ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet74h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF490475.1| Hordeum vulgare subsp. vulgare cultivar Morex CON... 599 e-168
2gb|AF490474.1| Hordeum vulgare subsp. vulgare cultivar Igri CONS... 402 e-109
3ref|XM_473042.1| Oryza sativa (japonica cultivar-group), predic... 182 5e-43
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 182 5e-43
5dbj|AK121024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 5e-43
6emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 182 5e-43
7ref|XM_506861.1| PREDICTED Oryza sativa (japonica cultivar-group... 141 2e-30
8ref|XM_466669.1| Oryza sativa (japonica cultivar-group), mRNA 141 2e-30
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
10dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
11dbj|AK100097.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 2e-30
12dbj|AK058536.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 2e-30
13gb|AY082958.1| Hordeum vulgare CONSTANS-like protein CO5 (CO5) g... 139 6e-30
14gb|AF052585.1|AF052585 Malus domestica cultivar Fuji CONSTANS-li... 60 5e-06
15ref|NM_201801.1| Arabidopsis thaliana zinc ion binding AT2G24790... 54 3e-04
16ref|NM_128038.2| Arabidopsis thaliana transcription factor/ zinc... 54 3e-04
17gb|AY140103.1| Arabidopsis thaliana CONSTANS-like B-box zinc fin... 54 3e-04
18gb|AC007266.5| Arabidopsis thaliana chromosome 2 clone F27A10 ma... 54 3e-04
19gb|AC006585.8| Arabidopsis thaliana chromosome 2 clone F27C12 ma... 54 3e-04
20gb|AY058130.1| Arabidopsis thaliana At2g24790/F27A10.10 mRNA, co... 54 3e-04
21emb|BX819991.1|CNS0A8F5 Arabidopsis thaliana Full-length cDNA Co... 54 3e-04
22emb|BX819670.1|CNS0A8GB Arabidopsis thaliana Full-length cDNA Co... 54 3e-04
23emb|BX841997.1|CNS09YA6 Arabidopsis thaliana Full-length cDNA Co... 54 3e-04
24gb|BT002107.1| Arabidopsis thaliana CONSTANS-like B-box zinc fin... 54 3e-04
25gb|AF052584.1|AF052584 Malus domestica cultivar Fuji CONSTANS-li... 52 0.001
26dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.070
27emb|BX842081.1|CNS09Y9F Arabidopsis thaliana Full-length cDNA Co... 46 0.070
28gb|AY085729.1| Arabidopsis thaliana clone 17434 mRNA, complete s... 46 0.070
29dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.070
30ref|XM_313005.2| Anopheles gambiae str. PEST ENSANGP00000020427 ... 46 0.070
31gb|AF490468.1| Hordeum vulgare subsp. vulgare cultivar Morex CON... 44 0.28
32gb|AF490467.1| Hordeum vulgare subsp. vulgare cultivar Igri CONS... 44 0.28
33gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
34ref|XM_475261.1| Oryza sativa (japonica cultivar-group), predic... 42 1.1
35gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 42 1.1
36gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
37gb|AC123949.5| Mus musculus BAC clone RP23-119H13 from 14, compl... 42 1.1
38gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 42 1.1
39dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
40gb|AF186384.1|AF186384 Coprinus cinereus Rcb2.42 (rcb2.42) gene,... 42 1.1
41dbj|AK106696.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
42gb|AC140393.3| Mus musculus BAC clone RP24-179D17 from 14, compl... 42 1.1
43dbj|AP004513.1| Lotus japonicus genomic DNA, chromosome 5, clone... 42 1.1
44gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 4.3
45ref|NM_186278.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.3
46ref|XM_472742.1| Oryza sativa (japonica cultivar-group), predic... 40 4.3
47gb|AC146938.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
48gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosom... 40 4.3
49gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 4.3
50ref|XM_878193.1| PREDICTED: Bos taurus similar to Insulin gene e... 40 4.3
51ref|XM_878158.1| PREDICTED: Bos taurus similar to Insulin gene e... 40 4.3
52ref|XM_866282.1| PREDICTED: Bos taurus similar to Insulin gene e... 40 4.3
53gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 4.3
54ref|XM_824617.1| Trypanosoma brucei TREU927 hypothetical protein... 40 4.3
55gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 4.3
56emb|AL137026.21| Human DNA sequence from clone RP11-20J15 on chr... 40 4.3
57emb|AL035404.20|HS144F13 Human DNA sequence from clone RP1-144F1... 40 4.3
58emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete ... 40 4.3
59emb|BX640423.1| Bordetella parapertussis strain 12822, complete ... 40 4.3
60emb|BX640422.1| Bordetella pertussis strain Tohama I, complete g... 40 4.3
61emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genom... 40 4.3
62emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 4.3
63emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4,... 40 4.3
64gb|AF262220.2|AF262220 Streptomyces venezuelae chloramphenicol b... 40 4.3
65dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
66dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
67gb|AC123764.18| Homo sapiens chromosome 17, clone CTC-784N20, co... 40 4.3
68gb|AC127515.9| Homo sapiens chromosome 17, clone RP13-63C9, comp... 40 4.3
69gb|AC087741.18| Homo sapiens chromosome 17, clone RP11-334C17, c... 40 4.3
70dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.3
71dbj|AB116234.1| Streptomyces venezuelae papA, papC, papB, ORFIV ... 40 4.3
72gb|AY949772.1| Ovis aries ISL1 transcription factor (islet-1) mR... 40 4.3
73dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
74gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
75gb|U21728.1|SVU21728 Streptomyces venezuelae p-aminobenzoic acid... 40 4.3 
>gb|AF490475.1| Hordeum vulgare subsp. vulgare cultivar Morex CONSTANS-like protein
           (CO4) mRNA, complete cds
          Length = 1230

