>PROQ_YERPE (Q8ZFJ9) ProP effector|
          Length = 237

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 73  QELVGAGVKEPPSQYVLPEQYRPAAAAVSE-MPEPIPIIDLSRLSAGSAEEFDKLRSAL 246
           +E   A     P Q   P+Q RP    V E  P P+P+ D+S+L  G   +    +SA+
Sbjct: 148 REAGAAPENRKPRQSPRPQQVRPPRPQVEENQPRPVPVTDISKLQIGQEIKVRAGKSAM 206

>KIF4A_HUMAN (O95239) Chromosome-associated kinesin KIF4A (Chromokinesin)|
          Length = 1232

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -1

Query: 179 GMGSGISETAAAAGRYCSGSTYWLGGSFTPAPTSSCTIGGTSRIL 45
           G+  G + T  A G+  SG TY +GG++T    +  T+G   R++
Sbjct: 75  GVFKGYNATVLAYGQTGSGKTYSMGGAYTAEQENEPTVGVIPRVI 119

>KIF4A_MOUSE (P33174) Chromosome-associated kinesin KIF4A (Chromokinesin)|
          Length = 1231

 Score = 30.8 bits (68), Expect = 0.97
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -1

Query: 179 GMGSGISETAAAAGRYCSGSTYWLGGSFTPAPTSSCTIGGTSRIL 45
           G+  G + T  A G+  SG TY +GG++T        IG   R++
Sbjct: 75  GVFKGYNATVLAYGQTGSGKTYSMGGAYTAEQEHDSAIGVIPRVI 119

>DLL3_MOUSE (O88516) Delta-like protein 3 precursor (Drosophila Delta homolog|
           3) (M-Delta-3)
          Length = 592

 Score = 30.8 bits (68), Expect = 0.97
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 123 SRAIPSRCGGGLRDARAHPHHRPQPALC 206
           SR+ PSRCG GLR     P     P++C
Sbjct: 191 SRSAPSRCGPGLRPCTPFPDECEAPSVC 218

>APLP1_HUMAN (P51693) Amyloid-like protein 1 precursor (APLP) (APLP-1)|
           [Contains: C30]
          Length = 650

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +3

Query: 117 RASRAIPSR--CGGGLRDARAHPHHRPQPALC 206
           +A++AIP    CGG    + AHPHH+  P  C
Sbjct: 109 QATQAIPMERWCGGSRSGSCAHPHHQVVPFRC 140

>KIF4A_CHICK (Q90640) Chromosome-associated kinesin KIF4A (Chromokinesin)|
          Length = 1225

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -1

Query: 179 GMGSGISETAAAAGRYCSGSTYWLGGSFTPAPTSSCTIGGTSRIL 45
           G+  G + T  A G+  SG TY +GG++T +     ++G   R++
Sbjct: 75  GIFKGYNATVLAYGQTGSGKTYSMGGTYTASQEHDPSMGVIPRVI 119

>KIF4A_XENLA (Q91784) Chromosome-associated kinesin KLP1 (Chromokinesin)|
          Length = 1226

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 179 GMGSGISETAAAAGRYCSGSTYWLGGSFTPAPTSSCTIG 63
           G+  G + T  A G+  SG TY +GG++T    +  T+G
Sbjct: 74  GLFKGYNATVLAYGQTGSGKTYSMGGAYTHNQENEPTVG 112

>MISS_MOUSE (Q9D7G9) MAPK-interacting and spindle-stabilizing protein|
           (Mitogen-activated protein kinase 1-interacting protein
           1)
          Length = 263

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 61  PPIVQELVGAGVKEPPSQYVLPEQYRPAAAAVSEMPEPIPI 183
           PP+    V  G  EPP+QY  PE   P+         P P+
Sbjct: 111 PPVAWVTVPPGAWEPPAQYPTPEASYPSPGLQPSPNNPYPL 151

>ZN281_HUMAN (Q9Y2X9) Zinc finger protein 281 (Zinc finger DNA-binding protein|
           99) (Transcription factor ZBP-99) (GC-box-binding zinc
           finger protein 1)
          Length = 895

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 20/62 (32%), Positives = 26/62 (41%)
 Frame = +1

Query: 58  VPPIVQELVGAGVKEPPSQYVLPEQYRPAAAAVSEMPEPIPIIDLSRLSAGSAEEFDKLR 237
           +PP+      AG   PP Q VL      AA A    P P P +   +  A SA  F   R
Sbjct: 57  LPPVTSFTRPAGSAAPPPQCVLSSS-TSAAPAAEPPPPPAPDMTFKKEPAASAAAFPSQR 115

Query: 238 SA 243
           ++
Sbjct: 116 TS 117

>CFC1_MOUSE (P97766) Cryptic protein precursor|
          Length = 202

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = -1

Query: 239 DRSLSNSSA---LPAESRLRSMMGMGSGISETAAAAGRYCSGSTYWLGGSFTPAP 84
           DR+LSNSS    +P  +RL   +   S + E+A    R C      + GSF   P
Sbjct: 60  DRTLSNSSRKNDIPEGARLWDSLPDSSTLGESAVPVSRCCHNGGTCVLGSFCVCP 114

>FLS_SOLTU (Q41452) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)|
           (EC 1.14.11.9) (FLS)
          Length = 349

