 62878 gtcggctgctggagctccgtccccaagctcgc 62909
>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08, complete sequence Length = 115026 Score = 103 bits (52), Expect = 3e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 197 aaggggctgtggtcgcccgaggaagacgagaggctctacaaccacatcatccggcacggc 256 |||||||| ||||| |||||||||||||| | ||| ||||| ||||||||||| || ||| Sbjct: 19119 aaggggctttggtctcccgaggaagacgataagctgtacaatcacatcatccgacatggc 19178 Query: 257 gtcggctgctggacctccgtccccaggctcgc 288 ||||||||||||| ||||||||||| |||||| Sbjct: 19179 gtcggctgctggagctccgtccccaagctcgc 19210
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 103 bits (52), Expect = 3e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 197 aaggggctgtggtcgcccgaggaagacgagaggctctacaaccacatcatccggcacggc 256 |||||||| ||||| |||||||||||||| | ||| ||||| ||||||||||| || ||| Sbjct: 26780879 aaggggctttggtctcccgaggaagacgataagctgtacaatcacatcatccgacatggc 26780938 Query: 257 gtcggctgctggacctccgtccccaggctcgc 288 ||||||||||||| ||||||||||| |||||| Sbjct: 26780939 gtcggctgctggagctccgtccccaagctcgc 26780970
>gb|AF111710.1|AF111710 Oryza sativa subsp. indica putative dnaJ-like protein, putative myb-related protein, putative farnesyl pyrophosphate synthase, and hypothetical protein genes, complete cds Length = 43422 Score = 103 bits (52), Expect = 3e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 197 aaggggctgtggtcgcccgaggaagacgagaggctctacaaccacatcatccggcacggc 256 |||||||| ||||| |||||||||||||| | ||| ||||| ||||||||||| || ||| Sbjct: 13208 aaggggctttggtctcccgaggaagacgataagctgtacaatcacatcatccgacatggc 13149 Query: 257 gtcggctgctggacctccgtccccaggctcgc 288 ||||||||||||| ||||||||||| |||||| Sbjct: 13148 gtcggctgctggagctccgtccccaagctcgc 13117
>dbj|AK111782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084H22, full insert sequence Length = 1514 Score = 101 bits (51), Expect = 1e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 188 aagctccgcaaggggctgtggtcgcccgaggaagacgagaggctctacaaccacatcatc 247 ||||| ||||||||||| ||||| |||||||||||||||| ||||||||| |||||| | Sbjct: 320 aagctgcgcaaggggctctggtctcccgaggaagacgagaagctctacaatcacatctac 379 Query: 248 cggcacggcgtcggctgctggacctccgtccccaggctcgccgggct 294 || |||||||||| ||||||| |||||| |||| |||||| ||||| Sbjct: 380 cgctacggcgtcggttgctggagctccgttcccaagctcgcagggct 426
>ref|NM_192221.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 909 Score = 97.6 bits (49), Expect = 2e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 188 aagctccgcaaggggctgtggtcgcccgaggaagacgagaggctctacaaccacatcatc 247 ||||| ||||||||||| ||||| |||||||||||||||| ||||||||| |||||| | Sbjct: 40 aagctgcgcaaggggctctggtctcccgaggaagacgagaagctctacaatcacatctac 99 Query: 248 cggcacggcgtcggctgctggacctccgtccccaggctcgc 288 || |||||||||| ||||||| |||||| |||| |||||| Sbjct: 100 cgctacggcgtcggttgctggagctccgttcccaagctcgc 140
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 97.6 bits (49), Expect = 2e-17 Identities = 88/101 (87%) Strand = Plus / Minus Query: 188 aagctccgcaaggggctgtggtcgcccgaggaagacgagaggctctacaaccacatcatc 247 ||||| ||||||||||| ||||| |||||||||||||||| ||||||||| |||||| | Sbjct: 29126848 aagctgcgcaaggggctctggtctcccgaggaagacgagaagctctacaatcacatctac 29126789 Query: 248 cggcacggcgtcggctgctggacctccgtccccaggctcgc 288 || |||||||||| ||||||| |||||| |||| |||||| Sbjct: 29126788 cgctacggcgtcggttgctggagctccgttcccaagctcgc 29126748 Score = 89.7 bits (45), Expect = 5e-15 Identities = 81/93 (87%) Strand = Plus / Minus Query: 199 ggggctgtggtcgcccgaggaagacgagaggctctacaaccacatcatccggcacggcgt 258 ||||||||||||||| ||||| ||||||| ||| | ||||||||||| ||| | ||||| Sbjct: 20238770 ggggctgtggtcgccggaggaggacgagaagctgttcaaccacatcagccgctatggcgt 20238711 Query: 259 cggctgctggacctccgtccccaggctcgccgg 291 ||||||||||| ||||||||| | ||||||||| Sbjct: 20238710 cggctgctggagctccgtcccaaagctcgccgg 20238678 Score = 65.9 bits (33), Expect = 7e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 197 aaggggctgtggtcgcccgaggaagacgagaggctctacaaccacatca 245 ||||||||||||||||| ||||| |||||| ||||||||| |||||||| Sbjct: 3520892 aaggggctgtggtcgccggaggaggacgagcggctctacacccacatca 3520844 Score = 50.1 bits (25), Expect = 0.004 Identities = 73/89 (82%) Strand = Plus / Plus Query: 203 ctgtggtcgcccgaggaagacgagaggctctacaaccacatcatccggcacggcgtcggc 262 |||||||| || ||||||||||||| |||| ||| ||||| | ||||||| ||| Sbjct: 29462965 ctgtggtcaccagaggaagacgagaagctcgtcaagtacatctccacgcacggccatggc 29463024 Query: 263 tgctggacctccgtccccaggctcgccgg 291 ||||||| ||||||||||||||| ||||| Sbjct: 29463025 tgctggagctccgtccccaggctagccgg 29463053
