ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet74h07 |
|---|---|
| Clone Library Name | barley_pub |
>COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5| Length = 355 Score = 80.5 bits (197), Expect = 1e-15 Identities = 36/64 (56%), Positives = 44/64 (68%) Frame = +1 Query: 136 KPVVGGAYWDVGARACDSCATEAARLFCRADAAFLCAGCDARAHGSGSRHARVWLCEVCE 315 K + GG W AR+CD+C + A +FCR D+AFLC CD R H S +RH RVW+CEVCE Sbjct: 9 KSISGG--WGAAARSCDACKSVTAAVFCRVDSAFLCIACDTRIH-SFTRHERVWVCEVCE 65 Query: 316 HAPA 327 APA Sbjct: 66 QAPA 69 Score = 40.0 bits (92), Expect = 0.001 Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARV 294 C+ C A + C+ADAA LC CDA H + SRH RV Sbjct: 61 CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERV 101
>COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3| Length = 294 Score = 79.7 bits (195), Expect = 2e-15 Identities = 36/55 (65%), Positives = 40/55 (72%), Gaps = 3/55 (5%) Frame = +1 Query: 172 ARACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVCEHAPA 327 +R CDSC + AA LFCRADAAFLC CD + H + SRH RVWLCEVCE APA Sbjct: 5 SRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPA 59 Score = 35.8 bits (81), Expect = 0.028 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARV 294 C+ C A + C+ADAA LC CD H + RH RV Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERV 91
>COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4| Length = 362 Score = 77.0 bits (188), Expect = 1e-14 Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 3/57 (5%) Frame = +1 Query: 166 VGARACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVCEHAPA 327 + ++ CDSC + A L+CR DAAFLC CD++ H + SRHARVW+CEVCE APA Sbjct: 1 MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPA 57 Score = 35.8 bits (81), Expect = 0.028 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARV 294 C+ C A + C+ADAA LC CD H + RH RV Sbjct: 49 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERV 89
>COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1| Length = 355 Score = 67.0 bits (162), Expect = 1e-11 Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 3/55 (5%) Frame = +1 Query: 172 ARACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVCEHAPA 327 A+ACD+C + A ++CRAD+A+LC+ CDA+ H + SRH RV +C+ CE APA Sbjct: 9 AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPA 63 Score = 45.4 bits (106), Expect = 3e-05 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Frame = +1 Query: 175 RACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVCEHA 321 R C SC A FC+ADAA LC CD+ H + RH RV + + E++ Sbjct: 53 RVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYS 104
>COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2| Length = 347 Score = 66.6 bits (161), Expect = 1e-11 Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 3/55 (5%) Frame = +1 Query: 172 ARACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVCEHAPA 327 ARACD+C + A ++C AD+A+LC CDAR H + SRH RV +C+ CE APA Sbjct: 13 ARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPA 67 Score = 43.5 bits (101), Expect = 1e-04 Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = +1 Query: 175 RACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARV 294 R C SC + A C+ADAA LC CDA H + RH RV Sbjct: 57 RVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRV 99
>CONS_ARATH (Q39057) Zinc finger protein CONSTANS| Length = 373 Score = 65.5 bits (158), Expect = 3e-11 Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 3/55 (5%) Frame = +1 Query: 172 ARACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVCEHAPA 327 AR CD+C + A ++C AD+A+LC CDA+ H + SRH RV +CE CE APA Sbjct: 17 ARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPA 71 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Frame = +1 Query: 175 RACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARV 294 R C+SC A C AD A LC CD+ H + RH RV Sbjct: 61 RVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRV 103
>COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11| Length = 330 Score = 51.6 bits (122), Expect = 5e-07 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVCEHAP 324 CD C TE A ++C++D+A LC CD H + RH R LCE C P Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQP 55
>COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10| Length = 373 Score = 51.2 bits (121), Expect = 6e-07 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGSGS---RHARVWLCEVCEHAPA 327 CD C + + ++CR+DAA LC CD H + + RH+R +CE C PA Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPA 56
>COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9| Length = 372 Score = 50.8 bits (120), Expect = 8e-07 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGSGS---RHARVWLCEVCEHAPA 327 CD C + + ++CR+DAA LC CD H + + RH+R +CE C PA Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPA 56
>COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12| Length = 337 Score = 50.4 bits (119), Expect = 1e-06 Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVCEHAPA 327 CD CAT A ++C++D A LC CD H + RH R +CE C PA Sbjct: 5 CDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPA 56
>COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16| Length = 417 Score = 49.7 bits (117), Expect = 2e-06 Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Frame = +1 Query: 172 ARACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWL 300 ARACDSC AR +C AD AFLC CD+ H + RH RV L Sbjct: 14 ARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRL 59
>COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6| Length = 406 Score = 49.3 bits (116), Expect = 2e-06 Identities = 24/46 (52%), Positives = 26/46 (56%), Gaps = 3/46 (6%) Frame = +1 Query: 172 ARACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWL 300 ARACDSC AR +C AD AFLC CD H + RH RV L Sbjct: 14 ARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRL 59
>COLX_ARATH (Q9C9F4) Putative zinc finger protein At1g68190| Length = 356 Score = 48.9 bits (115), Expect = 3e-06 Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Frame = +1 Query: 175 RACDSCATEAARLFCRADAAFLCAGCDARAHGSGS---RHARVWLCEVCEHAP 324 R C+ C A ++C AD A LC CDA+ H + S RH R LC+ C++ P Sbjct: 12 RVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQP 64 Score = 35.8 bits (81), Expect = 0.028 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGSGSRHAR 291 CDSC + + C FLC GC+ + HG GS R Sbjct: 57 CDSCKNQPCVVRCFDHKMFLCHGCNDKFHGGGSSEHR 93
>COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13| Length = 332 Score = 48.5 bits (114), Expect = 4e-06 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Frame = +1 Query: 175 RACDSCATEAARLFCRADAAFLCAGCDARAHGSG---SRHARVWLCEVCEHAPA 327 R CD C + A ++C+AD+A LC CD + H + ++H R LC+ C +P+ Sbjct: 11 RLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPS 64 Score = 36.6 bits (83), Expect = 0.016 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAH-GSGSRHAR 291 CDSC + LFC + + LC CD + H S S H+R Sbjct: 56 CDSCNESPSSLFCETERSVLCQNCDWQHHTASSSLHSR 93
>COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14| Length = 402 Score = 47.0 bits (110), Expect = 1e-05 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Frame = +1 Query: 178 ACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVCEHAP 324 AC+ C A LFCRAD A LC CD H + +H R +C+ C P Sbjct: 11 ACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEP 62 Score = 34.7 bits (78), Expect = 0.061 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +1 Query: 166 VGARACDSCATEAARLFCRADAAFLCAGCDARAHGSGSRHA 288 V ++ CD+C+ E + C D LC CD HGS S A Sbjct: 50 VRSQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSA 90
>COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15| Length = 433 Score = 46.6 bits (109), Expect = 2e-05 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWLCEVCEHAP 324 CD C A LFCRAD A LC CD + H + +H R +C+ C + P Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEP 59 Score = 34.3 bits (77), Expect = 0.080 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +1 Query: 166 VGARACDSCATEAARLFCRADAAFLCAGCDARAHGSGS 279 V ++ CD+C E + C D LC CD HGS S Sbjct: 47 VRSQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCS 84