 Score =  599 bits (302), Expect = e-168
 Identities = 305/306 (99%)
 Strand = Plus / Plus

                                                                       
Query: 22  ccgagcgaaaaagcttggctgagagtcgcctgctcactgcagccaatcacggcggtggcg 81
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ccgagcgaaaaagcttggctgagagtcgcctgctcactgcagccaatcacggcggtggcg 60

                                                                       
Query: 82  ctggtgctagctgcgcttgtcgaactgtgagcgcgtgccatggagggggaggagaagccg 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggtgctagctgcgcttgtcgaactgtgagcgcgtgccatggagggggaggagaagccg 120

                                                                       
Query: 142 gtggtcggcggagcctactgggacgtgggcgcgagggcgtgcgattcgtgcgccaccgag 201
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtggtcggcggagcctactggggcgtgggcgcgagggcgtgcgattcgtgcgccaccgag 180

                                                                       
Query: 202 gcggccaggctcttctgccgcgccgacgccgcgttcctctgcgccggctgcgacgcgcgc 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcggccaggctcttctgccgcgccgacgccgcgttcctctgcgccggctgcgacgcgcgc 240

                                                                       
Query: 262 gcgcacggctccgggtcgcgccacgcccgggtctggctctgcgaggtctgcgagcacgcg 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcgcacggctccgggtcgcgccacgcccgggtctggctctgcgaggtctgcgagcacgcg 300

                 
Query: 322 cccgcg 327
           ||||||
Sbjct: 301 cccgcg 306
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>gb|AF490474.1| Hordeum vulgare subsp. vulgare cultivar Igri CONSTANS-like protein
           (CO4) gene, complete cds
          Length = 1085

 Score =  402 bits (203), Expect = e-109
 Identities = 206/207 (99%)
 Strand = Plus / Plus

                                                                       
Query: 121 atggagggggaggagaagccggtggtcggcggagcctactgggacgtgggcgcgagggcg 180
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1   atggagggggaggagaagccggtggtcggcggagcctactggggcgtgggcgcgagggcg 60

                                                                       
Query: 181 tgcgattcgtgcgccaccgaggcggccaggctcttctgccgcgccgacgccgcgttcctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgcgattcgtgcgccaccgaggcggccaggctcttctgccgcgccgacgccgcgttcctc 120

                                                                       
Query: 241 tgcgccggctgcgacgcgcgcgcgcacggctccgggtcgcgccacgcccgggtctggctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcgccggctgcgacgcgcgcgcgcacggctccgggtcgcgccacgcccgggtctggctc 180

                                      
Query: 301 tgcgaggtctgcgagcacgcgcccgcg 327
           |||||||||||||||||||||||||||
Sbjct: 181 tgcgaggtctgcgagcacgcgcccgcg 207
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>ref|XM_473042.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1002

 Score =  182 bits (92), Expect = 5e-43
 Identities = 140/156 (89%)
 Strand = Plus / Plus

                                                                       
Query: 172 gcgagggcgtgcgattcgtgcgccaccgaggcggccaggctcttctgccgcgccgacgcc 231
           ||||||||||||||  |||||| |   ||||||||  |||| ||||||||||||||||| 
Sbjct: 55  gcgagggcgtgcgacgcgtgcggcggggaggcggcgcggctgttctgccgcgccgacgcg 114

                                                                       
Query: 232 gcgttcctctgcgccggctgcgacgcgcgcgcgcacggctccgggtcgcgccacgcccgg 291
           ||||||||||||||||| ||||||||||| ||||||||  |||||||||||||||| |||
Sbjct: 115 gcgttcctctgcgccgggtgcgacgcgcgggcgcacgggcccgggtcgcgccacgcgcgg 174

                                               
Query: 292 gtctggctctgcgaggtctgcgagcacgcgcccgcg 327
           || |||||||||||||||||||||||||||||||||
Sbjct: 175 gtgtggctctgcgaggtctgcgagcacgcgcccgcg 210
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  182 bits (92), Expect = 5e-43
 Identities = 140/156 (89%)
 Strand = Plus / Plus

                                                                            
Query: 172      gcgagggcgtgcgattcgtgcgccaccgaggcggccaggctcttctgccgcgccgacgcc 231
                ||||||||||||||  |||||| |   ||||||||  |||| ||||||||||||||||| 
Sbjct: 24865398 gcgagggcgtgcgacgcgtgcggcggggaggcggcgcggctgttctgccgcgccgacgcg 24865457