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 97.6 bits (49), Expect = 2e-17 Identities = 88/101 (87%) Strand = Plus / Minus Query: 188 aagctccgcaaggggctgtggtcgcccgaggaagacgagaggctctacaaccacatcatc 247 ||||| ||||||||||| ||||| |||||||||||||||| ||||||||| |||||| | Sbjct: 87214 aagctgcgcaaggggctctggtctcccgaggaagacgagaagctctacaatcacatctac 87155 Query: 248 cggcacggcgtcggctgctggacctccgtccccaggctcgc 288 || |||||||||| ||||||| |||||| |||| |||||| Sbjct: 87154 cgctacggcgtcggttgctggagctccgttcccaagctcgc 87114
>ref|NM_193333.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 89.7 bits (45), Expect = 5e-15 Identities = 81/93 (87%) Strand = Plus / Plus Query: 199 ggggctgtggtcgcccgaggaagacgagaggctctacaaccacatcatccggcacggcgt 258 ||||||||||||||| ||||| ||||||| ||| | ||||||||||| ||| | ||||| Sbjct: 51 ggggctgtggtcgccggaggaggacgagaagctgttcaaccacatcagccgctatggcgt 110 Query: 259 cggctgctggacctccgtccccaggctcgccgg 291 ||||||||||| ||||||||| | ||||||||| Sbjct: 111 cggctgctggagctccgtcccaaagctcgccgg 143
>dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0051H17 Length = 187471 Score = 89.7 bits (45), Expect = 5e-15 Identities = 81/93 (87%) Strand = Plus / Minus Query: 199 ggggctgtggtcgcccgaggaagacgagaggctctacaaccacatcatccggcacggcgt 258 ||||||||||||||| ||||| ||||||| ||| | ||||||||||| ||| | ||||| Sbjct: 145148 ggggctgtggtcgccggaggaggacgagaagctgttcaaccacatcagccgctatggcgt 145089 Query: 259 cggctgctggacctccgtccccaggctcgccgg 291 ||||||||||| ||||||||| | ||||||||| Sbjct: 145088 cggctgctggagctccgtcccaaagctcgccgg 145056
>dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0026J14 Length = 163496 Score = 89.7 bits (45), Expect = 5e-15 Identities = 81/93 (87%) Strand = Plus / Minus Query: 199 ggggctgtggtcgcccgaggaagacgagaggctctacaaccacatcatccggcacggcgt 258 ||||||||||||||| ||||| ||||||| ||| | ||||||||||| ||| | ||||| Sbjct: 4803 ggggctgtggtcgccggaggaggacgagaagctgttcaaccacatcagccgctatggcgt 4744 Query: 259 cggctgctggacctccgtccccaggctcgccgg 291 ||||||||||| ||||||||| | ||||||||| Sbjct: 4743 cggctgctggagctccgtcccaaagctcgccgg 4711
>ref|XM_550262.1| Oryza sativa (japonica cultivar-group), mRNA Length = 873 Score = 65.9 bits (33), Expect = 7e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 197 aaggggctgtggtcgcccgaggaagacgagaggctctacaaccacatca 245 ||||||||||||||||| ||||| |||||| ||||||||| |||||||| Sbjct: 85 aaggggctgtggtcgccggaggaggacgagcggctctacacccacatca 133
>gb|AY459343.1| Oryza sativa (japonica cultivar-group) clone CL018501.1 R2R3-MYB gene region Length = 18906 Score = 65.9 bits (33), Expect = 7e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 197 aaggggctgtggtcgcccgaggaagacgagaggctctacaaccacatca 245 ||||||||||||||||| ||||| |||||| ||||||||| |||||||| Sbjct: 17214 aaggggctgtggtcgccggaggaggacgagcggctctacacccacatca 17262
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1276_B06 Length = 175174 Score = 65.9 bits (33), Expect = 7e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 197 aaggggctgtggtcgcccgaggaagacgagaggctctacaaccacatca 245 ||||||||||||||||| ||||| |||||| ||||||||| |||||||| Sbjct: 88960 aaggggctgtggtcgccggaggaggacgagcggctctacacccacatca 88912
>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028E10 Length = 140791 Score = 65.9 bits (33), Expect = 7e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 197 aaggggctgtggtcgcccgaggaagacgagaggctctacaaccacatca 245 ||||||||||||||||| ||||| |||||| ||||||||| |||||||| Sbjct: 107652 aaggggctgtggtcgccggaggaggacgagcggctctacacccacatca 107604
