>CH004_HUMAN (Q9NR00) Protein C8orf4 (Thyroid cancer protein 1) (TC-1)|
          Length = 106

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +1

Query: 208 PSFHGSHFPRASAAVSKGNIFEH 276
           PS HG HF  AS   + GNIFE+
Sbjct: 20  PSIHGYHFDTASRKKAVGNIFEN 42

>CH004_BOVIN (Q5E969) Protein C8orf4 homolog|
          Length = 106

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +1

Query: 208 PSFHGSHFPRASAAVSKGNIFEH 276
           PS HG HF  AS   + GNIFE+
Sbjct: 20  PSIHGYHFDTASRKKAVGNIFEN 42

>CH004_MOUSE (Q9D915) Protein C8orf4 homolog|
          Length = 106

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 208 PSFHGSHFPRASAAVSKGNIFEH 276
           PS HG HF  A+   + GNIFE+
Sbjct: 20  PSIHGYHFDTAARKKAVGNIFEN 42

>RL15_AERPE (Q9YF98) 50S ribosomal protein L15P|
          Length = 158

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 148 GGYPAAGSGDPIRTWTWTFLPSFHG 222
           GGY AAG G    TWT  + P+++G
Sbjct: 34  GGYGAAGLGKHEWTWTIKYAPTWYG 58

>CAC1C_RABIT (P15381) Voltage-dependent L-type calcium channel alpha-1C subunit|
            (Voltage-gated calcium channel alpha subunit Cav1.2)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 1,
            cardiac muscle) (Smooth muscle calcium channel blocker
            receptor)
          Length = 2171

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
 Frame = +3

Query: 45   PLLLSNHPASVVDRAHPL-RRCRSSAGLDR---TRPATWRLPGGG----EXXXXXXXXXX 200
            PL L +H A  V    PL +R  S   L R   T PAT   PG      +          
Sbjct: 1951 PLHLVHHQALAVAGLSPLLQRSHSPTSLPRPCATPPAT---PGSRGWPPQPIPTLRLEGA 2007

Query: 201  XXXXXXXXTFPPRLCSSVEGEHL*TRSSPCRGGTTSPRR 317
                    +FP   C S  GE+     SPCRG +++ RR
Sbjct: 2008 DSSEKLNSSFPSIHCGSWSGEN-----SPCRGDSSAARR 2041


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,146,645
Number of Sequences: 219361
Number of extensions: 920758
Number of successful extensions: 3279
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3272
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)