                                                                            
Query: 232      gcgttcctctgcgccggctgcgacgcgcgcgcgcacggctccgggtcgcgccacgcccgg 291
                ||||||||||||||||| ||||||||||| ||||||||  |||||||||||||||| |||
Sbjct: 24865458 gcgttcctctgcgccgggtgcgacgcgcgggcgcacgggcccgggtcgcgccacgcgcgg 24865517

                                                    
Query: 292      gtctggctctgcgaggtctgcgagcacgcgcccgcg 327
                || |||||||||||||||||||||||||||||||||
Sbjct: 24865518 gtgtggctctgcgaggtctgcgagcacgcgcccgcg 24865553



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 40/46 (86%), Gaps = 3/46 (6%)
 Strand = Plus / Minus

                                                              
Query: 216      ctgccgcgccgacgccgcgttcctctgcgccggctgcgacgcgcgc 261
                ||||||||||||||||||   ||||||||||| || || |||||||
Sbjct: 22900848 ctgccgcgccgacgccgc---cctctgcgccgcctccgccgcgcgc 22900806
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>dbj|AK121024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049O11, full
           insert sequence
          Length = 1396

 Score =  182 bits (92), Expect = 5e-43
 Identities = 140/156 (89%)
 Strand = Plus / Plus

                                                                       
Query: 172 gcgagggcgtgcgattcgtgcgccaccgaggcggccaggctcttctgccgcgccgacgcc 231
           ||||||||||||||  |||||| |   ||||||||  |||| ||||||||||||||||| 
Sbjct: 181 gcgagggcgtgcgacgcgtgcggcggggaggcggcgcggctgttctgccgcgccgacgcg 240

                                                                       
Query: 232 gcgttcctctgcgccggctgcgacgcgcgcgcgcacggctccgggtcgcgccacgcccgg 291
           ||||||||||||||||| ||||||||||| ||||||||  |||||||||||||||| |||
Sbjct: 241 gcgttcctctgcgccgggtgcgacgcgcgggcgcacgggcccgggtcgcgccacgcgcgg 300

                                               
Query: 292 gtctggctctgcgaggtctgcgagcacgcgcccgcg 327
           || |||||||||||||||||||||||||||||||||
Sbjct: 301 gtgtggctctgcgaggtctgcgagcacgcgcccgcg 336
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>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
              complete sequence
          Length = 170765

 Score =  182 bits (92), Expect = 5e-43
 Identities = 140/156 (89%)
 Strand = Plus / Plus

                                                                          
Query: 172    gcgagggcgtgcgattcgtgcgccaccgaggcggccaggctcttctgccgcgccgacgcc 231
              ||||||||||||||  |||||| |   ||||||||  |||| ||||||||||||||||| 
Sbjct: 127114 gcgagggcgtgcgacgcgtgcggcggggaggcggcgcggctgttctgccgcgccgacgcg 127173

                                                                          
Query: 232    gcgttcctctgcgccggctgcgacgcgcgcgcgcacggctccgggtcgcgccacgcccgg 291
              ||||||||||||||||| ||||||||||| ||||||||  |||||||||||||||| |||
Sbjct: 127174 gcgttcctctgcgccgggtgcgacgcgcgggcgcacgggcccgggtcgcgccacgcgcgg 127233

                                                  
Query: 292    gtctggctctgcgaggtctgcgagcacgcgcccgcg 327
              || |||||||||||||||||||||||||||||||||
Sbjct: 127234 gtgtggctctgcgaggtctgcgagcacgcgcccgcg 127269
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>ref|XM_506861.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1476_F05.18
           mRNA
          Length = 1388

 Score =  141 bits (71), Expect = 2e-30
 Identities = 131/151 (86%)
 Strand = Plus / Plus

                                                                       
Query: 176 gggcgtgcgattcgtgcgccaccgaggcggccaggctcttctgccgcgccgacgccgcgt 235
           |||||||||| ||||||| |   ||||||||  |||||| ||||||||| ||||  ||||
Sbjct: 190 gggcgtgcgactcgtgcggcggggaggcggcgcggctctactgccgcgcggacggggcgt 249

                                                                       
Query: 236 tcctctgcgccggctgcgacgcgcgcgcgcacggctccgggtcgcgccacgcccgggtct 295
           |||| |||||| | ||||||||||| ||||||||| |||||||||||||||| ||||| |
Sbjct: 250 tcctgtgcgcccggtgcgacgcgcgggcgcacggcgccgggtcgcgccacgcgcgggtgt 309

                                          
Query: 296 ggctctgcgaggtctgcgagcacgcgcccgc 326
           |||| |||||||| |||||||||||||||||
Sbjct: 310 ggctgtgcgaggtgtgcgagcacgcgcccgc 340
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>ref|XM_466669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1386

 Score =  141 bits (71), Expect = 2e-30
 Identities = 131/151 (86%)
 Strand = Plus / Plus

                                                                       
Query: 176 gggcgtgcgattcgtgcgccaccgaggcggccaggctcttctgccgcgccgacgccgcgt 235
           |||||||||| ||||||| |   ||||||||  |||||| ||||||||| ||||  ||||
Sbjct: 192 gggcgtgcgactcgtgcggcggggaggcggcgcggctctactgccgcgcggacggggcgt 251

