Clone Name	baet75a12
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N...	422	e-115
2	gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA...	422	e-115
3	gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1...	422	e-115
4	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	422	e-115
5	gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom...	422	e-115
6	emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	422	e-115
7	emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4,...	422	e-115
8	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	422	e-115
9	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	422	e-115
10	dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clon...	422	e-115
11	dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clon...	422	e-115
12	dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clon...	422	e-115
13	dbj|AK060344.1| Oryza sativa (japonica cultivar-group) cDNA clon...	422	e-115
14	dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome	422	e-115
15	gb|U49840.1|OSU49840 Oryza sativa subsp. indica large ribosomal ...	422	e-115
16	emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,...	414	e-113
17	gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome...	414	e-113
18	gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	414	e-113
19	gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	414	e-113
20	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	414	e-113
21	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	414	e-113
22	gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome	414	e-113
23	dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D...	414	e-113
24	dbj|AK108459.1| Oryza sativa (japonica cultivar-group) cDNA clon...	414	e-113
25	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	414	e-113
26	dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ...	414	e-113
27	dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome	414	e-113
28	dbj|AK059311.1| Oryza sativa (japonica cultivar-group) cDNA clon...	412	e-112
29	dbj|AK061169.1| Oryza sativa (japonica cultivar-group) cDNA clon...	408	e-111
30	dbj|AK059717.1| Oryza sativa (japonica cultivar-group) cDNA clon...	408	e-111
31	gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen...	400	e-109
32	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	398	e-108
33	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	398	e-108
34	emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa...	398	e-108
35	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	391	e-106
36	dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic D...	391	e-106
37	dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic D...	391	e-106
38	dbj|AK059370.1| Oryza sativa (japonica cultivar-group) cDNA clon...	389	e-105
39	emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	387	e-104
40	emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome	385	e-104
41	emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon	385	e-104
42	emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribo...	385	e-104
43	emb|AJ879453.1| Acorus calamus chloroplast, complete genome	377	e-101
44	gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, co...	373	e-100
45	gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene...	369	3e-99
46	gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ...	369	3e-99
47	emb|AJ970307.1| Cucumis sativus chloroplast complete genome	361	6e-97
48	gb|AY251296.1| Stellaria longipes 23S ribosomal RNA gene, partia...	361	6e-97
49	emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomi...	361	6e-97
50	emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast ...	361	6e-97
51	gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid...	361	6e-97
52	dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co...	361	6e-97
53	emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of p...	361	6e-97
54	emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA	353	2e-94
55	gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple...	353	2e-94
56	emb|AJ627251.1| Nymphaea alba chloroplast, complete genome	353	2e-94
57	emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet...	353	2e-94
58	gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c...	353	2e-94
59	gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence	353	2e-94
60	gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, compl...	353	2e-94
61	gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ...	353	2e-94
62	gb|AY582139.1| Panax ginseng chloroplast, complete genome	353	2e-94
63	emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome	353	2e-94
64	gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla...	353	2e-94
65	gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ...	353	2e-94
66	dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s...	353	2e-94
67	dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl...	353	2e-94
68	gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome	353	2e-94
69	gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complet...	351	6e-94
70	gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome...	345	4e-92
71	gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl...	345	4e-92
72	gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N...	345	4e-92
73	gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, comp...	345	4e-92
74	gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes	345	4e-92
75	gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA...	345	4e-92
76	emb|AJ005357.1|ATA005357 Aesculus turbinata microsatellite DNA, ...	341	6e-91
77	emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ...	339	2e-90
78	gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, comp...	337	9e-90
79	gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, comp...	337	9e-90
80	gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete se...	337	9e-90
81	dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome	337	9e-90
82	gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast...	331	6e-88
83	gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosom...	331	6e-88
84	gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, comple...	331	6e-88
85	gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5...	321	5e-85
86	gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rr...	321	5e-85
87	dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome	321	5e-85
88	gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA ...	313	1e-82
89	dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, comple...	313	1e-82
90	dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete ge...	313	1e-82
91	dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S rib...	313	1e-82
92	dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast ...	311	5e-82
93	gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome	305	3e-80
94	gb|AY660566.1| Huperzia lucidula chloroplast, complete genome	305	3e-80
95	dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	305	3e-80
96	emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single r...	303	1e-79
97	gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA	303	1e-79
98	emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloropl...	299	2e-78
99	gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, compl...	297	8e-78
100	gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete se...	291	5e-76
101	gb|AC093544.8| Medicago truncatula chloroplast, complete genome,...	291	5e-76
102	gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA ...	291	5e-76
103	gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-2...	281	5e-73
104	dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete ge...	276	3e-71
105	dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete g...	266	3e-68
106	emb|X69917.1|BCMIDDLYB B.corolliflora middly repeated DNA	238	6e-60
107	dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome	234	1e-58
108	gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl)...	228	6e-57
109	dbj|AK060185.1| Oryza sativa (japonica cultivar-group) cDNA clon...	226	2e-56
110	gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete ge...	222	4e-55
111	emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon...	222	4e-55
112	emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA	220	1e-54
113	gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete g...	218	6e-54
114	emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5...	212	4e-52
115	gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (...	212	4e-52
116	gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (...	212	4e-52
117	gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl)...	212	4e-52
118	gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subuni...	204	9e-50
119	gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete ...	204	9e-50
120	gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome	202	3e-49
121	emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ...	196	2e-47
122	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	188	5e-45
123	dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic D...	188	5e-45
124	gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (...	188	5e-45
125	gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal ...	186	2e-44
126	gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, comple...	186	2e-44
127	emb|X59768.1|CA23SRR C.americana 23S rRNA gene	184	8e-44
128	gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (r...	184	8e-44
129	gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal...	182	3e-43
130	gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl...	182	3e-43
131	gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (r...	182	3e-43
132	gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome	174	8e-41
133	gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal R...	170	1e-39
134	emb|X13526.1|CHNPLR Tobacco chloroplast 23S rDNA and lincomycin ...	168	5e-39
135	dbj|AK059158.1| Oryza sativa (japonica cultivar-group) cDNA clon...	161	1e-36
136	gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ri...	159	5e-36
137	gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (...	157	2e-35
138	gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RN...	157	2e-35
139	dbj|AK063570.1| Oryza sativa (japonica cultivar-group) cDNA clon...	157	2e-35
140	gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (...	155	7e-35
141	gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Me...	153	3e-34
142	gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subun...	153	3e-34
143	gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete g...	151	1e-33
144	gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subun...	151	1e-33
145	gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit riboso...	151	1e-33
146	gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosoma...	151	1e-33
147	gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit riboso...	151	1e-33
148	gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (...	151	1e-33
149	gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal R...	149	5e-33
150	gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribos...	143	3e-31
151	gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome	143	3e-31
152	gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-su...	141	1e-30
153	gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit riboso...	141	1e-30
154	emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene ...	141	1e-30
155	gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome	139	4e-30
156	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	139	4e-30
157	gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribo...	139	4e-30
158	gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subu...	137	2e-29
159	gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subu...	135	7e-29
160	gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subun...	135	7e-29
161	dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complet...	135	7e-29
162	dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome	135	7e-29
163	gb|AC074111.2| Arabidopsis thaliana chromosome 1 BAC T18N24 geno...	133	3e-28
164	gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast lar...	133	3e-28
165	gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ...	133	3e-28
166	gb|AC007505.4|AC007505 Arabidopsis thaliana chromosome I BAC F28...	133	3e-28
167	emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gen...	133	3e-28
168	gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome	133	3e-28
169	gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-s...	131	1e-27
170	emb|AJ864703.1| Fragaria vesca partial chloroplast 23S rRNA gene	129	4e-27
171	emb|AJ879830.1| Uncultured organism 23S rRNA gene, clone LP4-148	129	4e-27
172	emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA ge...	129	4e-27
173	gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ri...	127	2e-26
174	emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA ...	127	2e-26
175	gb|AY389864.1| Uncultured phototrophic eukaryote large subunit r...	125	7e-26
176	emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast part...	125	7e-26
177	emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast g...	125	7e-26
178	emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA...	125	7e-26
179	gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large s...	125	7e-26
180	gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribos...	125	7e-26
181	gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribo...	125	7e-26
182	gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosom...	125	7e-26
183	gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal R...	125	7e-26
184	emb|X68907.1|CHCFRRNL3 Chloroplast Chlamydomonas frankii rrnL ge...	125	7e-26
185	emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (...	125	7e-26
186	gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large ...	123	3e-25
187	gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large ...	123	3e-25
188	emb|X68892.1|CHCGRRNL2 Chloroplast Chlamydomonas geitleri rrnL g...	123	3e-25
189	gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA...	121	1e-24
190	gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, ...	119	4e-24
191	gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA g...	119	4e-24
192	gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene,...	119	4e-24
193	gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large sub...	119	4e-24
194	gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal ...	119	4e-24
195	gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rr...	119	4e-24
196	gb|AF041468.1| Guillardia theta complete plastid genome	119	4e-24
197	emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene...	119	4e-24
198	gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA...	117	2e-23
199	gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, co...	117	2e-23
200	gb|L42986.1|RTCCPRGOLA Carteria lunzensis	117	2e-23
201	gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-...	117	2e-23
202	gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloropla...	117	2e-23
203	gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large s...	117	2e-23
204	gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast lar...	117	2e-23
205	gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit rib...	117	2e-23
206	tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloropl...	117	2e-23
207	gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplas...	117	2e-23
208	dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete...	117	2e-23
209	emb|X68901.1|CHCPRRNX3 Chloroplast Chlamydomonas pallidostigmati...	117	2e-23
210	emb|X61179.1|CHPLIB P.littoralis chloroplast DNA for 23S rRNA (p...	117	2e-23
211	emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL g...	117	2e-23
212	emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and ...	117	2e-23
213	emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL ...	117	2e-23
214	gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subu...	115	6e-23
215	gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subu...	115	6e-23
216	gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subu...	115	6e-23
217	gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subu...	115	6e-23
218	gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subu...	115	6e-23
219	gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subu...	115	6e-23
220	gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subun...	115	6e-23
221	gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subun...	115	6e-23
222	gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subun...	115	6e-23
223	gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subun...	115	6e-23
224	gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subun...	115	6e-23
225	gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subun...	115	6e-23
226	gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subun...	115	6e-23
227	gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large sub...	115	6e-23
228	gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast ...	115	6e-23
229	gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast l...	115	6e-23
230	emb|X68924.1|CHCSRRNX2 Chloroplast Chlamydomonas sp. 66.72 rrnL ...	115	6e-23
231	emb|X68929.1|CHCKRRNL3 Chloroplast Chlamydomonas komma rrnL gene...	115	6e-23
232	gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosoma...	113	2e-22
233	gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subu...	111	1e-21
234	gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-...	111	1e-21
235	gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large s...	111	1e-21
236	gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large...	111	1e-21
237	dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g...	111	1e-21
238	gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit rib...	111	1e-21
239	emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flankin...	111	1e-21
240	emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL ge...	111	1e-21
241	emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL ...	111	1e-21
242	gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome	111	1e-21
243	gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, compl...	109	4e-21
244	gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete g...	109	4e-21
245	gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large ...	109	4e-21
246	gb|L43538.1|CRECPRRNLA Chlamydomonas peterfii chloroplast large ...	109	4e-21
247	gb|L44123.1|CMJCPRGOL Chlorococcum echinozygotum chloroplast lar...	109	4e-21
248	gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal ...	109	4e-21
249	emb|X68887.1|CHCPRRNL1 Chloroplast Chlamydomonas peterfii rrnL g...	109	4e-21
250	emb|X68911.1|CHCMRRNL2 Chloroplast Chlamydomonas mexicana rrnL g...	109	4e-21
251	dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complet...	109	4e-21
252	gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene...	107	2e-20
253	gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RN...	107	2e-20
254	gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal ...	107	2e-20
255	gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosoma...	107	2e-20
256	gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subun...	107	2e-20
257	gb|L43540.1|DUNCPRRNL Dunaliella parva	107	2e-20
258	gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribos...	105	6e-20
259	gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA...	105	6e-20
260	gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene,...	105	6e-20
261	gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosoma...	105	6e-20
262	gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S riboso...	105	6e-20
263	gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosom...	105	6e-20
264	gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, ...	105	6e-20
265	gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal...	105	6e-20
266	gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S riboso...	105	6e-20
267	gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple...	105	6e-20
268	gb|AF332535.1|AF332535 Eimeria separata 23S ribosomal RNA gene, ...	105	6e-20
269	dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome	105	6e-20
270	gb|CP000110.1| Synechococcus sp. CC9605, complete genome	103	2e-19
271	gb|CP000097.1| Synechococcus sp. CC9902, complete genome	103	2e-19
272	gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA ge...	103	2e-19
273	gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, pa...	103	2e-19
274	emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segmen...	103	2e-19
275	dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome	103	2e-19
276	emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (...	103	2e-19
277	gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large s...	101	1e-18
278	gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit riboso...	101	1e-18
279	emb|X68897.1|CHCIRRNX5 Chloroplast Chlamydomonas indica rrnL gen...	101	1e-18
280	emb|X68916.1|CHCMRRNX4 Chloroplast C.moewusii rrnL gene, exon 4	101	1e-18
281	emb|Z17234.1|CHCERRNL Chloroplast Chlamydomonas eugametos rrnL gene	101	1e-18
282	emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrn...	101	1e-18
283	gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence	100	4e-18
284	gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-...	100	4e-18
285	gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal...	100	4e-18
286	gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subu...	98	1e-17
287	gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subu...	98	1e-17
288	gb|AF332525.1|AF332525 Eimeria chaetodipi 23S ribosomal RNA gene...	98	1e-17
289	gb|AY338246.1| Cosmopsarus regius coccidium MS-2003 23S ribosoma...	98	1e-17
290	gb|AY283808.1| Atoxoplasma sp. MS-2003 genotype 21B large subuni...	98	1e-17
291	gb|AY283806.1| Atoxoplasma sp. MS-2003 large subunit ribosomal R...	98	1e-17
292	gb|AY283805.1| Atoxoplasma sp. MS-2003 large subunit ribosomal R...	98	1e-17
293	gb|AY283804.1| Atoxoplasma sp. MS-2003 large subunit ribosomal R...	98	1e-17
294	gb|AY283803.1| Atoxoplasma sp. MS-2003 large subunit ribosomal R...	98	1e-17
295	gb|AF307889.1|AF307889 Eimeria acervulina 23S ribosomal RNA gene...	98	1e-17
296	gb|AF307887.1|AF307887 Eimeria falciformis 23S ribosomal RNA gen...	98	1e-17
297	gb|AF307886.1|AF307886 Eimeria nieschulzi 23S ribosomal RNA gene...	98	1e-17
298	gb|AF307882.1|AF307882 Eimeria rioarribaensis 23S ribosomal RNA ...	98	1e-17
299	gb|AF307881.1|AF307881 Eimeria antrozoi 23S ribosomal RNA gene, ...	98	1e-17
300	gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g...	96	6e-17
301	gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 ...	96	6e-17
302	gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150...	96	6e-17
303	emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome;...	96	6e-17
304	emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;...	96	6e-17
305	emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; se...	96	6e-17
306	gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1...	96	6e-17
307	gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome	94	2e-16
308	gb|L43500.1|RTCCPRRNL Carteria olivieri	94	2e-16
309	gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit riboso...	94	2e-16
310	gb|AF332533.1|AF332533 Eimeria reedi 23S ribosomal RNA gene, par...	94	2e-16
311	gb|AF332529.1|AF332529 Eimeria leucopi 23S ribosomal RNA gene, p...	94	2e-16
312	gb|AF307884.1|AF307884 Eimeria onychomysis 23S ribosomal RNA gen...	94	2e-16
313	gb|L42847.1|MIQCPRGOL Micromonas pusilla large subunit ribosomal...	92	9e-16
314	gb|AY357212.1| Cucumis melo 5S ribosomal RNA (rrn5-3) gene, comp...	90	4e-15
315	gb|AY217738.1| Eimeria tenella chloroplast, complete genome	90	4e-15
316	emb|X70810.2|CLEGCGA Euglena gracilis chloroplast complete genome	90	4e-15
317	emb|AJ294725.1|ALO294725 Astasia longa complete chloroplast genome	90	4e-15
318	gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA ...	90	4e-15
319	gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete g...	90	4e-15
320	gb|AF332539.1|AF332539 Isospora insularius 23S ribosomal RNA gen...	90	4e-15
321	gb|AF332532.1|AF332532 Eimeria peromysci 23S ribosomal RNA gene,...	90	4e-15
322	gb|AF332530.1|AF332530 Eimeria maxima 23S ribosomal RNA gene, pa...	90	4e-15
323	gb|AF332528.1|AF332528 Eimeria langebarteli 23S ribosomal RNA ge...	90	4e-15
324	gb|AF332527.1|AF332527 Eimeria dipodomysis 23S ribosomal RNA gen...	90	4e-15
325	gb|L42837.1|CMKCPRGOL Chamaetrichon capsulatum large subunit rib...	90	4e-15
326	gb|AF307888.1|AF307888 Eimeria tenella 23S ribosomal RNA gene, p...	90	4e-15
327	emb|X13310.1|CHEG23S Euglena gracilis chloroplast 23S ribosomal ...	90	4e-15
328	emb|X12890.1|CHEGRRNC Euglena gracilis rrnC operon containing 16...	90	4e-15
329	gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA g...	90	4e-15
330	gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-...	88	1e-14
331	gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast,...	86	6e-14
332	gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-s...	86	6e-14
333	gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosom...	84	2e-13
334	dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome	84	2e-13
335	emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa...	84	2e-13
336	emb|AJ001025.1|CLPACHLLN Picea abies chloroplast DNA for chlL, t...	82	9e-13
337	gb|AF332534.1|AF332534 Eimeria scholtysecki 23S ribosomal RNA ge...	82	9e-13
338	gb|AF332531.1|AF332531 Eimeria papillata 23S ribosomal RNA gene,...	82	9e-13
339	gb|AF332526.1|AF332526 Eimeria chobotari 23S ribosomal RNA gene,...	82	9e-13
340	gb|AF332524.1|AF332524 Caryospora sp. 23S ribosomal RNA gene, pa...	82	9e-13
341	gb|AF307883.1|AF307883 Eimeria arizonensis 23S ribosomal RNA gen...	82	9e-13
342	emb|Y14408.1|ETPLH32 Eimeria tenella plastid-like DNA (clone H32)	82	9e-13
343	gb|AF332536.1|AF332536 Eimeria sevilletensis 23S ribosomal RNA g...	80	3e-12
344	gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast larg...	78	1e-11
345	gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-sub...	78	1e-11
346	gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA...	78	1e-11
347	ref|NM_195959.1| Oryza sativa (japonica cultivar-group) hypothet...	76	5e-11
348	gb|AF307885.1|AF307885 Eimeria albigulae 23S ribosomal RNA gene,...	74	2e-10
349	gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, com...	72	8e-10
350	gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large...	70	3e-09
351	gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-su...	70	3e-09
352	gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome	66	5e-08
353	gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mit...	66	5e-08
354	gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion...	66	5e-08
355	gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion...	66	5e-08
356	gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0...	66	5e-08
357	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	66	5e-08
358	gb|AF204715.1|AF204715 Hovea chorizemifolia 5S ribosomal DNA non...	66	5e-08
359	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	66	5e-08
360	gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subuni...	64	2e-07
361	gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rr...	64	2e-07
362	gb|M36716.1|MZEMTCPAA Maize mitochondrion with chloroplast inser...	62	8e-07
363	gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome...	60	3e-06
364	gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome...	60	3e-06
365	gb|AF304322.1|AF304322 Neospora caninum large subunit ribosomal ...	58	1e-05
366	gb|AF304319.1|AF304319 Neospora caninum small subunit ribosomal ...	58	1e-05
367	gb|AF304316.1|AF304316 Neospora caninum large subunit ribosomal ...	58	1e-05
368	gb|AF204721.1|AF204721 Hovea stricta 5S ribosomal DNA non-transc...	58	1e-05
369	gb|AF204720.1|AF204720 Hovea pungens 5S ribosomal DNA non-transc...	58	1e-05
370	gb|U87145.2|U87145 Toxoplasma gondii chloroplast, complete genome	58	1e-05
371	emb|Y11430.1|TGTRNARRN T.gondii plastid DNA for tRNA-Ala, tRNA-A...	58	1e-05
372	gb|AY172857.1| Plasmodium sp. large subunit ribosomal RNA gene, ...	56	5e-05
373	gb|AY172856.1| Plasmodium sp. large subunit ribosomal RNA gene, ...	56	5e-05
374	gb|AY172855.1| Plasmodium sp. large subunit ribosomal RNA gene, ...	56	5e-05
375	gb|AY172854.1| Plasmodium sp. large subunit ribosomal RNA gene, ...	56	5e-05
376	gb|AY172853.1| Plasmodium sp. large subunit ribosomal RNA gene, ...	56	5e-05
377	gb|AY172852.1| Haemoproteus sp. large subunit ribosomal RNA gene...	56	5e-05
378	gb|AY172851.1| Plasmodium sp. large subunit ribosomal RNA gene, ...	56	5e-05
379	emb|X95275.2|PFCOMPIRA Plasmodium falciparum complete gene map o...	56	5e-05
380	emb|AL935261.1| Lactobacillus plantarum strain WCFS1 complete ge...	56	5e-05
381	emb|AL935260.1| Lactobacillus plantarum strain WCFS1 complete ge...	56	5e-05
382	emb|AL935258.1| Lactobacillus plantarum strain WCFS1 complete ge...	56	5e-05
383	emb|AL935253.1| Lactobacillus plantarum strain WCFS1 complete ge...	56	5e-05
384	gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit r...	56	5e-05
385	gb|U97565.1|PMU97565 Plasmodium malariae extrachromosomal plasti...	56	5e-05
386	gb|U97564.1|PVU97564 Plasmodium vivax extrachromosomal plastid l...	56	5e-05
387	gb|U97563.1|PVU97563 Plasmodium vivax extrachromosomal plastid l...	56	5e-05
388	gb|U97562.1|PVU97562 Plasmodium vivax extrachromosomal plastid l...	56	5e-05
389	gb|U97561.1|PVU97561 Plasmodium vivax extrachromosomal plastid l...	56	5e-05
390	gb|U97559.1|PFU97559 Plasmodium falciparum extrachromosomal plas...	56	5e-05
391	gb|U97558.1|PFU97558 Plasmodium falciparum extrachromosomal plas...	56	5e-05
392	gb|AF182847.1|AF182847 Plasmodium chabaudi from Australia large ...	56	5e-05
393	gb|AF182846.1|AF182846 Plasmodium malariae from Burma large subu...	56	5e-05
394	gb|U79731.1|PBU79731 Plasmodium berghei extrachromosomal plastid...	56	5e-05
395	emb|X75545.1|PFTRNA P.falciparum gene for tRNA I,A,N,L,R,V,R,M,T	56	5e-05
396	emb|X61660.1|PFLSRRN Plasmodium falciparum gene for a large subu...	56	5e-05
397	emb|AL935255.1| Lactobacillus plantarum strain WCFS1 complete ge...	54	2e-04
398	dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co...	54	2e-04
399	dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp...	52	8e-04
400	gb|U97557.1|PFU97557 Plasmodium falciparum extrachromosomal plas...	50	0.003
401	emb|X68423.1|PF23SRRN P.frisingensis gene for 23S rRNA	50	0.003
402	gb|U97560.1|PFU97560 Plasmodium falciparum extrachromosomal plas...	48	0.012
403	gb|U79732.1|PBU79732 Plasmodium berghei extrachromosomal plastid...	48	0.012
404	gb|AF272630.1| Ureaplasma parvum serovar 14 23S ribosomal RNA an...	46	0.049
405	gb|AF272629.1| Ureaplasma parvum serovar 6 23S ribosomal RNA and...	46	0.049
406	gb|AF272628.1| Ureaplasma parvum serovar 1 23S ribosomal RNA and...	46	0.049
407	gb|AF272627.1| Ureaplasma urealyticum serovar 11 23S ribosomal R...	46	0.049
408	gb|AF272626.1| Ureaplasma urealyticum serovar 10 23S ribosomal R...	46	0.049
409	gb|AF272625.1| Ureaplasma urealyticum serovar 8 23S ribosomal RN...	46	0.049
410	gb|AF272624.1| Ureaplasma urealyticum serovar 7 23S ribosomal RN...	46	0.049
411	gb|AF272623.1| Ureaplasma urealyticum serovar 5 23S ribosomal RN...	46	0.049
412	gb|AF272622.1| Ureaplasma urealyticum serovar 13 23S ribosomal R...	46	0.049
413	gb|AF272621.1| Ureaplasma urealyticum serovar 12 23S ribosomal R...	46	0.049
414	gb|AF272620.1| Ureaplasma urealyticum serovar 9 23S ribosomal RN...	46	0.049
415	gb|AF272619.1| Ureaplasma urealyticum serovar 4 23S ribosomal RN...	46	0.049
416	gb|AF272618.1| Ureaplasma urealyticum serovar 2 23S ribosomal RN...	46	0.049
417	gb|AF272617.1| Ureaplasma parvum serovar 14 23S ribosomal RNA an...	46	0.049
418	gb|AF272616.1| Ureaplasma parvum serovar 6 23S ribosomal RNA and...	46	0.049
419	gb|AF272615.1| Ureaplasma parvum serovar 1 23S ribosomal RNA and...	46	0.049
420	gb|AF272614.1| Ureaplasma urealyticum serovar 13 23S ribosomal R...	46	0.049
421	gb|AF272613.1| Ureaplasma urealyticum serovar 12 23S ribosomal R...	46	0.049
422	gb|AF272612.1| Ureaplasma urealyticum serovar 11 23S ribosomal R...	46	0.049
423	gb|AF272611.1| Ureaplasma urealyticum serovar 10 23S ribosomal R...	46	0.049
424	gb|AF272610.1| Ureaplasma urealyticum serovar 9 23S ribosomal RN...	46	0.049
425	gb|AF272609.1| Ureaplasma urealyticum serovar 8 23S ribosomal RN...	46	0.049
426	gb|AF272608.1| Ureaplasma urealyticum serovar 7 23S ribosomal RN...	46	0.049
427	gb|AF272607.1| Ureaplasma urealyticum serovar 5 23S ribosomal RN...	46	0.049
428	gb|AF272606.1| Ureaplasma urealyticum serovar 4 23S ribosomal RN...	46	0.049
429	gb|AF272605.1| Ureaplasma urealyticum serovar 2 23S ribosomal RN...	46	0.049
430	gb|DQ186202.1| Thalassiosira pseudonana mitochondrion, complete ...	46	0.049
431	gb|AE002127.1| Ureaplasma parvum serovar 3 str. ATCC 700970 sect...	46	0.049
432	gb|AE002112.1| Ureaplasma parvum serovar 3 str. ATCC 700970 sect...	46	0.049
433	gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118...	46	0.049
434	gb|AY359242.1| Pseudendoclonium akinetum mitochondrion, complete...	46	0.049
435	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.049
436	dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic D...	46	0.049
437	dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.049
438	gb|AY863211.1| Mortierella verticillata mitochondrion, complete ...	46	0.049
439	gb|AY305265.1| Cucumis melo clone M5-P11 cob gene, complete sequ...	44	0.19
440	gb|DQ398104.1| Helicosporidium sp. ex Simulium jonesii plastid, ...	44	0.19
441	gb|AY335888.1| Eucalanus elongatus 16S ribosomal RNA gene, parti...	44	0.19
442	gb|AC152067.21| Medicago truncatula clone mth2-22g24, complete s...	44	0.19
443	gb|U97556.1|PFU97556 Plasmodium falciparum extrachromosomal plas...	44	0.19
444	gb|AY182007.1| Monoblepharella sp. JEL15 mitochondrion, complete...	44	0.19
445	gb|AY182006.1| Harpochytrium sp. JEL105 mitochondrion, complete ...	44	0.19
446	gb|AY182005.1| Harpochytrium sp. JEL94 mitochondrion, complete g...	44	0.19
447	gb|AF036708.1|AF036708 Mycoplasma gallisepticum strain A5969var....	44	0.19
448	dbj|AB125748.1| Trichiurus sp. 1-Nakabo mitochondrial gene for 1...	44	0.19
449	emb|AJ307977.1|ITA307977 Ilyobacter tartaricus 23S rRNA gene, DS...	44	0.19
450	emb|AJ307976.1|IIN307976 Ilyobacter insuetus 23S rRNA gene, stra...	44	0.19
451	emb|AJ307975.1|IPO307975 Ilyobacter polytropus 23S rRNA gene, DS...	44	0.19
452	gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome	44	0.19
453	gb|L08897.1|MYCRRSA Mycoplasma gallisepticum (strain A5969) 16S-...	44	0.19
454	emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Il...	44	0.19
455	gb|AY863213.1| Smittium culisetae mitochondrion, complete genome	44	0.19
456	gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome	42	0.76
457	gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome	42	0.76
458	gb|AY335891.1| Subeucalanus crassus 16S ribosomal RNA gene, part...	42	0.76
459	gb|AY335889.1| Subeucalanus mucronatus 16S ribosomal RNA gene, p...	42	0.76
460	gb|AY335887.1| Subeucalanus longiceps 16S ribosomal RNA gene, pa...	42	0.76
461	gb|AY335886.1| Pareucalanus sewelli 16S ribosomal RNA gene, part...	42	0.76
462	gb|AY335879.1| Subeucalanus crassus 16S ribosomal RNA gene, part...	42	0.76
463	gb|AY335877.1| Subeucalanus sp. EG-2003 16S ribosomal RNA gene, ...	42	0.76
464	gb|AY335876.1| Subeucalanus monachus 16S ribosomal RNA gene, par...	42	0.76
465	gb|AY335874.1| Eucalanus inermis 16S ribosomal RNA gene, partial...	42	0.76
466	gb|AY335873.1| Eucalanus californicus 16S ribosomal RNA gene, pa...	42	0.76
467	gb|AY335872.1| Eucalanus bungii 16S ribosomal RNA gene, partial ...	42	0.76
468	emb|AJ011856.1|SCE011856 Saccharomyces cerevisiae complete mitoc...	42	0.76
469	emb|AJ634268.1| Kluyveromyces thermotolerans complete mitochondr...	42	0.76
470	gb|DQ352811.1| Clostridium piliforme isolate R1 16S ribosomal RN...	42	0.76
471	gb|DQ352810.1| Clostridium piliforme isolate CRL 16S ribosomal R...	42	0.76
472	gb|DQ352809.1| Clostridium piliforme isolate 11KD 16S ribosomal ...	42	0.76
473	gb|DQ352808.1| Clostridium piliforme isolate CRL-K 16S ribosomal...	42	0.76
474	gb|DQ352807.1| Clostridium piliforme isolate 7MTS 16S ribosomal ...	42	0.76
475	gb|AF332537.1| Hammondia heydorni 23S ribosomal RNA gene, partia...	42	0.76
476	gb|AF437291.1| Saccharomyces castellii strain NRRL Y-12630 mitoc...	42	0.76
477	gb|L36903.1|YSCMTCG19 Saccharomyces cerevisiae mitochondrion 21S...	42	0.76
478	gb|AE006470.1| Chlorobium tepidum TLS, complete genome	42	0.76
479	dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome	42	0.76
480	gb|AY275450.1| Skistodiaptomus reighardi 16S ribosomal RNA gene,...	42	0.76
481	gb|AY275449.1| Skistodiaptomus pygmaeus 16S ribosomal RNA gene, ...	42	0.76
482	gb|AY275448.1| Skistodiaptomus pallidus 16S ribosomal RNA gene, ...	42	0.76
483	gb|AY275447.1| Skistodiaptomus oregonensis 16S ribosomal RNA gen...	42	0.76
484	gb|AY275446.1| Skistodiaptomus mississippiensis 16S ribosomal RN...	42	0.76
485	gb|AY275445.1| Skistodiaptomus carolinensis 16S ribosomal RNA ge...	42	0.76
486	dbj|AB091772.1| Eucalanus bungii mitochondrial DNA, srRNA to COI...	42	0.76
487	gb|U41288.1|AMU41288 Allomyces macrogynus mitochondrial DNA, com...	42	0.76
488	emb|X68428.1|PN23SRRN P.niger gene for 23S rRNA	42	0.76
489	gb|BC080024.1| Xenopus laevis hypothetical protein LOC446281, mR...	40	3.0
490	gb|AY603007.1| Menticirrhus americanus 16S ribosomal RNA gene, c...	40	3.0
491	gb|AY347307.1| Penicillium marneffei strain MP1 mitochonrion, co...	40	3.0
492	gb|AC102769.11| Mus musculus chromosome 17, clone RP23-89A3, com...	40	3.0
493	emb|X55026.1|MTPACG Podospora anserina complete mitochondrial ge...	40	3.0
494	gb|AY955840.1| Paracoccidioides brasiliensis strain Pb18 mitocho...	40	3.0
495	gb|AE006010.1| Caulobacter crescentus CB15 section 336 of 359 of...	40	3.0
496	gb|AE005930.1| Caulobacter crescentus CB15 section 256 of 359 of...	40	3.0
497	dbj|AP007176.1| Aspergillus oryzae RIB40 mitochondrial DNA, comp...	40	3.0
498	dbj|D14567.1|PECMTLRNA Penicillium urticae mitochondrial l-rRNA ...	40	3.0
499	gb|AF141156.1|AF141156 Vigna unguiculata clone VUVT7APX2 plastid...	40	3.0
500	gb|AF141155.1|AF141155 Vigna unguiculata clone VUVT7APX1 plastid...	40	3.0