>STHX_ARATH (Q9LQZ7) Putative salt tolerance-like protein At1g75540| Length = 331 Score = 42.7 bits (99), Expect = 2e-04 Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 15/64 (23%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVW------------LCEVCE 315 CD C E A +FC AD A LC GCD + H + S+H R LC++C+ Sbjct: 5 CDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQ 64 Query: 316 HAPA 327 A Sbjct: 65 DKKA 68 Score = 37.4 bits (85), Expect = 0.009 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGSG---SRHARVWLCEV 309 CD C + A LFC+ D A LC CD+ H + +H R L V Sbjct: 60 CDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGV 105
>COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7| Length = 392 Score = 42.0 bits (97), Expect = 4e-04 Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 4/49 (8%) Frame = +1 Query: 166 VGARACDSCATEA-ARLFCRADAAFLCAGCDARAHGS---GSRHARVWL 300 + AR CD+C + A +C AD AFLC CDA H + RH RV L Sbjct: 17 MAARGCDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRL 65
>STH_ARATH (Q9SID1) Salt tolerance-like protein| Length = 238 Score = 40.8 bits (94), Expect = 9e-04 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 12/56 (21%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWL---------CEVC 312 CD C A L C AD A LCA CD H + S+H R++L C++C Sbjct: 5 CDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60 Score = 38.5 bits (88), Expect = 0.004 Identities = 16/36 (44%), Positives = 19/36 (52%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGSGSRHA 288 CD C +AA +FC D A LC CD H +R A Sbjct: 57 CDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSA 92
>STO_ARATH (Q96288) Salt-tolerance protein| Length = 248 Score = 38.9 bits (89), Expect = 0.003 Identities = 17/36 (47%), Positives = 20/36 (55%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGSGSRHA 288 CD C +AA +FC D A LC CD H + SR A Sbjct: 57 CDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSA 92 Score = 37.4 bits (85), Expect = 0.009 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 12/61 (19%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWL---------CEVCEHAP 324 CD C A + C AD A LC CD H + S+H R+ L C++C+ Sbjct: 5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKA 64 Query: 325 A 327 A Sbjct: 65 A 65
>COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8| Length = 313 Score = 38.1 bits (87), Expect = 0.006 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Frame = +1 Query: 175 RACDSCATEAARLFCRADAAFLCAGCDARAHGS---GSRHARVWL 300 RAC+ C + A +C +D AFLC CD H + ++H RV L Sbjct: 13 RACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCL 57
>FTSK_SALTY (Q8ZQD5) DNA translocase ftsK| Length = 1351 Score = 31.6 bits (70), Expect = 0.52 Identities = 18/55 (32%), Positives = 24/55 (43%) Frame = -2 Query: 314 SQTSQSQTRAWRDPEPCARASQPAQRNAASARQKSLAASVAHESHALAPTSQ*AP 150 +Q ++Q+ W+ P P A A Q A A +A SLA PT Q P Sbjct: 385 AQPQEAQSAPWQQPVPVASAPQYAATPATAAEYDSLAPQETQPQWQPEPTHQPTP 439
>STHY_ARATH (Q9SYM2) Putative salt tolerance-like protein At1g78600| Length = 299 Score = 31.2 bits (69), Expect = 0.68 Identities = 12/29 (41%), Positives = 13/29 (44%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAH 267 CD C + FC D A LC CD H Sbjct: 57 CDICQEASGFFFCLQDRALLCRKCDVAIH 85
>VMTH_LAMBD (P03736) Minor tail protein H [Contains: Minor tail protein H*]| Length = 853 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -2 Query: 326 AGACSQTSQSQTRAWRDPEPCARASQPAQRNAASARQKSLAASVAHESHAL 174 AGA + SQ + W+ A + AQR SA++KSL +AH+ L Sbjct: 489 AGANEKISQQRRDLWKAESQFAVLEEAAQRRQLSAQEKSL---LAHKDETL 536
>NR2F1_BRARE (Q06725) Nuclear receptor Nr2f1 (Steroid receptor homolog SVP 44)| Length = 411 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -2 Query: 284 WRDPEPCARASQPAQRNAAS--ARQKSLAASVAHESHALAPTSQ*APPTT 141 WRDP+ P+ N A+ AR++ AAS A H SQ PP+T Sbjct: 8 WRDPQEDVAGGPPSGPNPAAQPAREQQQAASAA--PHTPQTPSQPGPPST 55
>DLEC1_HUMAN (Q9Y238) Deleted in lung and esophageal cancer protein 1 (Deleted| in lung cancer protein 1) (DLC-1) Length = 1755 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = -2 Query: 314 SQTSQSQTRAWRDPEPCARASQPAQRNAASARQKSLAASVA-HESHALAP 168 S+T++ Q W P A +S P+Q S+ SLA S A H S A P Sbjct: 14 SRTNECQGTMWAPTSPPAGSSSPSQPTWKSSLYSSLAYSEAFHYSFAARP 63
