ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet74g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_471066.1| Oryza sativa (japonica cultivar-group), predic... 236 6e-59
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 236 6e-59
3emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4,... 236 6e-59
4dbj|AK069299.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 1e-56
5gb|AY103738.1| Zea mays PCO146589 mRNA sequence 220 3e-54
6gb|AF358778.1| Oryza sativa clone Osch141 pyruvate dehydrogenase... 145 2e-31
7emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segmen... 88 3e-14
8dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 84 5e-13
9dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 82 2e-12
10gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 82 2e-12
11ref|NM_099991.2| Arabidopsis thaliana PDH-E1 ALPHA (PYRUVATE DEH... 60 7e-06
12gb|U80185.1|ATU80185 Arabidopsis thaliana pyruvate dehydrogenase... 60 7e-06
13gb|AY063724.1| Arabidopsis thaliana At1g01090/T25K16_8 mRNA, com... 60 7e-06
14gb|AY052721.1| Arabidopsis thaliana At1g01090/T25K16_8 mRNA, com... 60 7e-06
15emb|BX813802.1|CNS0ADI5 Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
16emb|BX815751.1|CNS0ACSX Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
17emb|BX815365.1|CNS0ACRU Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
18emb|BX815342.1|CNS0ACRT Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
19gb|AC007323.5|AC007323 Genomic sequence for Arabidopsis thaliana... 60 7e-06
20gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 54 5e-04
21gb|CP000097.1| Synechococcus sp. CC9902, complete genome 48 0.028
22gb|CP000110.1| Synechococcus sp. CC9605, complete genome 46 0.11
23emb|BX818597.1|CNS0ACON Arabidopsis thaliana Full-length cDNA Co... 46 0.11
24ref|NM_186848.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.44
25dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
26dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
27dbj|AK110647.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
28gb|BT012988.1| Lycopersicon esculentum clone 114208R, mRNA sequence 42 1.7
29gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 42 1.7
30gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 42 1.7
31dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 42 1.7
32dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 1.7
33dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 42 1.7
34ref|NM_186720.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.9
35gb|AC134837.3| Mus musculus BAC clone RP24-338L20 from chromosom... 40 6.9
36gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome 40 6.9
37gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 gen... 40 6.9
38ref|XM_933347.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 6.9
39dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
40gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplas... 40 6.9
41dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
42gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
43emb|AL121673.41|HSA305P22 Human DNA sequence from clone RP11-305... 40 6.9
44gb|AF029359.1|AF029359 Aspergillus niger beta-D-fructofuranosida... 40 6.9 
>ref|XM_471066.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1278

 Score =  236 bits (119), Expect = 6e-59
 Identities = 191/215 (88%)
 Strand = Plus / Plus

                                                                       
Query: 268 gaagaggcattggagctgtacgaggacatgattctcggccgtaacttcgaggacatgtgc 327
           |||||||| ||||||||||||||||||||| |||| |||||||  |||||||| ||||||
Sbjct: 226 gaagaggctttggagctgtacgaggacatggttcttggccgtattttcgaggatatgtgc 285

                                                                       
Query: 328 gcgcaaatgtactaccgtggcaagatgtttggtttcgtccatctttacagcgggcaggag 387
           ||||||||||||||||||||||||||||||||||| |||||| | ||||  ||||| || 
Sbjct: 286 gcgcaaatgtactaccgtggcaagatgtttggttttgtccatttatacaatgggcaagaa 345

                                                                       
Query: 388 gccgtctccaccggcttcatcaagcagctcaaccaacccgactgtgttgttagcacgtac 447
           || |||||||| ||||||||||||| |||||||||| | ||||||||||| ||||| |||
Sbjct: 346 gctgtctccactggcttcatcaagctgctcaaccaagctgactgtgttgtcagcacatac 405

                                              
Query: 448 cgtgaccacgtccgcgcactgtccaagggtgtccc 482
           |||||||||||||  || || ||||||||||||||
Sbjct: 406 cgtgaccacgtccatgccctatccaagggtgtccc 440



