ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet74b04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X84308.1|HVLHCA2 H.vulgare mRNA for photosysteme I antenna protein Length = 1050 Score = 317 bits (160), Expect = 6e-84 Identities = 167/168 (99%), Gaps = 1/168 (0%) Strand = Plus / Plus Query: 16 gcgcgcgcctccccccgctacaggcacagccggccagcgagcgcgcgcactggtgcagca 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18 gcgcgcgcctccccccgctacaggcacagccggccagcgagcgcgcgcactggtgcagca 77 Query: 76 acgatggcgctggtctcctcctcctccgcc-ccgccgtcgcggcgctccccagcaacggg 134 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 78 acgatggcgctggtctcctcctcctccgccaccgccgtcgcggcgctccccagcaacggg 137 Query: 135 ctggccggcgcccggacctccttcctcggcgctgccggcaaggcggcc 182 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 ctggccggcgcccggacctccttcctcggcgctgccggcaaggcggcc 185
>emb|X79277.1|LTLHAB L.temulentum lhaB mRNA Length = 1026 Score = 123 bits (62), Expect = 2e-25 Identities = 84/90 (93%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 76 acgatggcgctggtctcctcctcctccgcc-ccgccgtcgcggcgctccccagcaacggg 134 ||||||||||| ||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct: 40 acgatggcgctagtctcctcctcctccgctgccaccgtcgcggcgctccccagcaatggg 99 Query: 135 ctggccggcgcccggacctccttcctcggc 164 ||||||||||| |||||||||||||||||| Sbjct: 100 ctggccggcgcacggacctccttcctcggc 129
>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1062 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 43 cctcctcctccaccaccgccgtcgcggcgctcccc 77
>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1059 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 44 cctcctcctccaccaccgccgtcgcggcgctcccc 78
>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1058 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 46 cctcctcctccaccaccgccgtcgcggcgctcccc 80
>ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1047 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 49 cctcctcctccaccaccgccgtcgcggcgctcccc 83
>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1061 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 49 cctcctcctccaccaccgccgtcgcggcgctcccc 83
>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1065 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 50 cctcctcctccaccaccgccgtcgcggcgctcccc 84
>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1069 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 50 cctcctcctccaccaccgccgtcgcggcgctcccc 84
>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1068 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 53 cctcctcctccaccaccgccgtcgcggcgctcccc 87
>gb|BT018872.1| Zea mays clone EL01N0563D01.d mRNA sequence Length = 1668 Score = 46.1 bits (23), Expect = 0.037 Identities = 26/27 (96%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgccgtcgcg 116 |||||||||||||||||||||| |||| Sbjct: 204 ctcctcctcctccgccccgccgccgcg 178
>gb|AC148989.4| Mus musculus BAC clone RP24-445D7 from chromosome 7, complete sequence Length = 194576 Score = 46.1 bits (23), Expect = 0.037 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 acaccacgcacgcacgcgcgcgc 23 ||||||||||||||||||||||| Sbjct: 118646 acaccacgcacgcacgcgcgcgc 118668
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 23304261 cctcctcctccaccaccgccgtcgcggcgctcccc 23304295 Score = 38.2 bits (19), Expect = 8.9 Identities = 28/31 (90%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgccgtcgcggcgc 120 ||||||||| ||| || |||||||||||||| Sbjct: 22361221 ctcctcctcatcctcctcgccgtcgcggcgc 22361191 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 cgcacgcgcgcgcctcccc 29 ||||||||||||||||||| Sbjct: 17418188 cgcacgcgcgcgcctcccc 17418206
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 59519 cctcctcctccaccaccgccgtcgcggcgctcccc 59553
>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full insert sequence Length = 1088 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 64 cctcctcctccaccaccgccgtcgcggcgctcccc 98
>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full insert sequence Length = 1069 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 50 cctcctcctccaccaccgccgtcgcggcgctcccc 84
>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full insert sequence Length = 1065 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 50 cctcctcctccaccaccgccgtcgcggcgctcccc 84
>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full insert sequence Length = 1080 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 80 cctcctcctccaccaccgccgtcgcggcgctcccc 114
>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full insert sequence Length = 1058 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 46 cctcctcctccaccaccgccgtcgcggcgctcccc 80
>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full insert sequence Length = 1061 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 49 cctcctcctccaccaccgccgtcgcggcgctcccc 83
>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full insert sequence Length = 1062 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 43 cctcctcctccaccaccgccgtcgcggcgctcccc 77
>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full insert sequence Length = 1059 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 44 cctcctcctccaccaccgccgtcgcggcgctcccc 78
>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full insert sequence Length = 1646 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 44 cctcctcctccaccaccgccgtcgcggcgctcccc 78
>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full insert sequence Length = 1068 Score = 46.1 bits (23), Expect = 0.037 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 92 cctcctcctccgcc-ccgccgtcgcggcgctcccc 125 ||||||||||| || |||||||||||||||||||| Sbjct: 53 cctcctcctccaccaccgccgtcgcggcgctcccc 87
>ref|XM_753666.1| Ustilago maydis 521 hypothetical protein (UM02612.1) partial mRNA Length = 2457 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Minus Query: 150 acctccttcctcggcgctgccg 171 |||||||||||||||||||||| Sbjct: 1905 acctccttcctcggcgctgccg 1884
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Plus Query: 90 ctcctcctcctccgccccgccg 111 |||||||||||||||||||||| Sbjct: 19098183 ctcctcctcctccgccccgccg 19098204 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 tcctcctcctccgccccgccgtcg 114 |||||||||||| ||||||||||| Sbjct: 24658619 tcctcctcctcctccccgccgtcg 24658596 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 gcgctggtctcctcctcctccgcc 105 ||||| |||||||||||||||||| Sbjct: 12846108 gcgctcgtctcctcctcctccgcc 12846085 Score = 38.2 bits (19), Expect = 8.9 Identities = 25/27 (92%) Strand = Plus / Minus Query: 89 tctcctcctcctccgccccgccgtcgc 115 |||||||||||||| || ||||||||| Sbjct: 19800139 tctcctcctcctcctcctcgccgtcgc 19800113 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 95 cctcctccgccccgccgtc 113 ||||||||||||||||||| Sbjct: 13178546 cctcctccgccccgccgtc 13178528 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 1783176 cacgcacgcacgcgcgcgc 1783158
>dbj|AB120735.1| Gryllus bimaculatus Gbhb mRNA for hunchback, complete cds Length = 2672 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 cagcaacgggctggccggcgcc 146 |||||||||||||||||||||| Sbjct: 475 cagcaacgggctggccggcgcc 496
>dbj|AP005470.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0043B22 Length = 158857 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Plus Query: 90 ctcctcctcctccgccccgccg 111 |||||||||||||||||||||| Sbjct: 1668 ctcctcctcctccgccccgccg 1689
>dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1616_B03 Length = 96081 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Plus Query: 90 ctcctcctcctccgccccgccg 111 |||||||||||||||||||||| Sbjct: 95667 ctcctcctcctccgccccgccg 95688
>dbj|AK069974.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036M01, full insert sequence Length = 1075 Score = 44.1 bits (22), Expect = 0.15 Identities = 25/26 (96%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgccgtcgc 115 ||||||||||||||| |||||||||| Sbjct: 106 ctcctcctcctccgcgccgccgtcgc 81
>gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1576_F01, complete sequence Length = 119525 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgccgtcg 114 |||||||||||||||| |||||||| Sbjct: 112667 ctcctcctcctccgcctcgccgtcg 112643
>ref|XM_475349.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 735 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgccgtcg 114 |||||||||||||||| |||||||| Sbjct: 231 ctcctcctcctccgcctcgccgtcg 207
>ref|NM_185090.1| Oryza sativa (japonica cultivar-group), mRNA Length = 691 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 tcctcctcctccgccccgccg 111 ||||||||||||||||||||| Sbjct: 41 tcctcctcctccgccccgccg 61
>gb|AC093919.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_D01, complete sequence Length = 112761 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgccgtcg 114 |||||||||||||||| |||||||| Sbjct: 18162 ctcctcctcctccgcctcgccgtcg 18138
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 tcctcctcctccgccccgccg 111 ||||||||||||||||||||| Sbjct: 34588113 tcctcctcctccgccccgccg 34588093 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 ccccgccgtcgcggcgctc 122 ||||||||||||||||||| Sbjct: 34023563 ccccgccgtcgcggcgctc 34023581 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 gtctcctcctcctccgccc 106 ||||||||||||||||||| Sbjct: 17798033 gtctcctcctcctccgccc 17798015 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 tggtctcctcctcctccgc 104 ||||||||||||||||||| Sbjct: 9160345 tggtctcctcctcctccgc 9160363 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 cacgcgcgcgcctcccccc 31 ||||||||||||||||||| Sbjct: 9024732 cacgcgcgcgcctcccccc 9024714 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 2119653 cacgcacgcacgcgcgcgc 2119671
>emb|Z98049.1|HS427A4 Human DNA sequence from clone RP3-427A4 on chromosome 6q26-27 Contains the 5' end of the RPS6KA2 gene for ribosomal protein S6 kinase, 90kD, polypeptide 2 (RSK3), the gene for a novel protein and a CpG island, complete sequence Length = 149466 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgcc 110 ||||||||||||||||||||| Sbjct: 25397 ctcctcctcctccgccccgcc 25377
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete sequence Length = 164236 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 tcctcctcctccgccccgccg 111 ||||||||||||||||||||| Sbjct: 45830 tcctcctcctccgccccgccg 45810
>gb|AY033236.1| Propionibacterium freudenreichii subsp. shermanii cobalamin biosynthesis locus, partial sequence Length = 11639 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 ttcctcggcgctgccggcaaggcgg 180 |||||||||| |||||||||||||| Sbjct: 8125 ttcctcggcgatgccggcaaggcgg 8149
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 tcctcctcctccgccccgccg 111 ||||||||||||||||||||| Sbjct: 130285 tcctcctcctccgccccgccg 130305
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 tcctcctcctccgccccgccg 111 ||||||||||||||||||||| Sbjct: 20867886 tcctcctcctccgccccgccg 20867906 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 13931226 cacgcacgcacgcgcgcgc 13931244
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgccgtcg 114 |||||||||||||||| |||||||| Sbjct: 22064181 ctcctcctcctccgcctcgccgtcg 22064157 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 tctcctcctcctccgccccgccgt 112 ||||||||||| |||||||||||| Sbjct: 15972417 tctcctcctccaccgccccgccgt 15972394 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 27363192 cacgcacgcacgcgcgcgc 27363174 Score = 38.2 bits (19), Expect = 8.9 Identities = 28/31 (90%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgccgtcgcggcgc 120 ||||||||| ||| || |||||||||||||| Sbjct: 18684454 ctcctcctcgtcctcctcgccgtcgcggcgc 18684424
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 tcctcctcctccgccccgccg 111 ||||||||||||||||||||| Sbjct: 34678185 tcctcctcctccgccccgccg 34678165 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 ccccgccgtcgcggcgctc 122 ||||||||||||||||||| Sbjct: 34114035 ccccgccgtcgcggcgctc 34114053 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 gtctcctcctcctccgccc 106 ||||||||||||||||||| Sbjct: 17791574 gtctcctcctcctccgccc 17791556 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 tggtctcctcctcctccgc 104 ||||||||||||||||||| Sbjct: 9158178 tggtctcctcctcctccgc 9158196 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 cacgcgcgcgcctcccccc 31 ||||||||||||||||||| Sbjct: 9022565 cacgcgcgcgcctcccccc 9022547 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 2119665 cacgcacgcacgcgcgcgc 2119683
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete sequence Length = 129302 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 tcctcctcctccgccccgccg 111 ||||||||||||||||||||| Sbjct: 55220 tcctcctcctccgccccgccg 55240
>dbj|AK107563.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-C02, full insert sequence Length = 827 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 tcctcctcctccgccccgccg 111 ||||||||||||||||||||| Sbjct: 51 tcctcctcctccgccccgccg 71
>dbj|AK102413.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093B10, full insert sequence Length = 1637 Score = 42.1 bits (21), Expect = 0.57 Identities = 24/25 (96%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgccgtcg 114 |||||||||||||||| |||||||| Sbjct: 643 ctcctcctcctccgcctcgccgtcg 619
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 tcctcctcctccgccccgccg 111 ||||||||||||||||||||| Sbjct: 20879150 tcctcctcctccgccccgccg 20879170 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 13938568 cacgcacgcacgcgcgcgc 13938586
>gb|AC122881.4| Mus musculus BAC clone RP23-79J21 from 13, complete sequence Length = 221931 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgcct 25 ||||||||||||||||||||| Sbjct: 111743 cacgcacgcacgcgcgcgcct 111723
>ref|NM_183590.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1785 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgccgtc 113 ||||||||||||| |||||||||| Sbjct: 90 ctcctcctcctcctccccgccgtc 67
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 gcaacgggctggccggcgcc 146 |||||||||||||||||||| Sbjct: 1548166 gcaacgggctggccggcgcc 1548147
>gb|AC135417.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1314_A05, complete sequence Length = 109853 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 tctcctcctcctccgccccgccgt 112 ||||||||||| |||||||||||| Sbjct: 86082 tctcctcctccaccgccccgccgt 86059
>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11, complete sequence Length = 177574 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 tctcctcctcctccgccccgccgt 112 ||||||||||| |||||||||||| Sbjct: 58168 tctcctcctccaccgccccgccgt 58145
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ctcctcctcctccgccccgc 109 |||||||||||||||||||| Sbjct: 438507 ctcctcctcctccgccccgc 438526