>NTRY_AZOBR (P45675) Nitrogen regulation protein ntrY homolog (EC 2.7.13.3)| Length = 777 Score = 28.9 bits (63), Expect = 3.4 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = -2 Query: 260 RASQPAQRNAASARQKSLAASVAHESHALAPTSQ*APP 147 R PAQR AA AR++ +AAS + L P A P Sbjct: 504 RTWSPAQRKAAWARRRPIAASPTRVKNPLTPIQLSAEP 541
>TRI32_HUMAN (Q13049) Tripartite motif protein 32 (EC 6.3.2.-) (Zinc-finger| protein HT2A) (72 kDa Tat-interacting protein) Length = 653 Score = 28.9 bits (63), Expect = 3.4 Identities = 13/34 (38%), Positives = 14/34 (41%) Frame = +1 Query: 166 VGARACDSCATEAARLFCRADAAFLCAGCDARAH 267 VG C SC R FCR+ LC C H Sbjct: 95 VGLLMCRSCGRRLPRQFCRSCGLVLCEPCREADH 128
>FTSZ2_ARCFU (O29685) Cell division protein ftsZ homolog 2| Length = 392 Score = 28.5 bits (62), Expect = 4.4 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 Query: 151 GAYWDVGARACDSCATEAARLFCRADAAFLCAGCDARAHGSGS 279 G Y ++G +A + L C +D F+CAG G+GS Sbjct: 90 GGYPEIGRKAAELARNVLEDLLCDSDMVFVCAGMGG-GTGTGS 131
>FTSK_SALTI (Q8Z814) DNA translocase ftsK| Length = 1343 Score = 28.5 bits (62), Expect = 4.4 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -2 Query: 314 SQTSQSQTRAWRDPEPCARASQPAQRNAASARQKSLA 204 +Q ++Q+ W+ P P A A Q A A +A SLA Sbjct: 385 AQPQEAQSAPWQQPVPVASAPQYAATPATAAEYDSLA 421
>GAP_CAEEL (P34288) GTPase-activating protein GAP (CeGAP)| Length = 1317 Score = 28.1 bits (61), Expect = 5.7 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 5/61 (8%) Frame = -2 Query: 326 AGACS-QTSQSQTRAWRDPEPCAR--ASQPAQR--NAASARQKSLAASVAHESHALAPTS 162 A AC+ Q + S A DP PCAR ++ PA R N A + + A S + +SH S Sbjct: 1168 AVACADQPNSSSDYASSDPSPCARNPSTSPASRPSNLAISPAQLHATSSSGQSHQPMSRS 1227 Query: 161 Q 159 Q Sbjct: 1228 Q 1228
>TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12)| Length = 1992 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/60 (23%), Positives = 33/60 (55%) Frame = -2 Query: 326 AGACSQTSQSQTRAWRDPEPCARASQPAQRNAASARQKSLAASVAHESHALAPTSQ*APP 147 +G+ S+++ ++ R+ + + ++++ A+ ++ S AAS + S A+A S PP Sbjct: 159 SGSGSESTGAEERSAKPTKLASKSATSAKAGCSTITDSSSAASTSSSSSAVASASSTVPP 218
>SPTN4_HUMAN (Q9H254) Spectrin beta chain, brain 3 (Spectrin, non-erythroid beta| chain 3) (Beta-IV spectrin) Length = 2564 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +3 Query: 21 AERKSLAESRLLTAANHGGGAGASCACRTVSACH 122 AE + + RLL AA GG AGA+ A T H Sbjct: 656 AESWARDKERLLEAAGGGGAAGAAGAAGTAGGAH 689
>TRI32_MOUSE (Q8CH72) Tripartite motif protein 32 (EC 6.3.2.-)| Length = 655 Score = 27.7 bits (60), Expect = 7.5 Identities = 12/34 (35%), Positives = 13/34 (38%) Frame = +1 Query: 166 VGARACDSCATEAARLFCRADAAFLCAGCDARAH 267 VG C C R FCR+ LC C H Sbjct: 96 VGLLMCRGCGRRLPRQFCRSCGVVLCEPCREADH 129
>ARD1_MOUSE (Q8BGX0) GTP-binding protein ARD-1 (ADP-ribosylation factor domain| protein 1) (Tripartite motif protein 23) Length = 574 Score = 27.3 bits (59), Expect = 9.8 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAFLCAGCDARAHGSG--SRHARVWLCE 306 CD A ++C A LC+ C H + ++H RV L + Sbjct: 127 CDEDEAHVASVYCTVCATHLCSDCSQVTHSTKTLAKHRRVPLAD 170
>Y004_MYCPA (Q9L7L4) UPF0232 protein MAP_0004| Length = 181 Score = 27.3 bits (59), Expect = 9.8 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -2 Query: 296 QTRAWRDPEPCARASQPAQRNAAS-ARQKSLAASVA 192 Q R+W P P AR QP R A AR++ +A VA Sbjct: 53 QRRSWSGPGPDARDPQPLGRLARDLARKRGWSAQVA 88
>HGD_RHOPA (Q6N0T9) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 448 Score = 27.3 bits (59), Expect = 9.8 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -1 Query: 195 GARIARPRAHVPVGSADHRLLLPLHGTRSQFDKRS 91 G A+P+ VP G++ H ++LP R FD S Sbjct: 359 GVYDAKPQGFVPGGASLHNMMLPHGPDREAFDHAS 393
>CPB3_CAERE (Q6E3D4) Cytoplasmic polyadenylation element-binding protein 3| Length = 766 Score = 27.3 bits (59), Expect = 9.8 Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%) Frame = +1 Query: 181 CDSCATEAARLFCRADAAF--LCAGCDARAHGSG 276 C C TE A FCR F C C A HG G Sbjct: 528 CMVCTTELAHCFCRNRNCFKYYCHTCWAVDHGHG 561 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,294,900 Number of Sequences: 219361 Number of extensions: 464159 Number of successful extensions: 1600 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 1533 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1587 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