---

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
              complete genome
          Length = 134551

 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117827 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 117768

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117767 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 117708

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 117707 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 117648

                                                                    
Query: 181    tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117647 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 117594



 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97329 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 97388

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97389 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 97448

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 97449 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 97508

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97509 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 97562

---

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
              complete genome
          Length = 134551

 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117827 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 117768

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117767 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 117708

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 117707 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 117648

                                                                    
Query: 181    tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117647 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 117594



 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97329 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 97388

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97389 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 97448

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 97449 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 97508

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97509 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 97562

---

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete
              genome
          Length = 134496

 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117776 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 117717

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117716 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 117657

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 117656 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 117597

                                                                    
Query: 181    tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117596 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 117543



 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97274 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 97333

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97334 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 97393

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 97394 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 97453

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97454 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 97507

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                            
Query: 1        atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509907 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 31509966

                                                                            
Query: 61       ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509967 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 31510026

                                                                            
Query: 121      aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
                ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 31510027 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 31510086

                                                                      
Query: 181      tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31510087 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 31510140



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                             
Query: 23      ggactacctgcacctggacagaaagaccct 52
               ||||||||||||||||||||||||||||||
Sbjct: 3507532 ggactacctgcacctggacagaaagaccct 3507503

---

>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete
             sequence
          Length = 133449

 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Minus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82689 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 82630

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82629 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 82570

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 82569 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 82510

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82509 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 82456

---

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
              complete sequence
          Length = 145980

 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124370 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 124429

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124430 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 124489

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 124490 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 124549

                                                                    
Query: 181    tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124550 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 124603



 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16096 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 16155

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16156 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 16215

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 16216 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 16275

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16276 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 16329

---

>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21,
              complete sequence
          Length = 167113

 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142904 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 142963

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142964 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 143023

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 143024 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 143083

                                                                    
Query: 181    tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143084 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 143137

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                           
Query: 1       atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9270256 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 9270315

                                                                           
Query: 61      ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9270316 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 9270375

                                                                           
Query: 121     aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
               ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 9270376 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 9270435

                                                                     
Query: 181     tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9270436 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 9270489



 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                           
Query: 1       atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9229756 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 9229815

                                                                           
Query: 61      ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9229816 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 9229875

                                                                           
Query: 121     aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
               ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 9229876 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 9229935

                                                                     
Query: 181     tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9229936 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 9229989



 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                           
Query: 1       atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9166344 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 9166403

                                                                           
Query: 61      ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9166404 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 9166463

                                                                           
Query: 121     aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
               ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 9166464 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 9166523

                                                                     
Query: 181     tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9166524 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 9166577



 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                           
Query: 1       atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9058170 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 9058229

                                                                           
Query: 61      ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9058230 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 9058289

                                                                           
Query: 121     aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
               ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 9058290 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 9058349

                                                                     
Query: 181     tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9058350 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 9058403



 Score =  414 bits (209), Expect = e-113
 Identities = 226/234 (96%)
 Strand = Plus / Minus

                                                                            
Query: 1        atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
                ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 23632940 atagacatgtctgtgaagatgcggactacctgcacctagacagaaagaccctatgaagct 23632881

                                                                            
Query: 61       ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23632880 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 23632821

                                                                            
Query: 121      aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
                ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 23632820 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 23632761

                                                                      
Query: 181      tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23632760 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 23632707

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                            
Query: 1        atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31600423 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 31600482

                                                                            
Query: 61       ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31600483 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 31600542

                                                                            
Query: 121      aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
                ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 31600543 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 31600602

                                                                      
Query: 181      tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31600603 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 31600656



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                             
Query: 23      ggactacctgcacctggacagaaagaccct 52
               ||||||||||||||||||||||||||||||
Sbjct: 3507643 ggactacctgcacctggacagaaagaccct 3507614

---

>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full
           insert sequence
          Length = 1809

 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 821

                                                                       
Query: 61  ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 881

                                                                       
Query: 121 aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
           ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 941

                                                                 
Query: 181 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 995

---

>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full
            insert sequence
          Length = 1345

 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982  atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 1041

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 1101

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 1161

                                                                  
Query: 181  tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 1215

---

>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full
            insert sequence
          Length = 2146

 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1178 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 1237

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1238 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 1297

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1298 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 1357

                                                                  
Query: 181  tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1358 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 1411

---

>dbj|AK060344.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-E03, full
           insert sequence
          Length = 1200

 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 333

                                                                       
Query: 61  ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 393

                                                                       
Query: 121 aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
           ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 453

                                                                 
Query: 181 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 507

---

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117770 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 117711

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117710 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 117651

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 117650 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 117591

                                                                    
Query: 181    tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117590 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 117537



 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97269 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 97328

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97329 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 97388

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 97389 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 97448

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97449 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 97502

---

>gb|U49840.1|OSU49840 Oryza sativa subsp. indica large ribosomal RNA gene, chloroplast
           gene encoding chloroplast rRNA, partial sequence
          Length = 1130

 Score =  422 bits (213), Expect = e-115
 Identities = 227/234 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 411

                                                                       
Query: 61  ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 471

                                                                       
Query: 121 aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
           ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 531

                                                                 
Query: 181 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 585

---

>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score =  414 bits (209), Expect = e-113
 Identities = 226/234 (96%)
 Strand = Plus / Minus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 75621 atagacatgtctgtgaagatgcggactacctgcacctagacagaaagaccctatgaagct 75562

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75561 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 75502

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 75501 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 75442

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75441 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 75388

---

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  414 bits (209), Expect = e-113
 Identities = 226/234 (96%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95500 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 95559

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95560 ttactgttccctgtgattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 95619

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 95620 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 95679

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95680 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 95733

---

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  414 bits (209), Expect = e-113
 Identities = 226/234 (96%)
 Strand = Plus / Minus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42786 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 42727

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 42726 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 42667

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 42666 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 42607

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42606 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 42553



 Score =  414 bits (209), Expect = e-113
 Identities = 226/234 (96%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22331 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 22390

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 22391 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 22450

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 22451 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 22510

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22511 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 22564

---

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  414 bits (209), Expect = e-113
 Identities = 226/234 (96%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29564 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 29623

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29624 ttactgttccctgtgattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 29683

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 29684 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 29743

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29744 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 29797

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  414 bits (209), Expect = e-113
 Identities = 226/234 (96%)
 Strand = Plus / Plus

                                                                            
Query: 1        atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10389108 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 10389167

                                                                            
Query: 61       ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10389168 ttactgttccctgtgattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 10389227

                                                                            
Query: 121      aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
                ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 10389228 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 10389287

                                                                      
Query: 181      tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10389288 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 10389341



 Score =  400 bits (202), Expect = e-109
 Identities = 227/237 (95%), Gaps = 3/237 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1        atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19940241 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 19940300

                                                                            
Query: 61       ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19940301 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 19940360

                                                                            
Query: 121      aggcccccttcc---nnnnnnncccgagccatcagtgagataccactctggaagagctcg 177
                ||||||||||||          ||||||||||||||||||||||||||||||||||||||
Sbjct: 19940361 aggcccccttccggggggggggcccgagccatcagtgagataccactctggaagagctcg 19940420

                                                                         
Query: 178      gattctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19940421 gattctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 19940477



 Score =  345 bits (174), Expect = 4e-92
 Identities = 197/207 (95%)
 Strand = Plus / Minus

                                                                            
Query: 1        atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
                |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 10275190 atagacatgtctgtgaagatgcggactacctgcatctggacataaagaccctatgaagct 10275131

                                                                            
Query: 61       ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10275130 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaagacgaaga 10275071

                                                                            
Query: 121      aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
                ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 10275070 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 10275011

                                           
Query: 181      tctaaccttgtgtcagacccgcgggcc 207
                |||||||||||||||||||||||||||
Sbjct: 10275010 tctaaccttgtgtcagacccgcgggcc 10274984



 Score =  230 bits (116), Expect = 2e-57
 Identities = 143/154 (92%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                            
Query: 85       gggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccnnnnnnncccga 144
                ||||||||||||||||||||||||||||||||||||||||||||||||       |||||
Sbjct: 10274988 gggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccgggggggcccga 10274929

                                                                            
Query: 145      gccatcagtgagataccactctggaagagctcggattctaaccttgtgtcag----accc 200
                ||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||
Sbjct: 10274928 gccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacccaccc 10274869

                                                  
Query: 201      gcgggccaagggacagtctcaggtagacagtttc 234
                ||||||||||||||||||||||||||||||||||
Sbjct: 10274868 gcgggccaagggacagtctcaggtagacagtttc 10274835

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  414 bits (209), Expect = e-113
 Identities = 226/234 (96%)
 Strand = Plus / Minus

                                                                           
Query: 1       atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240025 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 9239966

                                                                           
Query: 61      ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9239965 ttactgttccctgggattggctttgggcctttcctacgcagcttaggtggaaggcgaaga 9239906

                                                                           
Query: 121     aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
               ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 9239905 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 9239846

                                                                     
Query: 181     tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9239845 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 9239792

---

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  414 bits (209), Expect = e-113
 Identities = 226/234 (96%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121626 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 121567

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 121566 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 121507

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 121506 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 121447

                                                                    
Query: 181    tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121446 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 121393



 Score =  414 bits (209), Expect = e-113
 Identities = 226/234 (96%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101211 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 101270

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 101271 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 101330

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 101331 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 101390

                                                                    
Query: 181    tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101391 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 101444

---

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  414 bits (209), Expect = e-113
 Identities = 226/234 (96%)
 Strand = Plus / Minus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51238 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 51179

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 51178 ttactgttccctgggattggctttgggcctttcctacgcagcttaggtggaaggcgaaga 51119

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 51118 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 51059

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51058 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 51005

---

>dbj|AK108459.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-D06, full
           insert sequence
          Length = 1449

 Score =  414 bits (209), Expect = e-113
 Identities = 223/230 (96%)
 Strand = Plus / Plus

                                                                       
Query: 5   acatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttac 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   acatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttac 60

                                                                       
Query: 65  tgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggc 120

                                                                       
Query: 125 ccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggattcta 184
           ||||||||       |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggattcta 180

                                                             
Query: 185 accttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 230

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  414 bits (209), Expect = e-113
 Identities = 226/234 (96%)
 Strand = Plus / Plus

                                                                            
Query: 1        atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10395147 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 10395206

                                                                            
Query: 61       ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10395207 ttactgttccctgtgattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 10395266

                                                                            
Query: 121      aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
                ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 10395267 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 10395326

                                                                      
Query: 181      tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10395327 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 10395380



 Score =  400 bits (202), Expect = e-109
 Identities = 227/237 (95%), Gaps = 3/237 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1        atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19951517 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 19951576

                                                                            
Query: 61       ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19951577 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 19951636

                                                                            
Query: 121      aggcccccttcc---nnnnnnncccgagccatcagtgagataccactctggaagagctcg 177
                ||||||||||||          ||||||||||||||||||||||||||||||||||||||
Sbjct: 19951637 aggcccccttccggggggggggcccgagccatcagtgagataccactctggaagagctcg 19951696

                                                                         
Query: 178      gattctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19951697 gattctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 19951753



 Score =  345 bits (174), Expect = 4e-92
 Identities = 197/207 (95%)
 Strand = Plus / Minus

                                                                            
Query: 1        atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
                |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 10281229 atagacatgtctgtgaagatgcggactacctgcatctggacataaagaccctatgaagct 10281170

                                                                            
Query: 61       ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10281169 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaagacgaaga 10281110

                                                                            
Query: 121      aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
                ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 10281109 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 10281050

                                           
Query: 181      tctaaccttgtgtcagacccgcgggcc 207
                |||||||||||||||||||||||||||
Sbjct: 10281049 tctaaccttgtgtcagacccgcgggcc 10281023



 Score =  230 bits (116), Expect = 2e-57
 Identities = 143/154 (92%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                            
Query: 85       gggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccnnnnnnncccga 144
                ||||||||||||||||||||||||||||||||||||||||||||||||       |||||
Sbjct: 10281027 gggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccgggggggcccga 10280968

                                                                            
Query: 145      gccatcagtgagataccactctggaagagctcggattctaaccttgtgtcag----accc 200
                ||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||
Sbjct: 10280967 gccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacccaccc 10280908

                                                  
Query: 201      gcgggccaagggacagtctcaggtagacagtttc 234
                ||||||||||||||||||||||||||||||||||
Sbjct: 10280907 gcgggccaagggacagtctcaggtagacagtttc 10280874

---

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  414 bits (209), Expect = e-113
 Identities = 226/234 (96%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122343 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 122284

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 122283 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 122224

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 122223 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 122164

                                                                    
Query: 181    tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122163 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 122110



 Score =  414 bits (209), Expect = e-113
 Identities = 226/234 (96%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101888 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 101947

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 101948 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 102007

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 102008 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 102067

                                                                    
Query: 181    tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102068 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 102121

---

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  414 bits (209), Expect = e-113
 Identities = 226/234 (96%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117962 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 117903

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117902 ttactgtttcctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 117843

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 117842 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 117783

                                                                    
Query: 181    tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117782 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 117729



 Score =  414 bits (209), Expect = e-113
 Identities = 226/234 (96%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96932 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 96991

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96992 ttactgtttcctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 97051

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 97052 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 97111

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97112 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 97165

---

>dbj|AK059311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-G08, full
           insert sequence
          Length = 2105

 Score =  412 bits (208), Expect = e-112
 Identities = 222/229 (96%)
 Strand = Plus / Plus

                                                                       
Query: 6   catgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttact 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   catgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttact 60

                                                                       
Query: 66  gttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcc 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcc 120

                                                                       
Query: 126 cccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaa 185
           |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cccttccgggggggcccgagccatcagtgagataccactctggaagagctcggattctaa 180

                                                            
Query: 186 ccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 229

---

>dbj|AK061169.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-B02, full
           insert sequence
          Length = 1006

 Score =  408 bits (206), Expect = e-111
 Identities = 227/235 (96%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37  atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 96

                                                                       
Query: 61  ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 156

                                                                       
Query: 121 aggcccccttcc-nnnnnnncccgagccatcagtgagataccactctggaagagctcgga 179
           ||||||||||||        ||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 aggcccccttccggggggggcccgagccatcagtgagataccactctggaagagctcgga 216

                                                                  
Query: 180 ttctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ttctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 271

---

>dbj|AK059717.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-G05, full
           insert sequence
          Length = 1555

 Score =  408 bits (206), Expect = e-111
 Identities = 223/231 (96%)
 Strand = Plus / Plus

                                                                       
Query: 4   gacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttta 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttta 60

                                                                       
Query: 64  ctgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 123
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61  ctgttccctgggattggctttgggcctttcctgcgcagcttaggtgggaggcgaagaagg 120

                                                                       
Query: 124 cccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggattct 183
           |||||||||       ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggattct 180

                                                              
Query: 184 aaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 231

---

>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete
             sequence
          Length = 116932

 Score =  400 bits (202), Expect = e-109
 Identities = 227/237 (95%), Gaps = 3/237 (1%)
 Strand = Plus / Minus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45802 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 45743

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45742 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 45683

                                                                         
Query: 121   aggcccccttcc---nnnnnnncccgagccatcagtgagataccactctggaagagctcg 177
             ||||||||||||          ||||||||||||||||||||||||||||||||||||||
Sbjct: 45682 aggcccccttccggggggggggcccgagccatcagtgagataccactctggaagagctcg 45623

                                                                      
Query: 178   gattctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45622 gattctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 45566

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  398 bits (201), Expect = e-108
 Identities = 224/234 (95%)
 Strand = Plus / Minus