>gb|AF470063.1| Sorghum bicolor P-type R2R3 Myb protein (Myb5) gene, partial cds Length = 1117 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 188 aagctccgcaaggggctgtggtcgcccgaggaagacgagaggct 231 ||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 442 aagctgcgcaaggggctgtggtcgccggaggaggacgagaggct 485
>gb|AY672068.1| Hordeum vulgare subsp. vulgare myb transcription factor mRNA, complete cds Length = 1542 Score = 60.0 bits (30), Expect = 4e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 186 ccaagctccgcaaggggctgtggtcgcccgaggaagacgagaggct 231 ||||||| || ||||||||||||||||| ||||| ||||||||||| Sbjct: 174 ccaagctgcggaaggggctgtggtcgccggaggaggacgagaggct 219
>ref|NM_191687.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 924 Score = 54.0 bits (27), Expect = 3e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 203 ctgtggtcgcccgaggaagacgagaggctctacaaccacatcatccggcacggcgtcggc 262 |||||||| || ||||||||||||| |||| ||| ||||| | ||||||| ||| Sbjct: 46 ctgtggtcaccagaggaagacgagaagctcgtcaagtacatctccacgcacggccatggc 105 Query: 263 tgctggacctccgtccccaggctcgccgggctgca 297 ||||||| ||||||||||||||| |||||| |||| Sbjct: 106 tgctggagctccgtccccaggctagccgggttgca 140
>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456F08 Length = 156850 Score = 50.1 bits (25), Expect = 0.004 Identities = 73/89 (82%) Strand = Plus / Plus Query: 203 ctgtggtcgcccgaggaagacgagaggctctacaaccacatcatccggcacggcgtcggc 262 |||||||| || ||||||||||||| |||| ||| ||||| | ||||||| ||| Sbjct: 29239 ctgtggtcaccagaggaagacgagaagctcgtcaagtacatctccacgcacggccatggc 29298 Query: 263 tgctggacctccgtccccaggctcgccgg 291 ||||||| ||||||||||||||| ||||| Sbjct: 29299 tgctggagctccgtccccaggctagccgg 29327
>ref|NM_187376.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1203 Score = 48.1 bits (24), Expect = 0.016 Identities = 39/44 (88%) Strand = Plus / Plus Query: 261 gctgctggacctccgtccccaggctcgccgggctgcaccggtgc 304 ||||||||| ||||||||||| || ||||||| |||| |||||| Sbjct: 101 gctgctggagctccgtccccaagcacgccgggttgcagcggtgc 144
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.065 Identities = 29/31 (93%) Strand = Plus / Minus Query: 197 aaggggctgtggtcgcccgaggaagacgaga 227 ||||||||||||||||| ||||| ||||||| Sbjct: 20035076 aaggggctgtggtcgccggaggaggacgaga 20035046
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.065 Identities = 29/31 (93%) Strand = Plus / Minus Query: 197 aaggggctgtggtcgcccgaggaagacgaga 227 ||||||||||||||||| ||||| ||||||| Sbjct: 19961290 aaggggctgtggtcgccggaggaggacgaga 19961260
>emb|AL713900.4|CNS07YQ0 Oryza sativa chromosome 12, . BAC OJ1126_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 99791 Score = 46.1 bits (23), Expect = 0.065 Identities = 29/31 (93%) Strand = Plus / Minus Query: 197 aaggggctgtggtcgcccgaggaagacgaga 227 ||||||||||||||||| ||||| ||||||| Sbjct: 15238 aaggggctgtggtcgccggaggaggacgaga 15208
>ref|XM_470673.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1098 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Plus Query: 199 ggggctgtggtcgcccgaggaagacgagaggctc 232 ||||||||||||||| ||||| ||||||| |||| Sbjct: 42 ggggctgtggtcgccggaggaggacgagaagctc 75
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Minus Query: 199 ggggctgtggtcgcccgaggaagacgagaggctc 232 ||||||||||||||| ||||| ||||||| |||| Sbjct: 14437715 ggggctgtggtcgccggaggaggacgagaagctc 14437682
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Minus Query: 199 ggggctgtggtcgcccgaggaagacgagaggctc 232 ||||||||||||||| ||||| ||||||| |||| Sbjct: 14432690 ggggctgtggtcgccggaggaggacgagaagctc 14432657
>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete sequence Length = 135594 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Plus Query: 199 ggggctgtggtcgcccgaggaagacgagaggctc 232 ||||||||||||||| ||||| ||||||| |||| Sbjct: 103666 ggggctgtggtcgccggaggaggacgagaagctc 103699