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ctcgccgtctcctccgacgt 221
           ||||||||||||||||||||
Sbjct: 151 ctcgccgtctcctccgacgt 170
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  236 bits (119), Expect = 6e-59
 Identities = 191/215 (88%)
 Strand = Plus / Plus

                                                                           
Query: 268     gaagaggcattggagctgtacgaggacatgattctcggccgtaacttcgaggacatgtgc 327
               |||||||| ||||||||||||||||||||| |||| |||||||  |||||||| ||||||
Sbjct: 1124223 gaagaggctttggagctgtacgaggacatggttcttggccgtattttcgaggatatgtgc 1124282

                                                                           
Query: 328     gcgcaaatgtactaccgtggcaagatgtttggtttcgtccatctttacagcgggcaggag 387
               ||||||||||||||||||||||||||||||||||| |||||| | ||||  ||||| || 
Sbjct: 1124283 gcgcaaatgtactaccgtggcaagatgtttggttttgtccatttatacaatgggcaagaa 1124342

                                                                           
Query: 388     gccgtctccaccggcttcatcaagcagctcaaccaacccgactgtgttgttagcacgtac 447
               || |||||||| ||||||||||||| |||||||||| | ||||||||||| ||||| |||
Sbjct: 1124343 gctgtctccactggcttcatcaagctgctcaaccaagctgactgtgttgtcagcacatac 1124402

                                                  
Query: 448     cgtgaccacgtccgcgcactgtccaagggtgtccc 482
               |||||||||||||  || || ||||||||||||||
Sbjct: 1124403 cgtgaccacgtccatgccctatccaagggtgtccc 1124437



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 202     ctcgccgtctcctccgacgt 221
               ||||||||||||||||||||
Sbjct: 1123388 ctcgccgtctcctccgacgt 1123407
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>emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020P07,
             complete sequence
          Length = 167895

 Score =  236 bits (119), Expect = 6e-59
 Identities = 191/215 (88%)
 Strand = Plus / Plus

                                                                         
Query: 268   gaagaggcattggagctgtacgaggacatgattctcggccgtaacttcgaggacatgtgc 327
             |||||||| ||||||||||||||||||||| |||| |||||||  |||||||| ||||||
Sbjct: 66605 gaagaggctttggagctgtacgaggacatggttcttggccgtattttcgaggatatgtgc 66664

                                                                         
Query: 328   gcgcaaatgtactaccgtggcaagatgtttggtttcgtccatctttacagcgggcaggag 387
             ||||||||||||||||||||||||||||||||||| |||||| | ||||  ||||| || 
Sbjct: 66665 gcgcaaatgtactaccgtggcaagatgtttggttttgtccatttatacaatgggcaagaa 66724

                                                                         
Query: 388   gccgtctccaccggcttcatcaagcagctcaaccaacccgactgtgttgttagcacgtac 447
             || |||||||| ||||||||||||| |||||||||| | ||||||||||| ||||| |||
Sbjct: 66725 gctgtctccactggcttcatcaagctgctcaaccaagctgactgtgttgtcagcacatac 66784

                                                
Query: 448   cgtgaccacgtccgcgcactgtccaagggtgtccc 482
             |||||||||||||  || || ||||||||||||||
Sbjct: 66785 cgtgaccacgtccatgccctatccaagggtgtccc 66819



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   ctcgccgtctcctccgacgt 221
             ||||||||||||||||||||
Sbjct: 65770 ctcgccgtctcctccgacgt 65789
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>dbj|AK069299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012M21, full
           insert sequence
          Length = 1736

 Score =  228 bits (115), Expect = 1e-56
 Identities = 190/215 (88%)
 Strand = Plus / Plus

                                                                       
Query: 268 gaagaggcattggagctgtacgaggacatgattctcggccgtaacttcgaggacatgtgc 327
           |||||||| ||||||||||||||||||||| |||| |||||||  |||||||| ||||||
Sbjct: 366 gaagaggctttggagctgtacgaggacatggttcttggccgtattttcgaggatatgtgc 425

