| Clone Name | baet73h12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 gcgtgaagcagcagcagcagg 196 ||||||||||||||||||||| Sbjct: 196469 gcgtgaagcagcagcagcagg 196489
>emb|CR726152.2|CNS0GN8U Tetraodon nigroviridis full-length cDNA Length = 1333 Score = 42.1 bits (21), Expect = 0.81 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 agcagcagcagcaggggggcaccaa 206 |||||||||||||||| |||||||| Sbjct: 166 agcagcagcagcagggaggcaccaa 142
>emb|CR669728.2|CNS0FFQE Tetraodon nigroviridis full-length cDNA Length = 1130 Score = 42.1 bits (21), Expect = 0.81 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 agcagcagcagcaggggggcaccaa 206 |||||||||||||||||||| |||| Sbjct: 497 agcagcagcagcaggggggcgccaa 473
>gb|AY688304.2| Symbiont bacterium of Theonella swinhoei clone 1e4 onnamide biosynthesis genes, partial sequence Length = 36513 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tcccggatgctttccaagga 233 |||||||||||||||||||| Sbjct: 8353 tcccggatgctttccaagga 8372
>gb|AC165230.12| Mus musculus chromosome 1, clone RP23-65C14, complete sequence Length = 174156 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gaagcagcagcagcaggggg 199 |||||||||||||||||||| Sbjct: 46463 gaagcagcagcagcaggggg 46482
>ref|XM_482417.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1797 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 1731 ccaagctctactcccggatg 1750
>ref|XM_475660.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 684 Score = 40.1 bits (20), Expect = 3.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 204 caagctctactcccggatgctttccaaggaggcggc 239 |||||||||||| ||||| | |||||||||||||| Sbjct: 48 caagctctactcgaggatgatgtccaaggaggcggc 83
>ref|NM_194596.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0092N12.7), mRNA Length = 2391 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 1905 ccaagctctactcccggatg 1924
>ref|NM_194544.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0015O22.10), mRNA Length = 1995 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 1905 ccaagctctactcccggatg 1924
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 aaggaggacgggccggacaa 173 |||||||||||||||||||| Sbjct: 612900 aaggaggacgggccggacaa 612881
>gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0092N12, complete sequence Length = 109198 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 57165 ccaagctctactcccggatg 57184
>gb|AC138341.9| Mus musculus chromosome 5, clone RP23-37N15, complete sequence Length = 176410 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gaagcagcagcagcaggggg 199 |||||||||||||||||||| Sbjct: 21434 gaagcagcagcagcaggggg 21415
>ref|XM_363966.1| Magnaporthe grisea 70-15 hypothetical protein (MG01893.4) partial mRNA Length = 750 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gcaaggaggacgggccggacaagc 175 |||||||||||||| ||||||||| Sbjct: 587 gcaaggaggacgggtcggacaagc 610
>gb|AC134341.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0027N19, complete sequence Length = 141368 Score = 40.1 bits (20), Expect = 3.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 204 caagctctactcccggatgctttccaaggaggcggc 239 |||||||||||| ||||| | |||||||||||||| Sbjct: 119492 caagctctactcgaggatgatgtccaaggaggcggc 119457
>ref|NM_138331.1| Homo sapiens ribonuclease, RNase A family, 8 (RNASE8), mRNA Length = 465 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gaagcagcagcagcaggggg 199 |||||||||||||||||||| Sbjct: 46 gaagcagcagcagcaggggg 27
>gb|AC114990.8| Mus musculus chromosome 16, clone RP24-361F11, complete sequence Length = 179887 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gcagcagcagcaggggggca 202 |||||||||||||||||||| Sbjct: 30085 gcagcagcagcaggggggca 30104
>gb|AC142098.2| Mus musculus BAC clone RP24-458F14 from chromosome 19, complete sequence Length = 193811 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 cggccatggcgagcaccacccgca 154 |||||||| ||||||||||||||| Sbjct: 88647 cggccatgccgagcaccacccgca 88670
>gb|AC130214.4| Mus musculus BAC clone RP23-245B21 from chromosome 16, complete sequence Length = 216170 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gcagcagcagcaggggggca 202 |||||||||||||||||||| Sbjct: 186569 gcagcagcagcaggggggca 186588
>gb|AC121892.3| Mus musculus BAC clone RP24-155I11 from chromosome 1, complete sequence Length = 152888 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gaagcagcagcagcaggggg 199 |||||||||||||||||||| Sbjct: 141563 gaagcagcagcagcaggggg 141582
>gb|AC006604.2| Caenorhabditis elegans cosmid C07F11, complete sequence Length = 41061 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gaagcagcagcagcaggggg 199 |||||||||||||||||||| Sbjct: 25918 gaagcagcagcagcaggggg 25937
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 945389 ccaagctctactcccggatg 945370 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 576320 ccaagctctactcccggatg 576339