                                                                           
Query: 1       atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
               ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 5633731 atagacatgtctgtgaagatgtggactacctgcacctagacagaaagaccctatgaagct 5633672

                                                                           
Query: 61      ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
               |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5633671 ttactgttccctgggattggctttgggcctttcctgtgcagcttaggtggaaggcgaaga 5633612

                                                                           
Query: 121     aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
               ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5633611 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 5633552

                                                                     
Query: 181     tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5633551 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 5633498



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 42/42 (100%)
 Strand = Plus / Minus

                                                          
Query: 91       ttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 132
                ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13451568 ttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 13451527

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  398 bits (201), Expect = e-108
 Identities = 224/234 (95%)
 Strand = Plus / Minus

                                                                           
Query: 1       atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
               ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 5633720 atagacatgtctgtgaagatgtggactacctgcacctagacagaaagaccctatgaagct 5633661

                                                                           
Query: 61      ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
               |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5633660 ttactgttccctgggattggctttgggcctttcctgtgcagcttaggtggaaggcgaaga 5633601

                                                                           
Query: 121     aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
               ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5633600 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 5633541

                                                                     
Query: 181     tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5633540 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 5633487



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 42/42 (100%)
 Strand = Plus / Minus

                                                          
Query: 91       ttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 132
                ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13405842 ttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 13405801

---

>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 139684

 Score =  398 bits (201), Expect = e-108
 Identities = 224/234 (95%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 19154 atagacatgtctgtgaagatgtggactacctgcacctagacagaaagaccctatgaagct 19213

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 19214 ttactgttccctgggattggctttgggcctttcctgtgcagcttaggtggaaggcgaaga 19273

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 19274 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 19333

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19334 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 19387

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score =  391 bits (197), Expect = e-106
 Identities = 223/234 (95%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 814891 atagacatgtctgtgaagatgcggactacctacacctagacagaaaaaccctatgaagct 814950

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 814951 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaagcgaaga 815010

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 815011 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 815070

                                                                    
Query: 181    tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815071 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 815124

---

>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1442_E05
          Length = 162407

 Score =  391 bits (197), Expect = e-106
 Identities = 223/234 (95%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 24099 atagacatgtctgtgaagatgcggactacctacacctagacagaaaaaccctatgaagct 24158

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 24159 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaagcgaaga 24218

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 24219 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 24278

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24279 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 24332

---

>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0036E06
          Length = 137926

 Score =  391 bits (197), Expect = e-106
 Identities = 223/234 (95%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 93022 atagacatgtctgtgaagatgcggactacctacacctagacagaaaaaccctatgaagct 93081

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 93082 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaagcgaaga 93141

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 93142 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 93201

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93202 tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 93255

---

>dbj|AK059370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-E12, full
           insert sequence
          Length = 1741

 Score =  389 bits (196), Expect = e-105
 Identities = 210/217 (96%)
 Strand = Plus / Plus

                                                                       
Query: 18  gatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccctgggat 77
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccctgggat 60

                                                                       
Query: 78  tggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccnnnnn 137
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 61  tggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccggggg 120

                                                                       
Query: 138 nncccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcaga 197
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggcccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcaga 180

                                                
Query: 198 cccgcgggccaagggacagtctcaggtagacagtttc 234
           |||||||||||||||||||||||||||||||||||||
Sbjct: 181 cccgcgggccaagggacagtctcaggtagacagtttc 217

---

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  387 bits (195), Expect = e-104
 Identities = 225/235 (95%), Gaps = 3/235 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117798 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 117739

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117738 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 117679

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              |||  |||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 117678 agg--cccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 117621

                                                                     
Query: 181    tctaaccttgtgtc-agacccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 117620 tctaaccttgtgtcaagacccgcgggccaagggacagtctcaggtagacagtttc 117566



 Score =  387 bits (195), Expect = e-104
 Identities = 225/235 (95%), Gaps = 3/235 (1%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97320 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 97379

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97380 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 97439

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             |||  |||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 97440 agg--cccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 97497

                                                                    
Query: 181   tctaaccttgtgtc-agacccgcgggccaagggacagtctcaggtagacagtttc 234
             |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 97498 tctaaccttgtgtcaagacccgcgggccaagggacagtctcaggtagacagtttc 97552

---

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  385 bits (194), Expect = e-104
 Identities = 225/235 (95%), Gaps = 2/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121569 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 121510

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 121509 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 121450

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctc-gga 179
              ||||||||||||        |||||||||||||||||||||||||||||||||||| |||
Sbjct: 121449 aggcccccttccggggggg-ccgagccatcagtgagataccactctggaagagctcagga 121391

                                                                     
Query: 180    ttctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121390 ttctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 121336



 Score =  385 bits (194), Expect = e-104
 Identities = 225/235 (95%), Gaps = 2/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101168 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 101227

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 101228 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 101287

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctc-gga 179
              ||||||||||||        |||||||||||||||||||||||||||||||||||| |||
Sbjct: 101288 aggcccccttccggggggg-ccgagccatcagtgagataccactctggaagagctcagga 101346

                                                                     
Query: 180    ttctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101347 ttctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 101401

---

>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon
          Length = 8862

 Score =  385 bits (194), Expect = e-104
 Identities = 225/235 (95%), Gaps = 2/235 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7521 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 7580

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 7581 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 7640

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctc-gga 179
            ||||||||||||        |||||||||||||||||||||||||||||||||||| |||
Sbjct: 7641 aggcccccttccggggggg-ccgagccatcagtgagataccactctggaagagctcagga 7699

                                                                   
Query: 180  ttctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7700 ttctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 7754

---

>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA
          Length = 3079

 Score =  385 bits (194), Expect = e-104
 Identities = 225/235 (95%), Gaps = 2/235 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2109 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2168

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2169 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 2228

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctc-gga 179
            ||||||||||||        |||||||||||||||||||||||||||||||||||| |||
Sbjct: 2229 aggcccccttccggggggg-ccgagccatcagtgagataccactctggaagagctcagga 2287

                                                                   
Query: 180  ttctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2288 ttctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 2342

---

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score =  377 bits (190), Expect = e-101
 Identities = 223/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132193 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 132134

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132133 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 132074

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 132073 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 132014

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 132013 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 131959



 Score =  377 bits (190), Expect = e-101
 Identities = 223/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105778 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 105837

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105838 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 105897

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 105898 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 105957

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 105958 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 106012

---

>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast
            gene for chloroplast product
          Length = 3322

 Score =  373 bits (188), Expect = e-100
 Identities = 221/233 (94%), Gaps = 1/233 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2525 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2584

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2585 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 2644

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||||||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 2645 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 2704

                                                                 
Query: 181  tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtt 232
            ||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 2705 tctaaccttgtgtcaggacctgcgggccaagggacagtctcaggtagacagtt 2757

---

>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2899

 Score =  369 bits (186), Expect = 3e-99
 Identities = 222/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2072 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2131

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2132 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 2191

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||||||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 2192 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 2251

                                                                   
Query: 181  tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
            ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 2252 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 2306

---

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score =  369 bits (186), Expect = 3e-99
 Identities = 222/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137679 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 137620

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137619 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 137560

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 137559 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 137500

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 137499 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 137445



 Score =  369 bits (186), Expect = 3e-99
 Identities = 222/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111620 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 111679

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111680 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 111739

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 111740 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 111799

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 111800 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 111854

---

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score =  361 bits (182), Expect = 6e-97
 Identities = 221/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133871 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 133812

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133811 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 133752

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              |||||||||||        |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 133751 aggcccccttcggggggggcccgagccatcagtgagataccactctggaagagctagaat 133692

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 133691 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 133637



 Score =  361 bits (182), Expect = 6e-97
 Identities = 221/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108035 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 108094

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108095 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 108154

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              |||||||||||        |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 108155 aggcccccttcggggggggcccgagccatcagtgagataccactctggaagagctagaat 108214

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 108215 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 108269

---

>gb|AY251296.1| Stellaria longipes 23S ribosomal RNA gene, partial sequence;
           chloroplast gene for chloroplast product
          Length = 480

 Score =  361 bits (182), Expect = 6e-97
 Identities = 221/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37  atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 96

                                                                       
Query: 61  ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 156

                                                                       
Query: 121 aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
           ||||||||||||       ||||||||||| |||||||||||||||||||||||  | ||
Sbjct: 157 aggcccccttccgggggggcccgagccatctgtgagataccactctggaagagcaagaat 216

                                                                  
Query: 181 tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
           ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 217 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 271

---

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score =  361 bits (182), Expect = 6e-97
 Identities = 221/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140072 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 140013

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 140012 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggagggcgaaga 139953

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 139952 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 139893

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 139892 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 139838



 Score =  361 bits (182), Expect = 6e-97
 Identities = 221/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113585 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 113644

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 113645 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggagggcgaaga 113704

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 113705 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 113764

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 113765 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 113819

---

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score =  361 bits (182), Expect = 6e-97
 Identities = 221/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129762 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 129703

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 129702 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 129643

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 129642 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 129583

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||| ||||||||||||||||||
Sbjct: 129582 tctaaccttgtgtcaggacctacgggccaagggacattctcaggtagacagtttc 129528



 Score =  361 bits (182), Expect = 6e-97
 Identities = 221/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103683 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 103742

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 103743 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 103802

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 103803 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 103862

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||| ||||||||||||||||||
Sbjct: 103863 tctaaccttgtgtcaggacctacgggccaagggacattctcaggtagacagtttc 103917

---

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score =  361 bits (182), Expect = 6e-97
 Identities = 221/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134150 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 134091

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134090 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 134031

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              |||||||||||        |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 134030 aggcccccttcggggggggcccgagccatcagtgagataccactctggaagagctagaat 133971

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 133970 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 133916



 Score =  361 bits (182), Expect = 6e-97
 Identities = 221/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108257 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 108316

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108317 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 108376

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              |||||||||||        |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 108377 aggcccccttcggggggggcccgagccatcagtgagataccactctggaagagctagaat 108436

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 108437 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 108491

---

>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
              strain:Columbia
          Length = 154478

 Score =  361 bits (182), Expect = 6e-97
 Identities = 221/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131929 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 131870

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 131869 tcactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 131810

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 131809 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 131750

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 131749 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 131695



 Score =  361 bits (182), Expect = 6e-97
 Identities = 221/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106720 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 106779

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 106780 tcactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 106839

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 106840 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 106899

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 106900 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 106954

---

>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon
          Length = 2900

 Score =  361 bits (182), Expect = 6e-97
 Identities = 221/235 (94%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1639 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 1698

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1699 ttactgttccctgggattggctttgggcctttcctgcgcaccttaggtggaaggcgaaga 1758

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 1759 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 1818

                                                                   
Query: 181  tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
            ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 1819 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 1873

---

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134270 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 134211

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134210 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 134151

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 134150 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 134091

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 134090 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 134036



 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108360 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 108419

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108420 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 108479

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 108480 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 108539

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 108540 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 108594

---

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138328 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 138269

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 138268 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggagggcgaaga 138209

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 138208 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 138149

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 138148 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 138094



 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111732 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 111791

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 111792 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggagggcgaaga 111851

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 111852 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 111911

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 111912 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 111966

---

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137549 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 137490

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137489 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 137430

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 137429 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 137370

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||| || ||||  |||||||||||||||||||||| ||||||||||
Sbjct: 137369 tctaaccttgtgccaggacctacgggccaagggacagtctcaggcagacagtttc 137315



 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112396 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 112455

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112456 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 112515

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 112516 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 112575

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||| || ||||  |||||||||||||||||||||| ||||||||||
Sbjct: 112576 tctaaccttgtgccaggacctacgggccaagggacagtctcaggcagacagtttc 112630

---

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132957 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 132898

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 132897 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggagggcgaaga 132838

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 132837 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 132778

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 132777 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 132723



 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107325 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 107384

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 107385 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggagggcgaaga 107444

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 107445 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 107504

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 107505 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 107559

---

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133515 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 133456

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133455 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 133396

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 133395 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 133336

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 133335 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 133281



 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107521 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 107580

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107581 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 107640

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 107641 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 107700

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 107701 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 107755

---

>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130968 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 130909

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 130908 tcactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 130849

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 130848 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 130789

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 130788 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 130734



 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105796 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 105855

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 105856 tcactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 105915

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 105916 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 105975

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 105976 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 106030

---

>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2927

 Score =  353 bits (178), Expect = 2e-94
 Identities = 221/235 (94%), Gaps = 2/235 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2102 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2161

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2162 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 2221

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||||||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 2222 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 2281

                                                                   
Query: 181  tctaaccttgtgtca-gacccgcgggccaagggacagtc-tcaggtagacagttt 233
            ||||||||||||||| ||||  ||||||||||||||||| |||||||||||||||
Sbjct: 2282 tctaaccttgtgtcaggacctacgggccaagggacagtcttcaggtagacagttt 2336

---

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125837 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 125778

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 125777 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggagggcgaaga 125718

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| |||| |       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 125717 aggcctccttgcgggggggcccgagccatcagtgagataccactctggaagagctagaat 125658

                                                                     
Query: 181    tctaaccttgtgtcag-acccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||||||| |||  |||||||||||||||||||||||||||||||||
Sbjct: 125657 tctaaccttgtgtcagaacctacgggccaagggacagtctcaggtagacagtttc 125603



 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109085 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 109144

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 109145 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggagggcgaaga 109204

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| |||| |       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 109205 aggcctccttgcgggggggcccgagccatcagtgagataccactctggaagagctagaat 109264

                                                                     
Query: 181    tctaaccttgtgtcag-acccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||||||| |||  |||||||||||||||||||||||||||||||||
Sbjct: 109265 tctaaccttgtgtcagaacctacgggccaagggacagtctcaggtagacagtttc 109319

---

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134562 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 134503

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 134502 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggagggcgaaga 134443

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 134442 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 134383

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 134382 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 134328



 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107863 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 107922

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 107923 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggagggcgaaga 107982

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 107983 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 108042

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 108043 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 108097

---

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133651 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 133592

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133591 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 133532

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 133531 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 133472

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 133471 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 133417



 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107692 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 107751

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107752 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 107811

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 107812 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 107871

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 107872 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 107926

---

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133649 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 133590

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133589 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 133530

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 133529 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 133470

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 133469 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 133415



 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107689 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 107748

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107749 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 107808

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 107809 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 107868

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 107869 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 107923

---

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133561 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 133502

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133501 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 133442

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 133441 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 133382

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 133381 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 133327



 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107567 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 107626

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107627 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 107686

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 107687 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 107746

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 107747 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 107801

---

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134268 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 134209

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134208 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 134149

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 134148 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 134089

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 134088 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 134034



 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108358 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 108417

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108418 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 108477

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 108478 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 108537

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 108538 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 108592

---

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133999 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 133940

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133939 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 133880

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 133879 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 133820

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 133819 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 133765



 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108139 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 108198

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108199 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 108258

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 108259 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 108318

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 108319 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 108373

---

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133528 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 133469

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133468 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 133409

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 133408 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 133349

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 133348 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 133294



 Score =  353 bits (178), Expect = 2e-94
 Identities = 220/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107534 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 107593

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107594 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 107653

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 107654 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 107713

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 107714 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 107768

---

>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2883

 Score =  351 bits (177), Expect = 6e-94
 Identities = 219/234 (93%), Gaps = 1/234 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2062 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2121

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2122 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 2181

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||||||||||        || |||||||||||||||||||||||||||||||| | ||
Sbjct: 2182 aggcccccttccgggggggtccaagccatcagtgagataccactctggaagagctagaat 2241

                                                                  
Query: 181  tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagttt 233
            ||||||||||||||| ||||  ||||||||||||||||||||||||||||||||
Sbjct: 2242 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagttt 2295

---

>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11,
              complete sequence
          Length = 120228

 Score =  345 bits (174), Expect = 4e-92
 Identities = 197/207 (95%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 116743 atagacatgtctgtgaagatgcggactacctgcatctggacataaagaccctatgaagct 116684

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 116683 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaagacgaaga 116624

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 116623 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 116564

                                         
Query: 181    tctaaccttgtgtcagacccgcgggcc 207
              |||||||||||||||||||||||||||
Sbjct: 116563 tctaaccttgtgtcagacccgcgggcc 116537



 Score =  230 bits (116), Expect = 2e-57
 Identities = 143/154 (92%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                          
Query: 85     gggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccnnnnnnncccga 144
              ||||||||||||||||||||||||||||||||||||||||||||||||       |||||
Sbjct: 116541 gggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccgggggggcccga 116482

                                                                          
Query: 145    gccatcagtgagataccactctggaagagctcggattctaaccttgtgtcag----accc 200
              ||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||
Sbjct: 116481 gccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacccaccc 116422

                                                
Query: 201    gcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||||||||||||||||||||||
Sbjct: 116421 gcgggccaagggacagtctcaggtagacagtttc 116388

---

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score =  345 bits (174), Expect = 4e-92
 Identities = 219/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 137474 atagacatgtctgtgaagatgcggactacccgcacctggacagaaagaccctatgaagct 137415

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 137414 tcactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 137355

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 137354 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 137295

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 137294 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 137240



 Score =  345 bits (174), Expect = 4e-92
 Identities = 219/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 111623 atagacatgtctgtgaagatgcggactacccgcacctggacagaaagaccctatgaagct 111682

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 111683 tcactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 111742

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 111743 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 111802

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 111803 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 111857

---

>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
             chromosome 10, complete sequence
          Length = 134933

 Score =  345 bits (174), Expect = 4e-92
 Identities = 197/207 (95%)
 Strand = Plus / Minus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 56515 atagacatgtctgtgaagatgcggactacctgcatctggacataaagaccctatgaagct 56456

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 56455 ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaagacgaaga 56396

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 56395 aggcccccttccgggggggcccgagccatcagtgagataccactctggaagagctcggat 56336

                                        
Query: 181   tctaaccttgtgtcagacccgcgggcc 207
             |||||||||||||||||||||||||||
Sbjct: 56335 tctaaccttgtgtcagacccgcgggcc 56309



 Score =  230 bits (116), Expect = 2e-57
 Identities = 143/154 (92%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                         
Query: 85    gggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccnnnnnnncccga 144
             ||||||||||||||||||||||||||||||||||||||||||||||||       |||||
Sbjct: 56313 gggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttccgggggggcccga 56254

                                                                         
Query: 145   gccatcagtgagataccactctggaagagctcggattctaaccttgtgtcag----accc 200
             ||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||
Sbjct: 56253 gccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacccaccc 56194

                                               
Query: 201   gcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||||||||||||||||||||||
Sbjct: 56193 gcgggccaagggacagtctcaggtagacagtttc 56160

---

>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2902

 Score =  345 bits (174), Expect = 4e-92
 Identities = 219/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2080 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2139

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2140 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 2199

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||||||||||        || |||||||||||||||||||||||||||||||| | ||
Sbjct: 2200 aggcccccttccgggggggtccaagccatcagtgagataccactctggaagagctagaat 2259

                                                                   
Query: 181  tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
            ||||||||||| ||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 2260 tctaaccttgtttcaggacctacgggccaagggacagtctcaggtagacagtttc 2314

---

>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes
          Length = 3166

 Score =  345 bits (174), Expect = 4e-92
 Identities = 219/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2124 atagacatgtctgtgaagatgcggactacctgcacctagacagaaagaccctatgaagct 2183

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2184 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 2243

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 2244 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 2303

                                                                   
Query: 181  tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
            ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 2304 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 2358

---

>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene
          Length = 2811

 Score =  345 bits (174), Expect = 4e-92
 Identities = 219/235 (93%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2031 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2090

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2091 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggagggcgaaga 2150

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||| ||||||       |||||||| ||||||||||||||||||||||||||| | ||
Sbjct: 2151 aggcctccttccgggggggcccgagccgtcagtgagataccactctggaagagctagaat 2210

                                                                   
Query: 181  tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
            ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 2211 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 2265

---

>emb|AJ005357.1|ATA005357 Aesculus turbinata microsatellite DNA, locus AT3D6
          Length = 744

 Score =  341 bits (172), Expect = 6e-91
 Identities = 219/236 (92%), Gaps = 2/236 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37  atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 96

                                                                       
Query: 61  ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
           | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 97  tcactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 156

                                                                       
Query: 121 aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
           ||||| ||||||       |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 157 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaat 216

                                                                   
Query: 181 tctaaccttgtgtcagaccc--gcgggccaagggacagtctcaggtagacagtttc 234
           ||||||||||||||||  ||   |||||||||||||||||||||||||||||||||
Sbjct: 217 tctaaccttgtgtcaggacctaacgggccaagggacagtctcaggtagacagtttc 272

---

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  339 bits (171), Expect = 2e-90
 Identities = 220/236 (93%), Gaps = 2/236 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134908 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 134849

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134848 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 134789

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 134788 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 134729

                                                                      
Query: 181    tctaaccttgtgtca-gacccgcgg-gccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  ||| ||||||||||||||||||||||||||||||
Sbjct: 134728 tctaaccttgtgtcaggacctacggtgccaagggacagtctcaggtagacagtttc 134673



 Score =  339 bits (171), Expect = 2e-90
 Identities = 220/236 (93%), Gaps = 2/236 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108649 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 108708

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108709 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 108768

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||       |||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 108769 aggcctccttccgggggggcccgagccatcagtgagataccactctggaagggctagaat 108828

                                                                      
Query: 181    tctaaccttgtgtca-gacccgcgg-gccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| ||||  ||| ||||||||||||||||||||||||||||||
Sbjct: 108829 tctaaccttgtgtcaggacctacggtgccaagggacagtctcaggtagacagtttc 108884

---

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score =  337 bits (170), Expect = 9e-90
 Identities = 218/235 (92%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130745 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 130686

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 130685 tcactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 130626

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||        ||||||||||||||||||||||||||||||||||| | ||
Sbjct: 130625 aggcctccttccgggggggtccgagccatcagtgagataccactctggaagagctagaat 130566

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| |||   |||||||||||||||||||||||||||||||||
Sbjct: 130565 tctaaccttgtgtcaggacgtacgggccaagggacagtctcaggtagacagtttc 130511



 Score =  337 bits (170), Expect = 9e-90
 Identities = 218/235 (92%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106133 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 106192

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 106193 tcactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 106252

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||        ||||||||||||||||||||||||||||||||||| | ||
Sbjct: 106253 aggcctccttccgggggggtccgagccatcagtgagataccactctggaagagctagaat 106312

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| |||   |||||||||||||||||||||||||||||||||
Sbjct: 106313 tctaaccttgtgtcaggacgtacgggccaagggacagtctcaggtagacagtttc 106367

---

>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2913

 Score =  337 bits (170), Expect = 9e-90
 Identities = 219/235 (93%), Gaps = 2/235 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2093 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2152

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2153 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 2212

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||||||||||        || |||||||||||||||||||||||||||||||| | ||
Sbjct: 2213 aggcccccttccgggggggtccaagccatcagtgagataccactctggaagagctagaat 2272

                                                                   
Query: 181  tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
            ||||||||||||||| ||||  |||||||||||||||||||| ||||||||||||
Sbjct: 2273 tctaaccttgtgtcaggacctacgggccaagggacagtctca-gtagacagtttc 2326

---

>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast
            gene for chloroplast product
          Length = 2873

 Score =  337 bits (170), Expect = 9e-90
 Identities = 218/235 (92%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2051 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2110

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2111 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 2170

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||||||||||        || |||||||||||||||||||||||||||||||| | ||
Sbjct: 2171 aggcccccttccgggggggtccaagccatcagtgagataccactctggaagagctagaat 2230

                                                                   
Query: 181  tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
            ||||||||||||||| ||||  ||||||||||||||||||||| | |||||||||
Sbjct: 2231 tctaaccttgtgtcaggacctacgggccaagggacagtctcagttggacagtttc 2285

---

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score =  337 bits (170), Expect = 9e-90
 Identities = 218/235 (92%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130738 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 130679

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 130678 tcactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 130619

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||        ||||||||||||||||||||||||||||||||||| | ||
Sbjct: 130618 aggcctccttccgggggggtccgagccatcagtgagataccactctggaagagctagaat 130559

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| |||   |||||||||||||||||||||||||||||||||
Sbjct: 130558 tctaaccttgtgtcaggacgtacgggccaagggacagtctcaggtagacagtttc 130504



 Score =  337 bits (170), Expect = 9e-90
 Identities = 218/235 (92%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106131 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 106190

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 106191 tcactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 106250

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||        ||||||||||||||||||||||||||||||||||| | ||
Sbjct: 106251 aggcctccttccgggggggtccgagccatcagtgagataccactctggaagagctagaat 106310

