ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet74e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475910.1| Oryza sativa (japonica cultivar-group), predic... 82 2e-12
2gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
3gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
5dbj|AK106699.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
6ref|XM_464648.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.38
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
9dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
10dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
11dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
12dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
13dbj|AK066754.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.38
14ref|NM_189664.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
15ref|XM_479678.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
16ref|XM_507559.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 1.5
17ref|XM_507558.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 1.5
18ref|XM_507082.2| PREDICTED Oryza sativa (japonica cultivar-group... 42 1.5
19ref|XM_450634.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
20gb|AC134044.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
21gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.5
22gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.5
23dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
24dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
25dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
27gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.5
28dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
29dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
30dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
31dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
32dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
33dbj|AK120393.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
34dbj|AK119709.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
35dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
36dbj|AK119206.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
37dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
38dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
39dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
40dbj|AK061654.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
41dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
42dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
43gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.5
44gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
45gb|AF010320.1|AF010320 Oryza sativa ferredoxin mRNA, complete cds 42 1.5
46dbj|D30763.1|RICFERR Oryza sativa (japonica cultivar-group) mRNA... 42 1.5
47ref|XM_550434.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
48ref|XM_468184.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
49ref|XM_464517.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
50ref|NM_192393.1| Oryza sativa (japonica cultivar-group), predic... 40 6.0
51ref|XM_478587.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
52ref|XM_478159.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
53gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.0
54gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
55gb|AY426767.1| Globodera rostochiensis matrix metalloproteinase ... 40 6.0
56emb|BX927092.21| Zebrafish DNA sequence from clone CH211-69I15 i... 40 6.0
57emb|BX928750.9| Zebrafish DNA sequence from clone DKEY-162P13 in... 40 6.0
58emb|CR753839.12| Zebrafish DNA sequence from clone CH211-12K18 i... 40 6.0
59emb|CR708696.2|CNS0G9S4 Tetraodon nigroviridis full-length cDNA 40 6.0
60emb|CR706341.2|CNS0G7YP Tetraodon nigroviridis full-length cDNA 40 6.0
61emb|CR701877.2|CNS0G4IP Tetraodon nigroviridis full-length cDNA 40 6.0
62emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.0
63emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.0
64emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.0
65emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 40 6.0
66emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 40 6.0
67emb|BX640414.1| Bordetella pertussis strain Tohama I, complete g... 40 6.0
68emb|BX323869.7| Zebrafish DNA sequence from clone CH211-206K18 i... 40 6.0
69emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.0
70emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.0
71emb|AL672185.7| Zebrafish DNA sequence from clone BUSM1-172P2 in... 40 6.0
72emb|CR352223.11| Zebrafish DNA sequence from clone CH211-124N19 ... 40 6.0
73emb|BX323844.7| Zebrafish DNA sequence from clone DKEY-29H18 in ... 40 6.0
74emb|BX571949.19| Zebrafish DNA sequence from clone DKEY-25F1 in ... 40 6.0
75emb|BX511179.5| Zebrafish DNA sequence from clone CH211-108A2 in... 40 6.0
76dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 6.0
77gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 6.0
78gb|AC151718.5| Mus musculus BAC clone RP23-142J2 from chromosome... 40 6.0
79emb|BX537290.9| Zebrafish DNA sequence from clone DKEY-89K1 in l... 40 6.0
80emb|BX296558.8| Zebrafish DNA sequence from clone CH211-261N20 i... 40 6.0
81gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 6.0
82gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 6.0
83dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
84dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
85dbj|AB184962.1| Bombyx mori aPKC mRNA for atypical protein kinas... 40 6.0
86dbj|AP005190.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
87dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
88dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
89dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
90dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
91dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
92dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
93dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
94emb|BX539310.9| Zebrafish DNA sequence from clone DKEY-19C16 in ... 40 6.0
95dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
96emb|X57619.1|HS82ARNA H.sapiens rearranged TCR Vbeta 8.2a mRNA f... 40 6.0
97emb|BX842613.7| Zebrafish DNA sequence from clone CH211-227J9 in... 40 6.0
98emb|BX649641.19| Zebrafish DNA sequence from clone CH211-223O1 i... 40 6.0
99emb|BX640464.10| Zebrafish DNA sequence from clone DKEY-22M8 in ... 40 6.0
100emb|BX957323.7| Zebrafish DNA sequence from clone CH211-285O8 in... 40 6.0
101emb|BX890540.5| Zebrafish DNA sequence from clone DKEY-211C3 in ... 40 6.0
102dbj|AK063136.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
103emb|BX005369.11| Zebrafish DNA sequence from clone CH211-51H13 i... 40 6.0
104gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 6.0
105emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 6.0
106emb|BX897744.17| Zebrafish DNA sequence from clone DKEY-168A10 i... 40 6.0
107gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
108emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.0
109gb|AF039653.1|AF039653 Agrobacterium tumefaciens membrane-fusion... 40 6.0
110emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.0
111emb|BX465207.14| Zebrafish DNA sequence from clone DKEY-103I16 i... 40 6.0
112gb|U63000.1|CJU63000 Callithrix jacchus T-cell receptor beta cha... 40 6.0
113gb|M14264.1|HUMTCBVF Human T-cell receptor rearranged beta-chain... 40 6.0
114gb|K02546.1|HUMTCBVA Human T-cell receptor germline beta-chain V... 40 6.0
115gb|M81773.1|HUMIGTCBCA Human (clone 8B3) T-cell receptor rearran... 40 6.0
116emb|X58323.1|HSTCRBM1 H.sapiens TCRB CK10 mRNA 40 6.0
117emb|X07222.1|HSTCBV82 Human T-cell receptor V-beta 8.2 gene 40 6.0
118emb|X04925.1|HSTCRB06 Human mRNA for T-cell receptor beta-chain ... 40 6.0 
>ref|XM_475910.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1224