                                                                       
Query: 236 tcctctgcgccggctgcgacgcgcgcgcgcacggctccgggtcgcgccacgcccgggtct 295
           |||| |||||| | ||||||||||| ||||||||| |||||||||||||||| ||||| |
Sbjct: 252 tcctgtgcgcccggtgcgacgcgcgggcgcacggcgccgggtcgcgccacgcgcgggtgt 311

                                          
Query: 296 ggctctgcgaggtctgcgagcacgcgcccgc 326
           |||| |||||||| |||||||||||||||||
Sbjct: 312 ggctgtgcgaggtgtgcgagcacgcgcccgc 342
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  141 bits (71), Expect = 2e-30
 Identities = 131/151 (86%)
 Strand = Plus / Plus

                                                                            
Query: 176      gggcgtgcgattcgtgcgccaccgaggcggccaggctcttctgccgcgccgacgccgcgt 235
                |||||||||| ||||||| |   ||||||||  |||||| ||||||||| ||||  ||||
Sbjct: 24009385 gggcgtgcgactcgtgcggcggggaggcggcgcggctctactgccgcgcggacggggcgt 24009444

                                                                            
Query: 236      tcctctgcgccggctgcgacgcgcgcgcgcacggctccgggtcgcgccacgcccgggtct 295
                |||| |||||| | ||||||||||| ||||||||| |||||||||||||||| ||||| |
Sbjct: 24009445 tcctgtgcgcccggtgcgacgcgcgggcgcacggcgccgggtcgcgccacgcgcgggtgt 24009504

                                               
Query: 296      ggctctgcgaggtctgcgagcacgcgcccgc 326
                |||| |||||||| |||||||||||||||||
Sbjct: 24009505 ggctgtgcgaggtgtgcgagcacgcgcccgc 24009535
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>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1476_F05
          Length = 125426

 Score =  141 bits (71), Expect = 2e-30
 Identities = 131/151 (86%)
 Strand = Plus / Plus

                                                                         
Query: 176   gggcgtgcgattcgtgcgccaccgaggcggccaggctcttctgccgcgccgacgccgcgt 235
             |||||||||| ||||||| |   ||||||||  |||||| ||||||||| ||||  ||||
Sbjct: 44423 gggcgtgcgactcgtgcggcggggaggcggcgcggctctactgccgcgcggacggggcgt 44482

                                                                         
Query: 236   tcctctgcgccggctgcgacgcgcgcgcgcacggctccgggtcgcgccacgcccgggtct 295
             |||| |||||| | ||||||||||| ||||||||| |||||||||||||||| ||||| |
Sbjct: 44483 tcctgtgcgcccggtgcgacgcgcgggcgcacggcgccgggtcgcgccacgcgcgggtgt 44542

                                            
Query: 296   ggctctgcgaggtctgcgagcacgcgcccgc 326
             |||| |||||||| |||||||||||||||||
Sbjct: 44543 ggctgtgcgaggtgtgcgagcacgcgcccgc 44573
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>dbj|AK100097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004D12, full
           insert sequence
          Length = 1386

 Score =  141 bits (71), Expect = 2e-30
 Identities = 131/151 (86%)
 Strand = Plus / Plus

                                                                       
Query: 176 gggcgtgcgattcgtgcgccaccgaggcggccaggctcttctgccgcgccgacgccgcgt 235
           |||||||||| ||||||| |   ||||||||  |||||| ||||||||| ||||  ||||
Sbjct: 192 gggcgtgcgactcgtgcggcggggaggcggcgcggctctactgccgcgcggacggggcgt 251

                                                                       
Query: 236 tcctctgcgccggctgcgacgcgcgcgcgcacggctccgggtcgcgccacgcccgggtct 295
           |||| |||||| | ||||||||||| ||||||||| |||||||||||||||| ||||| |
Sbjct: 252 tcctgtgcgcccggtgcgacgcgcgggcgcacggcgccgggtcgcgccacgcgcgggtgt 311

                                          
Query: 296 ggctctgcgaggtctgcgagcacgcgcccgc 326
           |||| |||||||| |||||||||||||||||
Sbjct: 312 ggctgtgcgaggtgtgcgagcacgcgcccgc 342
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>dbj|AK058536.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-B01, full
           insert sequence
          Length = 1388

 Score =  141 bits (71), Expect = 2e-30
 Identities = 131/151 (86%)
 Strand = Plus / Plus

                                                                       
Query: 176 gggcgtgcgattcgtgcgccaccgaggcggccaggctcttctgccgcgccgacgccgcgt 235
           |||||||||| ||||||| |   ||||||||  |||||| ||||||||| ||||  ||||
Sbjct: 190 gggcgtgcgactcgtgcggcggggaggcggcgcggctctactgccgcgcggacggggcgt 249

                                                                       
Query: 236 tcctctgcgccggctgcgacgcgcgcgcgcacggctccgggtcgcgccacgcccgggtct 295
           |||| |||||| | ||||||||||| ||||||||| |||||||||||||||| ||||| |
Sbjct: 250 tcctgtgcgcccggtgcgacgcgcgggcgcacggcgccgggtcgcgccacgcgcgggtgt 309