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| |||   |||||||||||||||||||||||||||||||||
Sbjct: 106311 tctaaccttgtgtcaggacgtacgggccaagggacagtctcaggtagacagtttc 106365

---

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score =  331 bits (167), Expect = 6e-88
 Identities = 219/236 (92%), Gaps = 2/236 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129637 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 129578

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129577 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 129518

                                                                          
Query: 121    aggcccccttcc-nnnnnnncccgagccatcagtgagataccactctggaagagctcgga 179
              ||||| ||||||         ||||||||||||||||||||||||||||||||||| | |
Sbjct: 129517 aggcctccttccggggggggtccgagccatcagtgagataccactctggaagagctagaa 129458

                                                                      
Query: 180    ttctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||||||| |||   |||||||||||||||||||||||||||||||||
Sbjct: 129457 ttctaaccttgtgtcaggacgtacgggccaagggacagtctcaggtagacagtttc 129402



 Score =  331 bits (167), Expect = 6e-88
 Identities = 219/236 (92%), Gaps = 2/236 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104998 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 105057

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105058 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 105117

                                                                          
Query: 121    aggcccccttcc-nnnnnnncccgagccatcagtgagataccactctggaagagctcgga 179
              ||||| ||||||         ||||||||||||||||||||||||||||||||||| | |
Sbjct: 105118 aggcctccttccggggggggtccgagccatcagtgagataccactctggaagagctagaa 105177

                                                                      
Query: 180    ttctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||||||| |||   |||||||||||||||||||||||||||||||||
Sbjct: 105178 ttctaaccttgtgtcaggacgtacgggccaagggacagtctcaggtagacagtttc 105233

---

>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S
            ribosomal RNA genes, complete sequence; chloroplast genes
            for chloroplast products
          Length = 5157

 Score =  331 bits (167), Expect = 6e-88
 Identities = 212/228 (92%), Gaps = 1/228 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3810 tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgt 3869

                                                                        
Query: 68   tccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccc 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3870 tccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccc 3929

                                                                        
Query: 128  cttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaacc 187
            |||||       |||||||| ||||||||||||||||||||||| ||  | |||||||||
Sbjct: 3930 cttccgggggggcccgagccgtcagtgagataccactctggaagggcaagaattctaacc 3989

                                                            
Query: 188  ttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
            |||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 3990 ttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 4037

---

>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2894

 Score =  331 bits (167), Expect = 6e-88
 Identities = 220/238 (92%), Gaps = 4/238 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2068 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2127

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2128 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 2187

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||||||||||        || |||||||||||||||||||||||||||||||| | ||
Sbjct: 2188 aggcccccttccgggggggtccaagccatcagtgagataccactctggaagagctagaat 2247

                                                                      
Query: 181  tctaac---cttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
            ||||||   ||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 2248 tctaaccctcttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 2305

---

>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA
            genes, complete sequence; chloroplast
          Length = 3069

 Score =  321 bits (162), Expect = 5e-85
 Identities = 217/235 (92%), Gaps = 2/235 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2046 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2105

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            | |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 2106 tcactgttccctgggattggctttgggcctttcctgcg-agcttaggtggagggcgaaga 2164

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             |||||||||||       || ||||| ||||||||||||||||||||||||||| | ||
Sbjct: 2165 tggcccccttccgggggggcctgagccgtcagtgagataccactctggaagagctagaat 2224

                                                                   
Query: 181  tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
            ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 2225 tctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 2279

---

>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3033

 Score =  321 bits (162), Expect = 5e-85
 Identities = 216/235 (91%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2100

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||
Sbjct: 2101 ttactgttccctgggattggctttgggctcttcttgcgcagcttaggtggaaggcgaaga 2160

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||||||||||       | |||||||||||||| |||||||||| |||||||| | ||
Sbjct: 2161 aggcccccttccgggggggctcgagccatcagtgaaataccactctagaagagctagaat 2220

                                                                   
Query: 181  tctaaccttgtgtc-agacccgcgggccaagggacagtctcaggtagacagtttc 234
            |||||||||||||| ||||   |||||||||||||||||||||||||||||||||
Sbjct: 2221 tctaaccttgtgtcaagacttacgggccaagggacagtctcaggtagacagtttc 2275

---

>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score =  321 bits (162), Expect = 5e-85
 Identities = 216/235 (91%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128499 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 128440

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 128439 tcactgttccctgggattggctttgggcttttcctgcgcagcttaggtggagggcgaaga 128380

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||        ||||||||||||||||||||||||||||||||||| | ||
Sbjct: 128379 aggcctccttccgggggggtccgagccatcagtgagataccactctggaagagctagaat 128320

                                                                     
Query: 181    tctaaccttgtgtcag-acccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||| ||| |||  ||| |||||||||||||||||||||||||||||
Sbjct: 128319 tctaaccttgtgccagaacctacggaccaagggacagtctcaggtagacagtttc 128265



 Score =  321 bits (162), Expect = 5e-85
 Identities = 216/235 (91%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103957 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 104016

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 104017 tcactgttccctgggattggctttgggcttttcctgcgcagcttaggtggagggcgaaga 104076

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| ||||||        ||||||||||||||||||||||||||||||||||| | ||
Sbjct: 104077 aggcctccttccgggggggtccgagccatcagtgagataccactctggaagagctagaat 104136

                                                                     
Query: 181    tctaaccttgtgtcag-acccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||| ||| |||  ||| |||||||||||||||||||||||||||||
Sbjct: 104137 tctaaccttgtgccagaacctacggaccaagggacagtctcaggtagacagtttc 104191

---

>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 8235

 Score =  313 bits (158), Expect = 1e-82
 Identities = 215/235 (91%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5929 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 5988

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5989 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 6048

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||| |||||        | |||||||||||||| |||||||||| |||||||| | ||
Sbjct: 6049 aggcctccttctgggggggctcgagccatcagtgaaataccactctagaagagctagaat 6108

                                                                   
Query: 181  tctaaccttgtgtc-agacccgcgggccaagggacagtctcaggtagacagtttc 234
            |||||||||||||| ||||   ||||| |||||||||||||||||||||||||||
Sbjct: 6109 tctaaccttgtgtcaagacttacgggctaagggacagtctcaggtagacagtttc 6163

---

>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence
          Length = 2819

 Score =  313 bits (158), Expect = 1e-82
 Identities = 215/235 (91%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2039 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2098

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2099 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 2158

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||| |||||        | |||||||||||||| |||||||||| |||||||| | ||
Sbjct: 2159 aggcctccttctgggggggctcgagccatcagtgaaataccactctagaagagctagaat 2218

                                                                   
Query: 181  tctaaccttgtgtc-agacccgcgggccaagggacagtctcaggtagacagtttc 234
            |||||||||||||| ||||   ||||| |||||||||||||||||||||||||||
Sbjct: 2219 tctaaccttgtgtcaagacttacgggctaagggacagtctcaggtagacagtttc 2273

---

>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome
          Length = 161162

 Score =  313 bits (158), Expect = 1e-82
 Identities = 215/235 (91%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149206 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 149147

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 149146 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 149087

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| |||||        | |||||||||||||| |||||||||| |||||||| | ||
Sbjct: 149086 aggcctccttctgggggggctcgagccatcagtgaaataccactctagaagagctagaat 149027

                                                                     
Query: 181    tctaaccttgtgtc-agacccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||||| ||||   ||||| |||||||||||||||||||||||||||
Sbjct: 149026 tctaaccttgtgtcaagacttacgggctaagggacagtctcaggtagacagtttc 148972



 Score =  313 bits (158), Expect = 1e-82
 Identities = 215/235 (91%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119460 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 119519

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 119520 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 119579

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| |||||        | |||||||||||||| |||||||||| |||||||| | ||
Sbjct: 119580 aggcctccttctgggggggctcgagccatcagtgaaataccactctagaagagctagaat 119639

                                                                     
Query: 181    tctaaccttgtgtc-agacccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||||| ||||   ||||| |||||||||||||||||||||||||||
Sbjct: 119640 tctaaccttgtgtcaagacttacgggctaagggacagtctcaggtagacagtttc 119694

---

>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete
            sequence
          Length = 3503

 Score =  313 bits (158), Expect = 1e-82
 Identities = 215/235 (91%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2039 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2098

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2099 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 2158

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||| |||||        | |||||||||||||| |||||||||| |||||||| | ||
Sbjct: 2159 aggcctccttctgggggggctcgagccatcagtgaaataccactctagaagagctagaat 2218

                                                                   
Query: 181  tctaaccttgtgtc-agacccgcgggccaagggacagtctcaggtagacagtttc 234
            |||||||||||||| ||||   ||||| |||||||||||||||||||||||||||
Sbjct: 2219 tctaaccttgtgtcaagacttacgggctaagggacagtctcaggtagacagtttc 2273

---

>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score =  311 bits (157), Expect = 5e-82
 Identities = 214/234 (91%), Gaps = 1/234 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116110 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 116051

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||
Sbjct: 116050 ttactgttccctgggattggctttgggctcttcttgcgcagcttaggtggaaggcgaaga 115991

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       | |||||||||||||| |||||||||| |||||||| | ||
Sbjct: 115990 aggcccccttccgggggggctcgagccatcagtgaaataccactctagaagagctagaat 115931

                                                                    
Query: 181    tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||||||||||| |    |||||||||||||||||||||||||||||||||
Sbjct: 115930 tctaaccttgtgtca-atttacgggccaagggacagtctcaggtagacagtttc 115878



 Score =  311 bits (157), Expect = 5e-82
 Identities = 214/234 (91%), Gaps = 1/234 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91992 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 92051

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||
Sbjct: 92052 ttactgttccctgggattggctttgggctcttcttgcgcagcttaggtggaaggcgaaga 92111

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       | |||||||||||||| |||||||||| |||||||| | ||
Sbjct: 92112 aggcccccttccgggggggctcgagccatcagtgaaataccactctagaagagctagaat 92171

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||||||||||| |    |||||||||||||||||||||||||||||||||
Sbjct: 92172 tctaaccttgtgtca-atttacgggccaagggacagtctcaggtagacagtttc 92224

---

>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score =  305 bits (154), Expect = 3e-80
 Identities = 214/235 (91%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88283 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 88342

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||||||||| |||||||   ||| ||||||||||||||||| ||||||||
Sbjct: 88343 ttactgttccctgggattgtctttgggttcttcttgcgcagcttaggtggagggcgaaga 88402

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       || |||||| |||||||||||||||||||||||||| | ||
Sbjct: 88403 aggcccccttccgggggggcctgagccaccagtgagataccactctggaagagctagaat 88462

                                                                    
Query: 181   tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
             |||||||||| |||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 88463 tctaaccttgcgtcaggacctacgggccaagggacagtctcaggtagacagtttc 88517

---

>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome
          Length = 154373

 Score =  305 bits (154), Expect = 3e-80
 Identities = 214/235 (91%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144509 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 144450

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||| ||
Sbjct: 144449 ttactgttccctgggattggctttgggctcttcttgcgcagcttaggtggaaggcgagga 144390

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       | |||||||||||||| |||||||||| |||||||| | ||
Sbjct: 144389 aggcccccttccgggggggctcgagccatcagtgaaataccactctagaagagctagaat 144330

                                                                     
Query: 181    tctaaccttgtgtc-agacccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||||| ||||   |||||||||||||||||| ||||||||||||||
Sbjct: 144329 tctaaccttgtgtcaagacttacgggccaagggacagtcttaggtagacagtttc 144275



 Score =  305 bits (154), Expect = 3e-80
 Identities = 214/235 (91%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113953 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 114012

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||| ||
Sbjct: 114013 ttactgttccctgggattggctttgggctcttcttgcgcagcttaggtggaaggcgagga 114072

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||||||||       | |||||||||||||| |||||||||| |||||||| | ||
Sbjct: 114073 aggcccccttccgggggggctcgagccatcagtgaaataccactctagaagagctagaat 114132

                                                                     
Query: 181    tctaaccttgtgtc-agacccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||||| ||||   |||||||||||||||||| ||||||||||||||
Sbjct: 114133 tctaaccttgtgtcaagacttacgggccaagggacagtcttaggtagacagtttc 114187

---

>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score =  305 bits (154), Expect = 3e-80
 Identities = 214/235 (91%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90371 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 90430

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||||||||| |||||||   ||| ||||||||||||||||| ||||||||
Sbjct: 90431 ttactgttccctgggattgtctttgggttcttcttgcgcagcttaggtggagggcgaaga 90490

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||||||||       || |||||| |||||||||||||||||||||||||| | ||
Sbjct: 90491 aggcccccttccgggggggcctgagccaccagtgagataccactctggaagagctagaat 90550

                                                                    
Query: 181   tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
             |||||||||| |||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 90551 tctaaccttgcgtcaggacctacgggccaagggacagtctcaggtagacagtttc 90605

---

>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon
          Length = 7920

 Score =  303 bits (153), Expect = 1e-79
 Identities = 214/235 (91%), Gaps = 5/235 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6537 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 6596

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            | |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 6597 tcactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcaaaga 6656

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||||||||||       | |||||||||||||||||||||||||||||||||| | ||
Sbjct: 6657 aggcccccttccgggggggctcgagccatcagtgagataccactctggaagagctagaat 6716

                                                                   
Query: 181  tctaaccttgtgtc-agacccgcgggccaagggacagtctcaggtagacagtttc 234
            |||||||||||| | |||    | | |||||||||||||||||||||||||||||
Sbjct: 6717 tctaaccttgtgccaaga----cagaccaagggacagtctcaggtagacagtttc 6767

---

>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA
          Length = 7920

 Score =  303 bits (153), Expect = 1e-79
 Identities = 214/235 (91%), Gaps = 5/235 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6537 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 6596

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            | |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 6597 tcactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcaaaga 6656

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||||||||||       | |||||||||||||||||||||||||||||||||| | ||
Sbjct: 6657 aggcccccttccgggggggctcgagccatcagtgagataccactctggaagagctagaat 6716

                                                                   
Query: 181  tctaaccttgtgtc-agacccgcgggccaagggacagtctcaggtagacagtttc 234
            |||||||||||| | |||    | | |||||||||||||||||||||||||||||
Sbjct: 6717 tctaaccttgtgccaaga----cagaccaagggacagtctcaggtagacagtttc 6767

---

>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence
          Length = 163935

 Score =  299 bits (151), Expect = 2e-78
 Identities = 209/228 (91%), Gaps = 2/228 (0%)
 Strand = Plus / Minus

                                                                          
Query: 8      tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 140842 tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgt 140783

                                                                          
Query: 68     tccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccc 127
              |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 140782 tccctgggattgtctttgggcccttcctgcgcagcttaggtggaaggcgaagaaggcctc 140723

                                                                          
Query: 128    cttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaacc 187
              |||||       || ||||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 140722 cttccgggggggcctgagccatcagtgagataccactctggaagggctagaattctaacc 140663

                                                              
Query: 188    ttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
               ||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 140662 -tgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 140616



 Score =  299 bits (151), Expect = 2e-78
 Identities = 209/228 (91%), Gaps = 2/228 (0%)
 Strand = Plus / Plus

                                                                          
Query: 8      tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 112486 tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgt 112545

                                                                          
Query: 68     tccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccc 127
              |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 112546 tccctgggattgtctttgggcccttcctgcgcagcttaggtggaaggcgaagaaggcctc 112605

                                                                          
Query: 128    cttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggattctaacc 187
              |||||       || ||||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 112606 cttccgggggggcctgagccatcagtgagataccactctggaagggctagaattctaacc 112665

                                                              
Query: 188    ttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
               ||||||| ||||  |||||||||||||||||||||||||||||||||
Sbjct: 112666 -tgtgtcaggacctacgggccaagggacagtctcaggtagacagtttc 112712

---

>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score =  297 bits (150), Expect = 8e-78
 Identities = 213/235 (90%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129837 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 129778

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | |||||| ||||||||||||||||||| |||||||||||||||||||||| ||| ||||
Sbjct: 129777 tcactgtttcctgggattggctttgggcttttcctgcgcagcttaggtggagggcaaaga 129718

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| |||||        || ||||||||||||||||||||||||||||||||| | ||
Sbjct: 129717 aggcctccttctgggggggccagagccatcagtgagataccactctggaagagctagaat 129658

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||| || ||||  |||||| ||||||||||||||||||||||||||
Sbjct: 129657 tctaaccttgtgccaggacctacgggccgagggacagtctcaggtagacagtttc 129603



 Score =  297 bits (150), Expect = 8e-78
 Identities = 213/235 (90%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105557 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 105616

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | |||||| ||||||||||||||||||| |||||||||||||||||||||| ||| ||||
Sbjct: 105617 tcactgtttcctgggattggctttgggcttttcctgcgcagcttaggtggagggcaaaga 105676

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||| |||||        || ||||||||||||||||||||||||||||||||| | ||
Sbjct: 105677 aggcctccttctgggggggccagagccatcagtgagataccactctggaagagctagaat 105736

                                                                     
Query: 181    tctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||| || ||||  |||||| ||||||||||||||||||||||||||
Sbjct: 105737 tctaaccttgtgccaggacctacgggccgagggacagtctcaggtagacagtttc 105791

---

>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence
          Length = 110949

 Score =  291 bits (147), Expect = 5e-76
 Identities = 211/234 (90%), Gaps = 3/234 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6251 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 6310

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            | ||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct: 6311 tcactgttccctgggattggctttgagcttttcctgcgcagcttaggtggaaggcaaaga 6370

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||||| ||||||       | |||||||||||||||||||||||||||||||||| | ||
Sbjct: 6371 aggcctccttccgggggggctcgagccatcagtgagataccactctggaagagctagaat 6430

                                                                  
Query: 181  tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
            |||||||||||| |||     | | |||||||||||||||||||||||||||||
Sbjct: 6431 tctaaccttgtgccag---tacagaccaagggacagtctcaggtagacagtttc 6481

---

>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score =  291 bits (147), Expect = 5e-76
 Identities = 211/234 (90%), Gaps = 3/234 (1%)
 Strand = Plus / Minus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21674 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 21615

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             | ||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct: 21614 tcactgttccctgggattggctttgagcttttcctgcgcagcttaggtggaaggcaaaga 21555

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||| ||||||       | |||||||||||||||||||||||||||||||||| | ||
Sbjct: 21554 aggcctccttccgggggggctcgagccatcagtgagataccactctggaagagctagaat 21495

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             |||||||||||| |||     | | |||||||||||||||||||||||||||||
Sbjct: 21494 tctaaccttgtgccag---tacagaccaagggacagtctcaggtagacagtttc 21444

---

>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3020

 Score =  291 bits (147), Expect = 5e-76
 Identities = 211/234 (90%), Gaps = 3/234 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2039 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2098

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||
Sbjct: 2099 ttactgttccctgggattggctttgggctcttcttgcgcagcttaggtggaaggcgaaga 2158

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            |||||| |||||       | |||||||||||||| |||||||||| |||||||| | ||
Sbjct: 2159 aggccctcttccgggagggctcgagccatcagtgaaataccactctagaagagctagaat 2218

                                                                  
Query: 181  tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
            ||||||||||| |||      |||||||||||||||||||||||||||||||||
Sbjct: 2219 tctaaccttgtatca---atacgggccaagggacagtctcaggtagacagtttc 2269

---

>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA
            intergenic spacer region and 23S ribosomal RNA gene,
            partial sequences
          Length = 3735

 Score =  281 bits (142), Expect = 5e-73
 Identities = 162/171 (94%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3554 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 3613

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3614 tcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 3673

                                                               
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaag 171
            ||||| ||||||       ||||||||||||||||||||||||||||||||
Sbjct: 3674 aggcctccttccgggggggcccgagccatcagtgagataccactctggaag 3724

---

>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome
          Length = 430597

 Score =  276 bits (139), Expect = 3e-71
 Identities = 205/228 (89%), Gaps = 1/228 (0%)
 Strand = Plus / Plus

                                                                          
Query: 2      tagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctt 61
              |||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||
Sbjct: 425002 tagacatgtctgtgaagatgcggactacctccacctggacagaaagaccgattgaagctt 425061

                                                                          
Query: 62     tactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaa 121
               |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 425062 aactgttccctgggattggctttgggcttttcctgcgcagcttaggtggagggcgaagaa 425121

                                                                          
Query: 122    ggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggatt 181
              |||| ||||||        ||||||||||||||||||||||||||| ||||||| | |||
Sbjct: 425122 ggcctccttccggggggggccgagccatcagtgagataccactctgaaagagctagaatt 425181

                                                              
Query: 182    ctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagac 228
              ||||||||||| || ||||  |||||||||||||||||||||||||||
Sbjct: 425182 ctaaccttgtgccaggacctacgggccaagggacagtctcaggtagac 425229



 Score =  276 bits (139), Expect = 3e-71
 Identities = 205/228 (89%), Gaps = 1/228 (0%)
 Strand = Plus / Plus

                                                                         
Query: 2     tagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctt 61
             |||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||
Sbjct: 74252 tagacatgtctgtgaagatgcggactacctccacctggacagaaagaccgattgaagctt 74311

                                                                         
Query: 62    tactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaa 121
              |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 74312 aactgttccctgggattggctttgggcttttcctgcgcagcttaggtggagggcgaagaa 74371

                                                                         
Query: 122   ggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggatt 181
             |||| ||||||        ||||||||||||||||||||||||||| ||||||| | |||
Sbjct: 74372 ggcctccttccggggggggccgagccatcagtgagataccactctgaaagagctagaatt 74431

                                                             
Query: 182   ctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagac 228
             ||||||||||| || ||||  |||||||||||||||||||||||||||
Sbjct: 74432 ctaaccttgtgccaggacctacgggccaagggacagtctcaggtagac 74479

---

>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome
          Length = 144170

 Score =  266 bits (134), Expect = 3e-68
 Identities = 208/234 (88%), Gaps = 2/234 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 137225 atagacatgtctgtgaagatgcggactacccgcacccggacagaaagaccctatgaagct 137166

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 137165 ttactgttccctgagattggctttgggcccttcctgcgcagcttaggtggaaggcgaaga 137106

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||| ||||||||       | |||||||||||||| |||||||||| | |||||    ||
Sbjct: 137105 aggtccccttccgggggggctcgagccatcagtgaaataccactctaggagagccaaaat 137046

                                                                    
Query: 181    tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||| ||| |||  || | |||||||||||||||||||||||||||||||||
Sbjct: 137045 tctaactttgcgtc--actcacgggccaagggacagtctcaggtagacagtttc 136994



 Score =  266 bits (134), Expect = 3e-68
 Identities = 208/234 (88%), Gaps = 2/234 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 84652 atagacatgtctgtgaagatgcggactacccgcacccggacagaaagaccctatgaagct 84711

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 84712 ttactgttccctgagattggctttgggcccttcctgcgcagcttaggtggaaggcgaaga 84771

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||| ||||||||       | |||||||||||||| |||||||||| | |||||    ||
Sbjct: 84772 aggtccccttccgggggggctcgagccatcagtgaaataccactctaggagagccaaaat 84831

                                                                   
Query: 181   tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
             |||||| ||| |||  || | |||||||||||||||||||||||||||||||||
Sbjct: 84832 tctaactttgcgtc--actcacgggccaagggacagtctcaggtagacagtttc 84883

---

>emb|X69917.1|BCMIDDLYB B.corolliflora middly repeated DNA
          Length = 258

 Score =  238 bits (120), Expect = 6e-60
 Identities = 123/124 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 113

                                                                       
Query: 61  ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 112 ttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaaga 53

               
Query: 121 aggc 124
           ||||
Sbjct: 52  aggc 49



 Score = 71.9 bits (36), Expect = 8e-10
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                               
Query: 140 cccgagccatcagtgagataccactctggaagagct 175
           ||||||||||||||||||||||||||||||||||||
Sbjct: 38  cccgagccatcagtgagataccactctggaagagct 3

---

>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome
          Length = 138829

 Score =  234 bits (118), Expect = 1e-58
 Identities = 205/235 (87%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 126408 atagacatgtctgtgaagatgcggactacccgcacctggacagaaagaccctatgaagct 126349

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||| ||||||||||||||   ||||||||||||||||||| |||||||||
Sbjct: 126348 tcactgttccctgagattggctttgggctcctcctgcgcagcttaggtgggaggcgaaga 126289

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||||||| ||||         |||||||||||||| |||||||||| || | ||| | ||
Sbjct: 126288 aggcccctttccgggggggttcgagccatcagtgaaataccactctagaggggctagaat 126229

                                                                     
Query: 181    tctaaccttgtgtc-agacccgcgggccaagggacagtctcaggtagacagtttc 234
              ||||||| || ||| ||||   |||||||||||||||| ||||||||||||||||
Sbjct: 126228 tctaaccctgcgtcaagactgacgggccaagggacagtttcaggtagacagtttc 126174



