ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet74b11 |
|---|---|
| Clone Library Name | barley_pub |
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 61.2 bits (147), Expect = 6e-10 Identities = 34/73 (46%), Positives = 44/73 (60%) Frame = +3 Query: 96 LVALAMVASSCFLAVSGQKFNAIYSFGDSMSDTGNLCVNGPPAGLTLTQPPYGETFFGRA 275 +++LA + +C F AI++FGDS SDTG G A PPYGETFF R+ Sbjct: 20 MLSLAYASETC-------DFPAIFNFGDSNSDTG-----GKAAAFYPLNPPYGETFFHRS 67 Query: 276 TCRCSDGRLVVDF 314 T R SDGRL++DF Sbjct: 68 TGRYSDGRLIIDF 80
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 52.4 bits (124), Expect = 3e-07 Identities = 28/54 (51%), Positives = 33/54 (61%) Frame = +3 Query: 153 FNAIYSFGDSMSDTGNLCVNGPPAGLTLTQPPYGETFFGRATCRCSDGRLVVDF 314 F AI++FGDS SDTG L AG PP+G +FFG R DGRLV+DF Sbjct: 28 FPAIFNFGDSNSDTGGLSAAFGQAG-----PPHGSSFFGSPAGRYCDGRLVIDF 76
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 37.4 bits (85), Expect = 0.010 Identities = 35/104 (33%), Positives = 45/104 (43%), Gaps = 1/104 (0%) Frame = +3 Query: 6 PPNLPSVERSLLPLPVLRASQPATMASSPLLVALAMVASSCFLAVSGQKFNAIYSFGDSM 185 PP P+ + P P + S P A SP A S + A++ FGDS+ Sbjct: 75 PPPSPAPKPVPPPSPSPKPSPPKPPAPSPKPSPPKPPAPSP-PKPQNKTIPAVFFFGDSI 133 Query: 186 SDTGNLCVNGPPAGLTLTQPPYGETF-FGRATCRCSDGRLVVDF 314 DTGN N L PYG F G AT R S+GR+ D+ Sbjct: 134 FDTGN--NNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDY 175
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 32.0 bits (71), Expect = 0.40 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +3 Query: 159 AIYSFGDSMSDTGNLCVNGPPAGLTLTQPPYGETF-FGRATCRCSDGRLVVDF 314 A++ FGDS+ DTGN N + PYG F F AT R S+G + D+ Sbjct: 204 AVFFFGDSVFDTGN--NNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDY 254
>GCAT_AERHY (P10480) Phosphatidylcholine-sterol acyltransferase precursor (EC| 2.3.1.43) (Glycerophospholipid-cholesterol acyltransferase) (GCAT) Length = 335 Score = 32.0 bits (71), Expect = 0.40 Identities = 21/54 (38%), Positives = 27/54 (50%) Frame = +3 Query: 105 LAMVASSCFLAVSGQKFNAIYSFGDSMSDTGNLCVNGPPAGLTLTQPPYGETFF 266 L +VA + A S F+ I FGDS+SDTG + G + PPY E F Sbjct: 9 LGLVALTVQAADSRPAFSRIVMFGDSLSDTGKM--YSKMRGYLPSSPPYYEGRF 60
>ESTA_PSEPU (Q6B6R8) Esterase estA precursor (EC 3.1.1.1)| Length = 646 Score = 31.6 bits (70), Expect = 0.53 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +3 Query: 78 MASSPLLVALAMVASSCFLAVSGQKFNAIYSFGDSMSDTGNLCVNGPPAGLT 233 MA PL+ A + + S + ++ + FGDS+SD G PAG T Sbjct: 4 MALKPLVAACLLASLSTAPQAAPSPYSTLVVFGDSLSDAGQFPDPAGPAGST 55
>ESTA_PSEAE (O33407) Esterase estA precursor (EC 3.1.1.1)| Length = 646 Score = 31.6 bits (70), Expect = 0.53 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +3 Query: 78 MASSPLLVALAMVASSCFLAVSGQKFNAIYSFGDSMSDTGNLCVNGPPAGLT 233 MA PL+ A + + S + ++ + FGDS+SD G PAG T Sbjct: 4 MALKPLVAACLLASLSTAPQAAPSPYSTLVVFGDSLSDAGQFPDPAGPAGST 55