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 128/157 (81%)
 Strand = Plus / Plus

                                                                       
Query: 230 caggtggcgcgagctccacggcgagaactcgtgggatgggctcctggaccctctggaccc 289
           |||||||||||||||||| ||  || |||||||| |||| ||||| ||||| || |||| 
Sbjct: 36  caggtggcgcgagctccatgggcaggactcgtggaatggcctcctcgacccgctcgacct 95

                                                                       
Query: 290 gcacctccgctccagcatcatctcctacggcgagatggtgcaggccgcctacgacgggtt 349
             |||||||||||  |||| ||||||| |||||| | ||||||||| |||||||    ||
Sbjct: 96  cgacctccgctcctccatcctctcctatggcgagctcgtgcaggccacctacgattcctt 155

                                                
Query: 350 caacaccgagaggcgctccccgcactgcggcgcgtgc 386
           ||||   ||||||||||| ||||||  ||||||||||
Sbjct: 156 caaccgggagaggcgctcgccgcacgccggcgcgtgc 192
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>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
              complete sequence
          Length = 187034

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 128/157 (81%)
 Strand = Plus / Minus

                                                                          
Query: 230    caggtggcgcgagctccacggcgagaactcgtgggatgggctcctggaccctctggaccc 289
              |||||||||||||||||| ||  || |||||||| |||| ||||| ||||| || |||| 
Sbjct: 167063 caggtggcgcgagctccatgggcaggactcgtggaatggcctcctcgacccgctcgacct 167004

                                                                          
Query: 290    gcacctccgctccagcatcatctcctacggcgagatggtgcaggccgcctacgacgggtt 349
                |||||||||||  |||| ||||||| |||||| | ||||||||| |||||||    ||
Sbjct: 167003 cgacctccgctcctccatcctctcctatggcgagctcgtgcaggccacctacgattcctt 166944

                                                   
Query: 350    caacaccgagaggcgctccccgcactgcggcgcgtgc 386
              ||||   ||||||||||| ||||||  ||||||||||
Sbjct: 166943 caaccgggagaggcgctcgccgcacgccggcgcgtgc 166907
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>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08,
             complete sequence
          Length = 119500

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 128/157 (81%)
 Strand = Plus / Minus

                                                                         
Query: 230   caggtggcgcgagctccacggcgagaactcgtgggatgggctcctggaccctctggaccc 289
             |||||||||||||||||| ||  || |||||||| |||| ||||| ||||| || |||| 
Sbjct: 17745 caggtggcgcgagctccatgggcaggactcgtggaatggcctcctcgacccgctcgacct 17686

                                                                         
Query: 290   gcacctccgctccagcatcatctcctacggcgagatggtgcaggccgcctacgacgggtt 349
               |||||||||||  |||| ||||||| |||||| | ||||||||| |||||||    ||
Sbjct: 17685 cgacctccgctcctccatcctctcctatggcgagctcgtgcaggccacctacgattcctt 17626

                                                  
Query: 350   caacaccgagaggcgctccccgcactgcggcgcgtgc 386
             ||||   ||||||||||| ||||||  ||||||||||
Sbjct: 17625 caaccgggagaggcgctcgccgcacgccggcgcgtgc 17589
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 128/157 (81%)
 Strand = Plus / Minus

                                                                            
Query: 230      caggtggcgcgagctccacggcgagaactcgtgggatgggctcctggaccctctggaccc 289
                |||||||||||||||||| ||  || |||||||| |||| ||||| ||||| || |||| 
Sbjct: 28382821 caggtggcgcgagctccatgggcaggactcgtggaatggcctcctcgacccgctcgacct 28382762

                                                                            
Query: 290      gcacctccgctccagcatcatctcctacggcgagatggtgcaggccgcctacgacgggtt 349
                  |||||||||||  |||| ||||||| |||||| | ||||||||| |||||||    ||
Sbjct: 28382761 cgacctccgctcctccatcctctcctatggcgagctcgtgcaggccacctacgattcctt 28382702

                                                     
Query: 350      caacaccgagaggcgctccccgcactgcggcgcgtgc 386
                ||||   ||||||||||| ||||||  ||||||||||
Sbjct: 28382701 caaccgggagaggcgctcgccgcacgccggcgcgtgc 28382665



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 187      cgacgccgccggcgccggcg 206
                ||||||||||||||||||||
Sbjct: 25303467 cgacgccgccggcgccggcg 25303448
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>dbj|AK106699.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-E01, full
           insert sequence
          Length = 1526

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 128/157 (81%)
 Strand = Plus / Plus

                                                                       
Query: 230 caggtggcgcgagctccacggcgagaactcgtgggatgggctcctggaccctctggaccc 289
           |||||||||||||||||| ||  || |||||||| |||| ||||| ||||| || |||| 
Sbjct: 120 caggtggcgcgagctccatgggcaggactcgtggaatggcctcctcgacccgctcgacct 179

                                                                       
Query: 290 gcacctccgctccagcatcatctcctacggcgagatggtgcaggccgcctacgacgggtt 349
             |||||||||||  |||| ||||||| |||||| | ||||||||| |||||||    ||
Sbjct: 180 cgacctccgctcctccatcctctcctatggcgagctcgtgcaggccacctacgattcctt 239