 Score =  234 bits (118), Expect = 1e-58
 Identities = 205/235 (87%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 97039 atagacatgtctgtgaagatgcggactacccgcacctggacagaaagaccctatgaagct 97098

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             | ||||||||||| ||||||||||||||   ||||||||||||||||||| |||||||||
Sbjct: 97099 tcactgttccctgagattggctttgggctcctcctgcgcagcttaggtgggaggcgaaga 97158

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
             ||||||| ||||         |||||||||||||| |||||||||| || | ||| | ||
Sbjct: 97159 aggcccctttccgggggggttcgagccatcagtgaaataccactctagaggggctagaat 97218

                                                                    
Query: 181   tctaaccttgtgtc-agacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||| || ||| ||||   |||||||||||||||| ||||||||||||||||
Sbjct: 97219 tctaaccctgcgtcaagactgacgggccaagggacagtttcaggtagacagtttc 97273

---

>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2989

 Score =  228 bits (115), Expect = 6e-57
 Identities = 204/234 (87%), Gaps = 4/234 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2045 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2104

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            ||||||||||||||||||||||| |||   ||| ||||||||||||||||||||| ||||
Sbjct: 2105 ttactgttccctgggattggcttcgggttcttcttgcgcagcttaggtggaaggcaaaga 2164

                                                                        
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
            ||| |||  |||       |  ||||| ||||||| ||||||||||||||||||| | ||
Sbjct: 2165 aggtccc--tcccggggggctagagccgtcagtgaaataccactctggaagagctagaat 2222

                                                                  
Query: 181  tctaaccttgtgtcagacccgcgggccaagggacagtctcaggtagacagtttc 234
            |||||||| | |||  |  | |||||||||| ||||||||||||||||||||||
Sbjct: 2223 tctaacctcgcgtc--attcacgggccaaggaacagtctcaggtagacagtttc 2274

---

>dbj|AK060185.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-C09, full
           insert sequence
          Length = 886

 Score =  226 bits (114), Expect = 2e-56
 Identities = 128/135 (94%)
 Strand = Plus / Plus

                                                                       
Query: 100 agcttaggtggaaggcgaagaaggcccccttccnnnnnnncccgagccatcagtgagata 159
           |||||||||||||||||||||||||||||||||       ||||||||||||||||||||
Sbjct: 2   agcttaggtggaaggcgaagaaggcccccttccgggggggcccgagccatcagtgagata 61

                                                                       
Query: 160 ccactctggaagagctcggattctaaccttgtgtcagacccgcgggccaagggacagtct 219
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  ccactctggaagagctcggattctaaccttgtgtcagacccgcgggccaagggacagtct 121

                          
Query: 220 caggtagacagtttc 234
           |||||||||||||||
Sbjct: 122 caggtagacagtttc 136

---

>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome
          Length = 70028

 Score =  222 bits (112), Expect = 4e-55
 Identities = 121/124 (97%)
 Strand = Plus / Minus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50652 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 50593

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             |||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||
Sbjct: 50592 ttactgttccctgggattgagtttgggcttttcctgcgcagcttaggtggaaggcgaaga 50533

                 
Query: 121   aggc 124
             ||||
Sbjct: 50532 aggc 50529



 Score =  222 bits (112), Expect = 4e-55
 Identities = 121/124 (97%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39176 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 39235

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             |||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||
Sbjct: 39236 ttactgttccctgggattgagtttgggcttttcctgcgcagcttaggtggaaggcgaaga 39295

                 
Query: 121   aggc 124
             ||||
Sbjct: 39296 aggc 39299



 Score =  127 bits (64), Expect = 2e-26
 Identities = 89/96 (92%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                         
Query: 140   cccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtca-gac 198
             |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 50522 cccgagccatcagtgagataccactctggaagagctagaattctaaccttgtgtcaggac 50463

                                                 
Query: 199   ccgcgggccaagggacagtctcaggtagacagtttc 234
             |  ||||||  |||||||||||||||||||||||||
Sbjct: 50462 ctacgggccgcgggacagtctcaggtagacagtttc 50427



 Score =  127 bits (64), Expect = 2e-26
 Identities = 89/96 (92%), Gaps = 1/96 (1%)
 Strand = Plus / Plus

                                                                         
Query: 140   cccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtca-gac 198
             |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 39306 cccgagccatcagtgagataccactctggaagagctagaattctaaccttgtgtcaggac 39365

                                                 
Query: 199   ccgcgggccaagggacagtctcaggtagacagtttc 234
             |  ||||||  |||||||||||||||||||||||||
Sbjct: 39366 ctacgggccgcgggacagtctcaggtagacagtttc 39401

---

>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes
          Length = 7395

 Score =  222 bits (112), Expect = 4e-55
 Identities = 121/124 (97%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6104 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 6163

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||
Sbjct: 6164 ttactgttccctgggattgagtttgggcttttcctgcgcagcttaggtggaaggcgaaga 6223

                
Query: 121  aggc 124
            ||||
Sbjct: 6224 aggc 6227



 Score =  127 bits (64), Expect = 2e-26
 Identities = 89/96 (92%), Gaps = 1/96 (1%)
 Strand = Plus / Plus

                                                                        
Query: 140  cccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtca-gac 198
            |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 6234 cccgagccatcagtgagataccactctggaagagctagaattctaaccttgtgtcaggac 6293

                                                
Query: 199  ccgcgggccaagggacagtctcaggtagacagtttc 234
            |  ||||||  |||||||||||||||||||||||||
Sbjct: 6294 ctacgggccgcgggacagtctcaggtagacagtttc 6329

---

>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score =  220 bits (111), Expect = 1e-54
 Identities = 123/127 (96%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114174 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 114115

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||||||||||||||||||||||  |||| ||||||||||||||||||||| ||||
Sbjct: 114114 ttactgttccctgggattggctttgggtttttcttgcgcagcttaggtggaaggcaaaga 114055

                     
Query: 121    aggcccc 127
              |||||||
Sbjct: 114054 aggcccc 114048



 Score =  220 bits (111), Expect = 1e-54
 Identities = 123/127 (96%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87946 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 88005

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             |||||||||||||||||||||||||||  |||| ||||||||||||||||||||| ||||
Sbjct: 88006 ttactgttccctgggattggctttgggtttttcttgcgcagcttaggtggaaggcaaaga 88065

                    
Query: 121   aggcccc 127
             |||||||
Sbjct: 88066 aggcccc 88072



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 78/89 (87%), Gaps = 1/89 (1%)
 Strand = Plus / Minus

                                                                          
Query: 147    catcagtgagataccactctggaagagctcggattctaaccttgtgtc-agacccgcggg 205
              ||||||||| |||||||||| |||||||| | |||||||||||||||| | |    ||||
Sbjct: 114031 catcagtgaaataccactctagaagagctagaattctaaccttgtgtcaaaatttacggg 113972

                                           
Query: 206    ccaagggacagtctcaggtagacagtttc 234
              |||||||||| ||||||||||||||||||
Sbjct: 113971 ccaagggacattctcaggtagacagtttc 113943



 Score = 81.8 bits (41), Expect = 9e-13
 Identities = 78/89 (87%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                         
Query: 147   catcagtgagataccactctggaagagctcggattctaaccttgtgtc-agacccgcggg 205
             ||||||||| |||||||||| |||||||| | |||||||||||||||| | |    ||||
Sbjct: 88089 catcagtgaaataccactctagaagagctagaattctaaccttgtgtcaaaatttacggg 88148

                                          
Query: 206   ccaagggacagtctcaggtagacagtttc 234
             |||||||||| ||||||||||||||||||
Sbjct: 88149 ccaagggacattctcaggtagacagtttc 88177

---

>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome
          Length = 150568

 Score =  218 bits (110), Expect = 6e-54
 Identities = 203/235 (86%), Gaps = 1/235 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 145950 atagacatgtctgtgaagatgcggactacccgcacctggacagaaagaccctatgaagct 146009

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              | ||||||||||| |||||| || ||||  ||| ||||||||||||||||||||| ||||
Sbjct: 146010 tcactgttccctgcgattggattcgggctcttcttgcgcagcttaggtggaaggcaaaga 146069

                                                                          
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
               ||| || ||||       || |||||||||||||||||||||||| ||||| || | ||
Sbjct: 146070 gggctcctttccggaggggcctgagccatcagtgagataccactctagaagaactagaat 146129

                                                                     
Query: 181    tctaaccttgtgtc-agacccgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||||| |||    ||| ||||| ||||||| |||||||||||||||
Sbjct: 146130 tctaaccttgtgtcaagaattacggaccaagagacagtcccaggtagacagtttc 146184



 Score =  218 bits (110), Expect = 6e-54
 Identities = 203/235 (86%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 86901 atagacatgtctgtgaagatgcggactacccgcacctggacagaaagaccctatgaagct 86842

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             | ||||||||||| |||||| || ||||  ||| ||||||||||||||||||||| ||||
Sbjct: 86841 tcactgttccctgcgattggattcgggctcttcttgcgcagcttaggtggaaggcaaaga 86782

                                                                         
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcggat 180
              ||| || ||||       || |||||||||||||||||||||||| ||||| || | ||
Sbjct: 86781 gggctcctttccggaggggcctgagccatcagtgagataccactctagaagaactagaat 86722

                                                                    
Query: 181   tctaaccttgtgtc-agacccgcgggccaagggacagtctcaggtagacagtttc 234
             |||||||||||||| |||    ||| ||||| ||||||| |||||||||||||||
Sbjct: 86721 tctaaccttgtgtcaagaattacggaccaagagacagtcccaggtagacagtttc 86667

---

>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA
            (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and
            Ile) genes
          Length = 9493

 Score =  212 bits (107), Expect = 4e-52
 Identities = 204/236 (86%), Gaps = 2/236 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4523 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 4464

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||| ||||||||||  ||||||| |||| ||||||  ||||||||  |||||  |
Sbjct: 4463 ttactgtttcctgggattgagtttgggcttttcttgcgcacgttaggtggggggcgagaa 4404

                                                                        
Query: 121  aggc-ccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcgga 179
            |||| ||| || |       || |||||||||||||||||||||||| |||| ||  | |
Sbjct: 4403 aggctccctttgcgggggggccagagccatcagtgagataccactctagaagtgccagaa 4344

                                                                    
Query: 180  ttctaaccttgtgtcag-acccgcgggccaagggacagtctcaggtagacagtttc 234
             |||||||||| ||||| |||  |||||||||||||||||||||||||||||||||
Sbjct: 4343 ctctaaccttgcgtcagaacctacgggccaagggacagtctcaggtagacagtttc 4288

---

>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 7651

 Score =  212 bits (107), Expect = 4e-52
 Identities = 113/115 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6048 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 6107

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 6108 ttactgttccctgggattgggtttgggcttttcctgcgcagcttaggtggaaggc 6162



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 77/92 (83%), Gaps = 3/92 (3%)
 Strand = Plus / Plus

                                                                        
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacccgc 202
            |||||||||||||||||||||||| ||  |||| | ||||||||||| ||||    ||  
Sbjct: 6190 gagccatcagtgagataccactcttgagaagctagaattctaaccttatgtcgtttcc-- 6247

                                            
Query: 203  gggccaagggacagtctcaggtagacagtttc 234
             ||| |||||| ||||||||||||||||||||
Sbjct: 6248 -ggctaagggaaagtctcaggtagacagtttc 6278

---

>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3257

 Score =  212 bits (107), Expect = 4e-52
 Identities = 113/115 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2015 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2074

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 2075 ttactgttccctgggattgggtttgggcttttcctgcgcagcttaggtggaaggc 2129



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaaccttgtgtc 194
            |||||||||||||||||||||||| ||  |||| | ||||||||||| ||||
Sbjct: 2157 gagccatcagtgagataccactcttgagaagctagaattctaaccttatgtc 2208

---

>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3277

 Score =  212 bits (107), Expect = 4e-52
 Identities = 113/115 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2015 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2074

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 2075 ttactgttccctgggattgggtttgggcttttcctgcgcagcttaggtggaaggc 2129



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaaccttgtgtc 194
            |||||||||||||||||||||||| ||  |||| | ||||||||||| ||||
Sbjct: 2157 gagccatcagtgagataccactcttgagaagctagaattctaaccttatgtc 2208

---

>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA
            (rrl) gene, complete sequence; chloroplast gene for
            chloroplast product
          Length = 2875

 Score =  204 bits (103), Expect = 9e-50
 Identities = 118/123 (95%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2002 atagacatgtctgtgaagatgcggactagctgcacctggacagaaagaccctatgaagct 2061

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||||||||||||||||||||||| | || |||||||||||||||| |||||||||
Sbjct: 2062 ttactgttccctgggattggctttgggcttctcttgcgcagcttaggtgggaggcgaaga 2121

               
Query: 121  agg 123
            |||
Sbjct: 2122 agg 2124



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 210  gggacagtctcaggtagacagtttc 234
            |||||||||||||||||||||||||
Sbjct: 2208 gggacagtctcaggtagacagtttc 2232

---

>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome
          Length = 131183

 Score =  204 bits (103), Expect = 9e-50
 Identities = 118/123 (95%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 123263 atagacatgtctgtgaagatgcggactagctgcacctggacagaaagaccctatgaagct 123204

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||||||||||||||||||||||| | || |||||||||||||||| |||||||||
Sbjct: 123203 ttactgttccctgggattggctttgggcttctcttgcgcagcttaggtgggaggcgaaga 123144

                 
Query: 121    agg 123
              |||
Sbjct: 123143 agg 123141



 Score =  204 bits (103), Expect = 9e-50
 Identities = 118/123 (95%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 96603 atagacatgtctgtgaagatgcggactagctgcacctggacagaaagaccctatgaagct 96662

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             |||||||||||||||||||||||||||| | || |||||||||||||||| |||||||||
Sbjct: 96663 ttactgttccctgggattggctttgggcttctcttgcgcagcttaggtgggaggcgaaga 96722

                
Query: 121   agg 123
             |||
Sbjct: 96723 agg 96725



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 210    gggacagtctcaggtagacagtttc 234
              |||||||||||||||||||||||||
Sbjct: 123057 gggacagtctcaggtagacagtttc 123033



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 210   gggacagtctcaggtagacagtttc 234
             |||||||||||||||||||||||||
Sbjct: 96809 gggacagtctcaggtagacagtttc 96833

---

>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome
          Length = 165372

 Score =  202 bits (102), Expect = 3e-49
 Identities = 117/122 (95%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2353 atagacttgtctgtgaagatgcggactacctacacctggacagaaagaccctatgaagct 2412

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||
Sbjct: 2413 ttactgttccctgggattgggtttgggcctttcttgcgcagcttaggtgggaggcgaaga 2472

              
Query: 121  ag 122
            ||
Sbjct: 2473 ag 2474

---

>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA
            gene, 23S rRNA gene (partial) and 5S rRNA gene
          Length = 6689

 Score =  196 bits (99), Expect = 2e-47
 Identities = 120/127 (94%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||||||| |||||||||| ||||||||||||||||||||||||||||||||  ||||
Sbjct: 2075 atagacatgtttgtgaagatggggactacctgcacctggacagaaagaccctattcagct 2134

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2135 tcactcttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 2194

                   
Query: 121  aggcccc 127
            || ||||
Sbjct: 2195 agccccc 2201



 Score =  111 bits (56), Expect = 1e-21
 Identities = 87/96 (90%), Gaps = 1/96 (1%)
 Strand = Plus / Plus

                                                                        
Query: 140  cccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtca-gac 198
            |||||||||||||||||||||||||||   |||||| | ||||||||||||||||| |||
Sbjct: 2215 cccgagccatcagtgagataccactcttccagagctagaattctaaccttgtgtcaggac 2274

                                                
Query: 199  ccgcgggccaagggacagtctcaggtagacagtttc 234
            |  |||||||||||||||||||||||| ||||||||
Sbjct: 2275 ctacgggccaagggacagtctcaggtaaacagtttc 2310



 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 44/44 (100%)
 Strand = Plus / Plus

                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacaga 44
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1488 atagacatgtctgtgaagatgcggactacctgcacctggacaga 1531

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  188 bits (95), Expect = 5e-45
 Identities = 95/95 (100%)
 Strand = Plus / Plus

                                                                            
Query: 140      cccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacc 199
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33580908 cccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacc 33580967

                                                   
Query: 200      cgcgggccaagggacagtctcaggtagacagtttc 234
                |||||||||||||||||||||||||||||||||||
Sbjct: 33580968 cgcgggccaagggacagtctcaggtagacagtttc 33581002

---

>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0557A01
          Length = 147201

 Score =  188 bits (95), Expect = 5e-45
 Identities = 95/95 (100%)
 Strand = Plus / Plus

                                                                          
Query: 140    cccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacc 199
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126105 cccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacc 126164

                                                 
Query: 200    cgcgggccaagggacagtctcaggtagacagtttc 234
              |||||||||||||||||||||||||||||||||||
Sbjct: 126165 cgcgggccaagggacagtctcaggtagacagtttc 126199

---

>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3349

 Score =  188 bits (95), Expect = 5e-45
 Identities = 110/115 (95%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2010 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2069

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            ||||||||||||| |||||| |||||||  ||| |||||||||||||||||||||
Sbjct: 2070 ttactgttccctgagattgggtttgggctcttcttgcgcagcttaggtggaaggc 2124



 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 76/92 (82%), Gaps = 3/92 (3%)
 Strand = Plus / Plus

                                                                        
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcagacccgc 202
            ||||||| |||||||||||||||| ||| |||| | || |||||||| |||||    | |
Sbjct: 2152 gagccattagtgagataccactcttgaatagctagaatcctaaccttatgtca---tctc 2208

                                            
Query: 203  gggccaagggacagtctcaggtagacagtttc 234
             ||| |||| | ||||||||||||||||||||
Sbjct: 2209 cggctaaggaaaagtctcaggtagacagtttc 2240

---

>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 2571

 Score =  186 bits (94), Expect = 2e-44
 Identities = 153/175 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1993 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2052

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||  ||||| ||||| |||||||  ||| ||||||||||||||||||||||  ||
Sbjct: 2053 ttactgtaacctggaattgggtttgggctcttcttgcgcagcttaggtggaaggcgttga 2112

                                                                   
Query: 121  aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagct 175
            |||   ||||||       |  |||||| ||||||||||||||||||||||||||
Sbjct: 2113 aggtatccttccggggatactggagccaacagtgagataccactctggaagagct 2167

---

>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome
          Length = 118360

 Score =  186 bits (94), Expect = 2e-44
 Identities = 153/175 (87%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113670 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 113611

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||  ||||| ||||| |||||||  ||| ||||||||||||||||||||||  ||
Sbjct: 113610 ttactgtaacctggaattgggtttgggctcttcttgcgcagcttaggtggaaggcgttga 113551

                                                                     
Query: 121    aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagct 175
              |||   ||||||       |  |||||| ||||||||||||||||||||||||||
Sbjct: 113550 aggtatccttccggggatactggagccaacagtgagataccactctggaagagct 113496



 Score =  186 bits (94), Expect = 2e-44
 Identities = 153/175 (87%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88318 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 88377

                                                                         
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
             |||||||  ||||| ||||| |||||||  ||| ||||||||||||||||||||||  ||
Sbjct: 88378 ttactgtaacctggaattgggtttgggctcttcttgcgcagcttaggtggaaggcgttga 88437

                                                                    
Query: 121   aggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagct 175
             |||   ||||||       |  |||||| ||||||||||||||||||||||||||
Sbjct: 88438 aggtatccttccggggatactggagccaacagtgagataccactctggaagagct 88492

---

>emb|X59768.1|CA23SRR C.americana 23S rRNA gene
          Length = 2902

 Score =  184 bits (93), Expect = 8e-44
 Identities = 119/125 (95%), Gaps = 2/125 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| 
Sbjct: 2041 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctacgaagc- 2099

                                                                        
Query: 61   ttact-gttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaag 119
            ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||
Sbjct: 2100 ttactggttccctgggattgggtttgggcctttcctgtgcagcttaggtggaaggcggag 2159

                 
Query: 120  aaggc 124
            |||||
Sbjct: 2160 aaggc 2164



 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 85/95 (89%), Gaps = 2/95 (2%)
 Strand = Plus / Plus

                                                                        
Query: 141  ccgagccatcagtgagataccactctggaagagctcggattctaaccttgtgtca-gacc 199
            |||||||||||||||||||||||||||||||||||   ||||||||||||||| | ||||
Sbjct: 2172 ccgagccatcagtgagataccactctggaagagctataattctaaccttgtgttaggacc 2231

                                               
Query: 200  cgcgggccaagggacagtctcaggtagacagtttc 234
              |||| |  |||||||||||||||||||||||||
Sbjct: 2232 aacggg-cgcgggacagtctcaggtagacagtttc 2265

---

>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2945

 Score =  184 bits (93), Expect = 8e-44
 Identities = 114/121 (94%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1996 atagacatgtctgtgaagatgcggactacccgcacctggacagaaagaccctatgaagct 2055

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            ||||||||||||||||||||||| |||   ||| ||||||||||||||||||||| ||||
Sbjct: 2056 ttactgttccctgggattggcttcgggttcttcttgcgcagcttaggtggaaggcaaaga 2115

             
Query: 121  a 121
            |
Sbjct: 2116 a 2116



 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 79/93 (84%), Gaps = 1/93 (1%)
 Strand = Plus / Plus

                                                                        
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaaccttgtgtcag-acccg 201
            ||||||||||||| |||||||||| |||||||| | |||||||||| ||||||  |    
Sbjct: 2136 gagccatcagtgaaataccactctagaagagctagaattctaacctcgtgtcaatattta 2195

                                             
Query: 202  cgggccaagggacagtctcaggtagacagtttc 234
            |||||| ||| |||||| |||||||||||||||
Sbjct: 2196 cgggccgaggaacagtcccaggtagacagtttc 2228

---

>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2669

 Score =  182 bits (92), Expect = 3e-43
 Identities = 113/120 (94%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2062 atagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2121

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            ||||||||||||||||| ||||||||||| ||| |||||||  ||||||| |||||||||
Sbjct: 2122 ttactgttccctgggatgggctttgggcccttcttgcgcagtctaggtgggaggcgaaga 2181



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 210  gggacagtctcaggtagacagtttc 234
            ||||||||| |||||||||||||||
Sbjct: 2270 gggacagtcccaggtagacagtttc 2294

---

>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2674

 Score =  182 bits (92), Expect = 3e-43
 Identities = 113/120 (94%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1924 atagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 1983

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||||| |||||| |||||||||| | || ||||||||||||||||||||| ||||
Sbjct: 1984 ttactgttccttgggatgggctttgggcttctcttgcgcagcttaggtggaaggcaaaga 2043



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 210  gggacagtctcaggtagacagtttc 234
            ||||||||| |||||||||||||||
Sbjct: 2132 gggacagtcccaggtagacagtttc 2156

---

>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2825

 Score =  182 bits (92), Expect = 3e-43
 Identities = 113/120 (94%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2075 atagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2134

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            ||||||||||||||||| ||||||||||| ||| |||||||  ||||||| |||||||||
Sbjct: 2135 ttactgttccctgggatgggctttgggcccttcttgcgcagtctaggtgggaggcgaaga 2194



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 210  gggacagtctcaggtagacagtttc 234
            ||||||||| |||||||||||||||
Sbjct: 2283 gggacagtcccaggtagacagtttc 2307

---

>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome
          Length = 157089

 Score =  174 bits (88), Expect = 8e-41
 Identities = 112/120 (93%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2189 atagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2248

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            ||||||||||||||||| || |||||||| ||| |||||||  ||||||| |||||||||
Sbjct: 2249 ttactgttccctgggatggggtttgggcccttcttgcgcagtctaggtgggaggcgaaga 2308



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 210  gggacagtctcaggtagacagtttc 234
            ||||||||| |||||||||||||||
Sbjct: 2397 gggacagtcccaggtagacagtttc 2421

---

>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2691

 Score =  170 bits (86), Expect = 1e-39
 Identities = 104/110 (94%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1940 atagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 1999

                                                              
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtgg 110
            |||||||||||||||||||| ||||||||| |  ||||||| ||||||||
Sbjct: 2000 ttactgttccctgggattgggtttgggcctcttttgcgcagtttaggtgg 2049

---

>emb|X13526.1|CHNPLR Tobacco chloroplast 23S rDNA and lincomycin resistant mutants
          Length = 93

 Score =  168 bits (85), Expect = 5e-39
 Identities = 88/89 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5  atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 64