                                                                       
Query: 328 gcgcaaatgtactaccgtggcaagatgtttggtttcgtccatctttacagcgggcaggag 387
           ||||||||||||||||||||||| ||||||||||| |||||| | ||||  ||||| || 
Sbjct: 426 gcgcaaatgtactaccgtggcaaaatgtttggttttgtccatttatacaatgggcaagaa 485

                                                                       
Query: 388 gccgtctccaccggcttcatcaagcagctcaaccaacccgactgtgttgttagcacgtac 447
           || |||||||| ||||||||||||| |||||||||| | ||||||||||| ||||| |||
Sbjct: 486 gctgtctccactggcttcatcaagctgctcaaccaagctgactgtgttgtcagcacatac 545

                                              
Query: 448 cgtgaccacgtccgcgcactgtccaagggtgtccc 482
           |||||||||||||  || || ||||||||||||||
Sbjct: 546 cgtgaccacgtccatgccctatccaagggtgtccc 580



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ctcgccgtctcctccgacgt 221
           ||||||||||||||||||||
Sbjct: 291 ctcgccgtctcctccgacgt 310
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>gb|AY103738.1| Zea mays PCO146589 mRNA sequence
          Length = 1787

 Score =  220 bits (111), Expect = 3e-54
 Identities = 219/255 (85%)
 Strand = Plus / Plus

                                                                       
Query: 253 ccggcggtgacacgcgaagaggcattggagctgtacgaggacatgattctcggccgtaac 312
           |||||||| || || ||||||||| |||||||||| ||||||||| |||| ||||||   
Sbjct: 469 ccggcggttacccgggaagaggcactggagctgtatgaggacatggttcttggccgtgta 528

                                                                       
Query: 313 ttcgaggacatgtgcgcgcaaatgtactaccgtggcaagatgtttggtttcgtccatctt 372
           |||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 529 ttcgaggacatgtgtgcacaaatgtactaccgtggcaagatgtttggtttcgtccacctt 588

                                                                       
Query: 373 tacagcgggcaggaggccgtctccaccggcttcatcaagcagctcaaccaacccgactgt 432
           ||||  || |||||||| |||||||| ||||||||||| |  || |||||| | ||||||
Sbjct: 589 tacaatggccaggaggctgtctccactggcttcatcaaacttctgaaccaagctgactgt 648

                                                                       
Query: 433 gttgttagcacgtaccgtgaccacgtccgcgcactgtccaagggtgtcccagcccgtgaa 492
           ||||||||||| |||||||| || ||||  || ||||||||||||||||| || |||   
Sbjct: 649 gttgttagcacataccgtgatcatgtccatgcgctgtccaagggtgtcccggcacgttct 708

                          
Query: 493 gtcatggccgagctc 507
           |||||||| ||||||
Sbjct: 709 gtcatggctgagctc 723
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>gb|AF358778.1| Oryza sativa clone Osch141 pyruvate dehydrogenase E1 alpha subunit
           mRNA, partial cds
          Length = 380

 Score =  145 bits (73), Expect = 2e-31
 Identities = 127/145 (87%)
 Strand = Plus / Plus

                                                                       
Query: 338 actaccgtggcaagatgtttggtttcgtccatctttacagcgggcaggaggccgtctcca 397
           ||||||||||||||||||||||||| |||||| | ||||  ||||| || || |||||||
Sbjct: 1   actaccgtggcaagatgtttggttttgtccatttatacaatgggcaagaagctgtctcca 60

                                                                       
Query: 398 ccggcttcatcaagcagctcaaccaacccgactgtgttgttagcacgtaccgtgaccacg 457
           | ||||||||||||| |||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 61  ctggcttcatcaagctgctcaaccaagctgactgtgttgtcagcacataccgtgaccacg 120

                                    
Query: 458 tccgcgcactgtccaagggtgtccc 482
           |||  || || ||||||||||||||
Sbjct: 121 tccatgccctatccaagggtgtccc 145
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>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7
          Length = 349213