                                                
Query: 350 caacaccgagaggcgctccccgcactgcggcgcgtgc 386
           ||||   ||||||||||| ||||||  ||||||||||
Sbjct: 240 caaccgggagaggcgctcgccgcacgccggcgcgtgc 276
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>ref|XM_464648.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3483

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 186 acgacgccgccggcgccggcgc 207
           ||||||||||||||||||||||
Sbjct: 85  acgacgccgccggcgccggcgc 64
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 29/30 (96%), Gaps = 1/30 (3%)
 Strand = Plus / Minus

                                              
Query: 179      cgacgaca-cgacgccgccggcgccggcgc 207
                |||||||| |||||||||||||||||||||
Sbjct: 23969070 cgacgacagcgacgccgccggcgccggcgc 23969041



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 186     acgacgccgccggcgccggcgc 207
               ||||||||||||||||||||||
Sbjct: 5580843 acgacgccgccggcgccggcgc 5580822



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 188      gacgccgccggcgccggcgc 207
                ||||||||||||||||||||
Sbjct: 28755403 gacgccgccggcgccggcgc 28755422
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 186     acgacgccgccggcgccggcgc 207
               ||||||||||||||||||||||
Sbjct: 6485229 acgacgccgccggcgccggcgc 6485208



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 188      gacgccgccggcgccggcgc 207
                ||||||||||||||||||||
Sbjct: 33521422 gacgccgccggcgccggcgc 33521403



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 193     cgccggcgccggcgcgcgtc 212
               ||||||||||||||||||||
Sbjct: 4342213 cgccggcgccggcgcgcgtc 4342194
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>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0490F09
          Length = 149542

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 29/30 (96%), Gaps = 1/30 (3%)
 Strand = Plus / Minus

                                           
Query: 179   cgacgaca-cgacgccgccggcgccggcgc 207
             |||||||| |||||||||||||||||||||
Sbjct: 98681 cgacgacagcgacgccgccggcgccggcgc 98652
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>dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0664C05
          Length = 165354

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 186    acgacgccgccggcgccggcgc 207
              ||||||||||||||||||||||
Sbjct: 127751 acgacgccgccggcgccggcgc 127730
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>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1006_D05
          Length = 128178

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 186    acgacgccgccggcgccggcgc 207
              ||||||||||||||||||||||
Sbjct: 127222 acgacgccgccggcgccggcgc 127201
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>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1307A11
          Length = 131538

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 186   acgacgccgccggcgccggcgc 207
             ||||||||||||||||||||||
Sbjct: 45842 acgacgccgccggcgccggcgc 45821
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>dbj|AK066754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074G14, full
           insert sequence
          Length = 1797

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 29/30 (96%), Gaps = 1/30 (3%)
 Strand = Plus / Minus

                                         
Query: 179 cgacgaca-cgacgccgccggcgccggcgc 207
           |||||||| |||||||||||||||||||||
Sbjct: 568 cgacgacagcgacgccgccggcgccggcgc 539
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>ref|NM_189664.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 912

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 179 cgacgacacgacgccgccggcgccggcgc 207
           ||||||||||||  |||||||||||||||
Sbjct: 99  cgacgacacgacatcgccggcgccggcgc 71
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>ref|XM_479678.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 736

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 187 cgacgccgccggcgccggcgcgcgt 211
           ||||| |||||||||||||||||||
Sbjct: 138 cgacggcgccggcgccggcgcgcgt 162
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>ref|XM_507559.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.1 mRNA
          Length = 737

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 187 cgacgccgccggcgccggcgcgcgt 211
           ||||| |||||||||||||||||||
Sbjct: 139 cgacggcgccggcgccggcgcgcgt 163
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>ref|XM_507558.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.1 mRNA
          Length = 737

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 187 cgacgccgccggcgccggcgcgcgt 211
           ||||| |||||||||||||||||||
Sbjct: 139 cgacggcgccggcgccggcgcgcgt 163
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>ref|XM_507082.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.1 mRNA
          Length = 848

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 187 cgacgccgccggcgccggcgcgcgt 211
           ||||| |||||||||||||||||||
Sbjct: 140 cgacggcgccggcgccggcgcgcgt 164
to top
>ref|XM_450634.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1815

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 190 cgccgccggcgccggcgcgcg 210
           |||||||||||||||||||||
Sbjct: 877 cgccgccggcgccggcgcgcg 857
to top
>gb|AC134044.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019D06
              map S10616A, complete sequence
          Length = 182486

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 187    cgacgccgccggcgccggcgc 207
              |||||||||||||||||||||
Sbjct: 130077 cgacgccgccggcgccggcgc 130097
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 190     cgccgccggcgccggcgcgcg 210
               |||||||||||||||||||||
Sbjct: 2817562 cgccgccggcgccggcgcgcg 2817542
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 187     cgacgccgccggcgccggcgc 207
               |||||||||||||||||||||
Sbjct: 3633868 cgacgccgccggcgccggcgc 3633888
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 187     cgacgccgccggcgccggcgc 207
               |||||||||||||||||||||
Sbjct: 4002451 cgacgccgccggcgccggcgc 4002471
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 190      cgccgccggcgccggcgcgcg 210
                |||||||||||||||||||||
Sbjct: 11905236 cgccgccggcgccggcgcgcg 11905216
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 187    cgacgccgccggcgccggcgcgcgt 211
              ||||| |||||||||||||||||||
Sbjct: 236143 cgacggcgccggcgccggcgcgcgt 236119
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 179     cgacgacacgacgccgccggcgccggcgc 207
               ||||||||||||  |||||||||||||||
Sbjct: 4872473 cgacgacacgacatcgccggcgccggcgc 4872501