                                       
Query: 61 ttactgttccctgggattggctttgggcc 89
          | |||||||||||||||||||||||||||
Sbjct: 65 tcactgttccctgggattggctttgggcc 93

---

>dbj|AK059158.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-D02, full
           insert sequence
          Length = 1502

 Score =  161 bits (81), Expect = 1e-36
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                       
Query: 154 gagataccactctggaagagctcggattctaaccttgtgtcagacccgcgggccaaggga 213
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gagataccactctggaagagctcggattctaaccttgtgtcagacccgcgggccaaggga 60

                                
Query: 214 cagtctcaggtagacagtttc 234
           |||||||||||||||||||||
Sbjct: 61  cagtctcaggtagacagtttc 81

---

>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2571

 Score =  159 bits (80), Expect = 5e-36
 Identities = 107/116 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1966 atagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2025

                                                                    
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
            |||||||  ||||| ||||| || ||||  ||| ||||||||||||||||||||||
Sbjct: 2026 ttactgtagcctggaattgggttcgggctcttcttgcgcagcttaggtggaaggcg 2081



 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                       
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaa 185
            |||||| |||||||||||||||||||||||||| | |||||||
Sbjct: 2108 gagccaccagtgagataccactctggaagagctagaattctaa 2150

---

>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2886

 Score =  157 bits (79), Expect = 2e-35
 Identities = 106/115 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1992 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2051

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            |||||||||  ||  ||||||||||||  | || |||||||||||||||| ||||
Sbjct: 2052 ttactgttctttgaaattggctttgggtttctcttgcgcagcttaggtgggaggc 2106

---

>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene,
            complete sequence; chloroplast gene for chloroplast
            product
          Length = 2888

 Score =  157 bits (79), Expect = 2e-35
 Identities = 112/123 (91%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1992 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2051

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||||  ||  ||||||||||||  | || |||||||||||||||| | || ||||
Sbjct: 2052 ttactgttctttgaaattggctttgggtttctcttgcgcagcttaggtgggaagcaaaga 2111

               
Query: 121  agg 123
            |||
Sbjct: 2112 agg 2114

---

>dbj|AK063570.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-G05, full
           insert sequence
          Length = 1023

 Score =  157 bits (79), Expect = 2e-35
 Identities = 79/79 (100%)
 Strand = Plus / Plus

                                                                       
Query: 156 gataccactctggaagagctcggattctaaccttgtgtcagacccgcgggccaagggaca 215
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gataccactctggaagagctcggattctaaccttgtgtcagacccgcgggccaagggaca 60

                              
Query: 216 gtctcaggtagacagtttc 234
           |||||||||||||||||||
Sbjct: 61  gtctcaggtagacagtttc 79

---

>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2840

 Score =  155 bits (78), Expect = 7e-35
 Identities = 102/110 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1967 atagacttgtctgtgaagatgcggactacctccacctggacagaaagaccctatgaagct 2026

                                                              
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtgg 110
            | ||||||||||||||| || |||||||  || |||||||||||||||||
Sbjct: 2027 tgactgttccctgggatggggtttgggctctttctgcgcagcttaggtgg 2076



 Score = 46.1 bits (23), Expect = 0.049
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 212  gacagtctcaggtagacagtttc 234
            |||||||||||||||||||||||
Sbjct: 2171 gacagtctcaggtagacagtttc 2193

---

>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes,
            complete sequence; and atp6 pseudogene, partial sequence;
            mitochondrial
          Length = 10403

 Score =  153 bits (77), Expect = 3e-34
 Identities = 198/238 (83%), Gaps = 8/238 (3%)
 Strand = Plus / Minus

                                                                        
Query: 4    gacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttta 63
            |||||||||||||||||||  ||||| | ||||||||||||||||||||||  ||||| |
Sbjct: 1928 gacatgtctgtgaagatgcaaactacttacacctggacagaaagaccctattcagcttca 1869

                                                                        
Query: 64   ctgttccctgggattggctttgggcctttcctgcgcagctta------ggtggaaggcga 117
            || ||||||||||||||||||||||||||| ||| ||||  |      |||| |||| ||
Sbjct: 1868 ctcttccctgggattggctttgggcctttcttgcacagcccatggagcggtgaaaggtga 1809

                                                                        
Query: 118  agaaggcccccttccnnnnnnncccgagccatcagtgagataccactctggaagagctcg 177
            |||||||||||||||       |||||||||||||||||||||||||||   |||||| |
Sbjct: 1808 agaaggcccccttcc-ggggggcccgagccatcagtgagataccactcttctagagcttg 1750

                                                                      
Query: 178  gattctaaccttgtgtca-gacccgcgggccaagggacagtctcaggtagacagtttc 234
             ||||||| ||||||||| ||||  |  |||||| |||||||||||||||||| ||||
Sbjct: 1749 aattctaatcttgtgtcaggacctacaagccaagcgacagtctcaggtagacaatttc 1692

---

>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2754

 Score =  153 bits (77), Expect = 3e-34
 Identities = 115/125 (92%), Gaps = 2/125 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaa-gaccctatgaagc 59
            ||||| |||||||||||||||||||||||   |||||||||||||| |||||||||||||
Sbjct: 2023 atagaaatgtctgtgaagatgcggactactcacacctggacagaaatgaccctatgaagc 2082

                                                                        
Query: 60   ttt-actgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaa 118
            ||| ||||||||||||||||| ||| ||||||||||||||||| |||| |||||||||||
Sbjct: 2083 ttttactgttccctgggattgacttggggcctttcctgcgcagtttagatggaaggcgaa 2142

                 
Query: 119  gaagg 123
            |||||
Sbjct: 2143 gaagg 2147



 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 211  ggacagtctcaggtagacagtttc 234
            ||||||||||||||||||||||||
Sbjct: 2223 ggacagtctcaggtagacagtttc 2246



 Score = 48.1 bits (24), Expect = 0.012
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 143  gagccatcagtgagataccactctggaa 170
            ||||||| ||||||||||||||||||||
Sbjct: 2163 gagccataagtgagataccactctggaa 2190

---

>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome
          Length = 200799

 Score =  151 bits (76), Expect = 1e-33
 Identities = 106/116 (91%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 169449 atagacatgtctgtgaagatgcggactaccttcacctggacagaaagaccctatgaagct 169390

                                                                      
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
              |||||||  ||||  ||||| |||||||   || ||||||||||||||||||||||
Sbjct: 169389 ttactgtagcctgacattgggtttgggctcgtcttgcgcagcttaggtggaaggcg 169334



 Score =  151 bits (76), Expect = 1e-33
 Identities = 106/116 (91%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 123477 atagacatgtctgtgaagatgcggactaccttcacctggacagaaagaccctatgaagct 123536

                                                                      
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
              |||||||  ||||  ||||| |||||||   || ||||||||||||||||||||||
Sbjct: 123537 ttactgtagcctgacattgggtttgggctcgtcttgcgcagcttaggtggaaggcg 123592

---

>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2737

 Score =  151 bits (76), Expect = 1e-33
 Identities = 113/124 (91%), Gaps = 1/124 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||
Sbjct: 2017 atagaaatgtctgtgaagatgcggactactcacacctggacagaaagaccctatgaagct 2076

                                                                        
Query: 61   tt-actgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaag 119
            || |||||||  |||||||| ||| ||||||||||||||||| |||| ||||||||||||
Sbjct: 2077 ttcactgttctttgggattgacttggggcctttcctgcgcagtttagatggaaggcgaag 2136

                
Query: 120  aagg 123
            ||||
Sbjct: 2137 aagg 2140



 Score = 48.1 bits (24), Expect = 0.012
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 143  gagccatcagtgagataccactctggaa 170
            ||||||| ||||||||||||||||||||
Sbjct: 2156 gagccataagtgagataccactctggaa 2183



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  agtctcaggtagacagtttc 234
            ||||||||||||||||||||
Sbjct: 2211 agtctcaggtagacagtttc 2230

---

>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2568

 Score =  151 bits (76), Expect = 1e-33
 Identities = 106/116 (91%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1961 atagacttgtccgtgaagatgcggactccctgcacctggacagaaagaccctatgaagct 2020

                                                                    
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
            ||||||| |||||  |||||||||||||   || ||||||||||||||||||||||
Sbjct: 2021 ttactgtaccctgcaattggctttgggctcctcttgcgcagcttaggtggaaggcg 2076



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            |||||| |||||||||||||||||||| |||||
Sbjct: 2103 gagccaacagtgagataccactctggaggagct 2135

---

>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2665

 Score =  151 bits (76), Expect = 1e-33
 Identities = 100/108 (92%)
 Strand = Plus / Plus

                                                                        
Query: 8    tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2065 tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 2124

                                                            
Query: 68   tccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
              ||||| ||||| || ||||  ||| |||||||||||||||||||||
Sbjct: 2125 agcctggaattggtttcgggctcttcttgcgcagcttaggtggaaggc 2172



 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            |||||||||||||||||||||||||||||||||
Sbjct: 2200 gagccatcagtgagataccactctggaagagct 2232

---

>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2937

 Score =  151 bits (76), Expect = 1e-33
 Identities = 106/116 (91%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2068 atagacatgtctgtgaagatgcggactaccttcacctggacagaaagaccctatgaagct 2127

                                                                    
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
            |||||||  ||||  ||||| |||||||   || ||||||||||||||||||||||
Sbjct: 2128 ttactgtagcctgacattgggtttgggctcgtcttgcgcagcttaggtggaaggcg 2183

---

>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; and large subunit ribosomal RNA
            (rrl) gene, partial sequence; chloroplast genes for
            chloroplast products
          Length = 4577

 Score =  151 bits (76), Expect = 1e-33
 Identities = 100/108 (92%)
 Strand = Plus / Plus

                                                                        
Query: 8    tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3834 tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 3893

                                                            
Query: 68   tccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
              ||||| ||||| || ||||  ||| |||||||||||||||||||||
Sbjct: 3894 agcctggaattggtttcgggctcttcttgcgcagcttaggtggaaggc 3941



 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            |||||||||||||||||||||||||||||||||
Sbjct: 3969 gagccatcagtgagataccactctggaagagct 4001

---

>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene,
            partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala
            (trnA(ugc)) genes, complete sequence; large subunit
            ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes,
            complete sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 6131

 Score =  149 bits (75), Expect = 5e-33
 Identities = 105/115 (91%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5026 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 5085

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            |||||||||  ||  ||||||||||||  | || || ||||||||||||| ||||
Sbjct: 5086 ttactgttctttgaaattggctttgggtttctcttgtgcagcttaggtgggaggc 5140

---

>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial
            sequence; chloroplast
          Length = 2661

 Score =  143 bits (72), Expect = 3e-31
 Identities = 105/116 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2054 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2113

                                                                    
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
            | |||||  ||||| ||||| |||||||  ||| |||||||  ||||||| |||||
Sbjct: 2114 tgactgtagcctggaattgggtttgggctcttcttgcgcagactaggtgggaggcg 2169



 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                       
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaa 185
            ||||||||||||||| ||||||||||||||||| | |||||||
Sbjct: 2196 gagccatcagtgagagaccactctggaagagctagaattctaa 2238

---

>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome
          Length = 191028

 Score =  143 bits (72), Expect = 3e-31
 Identities = 108/120 (90%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189983 atagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 190042

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||  | ||| ||||| ||||||| |||| |||||||  ||||||| |||| ||||
Sbjct: 190043 ttactgtagcttggaattgggtttgggcttttcttgcgcaggataggtgggaggctaaga 190102



 Score =  143 bits (72), Expect = 3e-31
 Identities = 108/120 (90%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151540 atagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 151599

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||  | ||| ||||| ||||||| |||| |||||||  ||||||| |||| ||||
Sbjct: 151600 ttactgtagcttggaattgggtttgggcttttcttgcgcaggataggtgggaggctaaga 151659



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                               
Query: 143    gagccatcagtgagataccactctggaagagctcggattctaaccttgt 191
              |||||| | ||||||||||||||| ||| |||| | |||||||||||||
Sbjct: 190125 gagccaacggtgagataccactctagaaaagctagaattctaaccttgt 190173



 Score = 46.1 bits (23), Expect = 0.049
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                     
Query: 152    gtgagataccactctggaagagctcggattctaaccttg 190
              ||||||||||||||| ||| |||| | ||||||||||||
Sbjct: 151691 gtgagataccactctagaaaagctagaattctaaccttg 151729

---

>gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-subunit ribosomal RNA (rrnL)
            gene
          Length = 5001

 Score =  141 bits (71), Expect = 1e-30
 Identities = 104/115 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3646 atagacatgtctgtgaagatgcggactacctgcacttggacagaaagaccctatgaagct 3705

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            |||||||  | ||||||||  ||||||    || |||||||||||||||||||||
Sbjct: 3706 ttactgtaacttgggattgaatttgggttcatcttgcgcagcttaggtggaaggc 3760



 Score = 46.1 bits (23), Expect = 0.049
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 143  gagccatcagtgagataccactctgga 169
            |||||| ||||||||||||||||||||
Sbjct: 3788 gagccaccagtgagataccactctgga 3814

---

>gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit ribosomal RNA gene, partial
            sequence; and putative protein genes, complete cds;
            chloroplast
          Length = 6151

 Score =  141 bits (71), Expect = 1e-30
 Identities = 104/115 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3603 atagacatgtctgtgaagatgcggactacctgcacttggacagaaagaccctatgaagct 3662

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            |||||||  | ||||||||  ||||||    || |||||||||||||||||||||
Sbjct: 3663 ttactgtaacttgggattgaatttgggttcatcttgcgcagcttaggtggaaggc 3717



 Score = 46.1 bits (23), Expect = 0.049
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 143  gagccatcagtgagataccactctgga 169
            |||||| ||||||||||||||||||||
Sbjct: 3745 gagccaccagtgagataccactctgga 3771

---

>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1,
            strain SAG 36.94
          Length = 4420

 Score =  141 bits (71), Expect = 1e-30
 Identities = 104/115 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3672 atagacatgtctgtgaagatgcggactacctgcaccaggacagaaagaccctatgaagct 3731

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            |||||||  | || |||||| || |||| |||| |||||||| ||||||| ||||
Sbjct: 3732 ttactgtagcttgagattgggttcgggcttttcttgcgcagcataggtgggaggc 3786



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            |||| ||||||||||||||||||| ||| ||||
Sbjct: 3814 gagctatcagtgagataccactctagaaaagct 3846

---

>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score =  139 bits (70), Expect = 4e-30
 Identities = 100/110 (90%)
 Strand = Plus / Minus

                                                                           
Query: 1       atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
               |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2049940 atagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2049881

                                                                 
Query: 61      ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtgg 110
               |||||||  ||||||||||| || |||| || | |||||||  |||||||
Sbjct: 2049880 ttactgtagcctgggattgggttcgggctttgcttgcgcaggataggtgg 2049831



 Score =  125 bits (63), Expect = 7e-26
 Identities = 66/67 (98%)
 Strand = Plus / Plus

                                                                           
Query: 1       atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
               |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1451561 atagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 1451620

                      
Query: 61      ttactgt 67
               |||||||
Sbjct: 1451621 ttactgt 1451627



 Score = 46.1 bits (23), Expect = 0.049
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 152     gtgagataccactctggaagagctcggattctaac 186
               ||||||||||||||||| |||||| | ||||||||
Sbjct: 2049789 gtgagataccactctggcagagctagaattctaac 2049755



 Score = 46.1 bits (23), Expect = 0.049
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                  
Query: 152     gtgagataccactctggaagagctcggattctaac 186
               ||||||||||||||||| |||||| | ||||||||
Sbjct: 1451712 gtgagataccactctggcagagctagaattctaac 1451746

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score =  139 bits (70), Expect = 4e-30
 Identities = 100/110 (90%)
 Strand = Plus / Plus

                                                                           
Query: 1       atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
               |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2314212 atagacgtgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2314271

                                                                 
Query: 61      ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtgg 110
               |||||||  ||||| ||||| || ||||||| | |||||||  |||||||
Sbjct: 2314272 ttactgtagcctggaattgggttcgggccttgcttgcgcaggataggtgg 2314321



 Score =  139 bits (70), Expect = 4e-30
 Identities = 100/110 (90%)
 Strand = Plus / Minus

                                                                           
Query: 1       atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
               |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107635 atagacgtgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 1107576

                                                                 
Query: 61      ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtgg 110
               |||||||  ||||| ||||| || ||||||| | |||||||  |||||||
Sbjct: 1107575 ttactgtagcctggaattgggttcgggccttgcttgcgcaggataggtgg 1107526

---

>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2888

 Score =  139 bits (70), Expect = 4e-30
 Identities = 138/163 (84%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||
Sbjct: 2296 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatcct 2355

                                                                        
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 132
            || ||||| ||||||| |||| |||||||| ||||||| |||||  |||||  |||||||
Sbjct: 2356 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggcgctgaaggttcccttcc 2415

                                                       
Query: 133  nnnnnnncccgagccatcagtgagataccactctggaagagct 175
                   |  ||||||||| ||||| |||||||||||||||||
Sbjct: 2416 gggggggctggagccatcattgagagaccactctggaagagct 2458

---

>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2834

 Score =  137 bits (69), Expect = 2e-29
 Identities = 105/117 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 2227 atagacatgtctgtgaagatgcggacttcctacacctggacagaaagaccctatgaagct 2286

                                                                     
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcga 117
            | |||||  ||||| ||||| |||||||  ||| |||||||| ||||||| ||||||
Sbjct: 2287 tgactgtagcctggaattgggtttgggctcttcttgcgcagcctaggtgggaggcga 2343



 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                       
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaa 185
            ||||||||||||||| ||||||||||||||||| | |||||||
Sbjct: 2369 gagccatcagtgagagaccactctggaagagctagaattctaa 2411

---

>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL)
            gene
          Length = 5398

 Score =  135 bits (68), Expect = 7e-29
 Identities = 104/116 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2179 atagacatgtccgtgaagatgcggactacctacacctggacagaaagaccctatgaagct 2238

                                                                    
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
            |||||||  ||||| ||||  ||||||| |||| |||||||  ||||||| |||||
Sbjct: 2239 ttactgtaacctggaattgaatttgggcttttcttgcgcagtctaggtgggaggcg 2294



 Score = 46.1 bits (23), Expect = 0.049
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 143  gagccatcagtgagataccactctgga 169
            ||||||||||||||| |||||||||||
Sbjct: 2321 gagccatcagtgagagaccactctgga 2347

---

>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 3669

 Score =  135 bits (68), Expect = 7e-29
 Identities = 104/116 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2006 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2065

                                                                    
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
            | |||||  | ||| ||||| || ||||  ||| |||||||| ||||||| |||||
Sbjct: 2066 tgactgtagcttggaattgggttcgggctcttcttgcgcagcctaggtgggaggcg 2121



 Score = 46.1 bits (23), Expect = 0.049
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaa 185
            |||||| |||||||| ||||||||||| ||||| | |||||||
Sbjct: 2148 gagccaacagtgagagaccactctggaggagctagaattctaa 2190

---

>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence
          Length = 150613

 Score =  135 bits (68), Expect = 7e-29
 Identities = 104/116 (89%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26815 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 26874

                                                                     
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
             | |||||  | ||| ||||| || ||||  ||| |||||||| ||||||| |||||
Sbjct: 26875 tgactgtagcttggaattgggttcgggctcttcttgcgcagcctaggtgggaggcg 26930



 Score = 46.1 bits (23), Expect = 0.049
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 143   gagccatcagtgagataccactctggaagagctcggattctaa 185
             |||||| |||||||| ||||||||||| ||||| | |||||||
Sbjct: 26957 gagccaacagtgagagaccactctggaggagctagaattctaa 26999

---

>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome
          Length = 191952

 Score =  135 bits (68), Expect = 7e-29
 Identities = 107/120 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190907 atagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 190966

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||  | ||| ||||| || |||| |||| |||||||  ||||||| |||| ||||
Sbjct: 190967 ttactgtagcttggaattgggttcgggcttttcttgcgcaggataggtgggaggctaaga 191026



 Score =  135 bits (68), Expect = 7e-29
 Identities = 107/120 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152334 atagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 152393

                                                                          
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
              |||||||  | ||| ||||| || |||| |||| |||||||  ||||||| |||| ||||
Sbjct: 152394 ttactgtagcttggaattgggttcgggcttttcttgcgcaggataggtgggaggctaaga 152453



 Score = 48.1 bits (24), Expect = 0.012
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 151    agtgagataccactctggaagagctcggattctaaccttg 190
              |||||||||||||||||||| ||||   ||||||||||||
Sbjct: 191057 agtgagataccactctggaaaagctaaaattctaaccttg 191096



 Score = 48.1 bits (24), Expect = 0.012
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 151    agtgagataccactctggaagagctcggattctaaccttg 190
              |||||||||||||||||||| ||||   ||||||||||||
Sbjct: 152484 agtgagataccactctggaaaagctaaaattctaaccttg 152523

---

>gb|AC074111.2| Arabidopsis thaliana chromosome 1 BAC T18N24 genomic sequence, complete
             sequence
          Length = 98536

 Score =  133 bits (67), Expect = 3e-28
 Identities = 83/87 (95%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 95706 atagacatgtctgtgaagatgcggactaccagcacctggacagaaagaccctctgaagct 95765

                                        
Query: 61    ttactgttccctgggattggctttggg 87
             | |||| ||||||||||||||||||||
Sbjct: 95766 tcactg-tccctgggattggctttggg 95791



 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                 
Query: 72    tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 123
             ||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 95788 tgggattggctttgggcttttcctgcgcagcttaggtggaaggcaaagaagg 95839

---

>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 7514

 Score =  133 bits (67), Expect = 3e-28
 Identities = 103/115 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4756 atagacatgtccgtgaagatgcggacttcctgcacctggacagaaagaccctatgaagct 4815

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            | |||||  ||||| ||||| |||||||  ||| |||||||| ||||||| ||||
Sbjct: 4816 tgactgtagcctggaattgggtttgggctcttcttgcgcagcctaggtgggaggc 4870

---

>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2622

 Score =  133 bits (67), Expect = 3e-28
 Identities = 103/115 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2015 atagacatgtccgtgaagatgcggacttcctgcacctggacagaaagaccctatgaagct 2074

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            |||||||  ||||| ||||| |||||||  ||  |||||||| ||||||| ||||
Sbjct: 2075 ttactgtagcctggaattgggtttgggctctttttgcgcagcctaggtgggaggc 2129



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            ||||||||||||||| ||||||||  |||||||
Sbjct: 2157 gagccatcagtgagagaccactctaaaagagct 2189

---

>gb|AC007505.4|AC007505 Arabidopsis thaliana chromosome I BAC F28L22 genomic sequence, complete
             sequence
          Length = 134499

 Score =  133 bits (67), Expect = 3e-28
 Identities = 83/87 (95%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 21571 atagacatgtctgtgaagatgcggactaccagcacctggacagaaagaccctctgaagct 21630

                                        
Query: 61    ttactgttccctgggattggctttggg 87
             | |||| ||||||||||||||||||||
Sbjct: 21631 tcactg-tccctgggattggctttggg 21656



 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                 
Query: 72    tgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 123
             ||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 21653 tgggattggctttgggcttttcctgcgcagcttaggtggaaggcaaagaagg 21704

---

>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94
          Length = 4290

 Score =  133 bits (67), Expect = 3e-28
 Identities = 67/67 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3535 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 3594

                   
Query: 61   ttactgt 67
            |||||||
Sbjct: 3595 ttactgt 3601



 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 143  gagccatcagtgagataccactct 166
            ||||||||||||||||||||||||
Sbjct: 3677 gagccatcagtgagataccactct 3700

---

>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome
          Length = 135599

 Score =  133 bits (67), Expect = 3e-28
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 113404 atagacatgtctgtgaagatgcggactacctgcaccaggacagaaagaccctatgaagct 113345

                                                                     
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
              |||||||  ||||  ||||| || |||| |||| |||||||  ||||||| ||||
Sbjct: 113344 ttactgtagcctgatattgggttcgggcttttcttgcgcagtataggtgggaggc 113290



 Score =  133 bits (67), Expect = 3e-28
 Identities = 103/115 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4113 atagacatgtctgtgaagatgcggactacctgcaccaggacagaaagaccctatgaagct 4172

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            |||||||  ||||  ||||| || |||| |||| |||||||  ||||||| ||||
Sbjct: 4173 ttactgtagcctgatattgggttcgggcttttcttgcgcagtataggtgggaggc 4227



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                          
Query: 143    gagccatcagtgagataccactctggaagagctcggattctaac 186
              ||||| ||||||||||||||||||||||||||| | ||||||||
Sbjct: 113262 gagccgtcagtgagataccactctggaagagctagaattctaac 113219