                                          
Query: 296 ggctctgcgaggtctgcgagcacgcgcccgc 326
           |||| |||||||| |||||||||||||||||
Sbjct: 310 ggctgtgcgaggtgtgcgagcacgcgcccgc 340
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>gb|AY082958.1| Hordeum vulgare CONSTANS-like protein CO5 (CO5) gene, complete cds
          Length = 1060

 Score =  139 bits (70), Expect = 6e-30
 Identities = 85/90 (94%)
 Strand = Plus / Plus

                                                                       
Query: 237 cctctgcgccggctgcgacgcgcgcgcgcacggctccgggtcgcgccacgcccgggtctg 296
           |||||||||||| ||||||||||||||||||||| |||| ||||||||||| || |||||
Sbjct: 144 cctctgcgccgggtgcgacgcgcgcgcgcacggcgccggctcgcgccacgcgcgcgtctg 203

                                         
Query: 297 gctctgcgaggtctgcgagcacgcgcccgc 326
           ||||||||||||||||||||||||||||||
Sbjct: 204 gctctgcgaggtctgcgagcacgcgcccgc 233
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>gb|AF052585.1|AF052585 Malus domestica cultivar Fuji CONSTANS-like protein 2 (Col2) mRNA,
           complete cds
          Length = 1233

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 280 cgccacgcccgggtctggctctgcgaggtctgcgagca 317
           |||||| |||| ||||||||||||||||||||||||||
Sbjct: 178 cgccacccccgtgtctggctctgcgaggtctgcgagca 215



 Score = 46.1 bits (23), Expect = 0.070
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 214 ttctgccgcgccgacgccgcgttcctctgcg 244
           ||||||||||||||| |||| ||||||||||
Sbjct: 103 ttctgccgcgccgactccgccttcctctgcg 133
to top
>ref|NM_201801.1| Arabidopsis thaliana zinc ion binding AT2G24790 transcript variant
           AT2G24790.2 mRNA, complete cds
          Length = 726

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 214 ttctgccgcgccgacgccgcgttcctctgcgccggctgcgacg 256
           ||||||||||| ||||||||||| ||||||| || ||||||||
Sbjct: 116 ttctgccgcgcagacgccgcgtttctctgcggcgactgcgacg 158
to top
>ref|NM_128038.2| Arabidopsis thaliana transcription factor/ zinc ion binding
           AT2G24790 transcript variant AT2G24790.1 mRNA, complete
           cds
          Length = 1145

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 214 ttctgccgcgccgacgccgcgttcctctgcgccggctgcgacg 256
           ||||||||||| ||||||||||| ||||||| || ||||||||
Sbjct: 116 ttctgccgcgcagacgccgcgtttctctgcggcgactgcgacg 158
to top
>gb|AY140103.1| Arabidopsis thaliana CONSTANS-like B-box zinc finger protein
           (At2g24790) mRNA, complete cds
          Length = 1103

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 214 ttctgccgcgccgacgccgcgttcctctgcgccggctgcgacg 256
           ||||||||||| ||||||||||| ||||||| || ||||||||
Sbjct: 80  ttctgccgcgcagacgccgcgtttctctgcggcgactgcgacg 122
to top
>gb|AC007266.5| Arabidopsis thaliana chromosome 2 clone F27A10 map mi238, complete
             sequence
          Length = 66237

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 214   ttctgccgcgccgacgccgcgttcctctgcgccggctgcgacg 256
             ||||||||||| ||||||||||| ||||||| || ||||||||
Sbjct: 63914 ttctgccgcgcagacgccgcgtttctctgcggcgactgcgacg 63956
to top
>gb|AC006585.8| Arabidopsis thaliana chromosome 2 clone F27C12 map mi238, complete
             sequence
          Length = 103495

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 214   ttctgccgcgccgacgccgcgttcctctgcgccggctgcgacg 256
             ||||||||||| ||||||||||| ||||||| || ||||||||
Sbjct: 99979 ttctgccgcgcagacgccgcgtttctctgcggcgactgcgacg 99937
to top
>gb|AY058130.1| Arabidopsis thaliana At2g24790/F27A10.10 mRNA, complete cds
          Length = 1127

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 214 ttctgccgcgccgacgccgcgttcctctgcgccggctgcgacg 256
           ||||||||||| ||||||||||| ||||||| || ||||||||
Sbjct: 116 ttctgccgcgcagacgccgcgtttctctgcggcgactgcgacg 158
to top
>emb|BX819991.1|CNS0A8F5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS57ZG12 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1113

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 214 ttctgccgcgccgacgccgcgttcctctgcgccggctgcgacg 256
           ||||||||||| ||||||||||| ||||||| || ||||||||
Sbjct: 102 ttctgccgcgcagacgccgcgtttctctgcggcgactgcgacg 144
to top
>emb|BX819670.1|CNS0A8GB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS14ZD07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1080