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 89/112 (79%)
 Strand = Plus / Minus

                                                                            
Query: 240      gagctccacggcgagaactcgtgggatgggctcctggaccctctggacccgcacctccgc 299
                ||||||||||||||| ||   ||| | || ||||| |||||||| ||| |  ||||||| 
Sbjct: 26380126 gagctccacggcgaggaccactggaagggcctcctcgaccctctcgacgccgacctccgg 26380067

                                                                    
Query: 300      tccagcatcatctcctacggcgagatggtgcaggccgcctacgacgggttca 351
                  |||| |||||  |||||||||| ||| ||||||| || |||||| |||||
Sbjct: 26380066 cgcagcgtcatcggctacggcgagctggcgcaggccaccaacgacgcgttca 26380015



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 188     gacgccgccggcgccggcgc 207
               ||||||||||||||||||||
Sbjct: 4566177 gacgccgccggcgccggcgc 4566196
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 189     acgccgccggcgccggcgcgc 209
               |||||||||||||||||||||
Sbjct: 3352384 acgccgccggcgccggcgcgc 3352364



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 187     cgacgccgccggcgccggcg 206
               ||||||||||||||||||||
Sbjct: 2800896 cgacgccgccggcgccggcg 2800915



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 187     cgacgccgccggcgccggcg 206
               ||||||||||||||||||||
Sbjct: 2298158 cgacgccgccggcgccggcg 2298177



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 187     cgacgccgccggcgccggcgcgcg 210
               ||||||||||| ||||||||||||
Sbjct: 1319479 cgacgccgccgacgccggcgcgcg 1319502
to top
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0710E05
          Length = 179714

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 179    cgacgacacgacgccgccggcgccggcgc 207
              ||||||||||||  |||||||||||||||
Sbjct: 117122 cgacgacacgacatcgccggcgccggcgc 117150
to top
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1001_G09
          Length = 118018

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 190   cgccgccggcgccggcgcgcg 210
             |||||||||||||||||||||
Sbjct: 86726 cgccgccggcgccggcgcgcg 86706
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>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0441A12
          Length = 185437

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 190  cgccgccggcgccggcgcgcg 210
            |||||||||||||||||||||
Sbjct: 9716 cgccgccggcgccggcgcgcg 9696
to top
>dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E06, full
           insert sequence
          Length = 1095

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 179 cgacgacacgacgccgccggcgccggcgc 207
           ||||||||||||  |||||||||||||||
Sbjct: 122 cgacgacacgacatcgccggcgccggcgc 94
to top
>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1300_E01
          Length = 103022

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 187  cgacgccgccggcgccggcgcgcgt 211
            ||||| |||||||||||||||||||
Sbjct: 2569 cgacggcgccggcgccggcgcgcgt 2545
to top
>dbj|AK120393.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075A06, full
           insert sequence
          Length = 848

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 187 cgacgccgccggcgccggcgcgcgt 211
           ||||| |||||||||||||||||||
Sbjct: 140 cgacggcgccggcgccggcgcgcgt 164
to top
>dbj|AK119709.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-E09, full
           insert sequence
          Length = 736

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 187 cgacgccgccggcgccggcgcgcgt 211
           ||||| |||||||||||||||||||
Sbjct: 138 cgacggcgccggcgccggcgcgcgt 162
to top
>dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F01, full
           insert sequence
          Length = 1944

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 187 cgacgccgccggcgccggcgcgcgt 211
           ||||| |||||||||||||||||||
Sbjct: 140 cgacggcgccggcgccggcgcgcgt 164
to top
>dbj|AK119206.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-D12, full
           insert sequence
          Length = 746

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 187 cgacgccgccggcgccggcgcgcgt 211
           ||||| |||||||||||||||||||
Sbjct: 148 cgacggcgccggcgccggcgcgcgt 172
to top
>dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D10, full
           insert sequence
          Length = 1094

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 179 cgacgacacgacgccgccggcgccggcgc 207
           ||||||||||||  |||||||||||||||
Sbjct: 121 cgacgacacgacatcgccggcgccggcgc 93
to top
>dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C11, full
           insert sequence
          Length = 1095

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 179 cgacgacacgacgccgccggcgccggcgc 207
           ||||||||||||  |||||||||||||||
Sbjct: 122 cgacgacacgacatcgccggcgccggcgc 94
to top
>dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083N07, full
           insert sequence
          Length = 1308

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 179 cgacgacacgacgccgccggcgccggcgc 207
           ||||||||||||  |||||||||||||||
Sbjct: 335 cgacgacacgacatcgccggcgccggcgc 307
to top
>dbj|AK061654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C09, full
           insert sequence
          Length = 737

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 187 cgacgccgccggcgccggcgcgcgt 211
           ||||| |||||||||||||||||||
Sbjct: 139 cgacggcgccggcgccggcgcgcgt 163
to top
>dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C05, full
           insert sequence
          Length = 1095

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 179 cgacgacacgacgccgccggcgccggcgc 207
           ||||||||||||  |||||||||||||||
Sbjct: 122 cgacgacacgacatcgccggcgccggcgc 94
to top
>dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B05, full
           insert sequence
          Length = 1114