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 cgccccgccgtcgcggcgctcccc 125 |||||||||||||||| ||||||| Sbjct: 1444029 cgccccgccgtcgcggtgctcccc 1444052
>gb|AC118259.10| Mus musculus chromosome 15, clone RP24-352J7, complete sequence Length = 146572 Score = 40.1 bits (20), Expect = 2.3 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgc-gcctcccccc 31 ||||||||||||||||| |||||||||| Sbjct: 93265 cacgcacgcacgcgcgcggcctcccccc 93292
>gb|AC093136.3| Pan troglodytes clone RP43-116L11, complete sequence Length = 179629 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 gatggcgctggtctcctcctcctc 101 |||||| ||||||||||||||||| Sbjct: 88126 gatggccctggtctcctcctcctc 88103
>gb|AC134572.4| Mus musculus BAC clone RP23-435M15 from chromosome 3, complete sequence Length = 202037 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgcc 24 |||||||||||||||||||| Sbjct: 103583 cacgcacgcacgcgcgcgcc 103564
>gb|AC006330.5| Homo sapiens BAC clone RP11-229D13 from 7, complete sequence Length = 96299 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 gatggcgctggtctcctcctcctc 101 |||||| ||||||||||||||||| Sbjct: 12947 gatggccctggtctcctcctcctc 12970
>gb|AC126046.3| Mus musculus BAC clone RP23-176P24 from chromosome 19, complete sequence Length = 240536 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ccacgcacgcacgcgcgcgc 23 |||||||||||||||||||| Sbjct: 388 ccacgcacgcacgcgcgcgc 369
>gb|AC140781.3| Mus musculus BAC clone RP24-497M1 from chromosome 19, complete sequence Length = 131111 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ccacgcacgcacgcgcgcgc 23 |||||||||||||||||||| Sbjct: 125522 ccacgcacgcacgcgcgcgc 125503
>ref|XM_754388.1| Ustilago maydis 521 hypothetical protein (UM03334.1) partial mRNA Length = 1479 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ccttcctcggcgctgccggc 173 |||||||||||||||||||| Sbjct: 25 ccttcctcggcgctgccggc 44
>ref|XM_566508.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNA01630) partial mRNA Length = 1523 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ctcctcctcctccgccccgc 109 |||||||||||||||||||| Sbjct: 127 ctcctcctcctccgccccgc 146
>emb|CR727941.1|CNS0GOMJ Tetraodon nigroviridis full-length cDNA Length = 1039 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tcctccgccccgccgtcgcg 116 |||||||||||||||||||| Sbjct: 302 tcctccgccccgccgtcgcg 283
>gb|AC153583.10| Mus musculus 6 BAC RP23-349K15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196821 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 atggcgctggtctcctcctcctcc 102 ||||| |||||||||||||||||| Sbjct: 19864 atggccctggtctcctcctcctcc 19887
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 cgccccgccgtcgcggcgctcccc 125 |||||||||||||||| ||||||| Sbjct: 61444 cgccccgccgtcgcggtgctcccc 61467
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 cgccccgccgtcgcggcgctcccc 125 |||||||||||||||| ||||||| Sbjct: 127936 cgccccgccgtcgcggtgctcccc 127959
>tpg|BK005012.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 9 (WRKY9) gene, complete cds Length = 8241 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgccgtc 113 ||||||||||||| |||||||||| Sbjct: 90 ctcctcctcctcctccccgccgtc 67
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tcctccgccccgccgtcgcg 116 |||||||||||||||||||| Sbjct: 5416250 tcctccgccccgccgtcgcg 5416269 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 94 tcctcctccgccccgccgt 112 ||||||||||||||||||| Sbjct: 147447 tcctcctccgccccgccgt 147465
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgccgtc 113 ||||||||||||| |||||||||| Sbjct: 10468725 ctcctcctcctcctccccgccgtc 10468702 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 38610009 cacgcacgcacgcgcgcgc 38609991 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 30363421 cacgcacgcacgcgcgcgc 30363439 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 28587638 cacgcacgcacgcgcgcgc 28587620 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 87 ggtctcctcctcctccgccccgc 109 |||| |||||||||||||||||| Sbjct: 27976233 ggtcccctcctcctccgccccgc 27976255 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 ggtctcctcctcctccgcc 105 ||||||||||||||||||| Sbjct: 27484987 ggtctcctcctcctccgcc 27485005 Score = 38.2 bits (19), Expect = 8.9 Identities = 26/27 (96%), Gaps = 1/27 (3%) Strand = Plus / Plus Query: 90 ctcctcctcctccgcc-ccgccgtcgc 115 |||||||||||||||| |||||||||| Sbjct: 3404486 ctcctcctcctccgccgccgccgtcgc 3404512 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 ccccgccgtcgcggcgctc 122 ||||||||||||||||||| Sbjct: 3396582 ccccgccgtcgcggcgctc 3396600
>gb|AC022210.8| Homo sapiens BAC clone RP11-617F9 from 2, complete sequence Length = 164846 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgcc 24 |||||||||||||||||||| Sbjct: 129935 cacgcacgcacgcgcgcgcc 129916
>gb|AC153983.7| Mus musculus 6 BAC RP24-479J14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 178303 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 atggcgctggtctcctcctcctcc 102 ||||| |||||||||||||||||| Sbjct: 148504 atggccctggtctcctcctcctcc 148527
>gb|AC154549.2| Mus musculus BAC clone RP23-443L15 from chromosome 17, complete sequence Length = 191523 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cgctggtctcctcctcctcc 102 |||||||||||||||||||| Sbjct: 143475 cgctggtctcctcctcctcc 143494
>gb|AC127464.3| Ornithorhynchus anatinus clone OA_Bb-383O11, complete sequence Length = 161148 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tctcctcctcctccgccccg 108 |||||||||||||||||||| Sbjct: 76101 tctcctcctcctccgccccg 76082
>dbj|AP002480.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0469E05 Length = 160769 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgccgtc 113 ||||||||||||| |||||||||| Sbjct: 113685 ctcctcctcctcctccccgccgtc 113662
>gb|AF395201.1| Pseudomonas mendocina sub_clone 2 gene sequence Length = 534 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agccggccagcgagcgcgcg 62 |||||||||||||||||||| Sbjct: 7 agccggccagcgagcgcgcg 26
>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 105645 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tcctccgccccgccgtcgcg 116 |||||||||||||||||||| Sbjct: 88266 tcctccgccccgccgtcgcg 88285
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ccgccccgccgtcgcggcgc 120 |||||||||||||||||||| Sbjct: 3721852 ccgccccgccgtcgcggcgc 3721833
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 tcctcctcctccgccccgccgtcg 114 |||||||||||| ||||||||||| Sbjct: 141812 tcctcctcctcctccccgccgtcg 141789
>dbj|AP004325.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1230_H04 Length = 123818 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 gcgctggtctcctcctcctccgcc 105 ||||| |||||||||||||||||| Sbjct: 18595 gcgctcgtctcctcctcctccgcc 18572
>emb|X61696.1|PRVGHG Pseudorabies virus gH gene for glycoprotein H Length = 2484 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgccgtc 113 |||||||||||||||||| ||||| Sbjct: 1645 ctcctcctcctccgcccccccgtc 1622
>dbj|AK107021.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-A01, full insert sequence Length = 1128 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 tcctcctcctccgccccgccgtcg 114 |||||||||||| ||||||||||| Sbjct: 327 tcctcctcctcctccccgccgtcg 304
>gb|AC154676.2| Mus musculus BAC clone RP23-146O19 from 17, complete sequence Length = 180352 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cgctggtctcctcctcctcc 102 |||||||||||||||||||| Sbjct: 75126 cgctggtctcctcctcctcc 75145