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +1

Query: 106 PSQYVLPEQYRPAAAAVSEMPEPIPIIDLSRL 201
           PS+Y+  E  +PAA  +  +   +P+ID+S +
Sbjct: 34  PSEYIRSENEQPAATTLQGVVLEVPVIDISNV 65

>TBC17_MOUSE (Q8BYH7) TBC1 domain family member 17|
          Length = 645

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +1

Query: 25  ASYDQQFKILEVPPIVQELVGAGVKEPPSQYVLPEQYRPAAAAVSEMPEPIP 180
           A Y Q     E+P  VQE++G    E PS    P    P +   + +P P+P
Sbjct: 573 ALYRQLTACPELPHNVQEILGLAQPEEPSSPSPPVFPMPLSPTRAPLPPPLP 624

>TXD11_HUMAN (Q6PKC3) Thioredoxin domain-containing protein 11 (EF-hand-binding|
           protein 1)
          Length = 985

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = +1

Query: 19  TMASYDQQFKILEVPPIVQELVGAGVKEPPSQYVLPE 129
           T+ S+ Q F +L   P+ + L+G+G  + PSQ+++ E
Sbjct: 659 TLESFIQNFSVL-YSPLKRHLIGSGSAQFPSQHLITE 694

>APLP1_MOUSE (Q03157) Amyloid-like protein 1 precursor (APLP) (APLP-1)|
           [Contains: C30]
          Length = 653

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +3

Query: 117 RASRAIPSR--CGGGLRDARAHPHHRPQPALC 206
           +A++AIP    CGG      AHPHH   P  C
Sbjct: 108 QAAQAIPMERWCGGTRSGRCAHPHHEVVPFHC 139

>PO2F1_CHICK (P15143) POU domain, class 2, transcription factor 1|
           (Octamer-binding transcription factor 1) (Oct-1) (OTF-1)
           (NF-A1)
          Length = 739

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
 Frame = -1

Query: 242 ADRSLSNSSALPAESRLRSMM---GMGSGI--SETAAAAGRYCSGSTYWLGGSFTPAPTS 78
           A  +L  ++ LPA + L +M    G+  G+  S   AA G   S +   LGG+ +PA  S
Sbjct: 569 AAAALQGAAQLPANASLAAMAAAAGLNPGLMASSQFAAGGALLSLNPGTLGGALSPALMS 628

Query: 77  SCTI 66
           + T+
Sbjct: 629 NSTL 632

>G2OX8_ARATH (O49561) Gibberellin 2-beta-dioxygenase 8 (EC 1.14.11.13)|
           (Gibberellin 2-beta-hydroxylase 8) (Gibberellin
           2-oxidase 8) (GA 2-oxidase 8)
          Length = 293

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +1

Query: 142 AAAAVSEMPEPIPIIDLSRLSAGSAEEFDKLRSAL 246
           +  AV E  E +P+ID+SRL  G+ EE +K + A+
Sbjct: 32  SVTAVVEEVE-LPVIDVSRLIDGAEEEREKCKEAI 65

>TOS1_YEAST (P38288) Protein TOS1 precursor (Target of SBF 1)|
          Length = 455

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
 Frame = -1

Query: 230 LSNSSALPAESRLRSMMGMGSGISETAAAAGRYCSGSTY---WLGGS-FTPAPTSSCTI- 66
           LS+S+     S  +S +      S  AAA+    S S     W  GS F P  TS+CT  
Sbjct: 181 LSSSAQAVETSESQSSISSSKTTSSAAAASSSSSSSSNTNGDWSRGSYFVPGSTSNCTFM 240

Query: 65  ---GGTS 54
              GGT+
Sbjct: 241 NNQGGTA 247

>INCE_HUMAN (Q9NQS7) Inner centromere protein|
          Length = 923

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = +1

Query: 28  SYDQQFKILEVPPIVQELVGAGVKEPPSQYVLPEQYRPAAAAVSEMPE 171
           SY ++   +EVP    + VG+  KEPP      E+  P AAA  E+PE
Sbjct: 357 SYLERLLNVEVP----QKVGSEQKEPP------EEAEPVAAAEPEVPE 394

>HLYD_PASHA (P16534) Leukotoxin secretion protein D|
          Length = 478

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 127 EQYRPAAAAVSEMPEPIPIIDLSRLSAGSAEEFDKLR 237
           E YR      +   E +P+IDLSR     + E D+LR
Sbjct: 149 ENYRYQTLLTAIEKESLPVIDLSRTEFKDSSEEDRLR 185

>ZN250_MOUSE (Q7TNU6) Zinc finger protein 250 (Zinc finger protein 647)|
          Length = 535

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +1

Query: 25  ASYDQQFKILEVPPIVQELVGAGVKEPPSQYVLPEQYRPAAAAVSEMPEPI 177
           A  + Q   L VPP++ +   A + E P + V  E+Y+     V   P+PI
Sbjct: 98  AKEENQNTDLNVPPLISDEASATLTETPLRKVAEERYK-TEPKVCPSPKPI 147


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,393,604
Number of Sequences: 219361
Number of extensions: 598346
Number of successful extensions: 2842
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2840
length of database: 80,573,946
effective HSP length: 58
effective length of database: 67,851,008
effective search space used: 1628424192
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)