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 179 cgacgacacgacgccgccggcgccggcgc 207
           ||||||||||||  |||||||||||||||
Sbjct: 122 cgacgacacgacatcgccggcgccggcgc 94
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 385     gcttctacgcctacgaggacctgct 409
               |||||||||||| ||||||||||||
Sbjct: 3908049 gcttctacgccttcgaggacctgct 3908073
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 187     cgacgccgccggcgccggcgc 207
               |||||||||||||||||||||
Sbjct: 4011145 cgacgccgccggcgccggcgc 4011165
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>gb|AF010320.1|AF010320 Oryza sativa ferredoxin mRNA, complete cds
          Length = 849

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 187 cgacgccgccggcgccggcgcgcgt 211
           ||||| |||||||||||||||||||
Sbjct: 133 cgacggcgccggcgccggcgcgcgt 157
to top
>dbj|D30763.1|RICFERR Oryza sativa (japonica cultivar-group) mRNA for ferredoxin,
           complete cds
          Length = 755

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 187 cgacgccgccggcgccggcgcgcgt 211
           ||||| |||||||||||||||||||
Sbjct: 133 cgacggcgccggcgccggcgcgcgt 157
to top
>ref|XM_550434.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1524

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 gacgccgccggcgccggcgc 207
           ||||||||||||||||||||
Sbjct: 553 gacgccgccggcgccggcgc 572
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>ref|XM_468184.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2898

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  gacgccgccggcgccggcgc 207
            ||||||||||||||||||||
Sbjct: 2611 gacgccgccggcgccggcgc 2630
to top
>ref|XM_464517.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 477

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 186 acgacgccgccggcgccggcgcgc 209
           ||||||||||||||| ||||||||
Sbjct: 182 acgacgccgccggcggcggcgcgc 205
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>ref|NM_192393.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1458

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 89/112 (79%)
 Strand = Plus / Plus

                                                                       
Query: 240 gagctccacggcgagaactcgtgggatgggctcctggaccctctggacccgcacctccgc 299
           ||||||||||||||| ||   ||| | || ||||| |||||||| ||| |  ||||||| 
Sbjct: 43  gagctccacggcgaggaccactggaagggcctcctcgaccctctcgacgccgacctccgg 102

                                                               
Query: 300 tccagcatcatctcctacggcgagatggtgcaggccgcctacgacgggttca 351
             |||| |||||  |||||||||| ||| ||||||| || |||||| |||||
Sbjct: 103 cgcagcgtcatcggctacggcgagctggcgcaggccaccaacgacgcgttca 154
to top
>ref|XM_478587.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2049

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 190 cgccgccggcgccggcgcgc 209
           ||||||||||||||||||||
Sbjct: 507 cgccgccggcgccggcgcgc 488
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>ref|XM_478159.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1473

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 193 cgccggcgccggcgcgcgtcctcg 216
           ||||||||||||||| ||||||||
Sbjct: 11  cgccggcgccggcgcacgtcctcg 34
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 187     cgacgccgccggcgccggcgcgcg 210
               ||||||||||| ||||||||||||
Sbjct: 1716005 cgacgccgccgccgccggcgcgcg 1716028
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>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06,
             complete sequence
          Length = 142068

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   cgacgccgccggcgccggcg 206
             ||||||||||||||||||||
Sbjct: 38071 cgacgccgccggcgccggcg 38052
to top
>gb|AY426767.1| Globodera rostochiensis matrix metalloproteinase mRNA, complete cds
          Length = 1913

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  gacgccgccggcgccggcgc 207
            ||||||||||||||||||||
Sbjct: 1639 gacgccgccggcgccggcgc 1658
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>emb|BX927092.21| Zebrafish DNA sequence from clone CH211-69I15 in linkage group 1,
             complete sequence
          Length = 108803

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   ccgtggccagcaggtggcgc 239
             ||||||||||||||||||||
Sbjct: 56886 ccgtggccagcaggtggcgc 56867
to top
>emb|BX928750.9| Zebrafish DNA sequence from clone DKEY-162P13 in linkage group 6,
             complete sequence
          Length = 178487

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   ccgtggccagcaggtggcgc 239
             ||||||||||||||||||||
Sbjct: 55378 ccgtggccagcaggtggcgc 55397



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  ccgtggccagcaggtggcgc 239
            ||||||||||||||||||||
Sbjct: 4201 ccgtggccagcaggtggcgc 4220
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>emb|CR753839.12| Zebrafish DNA sequence from clone CH211-12K18 in linkage group 14,
             complete sequence
          Length = 169064

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   ccgtggccagcaggtggcgc 239
             ||||||||||||||||||||
Sbjct: 22875 ccgtggccagcaggtggcgc 22894
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>emb|CR708696.2|CNS0G9S4 Tetraodon nigroviridis full-length cDNA
          Length = 572

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 271 tcctggaccctctggacccg 290
           ||||||||||||||||||||
Sbjct: 501 tcctggaccctctggacccg 520
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>emb|CR706341.2|CNS0G7YP Tetraodon nigroviridis full-length cDNA
          Length = 572

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 271 tcctggaccctctggacccg 290
           ||||||||||||||||||||
Sbjct: 501 tcctggaccctctggacccg 520
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>emb|CR701877.2|CNS0G4IP Tetraodon nigroviridis full-length cDNA
          Length = 1299

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  tcctggaccctctggacccg 290
            ||||||||||||||||||||
Sbjct: 1230 tcctggaccctctggacccg 1249
to top
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    aacacctcgcgcgccatgtc 106
             ||||||||||||||||||||
Sbjct: 35674 aacacctcgcgcgccatgtc 35693
to top
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   gccgccggcgccggcgcgcg 210
             ||||||||||||||||||||
Sbjct: 58579 gccgccggcgccggcgcgcg 58560
to top
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16
          Length = 347786