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                        
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaac 186
            ||||| ||||||||||||||||||||||||||| | ||||||||
Sbjct: 4255 gagccgtcagtgagataccactctggaagagctagaattctaac 4298

---

>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-CelI gene
          Length = 3779

 Score =  131 bits (66), Expect = 1e-27
 Identities = 137/163 (84%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            |||||||||||||||||||||||| |||||||||||||||||||||||| |||||  |||
Sbjct: 3187 gtgaagatgcggactacctgcaccaggacagaaagaccctatgaagcttgactgtatcct 3246

                                                                        
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 132
            || ||||| || |||| |||| |||||||| ||||||| |||| | |||||  |||||||
Sbjct: 3247 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggctatgaaggttcccttcc 3306

                                                       
Query: 133  nnnnnnncccgagccatcagtgagataccactctggaagagct 175
                   |  ||||||||| ||||| |||||||||||||||||
Sbjct: 3307 gggggaacatgagccatcattgagagaccactctggaagagct 3349

---

>emb|AJ864703.1| Fragaria vesca partial chloroplast 23S rRNA gene
          Length = 500

 Score =  129 bits (65), Expect = 4e-27
 Identities = 87/93 (93%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 143 gagccatcagtgagataccactctggaagagctcggattctaaccttgtgtca-gacccg 201
           ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||  
Sbjct: 419 gagccatcagtgagataccactctggaagagctagaattctaaccttgtgtcaggaccta 360

                                            
Query: 202 cgggccaagggacagtctcaggtagacagtttc 234
           |||||||||||||| ||||||||||||||||||
Sbjct: 359 cgggccaagggacattctcaggtagacagtttc 327

---

>emb|AJ879830.1| Uncultured organism 23S rRNA gene, clone LP4-148
          Length = 687

 Score =  129 bits (65), Expect = 4e-27
 Identities = 98/109 (89%)
 Strand = Plus / Plus

                                                                       
Query: 7   atgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactg 66
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 atgtctgtgaagatacggactacctgcacctggacagaaagaccctatgaagctttactg 565

                                                            
Query: 67  ttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
           |  ||||| |||||||| |||   | |||||||||| ||||||| ||||
Sbjct: 566 tagcctggaattggcttcgggttctgcctgcgcagcataggtgggaggc 614



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 152 gtgagataccactctggaagagct 175
           ||||||||||||||||| ||||||
Sbjct: 651 gtgagataccactctggcagagct 674

---

>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S
            rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and
            ITS1, strain SAG 45.88
          Length = 3065

 Score =  129 bits (65), Expect = 4e-27
 Identities = 107/121 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2500 atagacatgtctgtgaagatgcggactacctgcaccaggacagaaagaccctatgaagct 2559

                                                                        
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaaga 120
            |||||||  ||||  ||||| || ||||  ||| |||||||  ||||||| |||| ||||
Sbjct: 2560 ttactgtagcctgatattgggttcgggctcttcttgcgcagtataggtgggaggctaaga 2619

             
Query: 121  a 121
            |
Sbjct: 2620 a 2620



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                        
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaac 186
            |||||| |||||||||||||||||||||||||| | ||||||||
Sbjct: 2642 gagccaacagtgagataccactctggaagagctagaattctaac 2685

---

>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2664

 Score =  127 bits (64), Expect = 2e-26
 Identities = 97/108 (89%)
 Strand = Plus / Plus

                                                                        
Query: 8    tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2065 tgtctgtgaagatgcggactacctgcacttggacagaaagaccctatgaagctttactgt 2124

                                                            
Query: 68   tccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
              | || ||||||  | |||| |||| |||||||||||||||| ||||
Sbjct: 2125 agcttgagattgggctcgggcttttcttgcgcagcttaggtgggaggc 2172



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 143  gagccatcagtgagataccactct 166
            ||||| ||||||||||||||||||
Sbjct: 2200 gagccgtcagtgagataccactct 2223

---

>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene
          Length = 4870

 Score =  127 bits (64), Expect = 2e-26
 Identities = 91/100 (91%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3740 atagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 3799

                                                    
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgca 100
            |||||||  | ||| ||||| |||| || |||| ||||||
Sbjct: 3800 ttactgtaacttggaattgggtttgagcttttcttgcgca 3839



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                            
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaaccttg 190
            |||| ||||||||||||||||||||||| |||| | ||||||||||||
Sbjct: 3882 gagctatcagtgagataccactctggaaaagctagaattctaaccttg 3929

---

>gb|AY389864.1| Uncultured phototrophic eukaryote large subunit ribosomal RNA gene,
           partial sequence; chloroplast
          Length = 700

 Score =  125 bits (63), Expect = 7e-26
 Identities = 66/67 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 atagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 616

                  
Query: 61  ttactgt 67
           |||||||
Sbjct: 617 ttactgt 623

---

>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome
          Length = 22085

 Score =  125 bits (63), Expect = 7e-26
 Identities = 66/67 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7759 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 7818

                   
Query: 61   ttactgt 67
            | |||||
Sbjct: 7819 tgactgt 7825

---

>emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast genome
          Length = 119704

 Score =  125 bits (63), Expect = 7e-26
 Identities = 66/67 (98%)
 Strand = Plus / Minus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48374 atagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 48315

                    
Query: 61    ttactgt 67
             |||||||
Sbjct: 48314 ttactgt 48308



 Score =  125 bits (63), Expect = 7e-26
 Identities = 66/67 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5985 atagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 6044

                   
Query: 61   ttactgt 67
            |||||||
Sbjct: 6045 ttactgt 6051

---

>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA
            genecluster
          Length = 5001

 Score =  125 bits (63), Expect = 7e-26
 Identities = 66/67 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4820 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 4879

                   
Query: 61   ttactgt 67
            | |||||
Sbjct: 4880 tgactgt 4886

---

>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 6750

 Score =  125 bits (63), Expect = 7e-26
 Identities = 93/103 (90%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||
Sbjct: 4382 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatcct 4441

                                                       
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            || ||||| ||||||| |||| |||||||| ||||||| ||||
Sbjct: 4442 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggc 4484



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            ||||||||| ||||| |||||||||||||||||
Sbjct: 4512 gagccatcattgagagaccactctggaagagct 4544

---

>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2715

 Score =  125 bits (63), Expect = 7e-26
 Identities = 66/67 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2111 atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 2170

                   
Query: 61   ttactgt 67
            | |||||
Sbjct: 2171 tgactgt 2177

---

>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2604

 Score =  125 bits (63), Expect = 7e-26
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||| |||||||||||||| |||||| |||  |||||||||||||||||||||||
Sbjct: 1998 atagacatgcctgtgaagatgcgggctacctccactgggacagaaagaccctatgaagct 2057

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            |||||||||||||| ||||| | | |||| | |||||||||| ||||||| ||||
Sbjct: 2058 ttactgttccctggcattgggtctcggccctccctgcgcagcctaggtgggaggc 2112

---

>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene,
            complete sequence; chloroplast gene for chloroplast
            product
          Length = 2901

 Score =  125 bits (63), Expect = 7e-26
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||| |||||||||||||| |||||| |||  |||||||||||||||||||||||
Sbjct: 2012 atagacatgcctgtgaagatgcgggctacctccactgggacagaaagaccctatgaagct 2071

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            |||||||||||||| ||||| | | |||| | |||||||||| ||||||| ||||
Sbjct: 2072 ttactgttccctggcattgggtctcggccctccctgcgcagcctaggtgggaggc 2126

---

>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene,
            partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala
            (trnA(ugc)) genes, complete sequence; large subunit
            ribosomal RNA (rrl) gene, complete sequence; and 5S
            ribosomal RNA (rrf) gene, partial sequence; chloroplast
            genes for chloroplast products
          Length = 7627

 Score =  125 bits (63), Expect = 7e-26
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||| |||||||||||||| |||||| |||  |||||||||||||||||||||||
Sbjct: 6585 atagacatgcctgtgaagatgcgggctacctccactgggacagaaagaccctatgaagct 6644

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            |||||||||||||| ||||| | | |||| | |||||||||| ||||||| ||||
Sbjct: 6645 ttactgttccctggcattgggtctcggccctccctgcgcagcctaggtgggaggc 6699

---

>emb|X68907.1|CHCFRRNL3 Chloroplast Chlamydomonas frankii rrnL gene, exon 3
          Length = 332

 Score =  125 bits (63), Expect = 7e-26
 Identities = 93/103 (90%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
           ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||
Sbjct: 96  gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatcct 155

                                                      
Query: 73  gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
           || ||||| ||||||| |||| |||||||| ||||||| ||||
Sbjct: 156 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggc 198



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 143 gagccatcagtgagataccactctggaagagct 175
           ||||||||| ||||| |||||||||||||||||
Sbjct: 226 gagccatcattgagagaccactctggaagagct 258

---

>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1,
            strain SAG 34.90
          Length = 4586

 Score =  125 bits (63), Expect = 7e-26
 Identities = 66/67 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3852 atagacatgtctgtgaagatgcggactacctgcaccaggacagaaagaccctatgaagct 3911

                   
Query: 61   ttactgt 67
            |||||||
Sbjct: 3912 ttactgt 3918



 Score = 71.9 bits (36), Expect = 8e-10
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                        
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaac 186
            ||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 3994 gagccatcagtgagataccactctggaagagctagaattctaac 4037

---

>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-CmoI genes
          Length = 8176

 Score =  123 bits (62), Expect = 3e-25
 Identities = 136/163 (83%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||
Sbjct: 3817 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttgactgtatcct 3876

                                                                        
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 132
            |  ||||| || |||| |||| |||||||| ||||||| |||| | |||||  | |||||
Sbjct: 3877 gtaattgggttcgggcttttcttgcgcagcctaggtgggaggctatgaaggttctcttcc 3936

                                                       
Query: 133  nnnnnnncccgagccatcagtgagataccactctggaagagct 175
                   |  ||||||||| ||||| |||||||||||||||||
Sbjct: 3937 gggagaactagagccatcattgagagaccactctggaagagct 3979

---

>gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 4406

 Score =  123 bits (62), Expect = 3e-25
 Identities = 136/163 (83%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||
Sbjct: 3546 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatcct 3605

                                                                        
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 132
            || ||||| || |||| |||| |||||||| ||||||| |||| | |||||  |||||||
Sbjct: 3606 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggctatgaaggttcccttcc 3665

                                                       
Query: 133  nnnnnnncccgagccatcagtgagataccactctggaagagct 175
                      ||||||||| ||||| |||||||||||||||||
Sbjct: 3666 gggggaatttgagccatcattgagagaccactctggaagagct 3708

---

>emb|X68892.1|CHCGRRNL2 Chloroplast Chlamydomonas geitleri rrnL gene, exon 2
          Length = 957

 Score =  123 bits (62), Expect = 3e-25
 Identities = 136/163 (83%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
           ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||
Sbjct: 97  gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatcct 156

                                                                       
Query: 73  gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 132
           || ||||| || |||| |||| |||||||| ||||||| |||| | |||||  |||||||
Sbjct: 157 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggctatgaaggttcccttcc 216

                                                      
Query: 133 nnnnnnncccgagccatcagtgagataccactctggaagagct 175
                     ||||||||| ||||| |||||||||||||||||
Sbjct: 217 gggggaatttgagccatcattgagagaccactctggaagagct 259

---

>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial
            sequence
          Length = 2435

 Score =  121 bits (61), Expect = 1e-24
 Identities = 76/81 (93%)
 Strand = Plus / Plus

                                                                        
Query: 8    tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1608 tgtctgtgaagatacggactacctgcacctggacagaaagaccctatgaagctttactgt 1667

                                 
Query: 68   tccctgggattggctttgggc 88
              ||||| |||||||| ||||
Sbjct: 1668 agcctggaattggcttcgggc 1688

---

>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome
          Length = 183883

 Score =  119 bits (60), Expect = 4e-24
 Identities = 60/60 (100%)
 Strand = Plus / Minus

                                                                         
Query: 8     tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25829 tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 25770

---

>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial
            sequence
          Length = 2444

 Score =  119 bits (60), Expect = 4e-24
 Identities = 96/108 (88%)
 Strand = Plus / Plus

                                                                        
Query: 8    tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1617 tgtctgtgaagatacggactacctgcacctggacagaaagaccctatgaagctttactgt 1676

                                                            
Query: 68   tccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
              ||||| ||||| || |||| ||  ||||||||  ||||||| ||||
Sbjct: 1677 agcctggaattgggttcgggctttaactgcgcaggataggtgggaggc 1724

---

>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence
          Length = 2441

 Score =  119 bits (60), Expect = 4e-24
 Identities = 96/108 (88%)
 Strand = Plus / Plus

                                                                        
Query: 8    tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1614 tgtctgtgaagatacggactacctgcacctggacagaaagaccctatgaagctttactgt 1673

                                                            
Query: 68   tccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
              ||||| ||||| || |||| ||  ||||||||  ||||||| ||||
Sbjct: 1674 agcctggaattgggttcgggctttaactgcgcaggataggtgggaggc 1721

---

>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 4038

 Score =  119 bits (60), Expect = 4e-24
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  | |
Sbjct: 2098 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 2157

                                                        
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
            || ||||| ||||||| |||| |||||||| ||||||| |||||
Sbjct: 2158 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggcg 2201



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            ||||||||| ||||| |||||||||||||||||
Sbjct: 2228 gagccatcattgagagaccactctggaagagct 2260

---

>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 2632

 Score =  119 bits (60), Expect = 4e-24
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 2028 atagacatgtccgtgaagatccggactacttgcacctggacagaaagaccctatgaagct 2087

                                                                    
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
            | ||| |  | ||||||||| |||||||| ||| |||||||  ||||||| |||||
Sbjct: 2088 tgactataacttgggattgggtttgggcccttcttgcgcagtctaggtgggaggcg 2143



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 143  gagccatcagtgagataccactctggaag 171
            ||||||||||||||| |||||||||||||
Sbjct: 2170 gagccatcagtgagagaccactctggaag 2198

---

>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; and large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; chloroplast genes for chloroplast products
          Length = 5057

 Score =  119 bits (60), Expect = 4e-24
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 3911 atagacatgtccgtgaagatccggactacttgcacctggacagaaagaccctatgaagct 3970

                                                                    
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
            | ||| |  | ||||||||| |||||||| ||| |||||||  ||||||| |||||
Sbjct: 3971 tgactataacttgggattgggtttgggcccttcttgcgcagtctaggtgggaggcg 4026



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 143  gagccatcagtgagataccactctggaag 171
            ||||||||||||||| |||||||||||||
Sbjct: 4053 gagccatcagtgagagaccactctggaag 4081

---

>gb|AF041468.1| Guillardia theta complete plastid genome
          Length = 121524

 Score =  119 bits (60), Expect = 4e-24
 Identities = 60/60 (100%)
 Strand = Plus / Minus

                                                                         
Query: 8     tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38440 tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 38381



 Score =  119 bits (60), Expect = 4e-24
 Identities = 60/60 (100%)
 Strand = Plus / Plus

                                                                         
Query: 8     tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20960 tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 21019

---

>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1
          Length = 2572

 Score =  119 bits (60), Expect = 4e-24
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  | |
Sbjct: 2098 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 2157

                                                        
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
            || ||||| ||||||| |||| |||||||| ||||||| |||||
Sbjct: 2158 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggcg 2201



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            ||||||||| ||||| |||||||||||||||||
Sbjct: 2228 gagccatcattgagagaccactctggaagagct 2260

---

>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S
            ribosomal RNA, and 5S ribosomal RNA genes, complete
            sequence; chloroplast
          Length = 5026

 Score =  117 bits (59), Expect = 2e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3726 atagacttgtctgtgaagatgcggactacctgcaccaggacagaaagaccctatgaagct 3785

                   
Query: 61   ttactgt 67
            |||||||
Sbjct: 3786 ttactgt 3792



 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 143  gagccatcagtgagataccactct 166
            ||||||||||||||||||||||||
Sbjct: 3868 gagccatcagtgagataccactct 3891

---

>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome
          Length = 105309

 Score =  117 bits (59), Expect = 2e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 17061 atagacttgtctgtgaagatgcggactacctgcacctggacaaaaagaccctatgaagct 17002

                    
Query: 61    ttactgt 67
             |||||||
Sbjct: 17001 ttactgt 16995



 Score =  117 bits (59), Expect = 2e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3805 atagacttgtctgtgaagatgcggactacctgcacctggacaaaaagaccctatgaagct 3864

                   
Query: 61   ttactgt 67
            |||||||
Sbjct: 3865 ttactgt 3871

---

>gb|L42986.1|RTCCPRGOLA Carteria lunzensis
          Length = 4448

 Score =  117 bits (59), Expect = 2e-23
 Identities = 101/115 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3056 atagacttgtccgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 3115

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            | |||||  ||||| || || |||||||   || |||||||| ||||||| ||||
Sbjct: 3116 tgactgtatcctggaatagggtttgggctcatcttgcgcagcctaggtgggaggc 3170



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            ||||||||| ||||| |||||||||||||||||
Sbjct: 3198 gagccatcattgagagaccactctggaagagct 3230

---

>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-ChuI gene
          Length = 4005

 Score =  117 bits (59), Expect = 2e-23
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  |||
Sbjct: 2050 gtgaagatgcggactacttgcacctggacagaaagaccctatgaagcttgactgtatcct 2109

                                                       
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            || ||||| || |||| |||| |||||||| ||||||| ||||
Sbjct: 2110 ggaattggtttcgggcttttcttgcgcagcctaggtgggaggc 2152

---

>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal
            RNA (rrnL), site-specific DNA endonuclease I-CpaI,
            site-specific DNA endonuclease I-CpaIII, site-specific
            DNA endonuclease I-CpaIV, site-specific DNA endonuclease
            I-CpaV genes
          Length = 8217

 Score =  117 bits (59), Expect = 2e-23
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||
Sbjct: 4291 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatcct 4350

                                                       
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            || ||||| || |||| |||| |||||||| ||||||| ||||
Sbjct: 4351 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggc 4393

---

>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL),
            site-specific DNA endonuclease I-CcaI genes
          Length = 5999

 Score =  117 bits (59), Expect = 2e-23
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  | |
Sbjct: 4666 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 4725

                                                       
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            || ||||| ||||||| |||| |||||||| ||||||| ||||
Sbjct: 4726 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggc 4768



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            ||||| ||| ||||| |||||||||||||||||
Sbjct: 4796 gagccgtcattgagagaccactctggaagagct 4828

---

>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 3978

 Score =  117 bits (59), Expect = 2e-23
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            |||||||||||||||||| |||||||||||||||||||||||||||||| |||||  |||
Sbjct: 2124 gtgaagatgcggactaccagcacctggacagaaagaccctatgaagcttgactgtatcct 2183

                                                       
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            || ||||| || |||| |||| |||||||| ||||||| ||||
Sbjct: 2184 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggc 2226

---

>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2863

 Score =  117 bits (59), Expect = 2e-23
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  |||
Sbjct: 2027 gtgaagatgcggactacttgcacctggacagaaagaccctatgaagcttgactgtatcct 2086

                                                       
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            || ||||| || |||| |||| |||||||| ||||||| ||||
Sbjct: 2087 ggaattggtttcgggcttttcttgcgcagcctaggtgggaggc 2129

---

>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome
          Length = 203828

 Score =  117 bits (59), Expect = 2e-23
 Identities = 92/103 (89%)
 Strand = Plus / Minus

                                                                          
Query: 13     gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
              ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  | |
Sbjct: 150339 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 150280

                                                         
Query: 73     gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
              || ||||| ||||||| |||| |||||||| ||||||| ||||
Sbjct: 150279 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggc 150237



 Score =  117 bits (59), Expect = 2e-23
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                         
Query: 13    gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
             ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  | |
Sbjct: 43864 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 43923

                                                        
Query: 73    gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
             || ||||| ||||||| |||| |||||||| ||||||| ||||
Sbjct: 43924 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggc 43966



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 143    gagccatcagtgagataccactctggaagagct 175
              ||||| ||| ||||| |||||||||||||||||
Sbjct: 150209 gagccgtcattgagagaccactctggaagagct 150177



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 143   gagccatcagtgagataccactctggaagagct 175
             ||||| ||| ||||| |||||||||||||||||
Sbjct: 43994 gagccgtcattgagagaccactctggaagagct 44026

---

>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome
          Length = 164921

 Score =  117 bits (59), Expect = 2e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62668 atagacttgtccgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 62609

                    
Query: 61    ttactgt 67
             |||||||
Sbjct: 62608 ttactgt 62602

---

>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score =  117 bits (59), Expect = 2e-23
 Identities = 92/103 (89%)
 Strand = Plus / Minus

                                                                           
Query: 8       tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
               ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2332829 tgtctgtgaagatgcggactacctgcacccggacagaaagaccctatgaagctttactgt 2332770

                                                          
Query: 68      tccctgggattggctttgggcctttcctgcgcagcttaggtgg 110
                 ||||| ||||| || |||| || | |||||||  |||||||
Sbjct: 2332769 agcctggaattgggttcgggctttgcttgcgcaggataggtgg 2332727



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                       
Query: 150     cagtgagataccactctggaagagctcggattctaacctt 189
               ||||||||||||||||||| |  ||| | |||||||||||
Sbjct: 2332687 cagtgagataccactctggcaaggctagaattctaacctt 2332648

---

>emb|X68901.1|CHCPRRNX3 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 3
          Length = 332

 Score =  117 bits (59), Expect = 2e-23
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
           ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||
Sbjct: 96  gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatcct 155

                                                      
Query: 73  gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
           || ||||| || |||| |||| |||||||| ||||||| ||||
Sbjct: 156 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggc 198

---

>emb|X61179.1|CHPLIB P.littoralis chloroplast DNA for 23S rRNA (partial) and 5S rRNA
          Length = 2957

 Score =  117 bits (59), Expect = 2e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1891 atagacttgtctgtgaagatgcggactacctgcaccaggacagaaagaccctatgaagct 1950

                   
Query: 61   ttactgt 67
            |||||||
Sbjct: 1951 ttactgt 1957



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 147  catcagtgagataccactct 166
            ||||||||||||||||||||
Sbjct: 2037 catcagtgagataccactct 2056

---

>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1
          Length = 2524

 Score =  117 bits (59), Expect = 2e-23
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  |||
Sbjct: 2050 gtgaagatgcggactacttgcacctggacagaaagaccctatgaagcttgactgtatcct 2109

                                                       
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            || ||||| || |||| |||| |||||||| ||||||| ||||
Sbjct: 2110 ggaattggtttcgggcttttcttgcgcagcctaggtgggaggc 2152

---

>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA
          Length = 2603

 Score =  117 bits (59), Expect = 2e-23
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  | |
Sbjct: 2036 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 2095

                                                       
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            || ||||| ||||||| |||| |||||||| ||||||| ||||
Sbjct: 2096 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggc 2138



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            ||||| ||| ||||| |||||||||||||||||
Sbjct: 2166 gagccgtcattgagagaccactctggaagagct 2198

---

>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene
          Length = 2904

 Score =  117 bits (59), Expect = 2e-23
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  | |
Sbjct: 2047 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 2106

                                                       
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            || ||||| ||||||| |||| |||||||| ||||||| ||||
Sbjct: 2107 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggc 2149

---

>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score =  115 bits (58), Expect = 6e-23
 Identities = 104/118 (88%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    atgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagc-tttact 65
            |||||||||||||||| ||||||   |||||||||| |||||||||||||||| ||||||
Sbjct: 1972 atgtctgtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttact 2031

                                                                      
Query: 66   gttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 123
            |||||||||||||| ||| ||||||||||||| ||| |||  || |||| ||||||||
Sbjct: 2032 gttccctgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2089



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 211  ggacagtctcaggtagacagtttc 234
            ||||||||| ||||||||||||||
Sbjct: 2157 ggacagtcttaggtagacagtttc 2180



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  agtgagataccactctggaa 170
            ||||||||||||||||||||
Sbjct: 2105 agtgagataccactctggaa 2124

---

>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  115 bits (58), Expect = 6e-23
 Identities = 104/118 (88%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    atgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagc-tttact 65
            |||||||||||||||| ||||||   |||||||||| |||||||||||||||| ||||||
Sbjct: 1973 atgtctgtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttact 2032

                                                                      
Query: 66   gttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 123
            |||||||||||||| ||| ||||||||||||| ||| |||  || |||| ||||||||
Sbjct: 2033 gttccctgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 211  ggacagtctcaggtagacagtttc 234
            ||||||||| ||||||||||||||
Sbjct: 2158 ggacagtcttaggtagacagtttc 2181