>TSP17_CAEEL (Q11098) Tetraspanin-17| Length = 243 Score = 30.4 bits (67), Expect = 1.2 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = +1 Query: 40 SHSRCSELASQRQWRRP-RCSWRLRWWPRHASW 135 S++RC ++ + RQWR CS RL W W Sbjct: 174 SYARCQQIGANRQWRHAVGCSERLMSWFNEQIW 206
>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 645 Score = 29.6 bits (65), Expect = 2.0 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +3 Query: 96 LVALAMVASSCFLAVSGQKFNAIYSFGDSMSDTGN 200 + A M+A S + +N +Y FGDS+SD GN Sbjct: 6 IFAPGMLALSISAISNAHAYNNLYVFGDSLSDGGN 40
>PCDGB_PANTR (Q5DRC0) Protocadherin gamma A11 precursor (PCDH-gamma-A11)| Length = 935 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/69 (26%), Positives = 33/69 (47%) Frame = +3 Query: 105 LAMVASSCFLAVSGQKFNAIYSFGDSMSDTGNLCVNGPPAGLTLTQPPYGETFFGRATCR 284 LA + +S F+ V G + +F + S +L + + L QP YG+T + +C Sbjct: 733 LAGMPTSHFVGVDG-----VQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCE 787 Query: 285 CSDGRLVVD 311 S+ L+ + Sbjct: 788 KSEPLLIAE 796
>PCDGB_HUMAN (Q9Y5H2) Protocadherin gamma A11 precursor (PCDH-gamma-A11)| Length = 935 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/69 (26%), Positives = 33/69 (47%) Frame = +3 Query: 105 LAMVASSCFLAVSGQKFNAIYSFGDSMSDTGNLCVNGPPAGLTLTQPPYGETFFGRATCR 284 LA + +S F+ V G + +F + S +L + + L QP YG+T + +C Sbjct: 733 LAGMPTSHFVGVDG-----VQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCE 787 Query: 285 CSDGRLVVD 311 S+ L+ + Sbjct: 788 KSEPLLIAE 796
>S28A1_RABIT (Q9MZT2) Sodium/nucleoside cotransporter 1 (Na(+)/nucleoside| cotransporter 1) (Sodium-coupled nucleoside transporter 1) (Concentrative nucleoside transporter 1) (CNT 1) Length = 658 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 10/70 (14%) Frame = +3 Query: 78 MASSPLLVA----------LAMVASSCFLAVSGQKFNAIYSFGDSMSDTGNLCVNGPPAG 227 M +PLL+ + V +S F +SG A SFG S + V G P Sbjct: 314 MTEAPLLIRPYLADLTLSEIHAVMTSGFATISGTVLGAFISFGIDASSLISASVMGAPCA 373 Query: 228 LTLTQPPYGE 257 L L++ Y E Sbjct: 374 LALSKLVYPE 383
>Y1460_METJA (Q58855) Hypothetical protein MJ1460| Length = 162 Score = 27.7 bits (60), Expect = 7.6 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = +3 Query: 147 QKFNAIYSFGDSMSDTGNLCVNGPPAGLTLTQPPY 251 +K + +FGD D + + PP + L+ PPY Sbjct: 72 KKIFKLMNFGDLEIDENKILLKNPPYKIKLSNPPY 106
>HSBH1_SOYBN (P46608) Homeobox protein SBH1| Length = 379 Score = 27.7 bits (60), Expect = 7.6 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = +1 Query: 106 LRWWPRHASWPCPARN 153 L WW RH WP P+ + Sbjct: 299 LEWWNRHYKWPYPSES 314
>B2L12_HUMAN (Q9HB09) Bcl-2-related proline-rich protein (Bcl-2-like 12 protein)| Length = 334 Score = 27.7 bits (60), Expect = 7.6 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +1 Query: 76 QWRRPRCSWRLRWW 117 QWRRP+ WR R W Sbjct: 64 QWRRPQVEWRRRRW 77
>TUAB_BACSU (O32273) Teichuronic acid biosynthesis protein tuaB| Length = 483 Score = 27.7 bits (60), Expect = 7.6 Identities = 20/70 (28%), Positives = 33/70 (47%) Frame = +3 Query: 27 ERSLLPLPVLRASQPATMASSPLLVALAMVASSCFLAVSGQKFNAIYSFGDSMSDTGNLC 206 E S++ L ++ + S PLL+ L V+ + AV G+K+ A + ++ G L Sbjct: 279 ENSVIREGFLNMTKMLALVSFPLLIGLVSVSDAFITAVFGEKWLAAVPILNVLAIVGILR 338 Query: 207 VNGPPAGLTL 236 V P G L Sbjct: 339 VLMNPNGSVL 348