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    ctgcggcgcgtgcttctacg 393
              ||||||||||||||||||||
Sbjct: 248041 ctgcggcgcgtgcttctacg 248022
to top
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     aacacctcgcgcgccatgtc 106
              ||||||||||||||||||||
Sbjct: 199649 aacacctcgcgcgccatgtc 199630
to top
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    gccgccggcgccggcgcgcg 210
              ||||||||||||||||||||
Sbjct: 315262 gccgccggcgccggcgcgcg 315243
to top
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     aacacctcgcgcgccatgtc 106
              ||||||||||||||||||||
Sbjct: 225383 aacacctcgcgcgccatgtc 225364



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 191    gccgccggcgccggcgcgcg 210
              ||||||||||||||||||||
Sbjct: 186889 gccgccggcgccggcgcgcg 186908
to top
>emb|BX323869.7| Zebrafish DNA sequence from clone CH211-206K18 in linkage group 4
              Contains the gene for a novel protein similar to vertebrate
              minichromosome maintenance deficient 10 (S.cerevisiae)
              (MCM10), the gene for a novel protein (zgc:86930), the gene
              for a novel protein (zgc:73119), the 5' end of the gene for
              a novel protein similar to vertebrate PCTAIRE protein
              kinase 2 (PCTK2), the gene for a novel protein similar to
              vertebrate phytanoyl-CoA hydroxylase (Refsum disease)
              (PHYH) and a CpG island, complete sequence
          Length = 160964

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    ccgtggccagcaggtggcgc 239
              ||||||||||||||||||||
Sbjct: 137916 ccgtggccagcaggtggcgc 137935



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    ccgtggccagcaggtggcgc 239
              ||||||||||||||||||||
Sbjct: 135644 ccgtggccagcaggtggcgc 135663



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    ccgtggccagcaggtggcgc 239
              ||||||||||||||||||||
Sbjct: 117511 ccgtggccagcaggtggcgc 117530
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    gccgccggcgccggcgcgcg 210
              ||||||||||||||||||||
Sbjct: 999734 gccgccggcgccggcgcgcg 999715
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 191     gccgccggcgccggcgcgcg 210
               ||||||||||||||||||||
Sbjct: 3644145 gccgccggcgccggcgcgcg 3644126
to top
>emb|AL672185.7| Zebrafish DNA sequence from clone BUSM1-172P2 in linkage group 19
             Contains the 3' part of the abcb3l2 gene for  ATP-binding
             cassette, sub-family B (MDR/TAP), member 3 like 2, the 5'
             part of the mhc1uaa gene (major histocompatibility complex
             class I UAA protein) and four CpG islands, complete
             sequence
          Length = 47697

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   ccgtggccagcaggtggcgc 239
             ||||||||||||||||||||
Sbjct: 20432 ccgtggccagcaggtggcgc 20413
to top
>emb|CR352223.11| Zebrafish DNA sequence from clone CH211-124N19 in linkage group 9,
              complete sequence
          Length = 168212

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    gtggccagcaggtggcgcga 241
              ||||||||||||||||||||
Sbjct: 108401 gtggccagcaggtggcgcga 108420
to top
>emb|BX323844.7| Zebrafish DNA sequence from clone DKEY-29H18 in linkage group 7, complete
              sequence
          Length = 235079

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 220    ccgtggccagcaggtggcgc 239
              ||||||||||||||||||||
Sbjct: 142456 ccgtggccagcaggtggcgc 142437
to top
>emb|BX571949.19| Zebrafish DNA sequence from clone DKEY-25F1 in linkage group 11,
             complete sequence
          Length = 149012

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   ccgtggccagcaggtggcgc 239
             ||||||||||||||||||||
Sbjct: 17753 ccgtggccagcaggtggcgc 17734
to top
>emb|BX511179.5| Zebrafish DNA sequence from clone CH211-108A2 in linkage group 21,
            complete sequence
          Length = 80039

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  ccgtggccagcaggtggcgc 239
            ||||||||||||||||||||
Sbjct: 7131 ccgtggccagcaggtggcgc 7150
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    cgccgccggcgccggcgcgc 209
              ||||||||||||||||||||
Sbjct: 823102 cgccgccggcgccggcgcgc 823083
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 87      aacacctcgcgcgccatgtc 106
               ||||||||||||||||||||
Sbjct: 3214102 aacacctcgcgcgccatgtc 3214121
to top
>gb|AC151718.5| Mus musculus BAC clone RP23-142J2 from chromosome 7, complete sequence
          Length = 213292

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    acatagccagcaggctgcat 158
              ||||||||||||||||||||
Sbjct: 151882 acatagccagcaggctgcat 151901
to top
>emb|BX537290.9| Zebrafish DNA sequence from clone DKEY-89K1 in linkage group 5, complete
              sequence
          Length = 180630

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 220    ccgtggccagcaggtggcgc 239
              ||||||||||||||||||||
Sbjct: 154214 ccgtggccagcaggtggcgc 154195
to top
>emb|BX296558.8| Zebrafish DNA sequence from clone CH211-261N20 in linkage group 3,
             complete sequence
          Length = 151242