>dbj|AK067924.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122H17, full insert sequence Length = 769 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 gcgctggtctcctcctcctccgcc 105 ||||| |||||||||||||||||| Sbjct: 287 gcgctcgtctcctcctcctccgcc 264
>gb|AC122529.5| Mus musculus BAC clone RP24-511F2 from 3, complete sequence Length = 159294 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgcc 24 |||||||||||||||||||| Sbjct: 41105 cacgcacgcacgcgcgcgcc 41124
>dbj|AK064169.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-A02, full insert sequence Length = 826 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 tctcctcctcctccgccccgccgt 112 ||||||||||| |||||||||||| Sbjct: 178 tctcctcctccaccgccccgccgt 155
>gb|AC106833.10| Mus musculus chromosome 19, clone RP24-503K22, complete sequence Length = 180887 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgcc 24 |||||||||||||||||||| Sbjct: 159442 cacgcacgcacgcgcgcgcc 159461
>gb|AC154560.3| Mus musculus BAC clone RP23-400E20 from chromosome 17, complete sequence Length = 197657 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgcctccc 28 ||||||||||||||||||| |||| Sbjct: 113504 cacgcacgcacgcgcgcgcatccc 113527
>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome Length = 1138011 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ccacgcacgcacgcgcgcgc 23 |||||||||||||||||||| Sbjct: 177049 ccacgcacgcacgcgcgcgc 177030
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cctcctcctccgccccgccg 111 |||||||||||||||||||| Sbjct: 2244099 cctcctcctccgccccgccg 2244118
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tcctccgccccgccgtcgcg 116 |||||||||||||||||||| Sbjct: 5416239 tcctccgccccgccgtcgcg 5416258 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 94 tcctcctccgccccgccgt 112 ||||||||||||||||||| Sbjct: 147447 tcctcctccgccccgccgt 147465
>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141841 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tcctccgccccgccgtcgcg 116 |||||||||||||||||||| Sbjct: 49558 tcctccgccccgccgtcgcg 49539
>gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protein (Lhca) mRNA, complete cds Length = 1066 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 ccgccgtcgcggcgctcccc 125 |||||||||||||||||||| Sbjct: 35 ccgccgtcgcggcgctcccc 54
>dbj|AB215291.1| Equus caballus DNA, microsatellite TKY1348 Length = 517 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ccacgcacgcacgcgcgcgc 23 |||||||||||||||||||| Sbjct: 99 ccacgcacgcacgcgcgcgc 118
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003A09, complete sequence Length = 167222 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 157076 cacgcacgcacgcgcgcgc 157094
>gb|AC118646.23| Mus musculus chromosome 15, clone RP24-116A18, complete sequence Length = 205272 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 154243 cacgcacgcacgcgcgcgc 154225
>gb|AY118081.2| Streptomyces sp. KCTC 0041BP dihydrochalcomyin biosynthesis gene cluster, complete sequence Length = 75439 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 ggcgctggtctcctcctcc 99 ||||||||||||||||||| Sbjct: 16446 ggcgctggtctcctcctcc 16428
>gb|AC137855.14| Mus musculus chromosome 16, clone RP24-444E8, complete sequence Length = 196783 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 193186 cacgcacgcacgcgcgcgc 193204
>gb|AC152952.1| Mus musculus 6 BAC RP23-86B3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187484 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 147041 cacgcacgcacgcgcgcgc 147059
>gb|AC124828.14| Mus musculus chromosome 5, clone RP24-126A19, complete sequence Length = 188504 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 112532 cacgcacgcacgcgcgcgc 112550
>ref|NM_184517.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1366 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 ccccgccgtcgcggcgctc 122 ||||||||||||||||||| Sbjct: 144 ccccgccgtcgcggcgctc 162
>gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome 5, complete sequence Length = 245594 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 20857 cacgcacgcacgcgcgcgc 20839
>gb|AC167017.4| Mus musculus BAC clone RP24-86L13 from chromosome 9, complete sequence Length = 183068 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 22239 cacgcacgcacgcgcgcgc 22221
>gb|AC159266.3| Mus musculus BAC clone RP24-64D24 from chromosome 8, complete sequence Length = 212727 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 202481 cacgcacgcacgcgcgcgc 202499
>gb|AC166822.3| Mus musculus BAC clone RP24-117F20 from chromosome 14, complete sequence Length = 186860 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 73453 cacgcacgcacgcgcgcgc 73435
>gb|AC166169.2| Mus musculus BAC clone RP23-193F7 from chromosome 14, complete sequence Length = 235897 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 21184 cacgcacgcacgcgcgcgc 21202
>ref|XM_482755.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1032 Score = 38.2 bits (19), Expect = 8.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 90 ctcctcctcctccgccccgccgtcgcggcgc 120 ||||||||| ||| || |||||||||||||| Sbjct: 636 ctcctcctcgtcctcctcgccgtcgcggcgc 666
>ref|XM_470114.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1038 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 ccccgccgtcgcggcgctc 122 ||||||||||||||||||| Sbjct: 159 ccccgccgtcgcggcgctc 177
>ref|XM_467738.1| Oryza sativa (japonica cultivar-group), mRNA Length = 859 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 ctcctcctccgccccgccg 111 ||||||||||||||||||| Sbjct: 188 ctcctcctccgccccgccg 170
>ref|XM_466490.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1768 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 ctcctcctcctccgccccg 108 ||||||||||||||||||| Sbjct: 4 ctcctcctcctccgccccg 22
>ref|XM_465595.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1956 Score = 38.2 bits (19), Expect = 8.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 89 tctcctcctcctccgccccgccgtcgc 115 |||||||||||||| || ||||||||| Sbjct: 79 tctcctcctcctcctcctcgccgtcgc 105
>ref|XM_465597.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1448 Score = 38.2 bits (19), Expect = 8.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 89 tctcctcctcctccgccccgccgtcgc 115 |||||||||||||| || ||||||||| Sbjct: 77 tctcctcctcctcctcctcgccgtcgc 103
>ref|XM_464216.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 38.2 bits (19), Expect = 8.9 Identities = 29/31 (93%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 90 ctcctcctcctccgcc-ccgccgtcgcggcg 119 |||||||||||||||| |||||| ||||||| Sbjct: 324 ctcctcctcctccgccgccgccgccgcggcg 294
>ref|NM_190201.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 405 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 47 cacgcacgcacgcgcgcgc 29
>ref|NM_192157.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1335 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 751 cacgcacgcacgcgcgcgc 769
>ref|XM_530648.1| PREDICTED: Pan troglodytes LOC460761 (LOC460761), mRNA Length = 1195 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 cctcctcctccgccccgcc 110 ||||||||||||||||||| Sbjct: 374 cctcctcctccgccccgcc 392
>ref|XM_463407.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 921 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 ggtctcctcctcctccgcc 105 ||||||||||||||||||| Sbjct: 237 ggtctcctcctcctccgcc 255