>YCF1B_ANTFO (Q85B66) Hypothetical 121 kDa protein ycf1 (ORF1031)| Length = 1031 Score = 27.7 bits (60), Expect = 7.6 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 4/42 (9%) Frame = +1 Query: 37 YSHSRCSELASQRQWRRPRCSWRLRWWP----RHASWPCPAR 150 +S + S+ +S +W+ R SW + WP + W P R Sbjct: 232 FSMKKSSDESSLNEWKAERLSWLYKPWPTSLFNYRKWNRPLR 273
>HUNB_DROCR (O46236) Protein hunchback (Fragments)| Length = 190 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +3 Query: 6 PPNLPSVERSLLPLPVLRASQPATMASSPLLVALAMVA 119 PP LP+ + ++P + A+QP ++P + A+VA Sbjct: 103 PPGLPNPMQIIMPANMRPATQPTPTIATPTTTSSAIVA 140
>NLGN2_HUMAN (Q8NFZ4) Neuroligin-2 precursor| Length = 835 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -3 Query: 289 EQRQVARPKKVSP*GGWVRVRPAGGPLTQRLPVSDMESP 173 ++RQ R +++SP GG P GGPL LP + E P Sbjct: 702 DRRQELRCRRLSPPGGSGSGVPGGGPL---LPAAGRELP 737
>NLGN2_RAT (Q62888) Neuroligin-2 precursor| Length = 836 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -3 Query: 289 EQRQVARPKKVSP*GGWVRVRPAGGPLTQRLPVSDMESP 173 ++RQ R +++SP GG P GGPL LP + E P Sbjct: 703 DRRQELRCRRLSPPGGSGSGVPGGGPL---LPTAGRELP 738
>NGLN2_MOUSE (Q69ZK9) Neuroligin-2 precursor| Length = 836 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -3 Query: 289 EQRQVARPKKVSP*GGWVRVRPAGGPLTQRLPVSDMESP 173 ++RQ R +++SP GG P GGPL LP + E P Sbjct: 703 DRRQELRCRRLSPPGGSGSGVPGGGPL---LPTAGRELP 738
>YTRP_PSEPU (P40604) Hypothetical 62.7 kDa protein in trpE-trpG intergenic| region precursor Length = 592 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%) Frame = +3 Query: 78 MASSPLL----VALAMVASSCFLAVSGQKFNAIYSFGDSMSDTG 197 M +PLL +LA+ S F A S ++ + FGDS+SD G Sbjct: 1 MRKAPLLRFTLASLALACSQAFAAPS--PYSGMIVFGDSLSDAG 42
>HLT_VIBPA (Q99289) Thermolabile hemolysin precursor (TL) (Lecithin-dependent| haemolysin) (LDH) (Atypical phospholipase) (Phospholipase A2) (Lysophospholipase) Length = 418 Score = 27.3 bits (59), Expect = 9.9 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +3 Query: 135 AVSGQKFNAIYSFGDSMSDTGNL 203 A+ + N + + GDS+SDTGN+ Sbjct: 138 AMQPDQINKVVALGDSLSDTGNI 160
>HUNB_SCAAL (O46254) Protein hunchback (Fragments)| Length = 171 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +3 Query: 6 PPNLPSVERSLLPLPVLRASQPATMASSPLLVALAMVA 119 PP LP+ + ++P + A+QP ++P + A+VA Sbjct: 84 PPGLPNPMQIIMPANMRPATQPTPTIATPTTTSSAIVA 121 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,410,326 Number of Sequences: 219361 Number of extensions: 612797 Number of successful extensions: 2606 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 2439 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2603 length of database: 80,573,946 effective HSP length: 80 effective length of database: 63,025,066 effective search space used: 1512601584 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