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 80/92 (86%)
 Strand = Plus / Plus

                                                                          
Query: 301    ctcggccgtaacttcgaggacatgtgcgcgcaaatgtactaccgtggcaagatgtttggt 360
              |||||||||  ||||||||||| ||||||| | ||||||||||| ||||||||||| || 
Sbjct: 167485 ctcggccgtcgcttcgaggacaagtgcgcggagatgtactaccgcggcaagatgttcggg 167544

                                              
Query: 361    ttcgtccatctttacagcgggcaggaggccgt 392
              ||||| ||||| |||| ||| |||||||||||
Sbjct: 167545 ttcgttcatctctacaacggtcaggaggccgt 167576
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                           
Query: 325     tgcgcgcaaatgtactaccgtggcaagatgtttggtttcgtccatctttacagcgggcag 384
               ||||| || ||||||||||| |||||| |||| |||||||||||||| |||| ||| |||
Sbjct: 3031150 tgcgcccagatgtactaccgcggcaagttgttcggtttcgtccatctctacaacggccag 3031209

                                         
Query: 385     gaggccgtctccaccggcttcatcaa 410
               || ||||||||||||||  |||||||
Sbjct: 3031210 gaagccgtctccaccggaatcatcaa 3031235



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                           
Query: 312     cttcgaggacatgtgcgcgcaaatgtactaccgtggcaagatgtttggtttcgtccatct 371
               |||||||||||  ||||| || ||||||||||| ||||||||||| || || || || ||
Sbjct: 1649988 cttcgaggacacctgcgcccagatgtactaccgcggcaagatgttcggctttgtgcacct 1650047

                                                       
Query: 372     ttacagcgggcaggaggccgtctccaccggcttcatcaag 411
                |||| ||| ||||| ||||||||||| ||| ||||||||
Sbjct: 1650048 ctacaacggtcaggaagccgtctccacaggcgtcatcaag 1650087
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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                           
Query: 289     gaggacatgattctcggccgtaacttcgaggacatgtgcgcgcaaatgtactaccgtggc 348
               ||||||||| |||| ||||| | ||||||||||| ||| ||| | ||||| ||||| |||
Sbjct: 2298570 gaggacatggttctaggccgcaccttcgaggacaagtgtgcggagatgtattaccgcggc 2298511

                                                        
Query: 349     aagatgtttggtttcgtccatctttacagcgggcaggaggc 389
               ||||||||||| |||||||| || |||| |||||| |||||
Sbjct: 2298510 aagatgtttggcttcgtccacctctacaacgggcaagaggc 2298470
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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 86/101 (85%)
 Strand = Plus / Plus

                                                                           
Query: 289     gaggacatgattctcggccgtaacttcgaggacatgtgcgcgcaaatgtactaccgtggc 348
               ||||||||| |||| ||||| | ||||||||||| ||| ||| | ||||| ||||| |||
Sbjct: 2018467 gaggacatggttctaggccgcaccttcgaggacaagtgtgcggagatgtattaccgcggc 2018526

                                                        
Query: 349     aagatgtttggtttcgtccatctttacagcgggcaggaggc 389
               ||||||||||| |||||||| || |||| |||||| |||||
Sbjct: 2018527 aagatgtttggcttcgtccacctctacaacgggcaagaggc 2018567
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>ref|NM_099991.2| Arabidopsis thaliana PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1
           ALPHA); oxidoreductase, acting on the aldehyde or oxo
           group of donors, disulfide as acc> AT1G01090 (PDH-E1
           ALPHA) mRNA, complete cds
          Length = 1620

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 313 ttcgaggacatgtgcgcgcaaatgtactaccgtggcaagatgtttggttt 362
           ||||| |||||||| || |||||||| ||||| |||||||||||||||||
Sbjct: 402 ttcgaagacatgtgtgctcaaatgtattaccgaggcaagatgtttggttt 451
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>gb|U80185.1|ATU80185 Arabidopsis thaliana pyruvate dehydrogenase E1 alpha subunit mRNA,
           nuclear gene encoding plastid protein, complete cds
          Length = 1541