>ref|XM_474572.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2262 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgccgt 112 ||||||||||||||||| ||||| Sbjct: 1887 ctcctcctcctccgccctgccgt 1865
>ref|XM_473458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2550 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tctcctcctcctccgcccc 107 ||||||||||||||||||| Sbjct: 223 tctcctcctcctccgcccc 205
>gb|AC122159.30| Mus musculus strain 129/Sv clone ct7-575j15 map 10, complete sequence Length = 183491 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 157603 cacgcacgcacgcgcgcgc 157621 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 142223 cacgcacgcacgcgcgcgc 142241
>gb|AC114653.11| Mus musculus chromosome 5, clone RP24-158G19, complete sequence Length = 164313 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 58928 cacgcacgcacgcgcgcgc 58946
>gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, complete sequence Length = 210808 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 13646 cacgcacgcacgcgcgcgc 13664
>gb|AC153147.7| Mus musculus BAC clone RP23-205D14 from chromosome 12, complete sequence Length = 206281 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 177927 cacgcacgcacgcgcgcgc 177945
>gb|AC111130.17| Mus musculus chromosome 5, clone RP23-339G19, complete sequence Length = 212923 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 138984 cacgcacgcacgcgcgcgc 139002
>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05, complete sequence Length = 178013 Score = 38.2 bits (19), Expect = 8.9 Identities = 28/31 (90%) Strand = Plus / Minus Query: 90 ctcctcctcctccgccccgccgtcgcggcgc 120 ||||||||| ||| || |||||||||||||| Sbjct: 157569 ctcctcctcgtcctcctcgccgtcgcggcgc 157539
>gb|AC161581.3| Mus musculus chromosome 15, clone RP24-75A19, complete sequence Length = 210059 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 50202 cacgcacgcacgcgcgcgc 50220
>gb|AF245699.1| Homo sapiens type 1 angiotensin II receptor (AGTR1) gene, complete cds Length = 60461 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 cctcctcctccgccccgcc 110 ||||||||||||||||||| Sbjct: 5672 cctcctcctccgccccgcc 5654
>gb|AF109719.2|MMHC188A7 Mus musculus casein kinase 2 beta subunit (gMCK2) gene, partial cds; BAT4, NG20 (NG20), BAT3, BAT2, AIF-1, B144, lymphotoxin beta, TNF, and TNF beta genes, complete cds; IKBL gene, partial cds; and unknown gene Length = 120990 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 82249 cacgcacgcacgcgcgcgc 82231
>gb|AF026198.1| Fugu rubripes neural cell adhesion molecule L1 homolog (L1-CAM) gene, complete cds; putative protein 1 (PUT1) gene, partial cds; mitosis-specific chromosome segregation protein SMC1 homolog (SMC1) gene, complete cds; and calcium channel alpha-1 subunit homolog (CCA1) and putative protein 2 (PUT2) genes, partial cds, complete sequence Length = 63155 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 27621 cacgcacgcacgcgcgcgc 27603
>gb|U62959.1|SSU62959 Sus scrofa clone DG94 repeat region DNA Length = 334 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 169 cacgcacgcacgcgcgcgc 187
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 103392 cacgcacgcacgcgcgcgc 103374
>gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C16, complete sequence Length = 137872 Score = 38.2 bits (19), Expect = 8.9 Identities = 31/35 (88%) Strand = Plus / Minus Query: 89 tctcctcctcctccgccccgccgtcgcggcgctcc 123 ||||||||||||| | |||||| ||||||||||| Sbjct: 100228 tctcctcctcctcgccgccgccgccgcggcgctcc 100194
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 ggtctcctcctcctccgcc 105 ||||||||||||||||||| Sbjct: 92104 ggtctcctcctcctccgcc 92122
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 99852 cacgcacgcacgcgcgcgc 99870
>gb|AC162902.4| Mus musculus BAC clone RP23-448D23 from chromosome 12, complete sequence Length = 190357 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 3568 cacgcacgcacgcgcgcgc 3586
>gb|AC151967.6| Mus musculus BAC clone RP24-235L23 from chromosome 12, complete sequence Length = 184240 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 13851 cacgcacgcacgcgcgcgc 13869
>gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, complete sequence Length = 172490 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 126755 cacgcacgcacgcgcgcgc 126773
>gb|AC124326.11| Mus musculus chromosome 16, clone RP24-463I7, complete sequence Length = 168107 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 85288 cacgcacgcacgcgcgcgc 85270
>gb|AC104917.9| Mus musculus chromosome 1, clone RP23-329F7, complete sequence Length = 205999 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 gctggtctcctcctcctcc 102 ||||||||||||||||||| Sbjct: 102408 gctggtctcctcctcctcc 102390
>gb|AC124127.12| Mus musculus chromosome 19, clone RP23-150N4, complete sequence Length = 194548 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 42063 cacgcacgcacgcgcgcgc 42081
>gb|AC096938.8| Rattus norvegicus 16 BAC CH230-49B24 (Children's Hospital Oakland Research Institute) complete sequence Length = 220401 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 112255 cacgcacgcacgcgcgcgc 112273
>gb|AC102155.10| Mus musculus chromosome 18, clone RP23-334J12, complete sequence Length = 189666 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 80079 cacgcacgcacgcgcgcgc 80097
>gb|AC102229.7| Mus musculus chromosome 15, clone RP24-70F9, complete sequence Length = 202156 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 128229 cacgcacgcacgcgcgcgc 128247
>gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genomic sequence, complete sequence Length = 115815 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 88 gtctcctcctcctccgccc 106 ||||||||||||||||||| Sbjct: 94082 gtctcctcctcctccgccc 94100
>gb|AC091322.8| Mus musculus chromosome 3, clone RP23-60D3, complete sequence Length = 233938 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 163864 cacgcacgcacgcgcgcgc 163846
>gb|AC115022.11| Mus musculus chromosome 7, clone RP24-233J11, complete sequence Length = 150060 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 16412 cacgcacgcacgcgcgcgc 16394
>gb|AC129332.6| Mus musculus BAC clone RP23-91I19 from chromosome 9, complete sequence Length = 219117 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 80443 cacgcacgcacgcgcgcgc 80461
>gb|AC148336.4| Mus musculus BAC clone RP23-21J15 from chromosome 18, complete sequence Length = 238060 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 214446 cacgcacgcacgcgcgcgc 214464
>gb|AC129775.4| Mus musculus BAC clone RP23-174N20 from chromosome 3, complete sequence Length = 225505 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 123009 cacgcacgcacgcgcgcgc 122991
>gb|AC123856.4| Mus musculus BAC clone RP23-341H24 from chromosome 1, complete sequence Length = 226881 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 205589 cacgcacgcacgcgcgcgc 205607
>ref|XM_581024.2| PREDICTED: Bos taurus VAMP (vesicle-associated membrane protein)-associated protein B and C, transcript variant 1 (VAPB), mRNA Length = 2456 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 1959 cacgcacgcacgcgcgcgc 1977
>ref|XM_866452.1| PREDICTED: Bos taurus VAMP (vesicle-associated membrane protein)-associated protein B and C, transcript variant 2 (VAPB), mRNA Length = 2339 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 1842 cacgcacgcacgcgcgcgc 1860