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 214 ttctgccgcgccgacgccgcgttcctctgcgccggctgcgacg 256
           ||||||||||| ||||||||||| ||||||| || ||||||||
Sbjct: 89  ttctgccgcgcagacgccgcgtttctctgcggcgactgcgacg 131
to top
>emb|BX841997.1|CNS09YA6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB52ZG02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1088

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 214 ttctgccgcgccgacgccgcgttcctctgcgccggctgcgacg 256
           ||||||||||| ||||||||||| ||||||| || ||||||||
Sbjct: 70  ttctgccgcgcagacgccgcgtttctctgcggcgactgcgacg 112
to top
>gb|BT002107.1| Arabidopsis thaliana CONSTANS-like B-box zinc finger protein
           (At2g24790) mRNA, complete cds
          Length = 990

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 214 ttctgccgcgccgacgccgcgttcctctgcgccggctgcgacg 256
           ||||||||||| ||||||||||| ||||||| || ||||||||
Sbjct: 55  ttctgccgcgcagacgccgcgtttctctgcggcgactgcgacg 97
to top
>gb|AF052584.1|AF052584 Malus domestica cultivar Fuji CONSTANS-like protein 1 (Col1) mRNA,
           complete cds
          Length = 1235

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 280 cgccacgcccgggtctggctctgcgaggtctgcgagca 317
           ||||||||||| ||||||||||||||||| || |||||
Sbjct: 211 cgccacgcccgcgtctggctctgcgaggtgtgtgagca 248
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 223      gccgacgccgcgttcctctgcgccggctgcgacgc 257
                |||||||||||| | |||||||||| |||||||||
Sbjct: 26460742 gccgacgccgcggtgctctgcgccgcctgcgacgc 26460708
to top
>emb|BX842081.1|CNS09Y9F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL51ZC06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1120

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 39/43 (90%), Gaps = 1/43 (2%)
 Strand = Plus / Plus

                                                      
Query: 214 ttctgccgcgccgacgccgcgttcctctgcgccggctgcgacg 256
           ||||||||||| ||||||||||| ||||||| || ||||||||
Sbjct: 92  ttctgccgcgc-gacgccgcgtttctctgcggcgactgcgacg 133
to top
>gb|AY085729.1| Arabidopsis thaliana clone 17434 mRNA, complete sequence
          Length = 1124

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 214 ttctgccgcgccgacgccgcgttcctctgcg 244
           ||||||||||| ||||||||||| |||||||
Sbjct: 116 ttctgccgcgcagacgccgcgtttctctgcg 146
to top
>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0709F06
          Length = 170964

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 223   gccgacgccgcgttcctctgcgccggctgcgacgc 257
             |||||||||||| | |||||||||| |||||||||
Sbjct: 72781 gccgacgccgcggtgctctgcgccgcctgcgacgc 72747
to top
>ref|XM_313005.2| Anopheles gambiae str. PEST ENSANGP00000020427
           (ENSANGG00000017938), partial mRNA
          Length = 573

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 172 gcgagggcgtgcgattcgtgcgc 194
           |||||||||||||||||||||||
Sbjct: 125 gcgagggcgtgcgattcgtgcgc 147
to top
>gb|AF490468.1| Hordeum vulgare subsp. vulgare cultivar Morex CONSTANS-like protein
            (CO1) gene, complete cds
          Length = 4071

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 216  ctgccgcgccgacgccgcgttcctctgcgc 245
            ||||||||||||| |||||| |||||||||
Sbjct: 1523 ctgccgcgccgactccgcgtacctctgcgc 1552
to top
>gb|AF490467.1| Hordeum vulgare subsp. vulgare cultivar Igri CONSTANS-like protein
           (CO1) gene, complete cds
          Length = 2252

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 216 ctgccgcgccgacgccgcgttcctctgcgc 245
           ||||||||||||| |||||| |||||||||
Sbjct: 128 ctgccgcgccgactccgcgtacctctgcgc 157
to top
>gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0048I21, complete sequence
          Length = 137650

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   gccatggagggggaggagaag 138
             |||||||||||||||||||||
Sbjct: 16704 gccatggagggggaggagaag 16684
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>ref|XM_475261.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2064

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 118  gccatggagggggaggagaag 138
            |||||||||||||||||||||
Sbjct: 1837 gccatggagggggaggagaag 1857
to top
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 240    ctgcgccggctgcgacgcgcgcgcg 264
              |||||||||||||| ||||||||||
Sbjct: 243771 ctgcgccggctgcggcgcgcgcgcg 243747
to top
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09,
              complete sequence
          Length = 177374

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 118    gccatggagggggaggagaag 138
              |||||||||||||||||||||
Sbjct: 145727 gccatggagggggaggagaag 145707
to top
>gb|AC123949.5| Mus musculus BAC clone RP23-119H13 from 14, complete sequence
          Length = 196995

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 118    gccatggagggggaggagaag 138
              |||||||||||||||||||||
Sbjct: 178924 gccatggagggggaggagaag 178904
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 67     atcacggcggtggcgctggtg 87
              |||||||||||||||||||||
Sbjct: 653979 atcacggcggtggcgctggtg 653959
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 118      gccatggagggggaggagaag 138
                |||||||||||||||||||||
Sbjct: 20889926 gccatggagggggaggagaag 20889906
to top
>gb|AF186384.1|AF186384 Coprinus cinereus Rcb2.42 (rcb2.42) gene, complete cds
          Length = 4591