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 313 ttcgaggacatgtgcgcgcaaatgtactaccgtggcaagatgtttggttt 362
           ||||| |||||||| || |||||||| ||||| |||||||||||||||||
Sbjct: 406 ttcgaagacatgtgtgctcaaatgtattaccgaggcaagatgtttggttt 455
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>gb|AY063724.1| Arabidopsis thaliana At1g01090/T25K16_8 mRNA, complete cds
          Length = 1287

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 313 ttcgaggacatgtgcgcgcaaatgtactaccgtggcaagatgtttggttt 362
           ||||| |||||||| || |||||||| ||||| |||||||||||||||||
Sbjct: 289 ttcgaagacatgtgtgctcaaatgtattaccgaggcaagatgtttggttt 338
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>gb|AY052721.1| Arabidopsis thaliana At1g01090/T25K16_8 mRNA, complete cds
          Length = 1610

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 313 ttcgaggacatgtgcgcgcaaatgtactaccgtggcaagatgtttggttt 362
           ||||| |||||||| || |||||||| ||||| |||||||||||||||||
Sbjct: 404 ttcgaagacatgtgtgctcaaatgtattaccgaggcaagatgtttggttt 453
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>emb|BX813802.1|CNS0ADI5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB3ZG10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1436

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 313 ttcgaggacatgtgcgcgcaaatgtactaccgtggcaagatgtttggttt 362
           ||||| |||||||| || |||||||| ||||| |||||||||||||||||
Sbjct: 378 ttcgaagacatgtgtgctcaaatgtattaccgaggcaagatgtttggttt 427
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>emb|BX815751.1|CNS0ACSX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS90ZB04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1472

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 313 ttcgaggacatgtgcgcgcaaatgtactaccgtggcaagatgtttggttt 362
           ||||| |||||||| || |||||||| ||||| |||||||||||||||||
Sbjct: 390 ttcgaagacatgtgtgctcaaatgtattaccgaggcaagatgtttggttt 439
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>emb|BX815365.1|CNS0ACRU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS55ZC08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1441

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 313 ttcgaggacatgtgcgcgcaaatgtactaccgtggcaagatgtttggttt 362
           ||||| |||||||| || |||||||| ||||| |||||||||||||||||
Sbjct: 370 ttcgaagacatgtgtgctcaaatgtattaccgaggcaagatgtttggttt 419
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>emb|BX815342.1|CNS0ACRT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS53ZG06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1557

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 313 ttcgaggacatgtgcgcgcaaatgtactaccgtggcaagatgtttggttt 362
           ||||| |||||||| || |||||||| ||||| |||||||||||||||||
Sbjct: 394 ttcgaagacatgtgtgctcaaatgtattaccgaggcaagatgtttggttt 443
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>gb|AC007323.5|AC007323 Genomic sequence for Arabidopsis thaliana BAC T25K16 from chromosome I,
             complete sequence
          Length = 86436

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                               
Query: 313   ttcgaggacatgtgcgcgcaaatgtactaccgtggcaagatgtttggttt 362
             ||||| |||||||| || |||||||| ||||| |||||||||||||||||
Sbjct: 48497 ttcgaagacatgtgtgctcaaatgtattaccgaggcaagatgtttggttt 48448
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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                          
Query: 316    gaggacatgtgcgcgcaaatgtactaccgtggcaagatgtttggtttcgtccatctttac 375
              ||||||| ||||||  |||||||||||   ||||||||||| || || || || || |||
Sbjct: 535212 gaggacaagtgcgccgaaatgtactacaagggcaagatgttcggctttgtgcacctgtac 535271