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   ccgtggccagcaggtggcgc 239
             ||||||||||||||||||||
Sbjct: 20753 ccgtggccagcaggtggcgc 20734
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 191    gccgccggcgccggcgcgcg 210
              ||||||||||||||||||||
Sbjct: 539723 gccgccggcgccggcgcgcg 539742
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 194     gccggcgccggcgcgcgtcctcgg 217
               ||||||||||||||||| ||||||
Sbjct: 2384277 gccggcgccggcgcgcgccctcgg 2384300
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 191      gccgccggcgccggcgcgcgtcct 214
                |||| |||||||||||||||||||
Sbjct: 25567698 gccgacggcgccggcgcgcgtcct 25567721
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 190      cgccgccggcgccggcgcgc 209
                ||||||||||||||||||||
Sbjct: 21302567 cgccgccggcgccggcgcgc 21302586



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 193      cgccggcgccggcgcgcgtcctcg 216
                ||||||||||||||| ||||||||
Sbjct: 18103734 cgccggcgccggcgcacgtcctcg 18103757
to top
>dbj|AB184962.1| Bombyx mori aPKC mRNA for atypical protein kinase C, complete cds
          Length = 2976

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 gacgccgccggcgccggcgc 207
           ||||||||||||||||||||
Sbjct: 858 gacgccgccggcgccggcgc 877
to top
>dbj|AP005190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0477A12
          Length = 138141

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 193   cgccggcgccggcgcgcgtcctcg 216
             ||||||||||||||| ||||||||
Sbjct: 39040 cgccggcgccggcgcacgtcctcg 39063
to top
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0032K15
          Length = 126195

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 89/112 (79%)
 Strand = Plus / Minus

                                                                         
Query: 240   gagctccacggcgagaactcgtgggatgggctcctggaccctctggacccgcacctccgc 299
             ||||||||||||||| ||   ||| | || ||||| |||||||| ||| |  ||||||| 
Sbjct: 53991 gagctccacggcgaggaccactggaagggcctcctcgaccctctcgacgccgacctccgg 53932

                                                                 
Query: 300   tccagcatcatctcctacggcgagatggtgcaggccgcctacgacgggttca 351
               |||| |||||  |||||||||| ||| ||||||| || |||||| |||||
Sbjct: 53931 cgcagcgtcatcggctacggcgagctggcgcaggccaccaacgacgcgttca 53880
to top
>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0544B02
          Length = 156339

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   cgccggcgccggcgcgcgtc 212
             ||||||||||||||||||||
Sbjct: 25777 cgccggcgccggcgcgcgtc 25758
to top
>dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0510F03
          Length = 149699

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    gacgccgccggcgccggcgc 207
              ||||||||||||||||||||
Sbjct: 100864 gacgccgccggcgccggcgc 100883
to top
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0028E05
          Length = 157631

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   gacgccgccggcgccggcgc 207
             ||||||||||||||||||||
Sbjct: 63178 gacgccgccggcgccggcgc 63197
to top
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0622F03
          Length = 170064

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    gacgccgccggcgccggcgc 207
              ||||||||||||||||||||
Sbjct: 155969 gacgccgccggcgccggcgc 155988
to top
>dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1008_E09
          Length = 101964

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   cgccgccggcgccggcgcgc 209
             ||||||||||||||||||||
Sbjct: 22735 cgccgccggcgccggcgcgc 22754
to top
>dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0458H05
          Length = 136299

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   cgccgccggcgccggcgcgc 209
             ||||||||||||||||||||
Sbjct: 88852 cgccgccggcgccggcgcgc 88871
to top
>emb|BX539310.9| Zebrafish DNA sequence from clone DKEY-19C16 in linkage group 20,
              complete sequence
          Length = 238530

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    ccgtggccagcaggtggcgc 239
              ||||||||||||||||||||
Sbjct: 229652 ccgtggccagcaggtggcgc 229671
to top
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0054K20
          Length = 153584

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   gacgccgccggcgccggcgc 207
             ||||||||||||||||||||
Sbjct: 96297 gacgccgccggcgccggcgc 96278
to top
>emb|X57619.1|HS82ARNA H.sapiens rearranged TCR Vbeta 8.2a mRNA for T cell receptor
          Length = 394

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 265 atgggctcctggaccctctg 284
           ||||||||||||||||||||
Sbjct: 53  atgggctcctggaccctctg 72
to top
>emb|BX842613.7| Zebrafish DNA sequence from clone CH211-227J9 in linkage group 19,
             complete sequence
          Length = 166128

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   ccgtggccagcaggtggcgc 239
             ||||||||||||||||||||
Sbjct: 10610 ccgtggccagcaggtggcgc 10591
to top
>emb|BX649641.19| Zebrafish DNA sequence from clone CH211-223O1 in linkage group 18,
             complete sequence
          Length = 141018

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   ccgtggccagcaggtggcgc 239
             ||||||||||||||||||||
Sbjct: 82010 ccgtggccagcaggtggcgc 82029
to top
>emb|BX640464.10| Zebrafish DNA sequence from clone DKEY-22M8 in linkage group 19,
             complete sequence
          Length = 255824

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   ccgtggccagcaggtggcgc 239
             ||||||||||||||||||||
Sbjct: 45271 ccgtggccagcaggtggcgc 45290
to top
>emb|BX957323.7| Zebrafish DNA sequence from clone CH211-285O8 in linkage group 19,
             complete sequence
          Length = 107162

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   ccgtggccagcaggtggcgc 239
             ||||||||||||||||||||
Sbjct: 44399 ccgtggccagcaggtggcgc 44418
to top
>emb|BX890540.5| Zebrafish DNA sequence from clone DKEY-211C3 in linkage group 19,
              complete sequence
          Length = 170919