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 75  ggtggcgctggtgctagctgc 95
           |||||||||||||||||||||
Sbjct: 759 ggtggcgctggtgctagctgc 739
to top
>dbj|AK106696.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-D06, full
            insert sequence
          Length = 2273

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 118  gccatggagggggaggagaag 138
            |||||||||||||||||||||
Sbjct: 1870 gccatggagggggaggagaag 1890
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>gb|AC140393.3| Mus musculus BAC clone RP24-179D17 from 14, complete sequence
          Length = 184279

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 118    gccatggagggggaggagaag 138
              |||||||||||||||||||||
Sbjct: 154030 gccatggagggggaggagaag 154050
to top
>dbj|AP004513.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT01O22, TM0043a,
             complete sequence
          Length = 54726

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 298   ctctgcgaggtctgcgagcacgcgcccgc 326
             |||||||||||||||||||| || |||||
Sbjct: 29483 ctctgcgaggtctgcgagcaagcccccgc 29511
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 237     cctctgcgccggctgcgacg 256
               ||||||||||||||||||||
Sbjct: 2135804 cctctgcgccggctgcgacg 2135785
to top
>ref|NM_186278.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1242

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 211 ctcttctgccgcgccgacgccgcg 234
           ||||||| ||||||||||||||||
Sbjct: 550 ctcttctcccgcgccgacgccgcg 573
to top
>ref|XM_472742.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 783

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 40/46 (86%), Gaps = 3/46 (6%)
 Strand = Plus / Plus

                                                         
Query: 216 ctgccgcgccgacgccgcgttcctctgcgccggctgcgacgcgcgc 261
           ||||||||||||||||||   ||||||||||| || || |||||||
Sbjct: 189 ctgccgcgccgacgccgc---cctctgcgccgcctccgccgcgcgc 231
to top
>gb|AC146938.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0062O09 map near S6115, complete sequence
          Length = 148654

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   gggacgtgggcgcgagggcg 180
             ||||||||||||||||||||
Sbjct: 86451 gggacgtgggcgcgagggcg 86432
to top
>gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosome 17, complete sequence
          Length = 204306

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    gtgccatggagggggaggag 135
              ||||||||||||||||||||
Sbjct: 113480 gtgccatggagggggaggag 113499
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    gcgacgcgcgcgcgcacggc 270
              ||||||||||||||||||||
Sbjct: 855244 gcgacgcgcgcgcgcacggc 855263
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>ref|XM_878193.1| PREDICTED: Bos taurus similar to Insulin gene enhancer protein
           ISL-1 (Islet-1), transcript variant 4 (LOC614040), mRNA
          Length = 1476

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 ggctcttctgccgcgccgac 228
           ||||||||||||||||||||
Sbjct: 872 ggctcttctgccgcgccgac 891
to top
>ref|XM_878158.1| PREDICTED: Bos taurus similar to Insulin gene enhancer protein
           ISL-1 (Islet-1), transcript variant 3 (LOC614040), mRNA
          Length = 1624

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 ggctcttctgccgcgccgac 228
           ||||||||||||||||||||
Sbjct: 872 ggctcttctgccgcgccgac 891
to top
>ref|XM_866282.1| PREDICTED: Bos taurus similar to Insulin gene enhancer protein
           ISL-1 (Islet-1), transcript variant 2 (LOC614040), mRNA
          Length = 1582

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 ggctcttctgccgcgccgac 228
           ||||||||||||||||||||
Sbjct: 872 ggctcttctgccgcgccgac 891
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 251     gcgacgcgcgcgcgcacggc 270
               ||||||||||||||||||||
Sbjct: 1871850 gcgacgcgcgcgcgcacggc 1871869
to top
>ref|XM_824617.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.01.8230)
            partial mRNA
          Length = 3207

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  gtgccatggagggggaggag 135
            ||||||||||||||||||||
Sbjct: 1505 gtgccatggagggggaggag 1524
to top
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 220     cgcgccgacgccgcgttcct 239
               ||||||||||||||||||||
Sbjct: 1131842 cgcgccgacgccgcgttcct 1131823
to top
>emb|AL137026.21| Human DNA sequence from clone RP11-20J15 on chromosome 10 Contains
             CXCL12 gene for chemokine (C-X-C motif) ligand 12 (stromal
             cell-derived factor 1), two putative transcripts and two
             putative CpG islands, complete sequence
          Length = 184474

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    gtcgcctgctcactgcagcc 65
             ||||||||||||||||||||
Sbjct: 52561 gtcgcctgctcactgcagcc 52542
to top
>emb|AL035404.20|HS144F13 Human DNA sequence from clone RP1-144F13 on chromosome 1p33-34.3 Contains
              the HEYL gene for hairy/enhancer-of-split related protein
              with YRPW-like motif, a novel gene, the NT5C1A gene for
              cytosolic IA 5'-nucleotidase, the HPCAL4 gene for
              hippocalcin like 4, a novel pseudogene, the 5' end of the
              PPIE gene for peptidylprolyl isomerase E (cyclophilin E)
              and six CpG islands, complete sequence
          Length = 154412