                                     
Query: 376    agcgggcaggaggccgtctccac 398
              | ||||||||| |||||||||||
Sbjct: 535272 aacgggcaggaagccgtctccac 535294
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>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                           
Query: 334     atgtactaccgtggcaagatgtttggtttcgtccatctttacagcgggcaggaggccgtc 393
               ||||| ||||| |||||||||||||| ||||| || ||||||| ||| || || ||||||
Sbjct: 1469631 atgtattaccggggcaagatgtttggcttcgttcacctttacaacggtcaagaagccgtc 1469690
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                          
Query: 316    gaggacatgtgcgcgcaaatgtactaccgtggcaagatgtttggtttcgtccatctttac 375
              ||||||| ||||||  | ||||||||||| ||||||||||| || ||||| || || |||
Sbjct: 851094 gaggacaagtgcgccgagatgtactaccggggcaagatgttcggcttcgtgcacctctac 851035

                         
Query: 376    agcgggcagga 386
              | ||| |||||
Sbjct: 851034 aacggtcagga 851024
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>emb|BX818597.1|CNS0ACON Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL87ZB08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1431

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 313 ttcgaggacatgtgcgcgcaaatgtactaccgtggcaagatgtttgg 359
           ||||| |||||||| || |||||||| ||||| || |||||||||||
Sbjct: 349 ttcgaagacatgtgtgctcaaatgtattaccgagggaagatgtttgg 395
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>ref|NM_186848.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1335

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 197 ccgtcctcgccgtctcctccgacgtcctca 226
           ||||| ||||||||||||||| ||||||||
Sbjct: 746 ccgtcgtcgccgtctcctccgccgtcctca 775
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 197     ccgtcctcgccgtctcctccgacgtcctca 226
               ||||| ||||||||||||||| ||||||||
Sbjct: 8360360 ccgtcgtcgccgtctcctccgccgtcctca 8360331



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 381     gcaggaggccgtctccaccg 400
               ||||||||||||||||||||
Sbjct: 7617332 gcaggaggccgtctccaccg 7617351
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>dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0021G06
          Length = 137678

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 197   ccgtcctcgccgtctcctccgacgtcctca 226
             ||||| ||||||||||||||| ||||||||
Sbjct: 65458 ccgtcgtcgccgtctcctccgccgtcctca 65429
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>dbj|AK110647.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-D08, full
           insert sequence
          Length = 1063

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 197 ccgtcctcgccgtctcctccgacgtcctca 226
           ||||| ||||||||||||||| ||||||||
Sbjct: 264 ccgtcgtcgccgtctcctccgccgtcctca 293
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>gb|BT012988.1| Lycopersicon esculentum clone 114208R, mRNA sequence
          Length = 1692

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 78/97 (80%)
 Strand = Plus / Plus

                                                                       
Query: 316 gaggacatgtgcgcgcaaatgtactaccgtggcaagatgtttggtttcgtccatctttac 375
           ||||||||||| || |||||||| ||| | || || ||||||||||| || ||| | |||
Sbjct: 438 gaggacatgtgtgcccaaatgtattacaggggaaaaatgtttggttttgtgcatttgtac 497

                                                
Query: 376 agcgggcaggaggccgtctccaccggcttcatcaagc 412
           | ||| || ||||| ||||| || || ||||| ||||
Sbjct: 498 aacggccaagaggcagtctctactgggttcattaagc 534
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 332     aaatgtactaccgtggcaagatgtttggtttcgtcca 368
               ||||||||||| | ||||| ||||||||||| |||||
Sbjct: 5362084 aaatgtactacaggggcaaaatgtttggttttgtcca 5362120
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                          
Query: 319    gacatgtgcgcgcaaatgtactaccgtggcaagatgtttggtttcgtccatctttacagc 378
              |||| ||||||  |||||||||||   ||||||||||| || || || ||||| |||| |
Sbjct: 311493 gacaagtgcgccgaaatgtactacaagggcaagatgttcggctttgtgcatctgtacaac 311434