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 220    ccgtggccagcaggtggcgc 239
              ||||||||||||||||||||
Sbjct: 142522 ccgtggccagcaggtggcgc 142503
to top
>dbj|AK063136.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-G02, full
           insert sequence
          Length = 705

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 89/112 (79%)
 Strand = Plus / Plus

                                                                       
Query: 240 gagctccacggcgagaactcgtgggatgggctcctggaccctctggacccgcacctccgc 299
           ||||||||||||||| ||   ||| | || ||||| |||||||| ||| |  ||||||| 
Sbjct: 170 gagctccacggcgaggaccactggaagggcctcctcgaccctctcgacgccgacctccgg 229

                                                               
Query: 300 tccagcatcatctcctacggcgagatggtgcaggccgcctacgacgggttca 351
             |||| |||||  |||||||||| ||| ||||||| || |||||| |||||
Sbjct: 230 cgcagcgtcatcggctacggcgagctggcgcaggccaccaacgacgcgttca 281
to top
>emb|BX005369.11| Zebrafish DNA sequence from clone CH211-51H13 in linkage group 3,
             complete sequence
          Length = 187523

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   ccgtggccagcaggtggcgc 239
             ||||||||||||||||||||
Sbjct: 29181 ccgtggccagcaggtggcgc 29200
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    cgccgccggcgccggcgcgc 209
              ||||||||||||||||||||
Sbjct: 854799 cgccgccggcgccggcgcgc 854780
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 402     gacctgctcgccggcgtcgg 421
               ||||||||||||||||||||
Sbjct: 2527728 gacctgctcgccggcgtcgg 2527747
to top
>emb|BX897744.17| Zebrafish DNA sequence from clone DKEY-168A10 in linkage group 3,
             complete sequence
          Length = 144823

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   ccgtggccagcaggtggcgc 239
             ||||||||||||||||||||
Sbjct: 70521 ccgtggccagcaggtggcgc 70502



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 220  ccgtggccagcaggtggcgc 239
            ||||||||||||||||||||
Sbjct: 5414 ccgtggccagcaggtggcgc 5395
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 191      gccgccggcgccggcgcgcgtcct 214
                |||| |||||||||||||||||||
Sbjct: 25495874 gccgacggcgccggcgcgcgtcct 25495897
to top
>emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa0070E09 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 144084

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 191    gccgccggcgccggcgcgcgtcct 214
              |||| |||||||||||||||||||
Sbjct: 137080 gccgacggcgccggcgcgcgtcct 137103
to top
>gb|AF039653.1|AF039653 Agrobacterium tumefaciens membrane-fusion protein (ifeA),
            transmembrane efflux pump protein (ifeB), and regulatory
            protein (ifeR) genes, complete cds
          Length = 5806

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 193  cgccggcgccggcgcgcgtc 212
            ||||||||||||||||||||
Sbjct: 4782 cgccggcgccggcgcgcgtc 4801
to top
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 127003

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 191    gccgccggcgccggcgcgcgtcct 214
              |||| |||||||||||||||||||
Sbjct: 106020 gccgacggcgccggcgcgcgtcct 105997
to top
>emb|BX465207.14| Zebrafish DNA sequence from clone DKEY-103I16 in linkage group 18,
             complete sequence
          Length = 265632

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   ccgtggccagcaggtggcgc 239
             ||||||||||||||||||||
Sbjct: 23725 ccgtggccagcaggtggcgc 23706
to top
>gb|U63000.1|CJU63000 Callithrix jacchus T-cell receptor beta chain mRNA, partial cds
          Length = 401

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 265 atgggctcctggaccctctg 284
           ||||||||||||||||||||
Sbjct: 1   atgggctcctggaccctctg 20
to top
>gb|M14264.1|HUMTCBVF Human T-cell receptor rearranged beta-chain V-region (V-D-J) mRNA,
           clone ph8
          Length = 402

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 265 atgggctcctggaccctctg 284
           ||||||||||||||||||||
Sbjct: 1   atgggctcctggaccctctg 20
to top
>gb|K02546.1|HUMTCBVA Human T-cell receptor germline beta-chain V-region gene
          Length = 519

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 265 atgggctcctggaccctctg 284
           ||||||||||||||||||||
Sbjct: 1   atgggctcctggaccctctg 20
to top
>gb|M81773.1|HUMIGTCBCA Human (clone 8B3) T-cell receptor rearranged beta-chain mRNA
           V-D-J-C region, 5' end
          Length = 509

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 265 atgggctcctggaccctctg 284
           ||||||||||||||||||||
Sbjct: 51  atgggctcctggaccctctg 70
to top
>emb|X58323.1|HSTCRBM1 H.sapiens TCRB CK10 mRNA
          Length = 399

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 265 atgggctcctggaccctctg 284
           ||||||||||||||||||||
Sbjct: 1   atgggctcctggaccctctg 20
to top
>emb|X07222.1|HSTCBV82 Human T-cell receptor V-beta 8.2 gene
          Length = 772

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 265 atgggctcctggaccctctg 284
           ||||||||||||||||||||
Sbjct: 266 atgggctcctggaccctctg 285
to top
>emb|X04925.1|HSTCRB06 Human mRNA for T-cell receptor beta-chain (clone HBVP41) (Family
           Member: V beta 8.3)
          Length = 281

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 265 atgggctcctggaccctctg 284
           ||||||||||||||||||||
Sbjct: 1   atgggctcctggaccctctg 20


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,668,051
Number of Sequences: 3902068
Number of extensions: 2668051
Number of successful extensions: 77765
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 72314
Number of HSP's gapped (non-prelim): 5468
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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