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     ggtggcgctggtgctagctg 94
              ||||||||||||||||||||
Sbjct: 105501 ggtggcgctggtgctagctg 105482
to top
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16
          Length = 347356

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcacggcggtggcgctggtg 87
             ||||||||||||||||||||
Sbjct: 78998 tcacggcggtggcgctggtg 79017
to top
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14
          Length = 348251

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcacggcggtggcgctggtg 87
             ||||||||||||||||||||
Sbjct: 80290 tcacggcggtggcgctggtg 80309
to top
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12
          Length = 257701

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcacggcggtggcgctggtg 87
             ||||||||||||||||||||
Sbjct: 46485 tcacggcggtggcgctggtg 46504
to top
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16
          Length = 348068

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   cggtggtcggcggagcctac 159
             ||||||||||||||||||||
Sbjct: 14530 cggtggtcggcggagcctac 14549
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 251     gcgacgcgcgcgcgcacggc 270
               ||||||||||||||||||||
Sbjct: 2493073 gcgacgcgcgcgcgcacggc 2493054
to top
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21,
              complete sequence
          Length = 138969

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 40/46 (86%), Gaps = 3/46 (6%)
 Strand = Plus / Minus

                                                            
Query: 216    ctgccgcgccgacgccgcgttcctctgcgccggctgcgacgcgcgc 261
              ||||||||||||||||||   ||||||||||| || || |||||||
Sbjct: 109623 ctgccgcgccgacgccgc---cctctgcgccgcctccgccgcgcgc 109581
to top
>gb|AF262220.2|AF262220 Streptomyces venezuelae chloramphenicol biosynthetic gene cluster,
            partial sequence
          Length = 14159

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 224  ccgacgccgcgttcctctgcgccg 247
            |||||||||||||||||| |||||
Sbjct: 9129 ccgacgccgcgttcctcttcgccg 9152
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 161      gggacgtgggcgcgagggcg 180
                ||||||||||||||||||||
Sbjct: 12553384 gggacgtgggcgcgagggcg 12553403
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 211     ctcttctgccgcgccgacgccgcg 234
               ||||||| ||||||||||||||||
Sbjct: 2290097 ctcttctcccgcgccgacgccgcg 2290120
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>gb|AC123764.18| Homo sapiens chromosome 17, clone CTC-784N20, complete sequence
          Length = 144000

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   gccatggagggggaggagaa 137
             ||||||||||||||||||||
Sbjct: 29666 gccatggagggggaggagaa 29685
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>gb|AC127515.9| Homo sapiens chromosome 17, clone RP13-63C9, complete sequence
          Length = 88190

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   gccatggagggggaggagaa 137
             ||||||||||||||||||||
Sbjct: 86154 gccatggagggggaggagaa 86135
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>gb|AC087741.18| Homo sapiens chromosome 17, clone RP11-334C17, complete sequence
          Length = 182016

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   gccatggagggggaggagaa 137
             ||||||||||||||||||||
Sbjct: 11892 gccatggagggggaggagaa 11873
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 213     cttctgccgcgccgacgccgcgttcctc 240
               |||| |||||||||||| ||||||||||
Sbjct: 4442031 cttcggccgcgccgacgtcgcgttcctc 4442004
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>dbj|AB116234.1| Streptomyces venezuelae papA, papC, papB, ORFIV genes for
            4-amino-4-deoxychorismate synthase,
            4-amino-4-deoxyprephenate dehydrogenase,
            4-amino-4-deoxychorismate mutase, hypothetical protein,
            complete cds
          Length = 5251

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 224  ccgacgccgcgttcctctgcgccg 247
            |||||||||||||||||| |||||
Sbjct: 1651 ccgacgccgcgttcctcttcgccg 1674
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>gb|AY949772.1| Ovis aries ISL1 transcription factor (islet-1) mRNA, partial cds
          Length = 731

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 ggctcttctgccgcgccgac 228
           ||||||||||||||||||||
Sbjct: 251 ggctcttctgccgcgccgac 270
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>dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_B12
          Length = 121362

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 211   ctcttctgccgcgccgacgccgcg 234
             ||||||| ||||||||||||||||
Sbjct: 63796 ctcttctcccgcgccgacgccgcg 63819
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 161      gggacgtgggcgcgagggcg 180
                ||||||||||||||||||||
Sbjct: 12632691 gggacgtgggcgcgagggcg 12632710
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>gb|U21728.1|SVU21728 Streptomyces venezuelae p-aminobenzoic acid synthase (pabAB) gene,
            complete cds
          Length = 2660

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 224  ccgacgccgcgttcctctgcgccg 247
            |||||||||||||||||| |||||
Sbjct: 1627 ccgacgccgcgttcctcttcgccg 1650


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,506,039
Number of Sequences: 3902068
Number of extensions: 2506039
Number of successful extensions: 59906
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 58451
Number of HSP's gapped (non-prelim): 1457
length of query: 327
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 305
effective length of database: 17,147,199,772
effective search space: 5229895930460
effective search space used: 5229895930460
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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