>ref|XM_473295.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 897 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 tccccaggctcgccgggctgcaccggtgc 304 |||||| ||||||||||||| |||||||| Sbjct: 119 tccccaagctcgccgggctgaaccggtgc 147
>gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold Length = 574594 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 ccgacgtctgggggcgcggagcagc 185 ||||||||||||||||||| ||||| Sbjct: 547784 ccgacgtctgggggcgcggcgcagc 547808
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 200 gggctgtggtcgcccgaggaagacgagaggctc 232 |||||||||||||| ||||| ||||||| |||| Sbjct: 18606699 gggctgtggtcgccggaggaggacgagaagctc 18606667 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 200 gggctgtggtcgcccgaggaagacgaga 227 |||||||||||||| ||||| ||||||| Sbjct: 26302485 gggctgtggtcgccggaggaggacgaga 26302512
>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1197_D06 Length = 103844 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 200 gggctgtggtcgcccgaggaagacgagaggctc 232 |||||||||||||| ||||| ||||||| |||| Sbjct: 31753 gggctgtggtcgccggaggaggacgagaagctc 31721
>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0005E02 Length = 89380 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 200 gggctgtggtcgcccgaggaagacgagaggctc 232 |||||||||||||| ||||| ||||||| |||| Sbjct: 59241 gggctgtggtcgccggaggaggacgagaagctc 59209
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 264 gctggacctccgtccccaggctcgc 288 ||||||||||||||||| ||||||| Sbjct: 1891681 gctggacctccgtcccctggctcgc 1891705
>ref|XM_482497.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 40.1 bits (20), Expect = 4.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 273 ccgtccccaggctcgccgggctgcaccggtgc 304 ||||||||| |||||||||||| | ||||||| Sbjct: 116 ccgtccccaagctcgccgggcttctccggtgc 147
>ref|NM_193128.1| Oryza sativa (japonica cultivar-group), mRNA Length = 525 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 200 gggctgtggtcgcccgaggaagacgaga 227 |||||||||||||| ||||| ||||||| Sbjct: 43 gggctgtggtcgccggaggaggacgaga 70
>emb|AJ311051.1|OSA311051 Oryza sativa mRNA for Myb51 protein (myb51 gene) Length = 1187 Score = 40.1 bits (20), Expect = 4.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 273 ccgtccccaggctcgccgggctgcaccggtgc 304 ||||||||| |||||||||||| | ||||||| Sbjct: 275 ccgtccccaagctcgccgggcttctccggtgc 306
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 gcagcccaagctccgcaaggggct 204 |||||||||||| ||||||||||| Sbjct: 81846 gcagcccaagctgcgcaaggggct 81869
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455H11 Length = 101607 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 200 gggctgtggtcgcccgaggaagacgaga 227 |||||||||||||| ||||| ||||||| Sbjct: 77113 gggctgtggtcgccggaggaggacgaga 77140
>dbj|AP003752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1332_C12 Length = 67349 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 200 gggctgtggtcgcccgaggaagacgaga 227 |||||||||||||| ||||| ||||||| Sbjct: 22063 gggctgtggtcgccggaggaggacgaga 22090
>gb|AY108777.1| Zea mays PCO139596 mRNA sequence Length = 496 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 200 gggctgtggtcgcccgaggaagacgaga 227 |||||||||||||| ||||| ||||||| Sbjct: 85 gggctgtggtcgccggaggaggacgaga 112
>gb|AY104558.1| Zea mays PCO116495 mRNA sequence Length = 845 Score = 40.1 bits (20), Expect = 4.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 193 ccgcaaggggctgtggtcgcccgaggaagacgagaggctc 232 ||||||||| ||||||||||| ||||| ||| ||| |||| Sbjct: 32 ccgcaagggcctgtggtcgccggaggaggaccagaagctc 71 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,495,099 Number of Sequences: 3902068 Number of extensions: 1495099 Number of successful extensions: 24294 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 24004 Number of HSP's gapped (non-prelim): 290 length of query: 304 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 282 effective length of database: 17,147,199,772 effective search space: 4835510335704 effective search space used: 4835510335704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