>emb|BX842606.1|OSJN00297 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1292H11, complete sequence Length = 152632 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 35569 ccaagctctactcccggatg 35550
>gb|AF534184.1| Haemaphysalis longicornis tropomyosin mRNA, complete cds Length = 1042 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 agcagcagcagcaggggggc 201 |||||||||||||||||||| Sbjct: 915 agcagcagcagcaggggggc 934
>gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0015O22 From Chromosome 10, complete sequence Length = 189349 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 43928 ccaagctctactcccggatg 43947
>gb|AF473856.1| Gorilla gorilla RNase 8 pseudogene, complete sequence Length = 442 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gaagcagcagcagcaggggg 199 |||||||||||||||||||| Sbjct: 46 gaagcagcagcagcaggggg 27
>gb|AF473854.1| Homo sapiens RNase 8 gene, complete cds Length = 465 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gaagcagcagcagcaggggg 199 |||||||||||||||||||| Sbjct: 46 gaagcagcagcagcaggggg 27
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 1376545 ccaagctctactcccggatg 1376526
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 945389 ccaagctctactcccggatg 945370 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 576320 ccaagctctactcccggatg 576339
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gaagcagcagcagcaggggg 199 |||||||||||||||||||| Sbjct: 10298885 gaagcagcagcagcaggggg 10298904
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 19957955 ccaagctctactcccggatg 19957974
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 3.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 204 caagctctactcccggatgctttccaaggaggcggc 239 |||||||||||| ||||| | |||||||||||||| Sbjct: 3798562 caagctctactcgaggatgatgtccaaggaggcggc 3798527 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gaagcagctagctagccaga 108 |||||||||||||||||||| Sbjct: 713862 gaagcagctagctagccaga 713843
>emb|AL662940.3|OSJN00142 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0035A12, complete sequence Length = 130499 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 79338 ccaagctctactcccggatg 79319
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0433E10 Length = 144643 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 126133 ccaagctctactcccggatg 126152
>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1104_G11 Length = 140093 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gaagcagcagcagcaggggg 199 |||||||||||||||||||| Sbjct: 6590 gaagcagcagcagcaggggg 6609
>dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0477F03 Length = 176120 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 29806 ccaagctctactcccggatg 29825
>dbj|AK109061.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-F04, full insert sequence Length = 1088 Score = 40.1 bits (20), Expect = 3.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 204 caagctctactcccggatgctttccaaggaggcggc 239 |||||||||||| ||||| | |||||||||||||| Sbjct: 301 caagctctactcgaggatgatgtccaaggaggcggc 336
>emb|Z78015.1|CER02D5 Caenorhabditis elegans Cosmid R02D5, complete sequence Length = 41076 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gtgaagcagcagcagcaggg 197 |||||||||||||||||||| Sbjct: 26156 gtgaagcagcagcagcaggg 26175
>emb|AL161668.6|CNS01RHB Human chromosome 14 DNA sequence BAC R-998D10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203363 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gaagcagcagcagcaggggg 199 |||||||||||||||||||| Sbjct: 111274 gaagcagcagcagcaggggg 111255
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 945386 ccaagctctactcccggatg 945367 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccaagctctactcccggatg 222 |||||||||||||||||||| Sbjct: 576317 ccaagctctactcccggatg 576336
>emb|AL157687.6|CNS01RFZ Human chromosome 14 DNA sequence BAC C-2552B11 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 197346 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gaagcagcagcagcaggggg 199 |||||||||||||||||||| Sbjct: 48094 gaagcagcagcagcaggggg 48075
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gaagcagctagctagccaga 108 |||||||||||||||||||| Sbjct: 59061 gaagcagctagctagccaga 59042 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,147,053 Number of Sequences: 3902068 Number of extensions: 2147053 Number of successful extensions: 200361 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 199706 Number of HSP's gapped (non-prelim): 655 length of query: 247 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 225 effective length of database: 17,147,199,772 effective search space: 3858119948700 effective search space used: 3858119948700 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)