                               
Query: 379    gggcaggaggccgtctc 395
              || || |||||||||||
Sbjct: 311433 ggccaagaggccgtctc 311417
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>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                    
Query: 334     atgtactaccgtggcaagatgtttggtttcgtccatctttacagcgggcagga 386
               ||||| ||||| ||||| ||||||||||| ||||| || |||| ||| |||||
Sbjct: 2230610 atgtattaccggggcaaaatgtttggttttgtccacctctacaacggccagga 2230662
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 450     tgaccacgtccgcgcactgtccaag 474
               |||||| ||||||||||||||||||
Sbjct: 2949063 tgaccaggtccgcgcactgtccaag 2949087
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 332     aaatgtactaccgtggcaagatgtttggtttcgtcca 368
               ||||||||||| | ||||| ||||||||||| |||||
Sbjct: 3303829 aaatgtactacagaggcaaaatgtttggttttgtcca 3303865
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>ref|NM_186720.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 477

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 381 gcaggaggccgtctccaccg 400
           ||||||||||||||||||||
Sbjct: 256 gcaggaggccgtctccaccg 275
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>gb|AC134837.3| Mus musculus BAC clone RP24-338L20 from chromosome 16, complete
             sequence
          Length = 175319

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 465   actgtccaagggtgtcccag 484
             ||||||||||||||||||||
Sbjct: 44921 actgtccaagggtgtcccag 44902
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>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                  
Query: 332    aaatgtactaccgtggcaagatgtttggtttcgtccatctttacagcgggca 383
              ||||||| ||| | || ||||||||||| || || |||||||||| ||||||
Sbjct: 808362 aaatgtattacagagggaagatgtttgggtttgttcatctttacaacgggca 808413
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>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence,
            complete sequence
          Length = 139614

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 195  ctccgtcctcgccgtctcct 214
            ||||||||||||||||||||
Sbjct: 9350 ctccgtcctcgccgtctcct 9369
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>ref|XM_933347.1| PREDICTED: Homo sapiens hypothetical protein LOC646031 (LOC646031),
           mRNA
          Length = 1410

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 374 acagcgggcaggaggccgtc 393
           ||||||||||||||||||||
Sbjct: 206 acagcgggcaggaggccgtc 187
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 195      ctccgtcctcgccgtctcct 214
                ||||||||||||||||||||
Sbjct: 18341420 ctccgtcctcgccgtctcct 18341401
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>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome
          Length = 164921

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 331    caaatgtactaccgtggcaagatgtttggttt 362
              ||||||||||| ||||| || |||||||||||
Sbjct: 153034 caaatgtactatcgtggaaaaatgtttggttt 153003
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>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0407H12
          Length = 167754

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 381    gcaggaggccgtctccaccg 400
              ||||||||||||||||||||
Sbjct: 122742 gcaggaggccgtctccaccg 122761
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 195      ctccgtcctcgccgtctcct 214
                ||||||||||||||||||||
Sbjct: 18351073 ctccgtcctcgccgtctcct 18351054
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>emb|AL121673.41|HSA305P22 Human DNA sequence from clone RP11-305P22 on chromosome 20 Contains the
             3' end of the C20orf11 gene, the C20orf59 gene, the BHLHB4
             gene for basic helix-loop-helix domain containing (class
             B) 4, the C20orf51 gene, a novel gene and seven CpG
             islands, complete sequence
          Length = 151163

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   acagcgggcaggaggccgtc 393
             ||||||||||||||||||||
Sbjct: 78698 acagcgggcaggaggccgtc 78717
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>gb|AF029359.1|AF029359 Aspergillus niger beta-D-fructofuranosidase gene, complete cds
          Length = 1778

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 201 cctcgccgtctcctccgacg 220
           ||||||||||||||||||||
Sbjct: 481 cctcgccgtctcctccgacg 500


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,633,984
Number of Sequences: 3902068
Number of extensions: 1633984
Number of successful extensions: 26141
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25910
Number of HSP's gapped (non-prelim): 231
length of query: 507
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 485
effective length of database: 17,147,199,772
effective search space: 8316391889420
effective search space used: 8316391889420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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