>gb|AC118802.7| Rattus norvegicus 13 BAC CH230-72B9 (Children's Hospital Oakland Research Institute) complete sequence Length = 239935 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 130114 cacgcacgcacgcgcgcgc 130132
>gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1263_E10, complete sequence Length = 116469 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 75649 cacgcacgcacgcgcgcgc 75631
>ref|XM_953695.1| Neurospora crassa OR74A hypothetical protein (NCU05944.1) partial mRNA Length = 1044 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tctcctcctcctccgcccc 107 ||||||||||||||||||| Sbjct: 985 tctcctcctcctccgcccc 967
>ref|XM_325798.1| Neurospora crassa OR74A hypothetical protein (NCU05944.1) partial mRNA Length = 1044 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tctcctcctcctccgcccc 107 ||||||||||||||||||| Sbjct: 985 tctcctcctcctccgcccc 967
>gb|AC118640.8| Mus musculus chromosome 15, clone RP24-112A20, complete sequence Length = 179510 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 51297 cacgcacgcacgcgcgcgc 51279
>gb|AY294418.1| Anas platyrhynchos MHC class I antigen alpha chain (Anpl-U) mRNA, Anpl-U*04 allele, complete cds Length = 1940 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 cgcccggacctccttcctc 161 ||||||||||||||||||| Sbjct: 232 cgcccggacctccttcctc 214
>gb|AC079277.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-65N7, complete sequence Length = 190328 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 gctggtctcctcctcctcc 102 ||||||||||||||||||| Sbjct: 127744 gctggtctcctcctcctcc 127726
>gb|AC107795.17| Mus musculus chromosome 1, clone RP23-433P9, complete sequence Length = 216501 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 33622 cacgcacgcacgcgcgcgc 33640
>gb|AC150412.2| Branchiostoma floridae clone CH302-60C21, complete sequence Length = 169780 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 82315 cacgcacgcacgcgcgcgc 82297
>gb|AC132248.3| Mus musculus BAC clone RP24-425H24 from chromosome 7, complete sequence Length = 195294 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 119947 cacgcacgcacgcgcgcgc 119965
>gb|AC147369.3| Mus musculus BAC clone RP24-392B5 from chromosome 19, complete sequence Length = 184037 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 166467 cacgcacgcacgcgcgcgc 166449
>gb|AC123838.4| Mus musculus BAC clone RP23-385N1 from chromosome 8, complete sequence Length = 219477 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 91967 cacgcacgcacgcgcgcgc 91949
>gb|AC115863.17| Mus musculus chromosome 9, clone RP24-295J1, complete sequence Length = 174095 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 90340 cacgcacgcacgcgcgcgc 90358
>gb|AC158608.10| Mus musculus 10 BAC RP24-405N1 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 181588 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 66080 cacgcacgcacgcgcgcgc 66098
>gb|AC113961.14| Mus musculus chromosome 19, clone RP23-18G1, complete sequence Length = 256791 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 186778 cacgcacgcacgcgcgcgc 186796
>gb|AC164532.4| Mus musculus chromosome 7, clone RP24-64B10, complete sequence Length = 206573 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 39022 cacgcacgcacgcgcgcgc 39004
>gb|AC119880.11| Mus musculus chromosome 7, clone RP24-428H4, complete sequence Length = 187158 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 180322 cacgcacgcacgcgcgcgc 180304
>gb|AC162914.2| Mus musculus BAC clone RP23-401O13 from chromosome 6, complete sequence Length = 194892 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 133124 cacgcacgcacgcgcgcgc 133142
>gb|AC163664.3| Mus musculus BAC clone RP23-310P18 from chromosome 14, complete sequence Length = 221930 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 131901 cacgcacgcacgcgcgcgc 131883
>gb|AC141885.3| Mus musculus BAC clone RP24-104I20 from chromosome 16, complete sequence Length = 167248 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 71659 cacgcacgcacgcgcgcgc 71677
>gb|AY453224.1| Coregonus clupeaformis microsatellite Cocl-Lav224 sequence Length = 481 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 268 cacgcacgcacgcgcgcgc 250
>gb|AY453223.1| Coregonus clupeaformis microsatellite Cocl-Lav221 sequence Length = 477 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 268 cacgcacgcacgcgcgcgc 250
>gb|AC147051.2| Mus musculus BAC clone RP23-90H22 from chromosome 8, complete sequence Length = 224213 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 67421 cacgcacgcacgcgcgcgc 67403
>gb|AC125235.3| Mus musculus BAC clone RP23-23D1 from chromosome 8, complete sequence Length = 191753 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 50187 cacgcacgcacgcgcgcgc 50169
>gb|AC132608.2| Mus musculus BAC clone RP23-451E12 from chromosome 18, complete sequence Length = 201478 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 156900 cacgcacgcacgcgcgcgc 156918
>gb|AC131761.4| Mus musculus BAC clone RP24-228J4 from chromosome 18, complete sequence Length = 167442 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 134643 cacgcacgcacgcgcgcgc 134625
>emb|CT025527.7| Mouse DNA sequence from clone RP23-279J20 on chromosome 16, complete sequence Length = 202976 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 120545 cacgcacgcacgcgcgcgc 120563
>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end Length = 247462 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tctcctcctcctccgcccc 107 ||||||||||||||||||| Sbjct: 94289 tctcctcctcctccgcccc 94271
>emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 in linkage group 11, complete sequence Length = 198600 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 24691 cacgcacgcacgcgcgcgc 24673
>gb|AC139934.9| Mus musculus chromosome 12, clone RP23-39G14, complete sequence Length = 312488 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 73023 cacgcacgcacgcgcgcgc 73041
>emb|CT009637.4| Mouse DNA sequence from clone RP23-131G16 on chromosome 17, complete sequence Length = 222316 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 141732 cacgcacgcacgcgcgcgc 141750
>emb|CR936839.12| Mouse DNA sequence from clone CH29-120A16 on chromosome 1, complete sequence Length = 250586 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 196917 cacgcacgcacgcgcgcgc 196899
>gb|AC107711.13| Mus musculus chromosome 14, clone RP23-291I12, complete sequence Length = 228302 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 128844 cacgcacgcacgcgcgcgc 128862
>gb|AC131700.3| Mus musculus BAC clone RP24-67N3 from chromosome 6, complete sequence Length = 197050 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 38408 cacgcacgcacgcgcgcgc 38426
>gb|AC115361.5| Mus musculus BAC clone RP24-76P12 from chromosome 8, complete sequence Length = 235095 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 123573 cacgcacgcacgcgcgcgc 123555
>gb|AC129308.6| Mus musculus BAC clone RP24-308E2 from chromosome 14, complete sequence Length = 186606 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 76675 cacgcacgcacgcgcgcgc 76693
>gb|AC124393.5| Mus musculus BAC clone RP24-331E1 from chromosome 18, complete sequence Length = 171769 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 161072 cacgcacgcacgcgcgcgc 161090