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  agtgagataccactctggaa 170
            ||||||||||||||||||||
Sbjct: 2106 agtgagataccactctggaa 2125

---

>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  115 bits (58), Expect = 6e-23
 Identities = 104/118 (88%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    atgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagc-tttact 65
            |||||||||||||||| ||||||   |||||||||| |||||||||||||||| ||||||
Sbjct: 1973 atgtctgtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttact 2032

                                                                      
Query: 66   gttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 123
            |||||||||||||| ||| ||||||||||||| ||| |||  || |||| ||||||||
Sbjct: 2033 gttccctgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 211  ggacagtctcaggtagacagtttc 234
            ||||||||| ||||||||||||||
Sbjct: 2158 ggacagtcttaggtagacagtttc 2181



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  agtgagataccactctggaa 170
            ||||||||||||||||||||
Sbjct: 2106 agtgagataccactctggaa 2125

---

>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  115 bits (58), Expect = 6e-23
 Identities = 104/118 (88%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    atgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagc-tttact 65
            |||||||||||||||| ||||||   |||||||||| |||||||||||||||| ||||||
Sbjct: 1973 atgtctgtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttact 2032

                                                                      
Query: 66   gttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 123
            |||||||||||||| ||| ||||||||||||| ||| |||  || |||| ||||||||
Sbjct: 2033 gttccctgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 211  ggacagtctcaggtagacagtttc 234
            ||||||||| ||||||||||||||
Sbjct: 2158 ggacagtcttaggtagacagtttc 2181



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  agtgagataccactctggaa 170
            ||||||||||||||||||||
Sbjct: 2106 agtgagataccactctggaa 2125

---

>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  115 bits (58), Expect = 6e-23
 Identities = 104/118 (88%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    atgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagc-tttact 65
            |||||||||||||||| ||||||   |||||||||| |||||||||||||||| ||||||
Sbjct: 1973 atgtctgtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttact 2032

                                                                      
Query: 66   gttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 123
            |||||||||||||| ||| ||||||||||||| ||| |||  || |||| ||||||||
Sbjct: 2033 gttccctgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 211  ggacagtctcaggtagacagtttc 234
            ||||||||| ||||||||||||||
Sbjct: 2158 ggacagtcttaggtagacagtttc 2181



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  agtgagataccactctggaa 170
            ||||||||||||||||||||
Sbjct: 2106 agtgagataccactctggaa 2125

---

>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  115 bits (58), Expect = 6e-23
 Identities = 104/118 (88%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    atgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagc-tttact 65
            |||||||||||||||| ||||||   |||||||||| |||||||||||||||| ||||||
Sbjct: 1973 atgtctgtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttact 2032

                                                                      
Query: 66   gttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 123
            |||||||||||||| ||| ||||||||||||| ||| |||  || |||| ||||||||
Sbjct: 2033 gttccctgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 211  ggacagtctcaggtagacagtttc 234
            ||||||||| ||||||||||||||
Sbjct: 2158 ggacagtcttaggtagacagtttc 2181



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  agtgagataccactctggaa 170
            ||||||||||||||||||||
Sbjct: 2106 agtgagataccactctggaa 2125

---

>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  115 bits (58), Expect = 6e-23
 Identities = 104/118 (88%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    atgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagc-tttact 65
            |||||||||||||||| ||||||   |||||||||| |||||||||||||||| ||||||
Sbjct: 1973 atgtctgtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttact 2032

                                                                      
Query: 66   gttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 123
            |||||||||||||| ||| ||||||||||||| ||| |||  || |||| ||||||||
Sbjct: 2033 gttccctgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 211  ggacagtctcaggtagacagtttc 234
            ||||||||| ||||||||||||||
Sbjct: 2158 ggacagtcttaggtagacagtttc 2181



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  agtgagataccactctggaa 170
            ||||||||||||||||||||
Sbjct: 2106 agtgagataccactctggaa 2125

---

>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  115 bits (58), Expect = 6e-23
 Identities = 104/118 (88%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    atgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagc-tttact 65
            |||||||||||||||| ||||||   |||||||||| |||||||||||||||| ||||||
Sbjct: 1973 atgtctgtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttact 2032

                                                                      
Query: 66   gttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 123
            |||||||||||||| ||| ||||||||||||| ||| |||  || |||| ||||||||
Sbjct: 2033 gttccctgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 211  ggacagtctcaggtagacagtttc 234
            ||||||||| ||||||||||||||
Sbjct: 2158 ggacagtcttaggtagacagtttc 2181



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  agtgagataccactctggaa 170
            ||||||||||||||||||||
Sbjct: 2106 agtgagataccactctggaa 2125

---

>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score =  115 bits (58), Expect = 6e-23
 Identities = 104/118 (88%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    atgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagc-tttact 65
            |||||||||||||||| ||||||   |||||||||| |||||||||||||||| ||||||
Sbjct: 1972 atgtctgtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttact 2031

                                                                      
Query: 66   gttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 123
            |||||||||||||| ||| ||||||||||||| ||| |||  || |||| ||||||||
Sbjct: 2032 gttccctgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2089



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 211  ggacagtctcaggtagacagtttc 234
            ||||||||| ||||||||||||||
Sbjct: 2157 ggacagtcttaggtagacagtttc 2180



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  agtgagataccactctggaa 170
            ||||||||||||||||||||
Sbjct: 2105 agtgagataccactctggaa 2124

---

>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  115 bits (58), Expect = 6e-23
 Identities = 104/118 (88%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    atgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagc-tttact 65
            |||||||||||||||| ||||||   |||||||||| |||||||||||||||| ||||||
Sbjct: 1973 atgtctgtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttact 2032

                                                                      
Query: 66   gttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 123
            |||||||||||||| ||| ||||||||||||| ||| |||  || |||| ||||||||
Sbjct: 2033 gttccctgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 211  ggacagtctcaggtagacagtttc 234
            ||||||||| ||||||||||||||
Sbjct: 2158 ggacagtcttaggtagacagtttc 2181



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  agtgagataccactctggaa 170
            ||||||||||||||||||||
Sbjct: 2106 agtgagataccactctggaa 2125

---

>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  115 bits (58), Expect = 6e-23
 Identities = 104/118 (88%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    atgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagc-tttact 65
            |||||||||||||||| ||||||   |||||||||| |||||||||||||||| ||||||
Sbjct: 1973 atgtctgtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttact 2032

                                                                      
Query: 66   gttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 123
            |||||||||||||| ||| ||||||||||||| ||| |||  || |||| ||||||||
Sbjct: 2033 gttccctgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 211  ggacagtctcaggtagacagtttc 234
            ||||||||| ||||||||||||||
Sbjct: 2158 ggacagtcttaggtagacagtttc 2181

---

>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score =  115 bits (58), Expect = 6e-23
 Identities = 104/118 (88%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    atgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagc-tttact 65
            |||||||||||||||| ||||||   |||||||||| |||||||||||||||| ||||||
Sbjct: 1972 atgtctgtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttact 2031

                                                                      
Query: 66   gttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 123
            |||||||||||||| ||| ||||||||||||| ||| |||  || |||| ||||||||
Sbjct: 2032 gttccctgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2089



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 211  ggacagtctcaggtagacagtttc 234
            ||||||||| ||||||||||||||
Sbjct: 2157 ggacagtcttaggtagacagtttc 2180



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  agtgagataccactctggaa 170
            ||||||||||||||||||||
Sbjct: 2105 agtgagataccactctggaa 2124

---

>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  115 bits (58), Expect = 6e-23
 Identities = 104/118 (88%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    atgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagc-tttact 65
            |||||||||||||||| ||||||   |||||||||| |||||||||||||||| ||||||
Sbjct: 1973 atgtctgtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttact 2032

                                                                      
Query: 66   gttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaagg 123
            |||||||||||||| ||| ||||||||||||| ||| |||  || |||| ||||||||
Sbjct: 2033 gttccctgggattgacttggggcctttcctgcacagtttaaatgcaaggagaagaagg 2090



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 211  ggacagtctcaggtagacagtttc 234
            ||||||||| ||||||||||||||
Sbjct: 2158 ggacagtcttaggtagacagtttc 2181



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  agtgagataccactctggaa 170
            ||||||||||||||||||||
Sbjct: 2106 agtgagataccactctggaa 2125

---

>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL),
            site-specific DNA endonuclease I-CkoI genes
          Length = 5105

 Score =  115 bits (58), Expect = 6e-23
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  | |
Sbjct: 4247 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 4306

                                                              
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaag 122
            || ||||| || |||| |||| |||||||| ||||||| |||||| ||||
Sbjct: 4307 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggcgatgaag 4356



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            ||||||||||||||| |||||||||||||||||
Sbjct: 4377 gagccatcagtgagagaccactctggaagagct 4409

---

>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 5575

 Score =  115 bits (58), Expect = 6e-23
 Identities = 135/163 (82%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            |||||||||||||||||||  |||||||||||||||||||||||||||| |||||  |||
Sbjct: 2902 gtgaagatgcggactacctatacctggacagaaagaccctatgaagcttgactgtatcct 2961

                                                                        
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 132
            || ||||| || |||| |||| |||||||| ||||||| |||| | |||||  |||||||
Sbjct: 2962 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggctatgaaggttcccttcc 3021

                                                       
Query: 133  nnnnnnncccgagccatcagtgagataccactctggaagagct 175
                      ||||||||| ||||| |||||||||||||||||
Sbjct: 3022 gggggaatttgagccatcattgagagaccactctggaagagct 3064

---

>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 3397

 Score =  115 bits (58), Expect = 6e-23
 Identities = 135/163 (82%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||  |||
Sbjct: 2321 gtgaagatgcggactacctacacttggacagaaagaccctatgaagcttgactgtatcct 2380

                                                                        
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 132
            || ||||| || |||| |||| |||||||| ||||||| |||| | |||||  |||||||
Sbjct: 2381 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggctatgaaggttcccttcc 2440

                                                       
Query: 133  nnnnnnncccgagccatcagtgagataccactctggaagagct 175
                      ||||||||| ||||| |||||||||||||||||
Sbjct: 2441 gggggaatttgagccatcattgagagaccactctggaagagct 2483

---

>emb|X68924.1|CHCSRRNX2 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 2
          Length = 1291

 Score =  115 bits (58), Expect = 6e-23
 Identities = 135/163 (82%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            |||||||||||||||||||  |||||||||||||||||||||||||||| |||||  |||
Sbjct: 1055 gtgaagatgcggactacctatacctggacagaaagaccctatgaagcttgactgtatcct 1114

                                                                        
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaaggcccccttcc 132
            || ||||| || |||| |||| |||||||| ||||||| |||| | |||||  |||||||
Sbjct: 1115 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggctatgaaggttcccttcc 1174

                                                       
Query: 133  nnnnnnncccgagccatcagtgagataccactctggaagagct 175
                      ||||||||| ||||| |||||||||||||||||
Sbjct: 1175 gggggaatttgagccatcattgagagaccactctggaagagct 1217

---

>emb|X68929.1|CHCKRRNL3 Chloroplast Chlamydomonas komma rrnL gene, exon 3
          Length = 955

 Score =  115 bits (58), Expect = 6e-23
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
           ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  | |
Sbjct: 97  gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 156

                                                             
Query: 73  gggattggctttgggcctttcctgcgcagcttaggtggaaggcgaagaag 122
           || ||||| || |||| |||| |||||||| ||||||| |||||| ||||
Sbjct: 157 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggcgatgaag 206



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 143 gagccatcagtgagataccactctggaagagct 175
           ||||||||||||||| |||||||||||||||||
Sbjct: 227 gagccatcagtgagagaccactctggaagagct 259

---

>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial
            sequence
          Length = 2364

 Score =  113 bits (57), Expect = 2e-22
 Identities = 69/73 (94%)
 Strand = Plus / Plus

                                                                        
Query: 8    tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1554 tgtctgtgaagatacggactacctgcacctggacagaaagaccctatgaagctttactgt 1613

                         
Query: 68   tccctgggattgg 80
              ||||| |||||
Sbjct: 1614 agcctggcattgg 1626



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                         
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaacc 187
            ||||| |||||||||||||||||| | || ||| | |||||||||
Sbjct: 1689 gagccgtcagtgagataccactctagcagggctagaattctaacc 1733

---

>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score =  111 bits (56), Expect = 1e-21
 Identities = 84/92 (91%), Gaps = 1/92 (1%)
 Strand = Plus / Plus

                                                                        
Query: 7    atgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagc-tttact 65
            |||||||||||||||| ||||||   |||||||||| |||||||||||||||| ||||||
Sbjct: 1973 atgtctgtgaagatgcagactactcacacctggacaaaaagaccctatgaagcttttact 2032

                                            
Query: 66   gttccctgggattggctttgggcctttcctgc 97
            |||||||||||||| ||| |||||||||||||
Sbjct: 2033 gttccctgggattgacttggggcctttcctgc 2064



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 211  ggacagtctcaggtagacagtttc 234
            ||||||||| ||||||||||||||
Sbjct: 2158 ggacagtcttaggtagacagtttc 2181



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  agtgagataccactctggaa 170
            ||||||||||||||||||||
Sbjct: 2106 agtgagataccactctggaa 2125

---

>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA
            (rrnL) gene
          Length = 3875

 Score =  111 bits (56), Expect = 1e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 2696 atagacatgtccgtgaagatccggactacttgcacctggacagaaagaccctatgaagct 2755

                                                                    
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
            | ||| |  | ||||||||| |||||||| | | |||||||  ||||||| |||||
Sbjct: 2756 tgactataacttgggattgggtttgggccctccttgcgcagtctaggtgggaggcg 2811



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 143  gagccatcagtgagataccactct 166
            ||||||||||||||| ||||||||
Sbjct: 2838 gagccatcagtgagagaccactct 2861

---

>gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 3455

 Score =  111 bits (56), Expect = 1e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  | |
Sbjct: 2275 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 2334

                                                        
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
            || ||||| || |||| |||| |||||||| ||||||| |||||
Sbjct: 2335 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggcg 2378



 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                       
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaa 185
            ||||||||||||||| ||||||||||||||||| | |||||||
Sbjct: 2405 gagccatcagtgagagaccactctggaagagctagaattctaa 2447

---

>gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 3923

 Score =  111 bits (56), Expect = 1e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  | |
Sbjct: 2109 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 2168

                                                        
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
            || ||||| || |||| |||| |||||||| ||||||| |||||
Sbjct: 2169 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggcg 2212



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            ||||||||||||||| |||||||||||||||||
Sbjct: 2239 gagccatcagtgagagaccactctggaagagct 2271

---

>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score =  111 bits (56), Expect = 1e-21
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                           
Query: 8       tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
               ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1660489 tgtctgtgaagatacggactacctgcacccggacagaaagaccctatgaagctttactgt 1660548

                                                               
Query: 68      tccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
                 | ||| |||||||| |||| ||  ||||||||  ||||||| ||||
Sbjct: 1660549 agcttggtattggcttcgggctttgactgcgcaggataggtgggaggc 1660596



 Score =  111 bits (56), Expect = 1e-21
 Identities = 95/108 (87%)
 Strand = Plus / Minus

                                                                           
Query: 8       tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
               ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1048255 tgtctgtgaagatacggactacctgcacccggacagaaagaccctatgaagctttactgt 1048196

                                                               
Query: 68      tccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
                 | ||| |||||||| |||| ||  ||||||||  ||||||| ||||
Sbjct: 1048195 agcttggtattggcttcgggctttgactgcgcaggataggtgggaggc 1048148

---

>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2704

 Score =  111 bits (56), Expect = 1e-21
 Identities = 80/88 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            ||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 2097 atagacatgtccgtgaagatgcggacttcctacacctggacagaaagaccctatgaagct 2156

                                        
Query: 61   ttactgttccctgggattggctttgggc 88
            |||||||  ||||  ||||| |||||||
Sbjct: 2157 ttactgtagcctgaaattgggtttgggc 2184



 Score = 46.1 bits (23), Expect = 0.049
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaa 185
            ||||||||||||||| ||||||||| | ||||| | |||||||
Sbjct: 2239 gagccatcagtgagagaccactctgaaggagctagaattctaa 2281

---

>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions
          Length = 3282

 Score =  111 bits (56), Expect = 1e-21
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                        
Query: 8    tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
            ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2251 tgtctgtgaagatacggactacctgcacccggacagaaagaccctatgaagctttactgt 2310

                                                            
Query: 68   tccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
              | ||| |||||||| |||| ||  ||||||||  ||||||| ||||
Sbjct: 2311 agcttggtattggcttcgggctttgactgcgcaggataggtgggaggc 2358

---

>emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL gene, exon 1
          Length = 2749

 Score =  111 bits (56), Expect = 1e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  | |
Sbjct: 2275 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 2334

                                                        
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
            || ||||| || |||| |||| |||||||| ||||||| |||||
Sbjct: 2335 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggcg 2378



 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                       
Query: 143  gagccatcagtgagataccactctggaagagctcggattctaa 185
            ||||||||||||||| ||||||||||||||||| | |||||||
Sbjct: 2405 gagccatcagtgagagaccactctggaagagctagaattctaa 2447

---

>emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL gene, exon 1
          Length = 2676

 Score =  111 bits (56), Expect = 1e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  | |
Sbjct: 2109 gtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatctt 2168

                                                        
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggcg 116
            || ||||| || |||| |||| |||||||| ||||||| |||||
Sbjct: 2169 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggcg 2212



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            ||||||||||||||| |||||||||||||||||
Sbjct: 2239 gagccatcagtgagagaccactctggaagagct 2271

---

>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score =  111 bits (56), Expect = 1e-21
 Identities = 95/108 (87%)
 Strand = Plus / Minus

                                                                           
Query: 8       tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
               ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2656297 tgtctgtgaagatacggactacctgcacccggacagaaagaccctatgaagctttactgt 2656238

                                                               
Query: 68      tccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
                 | ||| |||||||| |||| ||  ||||||||  ||||||| ||||
Sbjct: 2656237 agcttggtattggcttcgggctttgactgcgcaggataggtgggaggc 2656190



 Score =  111 bits (56), Expect = 1e-21
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                          
Query: 8      tgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
              ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 572624 tgtctgtgaagatacggactacctgcacccggacagaaagaccctatgaagctttactgt 572683

                                                              
Query: 68     tccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
                | ||| |||||||| |||| ||  ||||||||  ||||||| ||||
Sbjct: 572684 agcttggtattggcttcgggctttgactgcgcaggataggtgggaggc 572731

---

>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome
          Length = 149705

 Score =  109 bits (55), Expect = 4e-21
 Identities = 55/55 (100%)
 Strand = Plus / Minus

                                                                    
Query: 13    gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 67
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44070 gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgt 44016



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 143   gagccatcagtgagataccactctg 167
             ||||| |||||||||||||||||||
Sbjct: 43940 gagccgtcagtgagataccactctg 43916

---

>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome
          Length = 151933

 Score =  109 bits (55), Expect = 4e-21
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                          
Query: 1      atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
              |||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 139340 atagacatatctgtgaagatgcggattacctgcacccggacagaaagaccctatgaagct 139399

                                                                     
Query: 61     ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
              | |||||    || |||||| || |||| |||| |||||||| ||||||| ||||
Sbjct: 139400 tgactgtagtttgagattggattcgggcttttcttgcgcagcataggtgggaggc 139454



 Score =  109 bits (55), Expect = 4e-21
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                         
Query: 1     atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
             |||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 46204 atagacatatctgtgaagatgcggattacctgcacccggacagaaagaccctatgaagct 46145

                                                                    
Query: 61    ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
             | |||||    || |||||| || |||| |||| |||||||| ||||||| ||||
Sbjct: 46144 tgactgtagtttgagattggattcgggcttttcttgcgcagcataggtgggaggc 46090



 Score = 46.1 bits (23), Expect = 0.049
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 143    gagccatcagtgagataccactctggaagagctcggattctaa 185
              ||||||||| |||||||||||||| | |||||| | |||||||
Sbjct: 139482 gagccatcattgagataccactctaggagagctagaattctaa 139524



 Score = 46.1 bits (23), Expect = 0.049
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 143   gagccatcagtgagataccactctggaagagctcggattctaa 185
             ||||||||| |||||||||||||| | |||||| | |||||||
Sbjct: 46062 gagccatcattgagataccactctaggagagctagaattctaa 46020

---

>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 4181

 Score =  109 bits (55), Expect = 4e-21
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  | |
Sbjct: 2829 gtgaagatgcggactacttgcacctggacagaaagaccctatgaagcttgactgtatctt 2888

                                                       
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            || ||||| || |||| |||| |||||||| ||||||| ||||
Sbjct: 2889 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggc 2931



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            ||||| ||| ||||| |||||||||||||||||
Sbjct: 2959 gagccgtcattgagagaccactctggaagagct 2991

---

>gb|L43538.1|CRECPRRNLA Chlamydomonas peterfii chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 3498

 Score =  109 bits (55), Expect = 4e-21
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||| | ||||||||||||||||||||||||||||| |||||  | |
Sbjct: 2100 gtgaagatgcggactacttacacctggacagaaagaccctatgaagcttgactgtatctt 2159

                                                       
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            || ||||| ||||||| |||| |||||||| ||||||| ||||
Sbjct: 2160 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggc 2202



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            ||||| ||| ||||| |||||||||||||||||
Sbjct: 2230 gagccgtcattgagagaccactctggaagagct 2262

---

>gb|L44123.1|CMJCPRGOL Chlorococcum echinozygotum chloroplast large-subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-CecI gene
          Length = 7283

 Score =  109 bits (55), Expect = 4e-21
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||  |||
Sbjct: 4368 gtgaagatgcggactacctacacttggacagaaagaccctatgaagcttgactgtatcct 4427

                                                       
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            || ||||| || |||| |||| |||||||| ||||||| ||||
Sbjct: 4428 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggc 4470



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            ||||||||||||||| |||||||||||||||||
Sbjct: 4498 gagccatcagtgagagaccactctggaagagct 4530

---

>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2864

 Score =  109 bits (55), Expect = 4e-21
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1    atagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagct 60
            |||||| |||| |||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 2262 atagacttgtccgtgaagatgcggactacctgtacccggacagaaagaccctatgaagct 2321

                                                                   
Query: 61   ttactgttccctgggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            | |||||  ||||| || || |||||||  ||| |||||||| ||||||| ||||
Sbjct: 2322 tgactgtatcctggaatagggtttgggctcttcttgcgcagcctaggtgggaggc 2376



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            ||||||||| ||||| |||||||||||||||||
Sbjct: 2404 gagccatcattgagagaccactctggaagagct 2436

---

>emb|X68887.1|CHCPRRNL1 Chloroplast Chlamydomonas peterfii rrnL gene, exon 1
          Length = 2668

 Score =  109 bits (55), Expect = 4e-21
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
            ||||||||||||||||| | ||||||||||||||||||||||||||||| |||||  | |
Sbjct: 2100 gtgaagatgcggactacttacacctggacagaaagaccctatgaagcttgactgtatctt 2159

                                                       
Query: 73   gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
            || ||||| ||||||| |||| |||||||| ||||||| ||||
Sbjct: 2160 ggaattgggtttgggcttttcttgcgcagcctaggtgggaggc 2202



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 143  gagccatcagtgagataccactctggaagagct 175
            ||||| ||| ||||| |||||||||||||||||
Sbjct: 2230 gagccgtcattgagagaccactctggaagagct 2262

---

>emb|X68911.1|CHCMRRNL2 Chloroplast Chlamydomonas mexicana rrnL gene, exon 2
          Length = 664

 Score =  109 bits (55), Expect = 4e-21
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccct 72
           ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  | |
Sbjct: 97  gtgaagatgcggactacttgcacctggacagaaagaccctatgaagcttgactgtatctt 156

                                                      
Query: 73  gggattggctttgggcctttcctgcgcagcttaggtggaaggc 115
           || ||||| || |||| |||| |||||||| ||||||| ||||
Sbjct: 157 ggaattgggttcgggcttttcttgcgcagcctaggtgggaggc 199



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 143 gagccatcagtgagataccactctggaagagct 175
           ||||| ||| ||||| |||||||||||||||||
Sbjct: 227 gagccgtcattgagagaccactctggaagagct 259


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,653,588
Number of Sequences: 3902068
Number of extensions: 1653588
Number of successful extensions: 42698
Number of sequences better than 10.0: 528
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 41032
Number of HSP's gapped (non-prelim): 1411
length of query: 234
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 212
effective length of database: 17,147,199,772
effective search space: 3635206351664
effective search space used: 3635206351664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---