>gb|AC123049.4| Mus musculus BAC clone RP24-360B3 from chromosome 5, complete sequence Length = 166292 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 127607 cacgcacgcacgcgcgcgc 127589
>gb|AC138768.3| Mus musculus BAC clone RP24-465E14 from chromosome 18, complete sequence Length = 158065 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 71584 cacgcacgcacgcgcgcgc 71566
>gb|AC122414.4| Mus musculus BAC clone RP24-150D8 from chromosome 5, complete sequence Length = 186986 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 134 gctggccggcgcccggacctcct 156 ||||||||| ||||||||||||| Sbjct: 78856 gctggccggagcccggacctcct 78878
>gb|AC126940.4| Mus musculus BAC clone RP23-77E4 from chromosome 19, complete sequence Length = 256476 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 169912 cacgcacgcacgcgcgcgc 169930
>gb|AC133099.3| Mus musculus BAC clone RP23-90K8 from chromosome 19, complete sequence Length = 224638 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 72876 cacgcacgcacgcgcgcgc 72858
>gb|AC122299.5| Mus musculus BAC clone RP23-270L23 from chromosome 5, complete sequence Length = 209091 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 59972 cacgcacgcacgcgcgcgc 59954
>gb|AC118245.17| Mus musculus chromosome 6, clone RP23-292C5, complete sequence Length = 230218 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 6531 cacgcacgcacgcgcgcgc 6513
>gb|AC002519.1|HUAC002519 Human Chromosome 16 BAC clone CIT987SK-A-355G7, complete sequence Length = 139958 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 134642 cacgcacgcacgcgcgcgc 134624
>gb|AC113096.12| Mus musculus chromosome 14, clone RP23-312M23, complete sequence Length = 224556 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 97496 cacgcacgcacgcgcgcgc 97514
>gb|AC091250.2| Mus musculus strain C57BL6/J chromosome 5 clone RP23-315E2, complete sequence Length = 201395 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 130654 cacgcacgcacgcgcgcgc 130636
>gb|AC126256.4| Mus musculus BAC clone RP24-235B15 from chromosome 7, complete sequence Length = 188677 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 142650 cacgcacgcacgcgcgcgc 142668
>gb|AC122794.3| Mus musculus BAC clone RP24-202L5 from chromosome 8, complete sequence Length = 157120 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 94422 cacgcacgcacgcgcgcgc 94404
>gb|AC112793.5| Mus musculus BAC clone RP23-410D16 from chromosome 2, complete sequence Length = 191286 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 100341 cacgcacgcacgcgcgcgc 100323
>gb|AC083890.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-284P20, complete sequence Length = 203967 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 124936 cacgcacgcacgcgcgcgc 124918
>gb|AC122925.3| Mus musculus BAC clone RP23-9O19 from 1, complete sequence Length = 256751 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 33799 cacgcacgcacgcgcgcgc 33817
>emb|CR974448.6| Pig DNA sequence from clone CH242-250F12 on chromosome 17, complete sequence Length = 57884 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 51886 cacgcacgcacgcgcgcgc 51868
>gb|AC116996.3| Mus musculus BAC clone RP23-6B22 from 15, complete sequence Length = 229669 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 203933 cacgcacgcacgcgcgcgc 203951
>gb|AC114916.5| Mus musculus BAC clone RP23-68E10 from 15, complete sequence Length = 207411 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 141443 cacgcacgcacgcgcgcgc 141425
>gb|AC098744.3| Mus musculus BAC clone RP23-122P15 from 8, complete sequence Length = 204779 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 193754 cacgcacgcacgcgcgcgc 193736
>gb|AC121820.2| Mus musculus BAC clone RP23-460N4 from 6, complete sequence Length = 178653 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 134568 cacgcacgcacgcgcgcgc 134586
>gb|AC121857.2| Mus musculus BAC clone RP24-98A9 from 1, complete sequence Length = 171124 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 157755 cacgcacgcacgcgcgcgc 157773
>gb|AC121865.2| Mus musculus BAC clone RP24-112O1 from 8, complete sequence Length = 178620 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 111762 cacgcacgcacgcgcgcgc 111780
>gb|AC111012.3| Mus musculus BAC clone RP24-146N3 from 8, complete sequence Length = 155637 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 88455 cacgcacgcacgcgcgcgc 88437
>gb|AC123039.3| Mus musculus BAC clone RP24-531I15 from 8, complete sequence Length = 147370 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 74393 cacgcacgcacgcgcgcgc 74375
>gb|AC084390.1| Mus musculus BAC clone RP23-285H9 from 1, complete sequence Length = 177050 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 1292 cacgcacgcacgcgcgcgc 1274
>gb|AC112680.12| Mus musculus chromosome 9, clone RP23-203D1, complete sequence Length = 226883 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 54621 cacgcacgcacgcgcgcgc 54639
>gb|AC117639.7| Mus musculus chromosome 10, clone RP23-225H6, complete sequence Length = 217522 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 12950 cacgcacgcacgcgcgcgc 12968
>gb|AC018706.3| Homo sapiens BAC clone RP11-99O17 from 7, complete sequence Length = 101611 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 38919 cacgcacgcacgcgcgcgc 38937
>gb|AC125451.7| Mus musculus chromosome 12, clone RP23-41O6, complete sequence Length = 236838 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 72038 cacgcacgcacgcgcgcgc 72020
>gb|AC115750.9| Mus musculus chromosome 10, clone RP23-16F5, complete sequence Length = 228071 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 222309 cacgcacgcacgcgcgcgc 222327
>gb|AC102077.7| Mus musculus chromosome 7, clone RP23-423B21, complete sequence Length = 229721 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 180209 cacgcacgcacgcgcgcgc 180191
>gb|AC119813.16| Mus musculus chromosome 14, clone RP23-298L20, complete sequence Length = 169207 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 53177 cacgcacgcacgcgcgcgc 53159
>gb|AC163993.3| Mus musculus chromosome 19, clone RP24-78O14, complete sequence Length = 177411 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 162144 cacgcacgcacgcgcgcgc 162126
>gb|AC166254.5| Mus musculus 6 BAC RP24-409O18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 201023 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 56050 cacgcacgcacgcgcgcgc 56068
>gb|AC163283.3| Mus musculus BAC clone RP23-405A16 from chromosome 12, complete sequence Length = 197540 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 184590 cacgcacgcacgcgcgcgc 184608
>gb|AC153656.4| Mus musculus BAC clone RP23-428O19 from chromosome 1, complete sequence Length = 196584 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 107770 cacgcacgcacgcgcgcgc 107752
>gb|AC154836.2| Mus musculus BAC clone RP24-574D17 from chromosome 16, complete sequence Length = 150449 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 41836 cacgcacgcacgcgcgcgc 41854
>emb|CR382283.8| Zebrafish DNA sequence from clone DKEYP-32G11 in linkage group 7, complete sequence Length = 145013 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 6139 cacgcacgcacgcgcgcgc 6157
>emb|AL591479.3| Human DNA sequence from clone RP11-154P18 on chromosome 9 Contains two novel pseudogene, a CDRT15 protein pseudogene, a pseudogene similar to part of meprin A, alpha (PABA peptide hydrolase) (MEP1A) and two CpG islands, complete sequence Length = 178933 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 89463 cacgcacgcacgcgcgcgc 89481
>gb|AC091542.3| Felis catus clone RP86-141L11, complete sequence Length = 142451 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 132015 cacgcacgcacgcgcgcgc 132033
>emb|AL160398.27| Human DNA sequence from clone RP11-15N12 on chromosome 6 Contains the 5' end of the gene for the possible ortholog of R. norvegicus ion transporter protein (NRITP), complete sequence Length = 134995 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 88 gtctcctcctcctccgccccgcc 110 |||||||||||| |||||||||| Sbjct: 110538 gtctcctcctcccccgccccgcc 110516
>emb|AL050331.11|HSDJ486I3 Human DNA sequence from clone RP3-486I3 on chromosome 6q22.1-22.3 Contains the 3' end of a novel gene, a novel gene, the gene for KIAA0721 (NAP (Nucleosome Assembly Protein) domain containing protein), a novel gene, an RPS5 (40S Ribosomal Protein S5) pseudogene, the TSPYL gene for TSPY-like (testis specific protein, Y-linked like), the 5' end of a novel gene, the 5' end of the SART gene for squamous cell carcinoma antigen recognised by T cell and two CpG islands, complete sequence Length = 118327 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 5556 cacgcacgcacgcgcgcgc 5538
>gb|AC157904.3| Mus musculus chromosome 18, clone RP23-379G12, complete sequence Length = 182922 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 94485 cacgcacgcacgcgcgcgc 94467
>gb|AC158310.3| Mus musculus chromosome 5, clone RP23-106N8, complete sequence Length = 218714 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 133677 cacgcacgcacgcgcgcgc 133695
>emb|AL035069.5|HS404P13 Human DNA sequence from clone RP3-404P13 on chromosome 22q13.2-13.13 Contains GSSs, complete sequence Length = 24453 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 acaccacgcacgcacgcgc 19 ||||||||||||||||||| Sbjct: 603 acaccacgcacgcacgcgc 621
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 9947 cacgcacgcacgcgcgcgc 9965
>emb|AL732484.13| Mouse DNA sequence from clone RP23-37B7 on chromosome 2, complete sequence Length = 201265 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 gctggtctcctcctcctcc 102 ||||||||||||||||||| Sbjct: 89514 gctggtctcctcctcctcc 89532
>gb|AC098022.5| Rattus norvegicus 7 BAC CH230-53D11 (Children's Hospital Oakland Research Institute) complete sequence Length = 233080 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 99164 cacgcacgcacgcgcgcgc 99146
>gb|AC111280.7| Rattus norvegicus 13 BAC CH230-51N9 (Children's Hospital Oakland Research Institute) complete sequence Length = 216192 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 16726 cacgcacgcacgcgcgcgc 16744
>gb|AC096310.9| Rattus norvegicus 1 BAC CH230-121B19 (Children's Hospital Oakland Research Institute) complete sequence Length = 218258 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 154615 cacgcacgcacgcgcgcgc 154633
>gb|AC105174.7| Mus musculus chromosome 5, clone RP24-230L5, complete sequence Length = 179947 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 136264 cacgcacgcacgcgcgcgc 136282
>gb|AY436325.1| Homo sapiens angiotensin II receptor, type 1 (AGTR1) gene, complete cds Length = 48000 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 cctcctcctccgccccgcc 110 ||||||||||||||||||| Sbjct: 2614 cctcctcctccgccccgcc 2596
>emb|AL645803.19| Mouse DNA sequence from clone RP23-119N24 on chromosome 11 Contains the 5' end of the Ddc gene for dopa decarboxylase, a novel gene and the 3' end of the Grb10 gene for growth factor receptor bound protein 10, complete sequence Length = 128744 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 85 ctggtctcctcctcctccgcccc 107 |||||||||||||||||| |||| Sbjct: 44449 ctggtctcctcctcctcctcccc 44427
>gb|AC158238.2| Mus musculus BAC clone RP23-106F10 from chromosome 9, complete sequence Length = 242356 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 22051 cacgcacgcacgcgcgcgc 22033
>gb|AC163902.2| Mus musculus BAC clone RP23-479B18 from chromosome 17, complete sequence Length = 190411 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 30691 cacgcacgcacgcgcgcgc 30709
>emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chromosome 4 Contains the 3' end of the Col27a1 gene for procollagen type XXVII alpha 1, the Orm1, Orm2 and Orm3 genes for orosomucoid 1, 2 and 3, an orosomucoid pseudogene, the gene for a novel protein similar to human AT-hook protein AKNA, gene 4933437N03Rik, the Whrn gene for whirlin and two CpG islands, complete sequence Length = 214370 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 115910 cacgcacgcacgcgcgcgc 115892
>emb|AL662805.13| Mouse DNA sequence from clone RP23-311O20 on chromosome 11, complete sequence Length = 174380 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 gctggtctcctcctcctcc 102 ||||||||||||||||||| Sbjct: 42231 gctggtctcctcctcctcc 42213
>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24, complete sequence Length = 127506 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tctcctcctcctccgcccc 107 ||||||||||||||||||| Sbjct: 72035 tctcctcctcctccgcccc 72017
>gb|AC105987.21| Mus musculus chromosome 5, clone RP24-446I1, complete sequence Length = 192043 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 130992 cacgcacgcacgcgcgcgc 130974
>emb|AL591429.9| Mouse DNA sequence from clone RP23-307I20 on chromosome 11 Contains a novel gene, complete sequence Length = 149879 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 103699 cacgcacgcacgcgcgcgc 103681
>emb|BX000359.7| Mouse DNA sequence from clone RP23-343C18 on chromosome 11 Contains the gene for a novel helix-loop-helix DNA-binding domain containing protein, a novel gene, the Gosr1 gene for golgi SNAP receptor complex member 1 and a CpG island, complete sequence Length = 118586 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 45138 cacgcacgcacgcgcgcgc 45120
>emb|AL645702.14| Mouse DNA sequence from clone RP23-163J17 on chromosome 1 Contains a ribosomal protein S2 (Rps2) pseudogene, a tigger transposable element derived 1 (TIGD1) pseudogene and a ribosomal protein L17 (Rpl17) pseudogene, complete sequence Length = 205103 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 45805 cacgcacgcacgcgcgcgc 45823
>emb|AL662892.11| Mouse DNA sequence from clone RP23-408L15 on chromosome 11 Contains part of a novel gene, a novel gene, a SMT3 (supressor of mif two, 3) homolog 1 (S. cerevisiae) (Smt3h1) pseudogene and a ribosomal protein S12 (Rps12) pseudogene, complete sequence Length = 106145 Score = 38.2 bits (19), Expect = 8.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cacgcacgcacgcgcgcgc 23 ||||||||||||||||||| Sbjct: 38383 cacgcacgcacgcgcgcgc 38365 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,226,007 Number of Sequences: 3902068 Number of extensions: 2226007 Number of successful extensions: 547021 Number of sequences better than 10.0: 470 Number of HSP's better than 10.0 without gapping: 492 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 527208 Number of HSP's gapped (non-prelim): 19526 length of query: 182 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 160 effective length of database: 17,147,199,772 effective search space: 2743551963520 effective search space used: 2743551963520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
