>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBb0008H02, complete sequence
          Length = 143438

 Score =  103 bits (52), Expect = 3e-19
 Identities = 73/80 (91%)
 Strand = Plus / Plus

                                                                        
Query: 173  ctggtgtcgccggtggaggcgacgccaataggggagcagtactacctgtccaacctggac 232
            |||||| |||||| |||||||||||| |  |||||| |||||||||||||||||||||||
Sbjct: 2723 ctggtggcgccggcggaggcgacgccgacgggggagaagtactacctgtccaacctggac 2782

                                
Query: 233  cagaacatcgcggtgatcgt 252
            ||||||||||| ||||||||
Sbjct: 2783 cagaacatcgccgtgatcgt 2802

>gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0028G07, complete sequence
          Length = 157463

 Score =  103 bits (52), Expect = 3e-19
 Identities = 73/80 (91%)
 Strand = Plus / Plus

                                                                         
Query: 173   ctggtgtcgccggtggaggcgacgccaataggggagcagtactacctgtccaacctggac 232
             |||||| |||||| |||||||||||| |  |||||| |||||||||||||||||||||||
Sbjct: 89040 ctggtggcgccggcggaggcgacgccgacgggggagaagtactacctgtccaacctggac 89099

                                 
Query: 233   cagaacatcgcggtgatcgt 252
             ||||||||||| ||||||||
Sbjct: 89100 cagaacatcgccgtgatcgt 89119

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  103 bits (52), Expect = 3e-19
 Identities = 73/80 (91%)
 Strand = Plus / Plus

                                                                            
Query: 173      ctggtgtcgccggtggaggcgacgccaataggggagcagtactacctgtccaacctggac 232
                |||||| |||||| |||||||||||| |  |||||| |||||||||||||||||||||||
Sbjct: 17495026 ctggtggcgccggcggaggcgacgccgacgggggagaagtactacctgtccaacctggac 17495085

                                    
Query: 233      cagaacatcgcggtgatcgt 252
                ||||||||||| ||||||||
Sbjct: 17495086 cagaacatcgccgtgatcgt 17495105

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  103 bits (52), Expect = 3e-19
 Identities = 73/80 (91%)
 Strand = Plus / Plus

                                                                            
Query: 173      ctggtgtcgccggtggaggcgacgccaataggggagcagtactacctgtccaacctggac 232
                |||||| |||||| |||||||||||| |  |||||| |||||||||||||||||||||||
Sbjct: 17588736 ctggtggcgccggcggaggcgacgccgacgggggagaagtactacctgtccaacctggac 17588795

                                    
Query: 233      cagaacatcgcggtgatcgt 252
                ||||||||||| ||||||||
Sbjct: 17588796 cagaacatcgccgtgatcgt 17588815

>ref|XM_463664.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1329

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 212 tactacctgtccaacctggaccagaacatcgcggtgatcgt 252
           |||||||| |||||||| |||||||||||||| || |||||
Sbjct: 115 tactacctctccaacctcgaccagaacatcgccgtcatcgt 155

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 212      tactacctgtccaacctggaccagaacatcgcggtgatcgt 252
                |||||||| |||||||| |||||||||||||| || |||||
Sbjct: 40501532 tactacctctccaacctcgaccagaacatcgccgtcatcgt 40501572



 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 181      gccggtggaggcgacgccaatagggg 206
                |||||||||||||||| |||||||||
Sbjct: 10672604 gccggtggaggcgacggcaatagggg 10672629

>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1033B05
          Length = 138882

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 212   tactacctgtccaacctggaccagaacatcgcggtgatcgt 252
             |||||||| |||||||| |||||||||||||| || |||||
Sbjct: 63156 tactacctctccaacctcgaccagaacatcgccgtcatcgt 63196

>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0050N08, complete sequence
          Length = 144593

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 212   tactacctgtccaacctggaccagaacatcgc 243
             |||||||| |||||||| ||||||||||||||
Sbjct: 87921 tactacctctccaacctcgaccagaacatcgc 87952

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 212      tactacctgtccaacctggaccagaacatcgc 243
                |||||||| |||||||| ||||||||||||||
Sbjct: 12989005 tactacctctccaacctcgaccagaacatcgc 12989036

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 212      tactacctgtccaacctggaccagaacatcgc 243
                |||||||| |||||||| ||||||||||||||
Sbjct: 12996345 tactacctctccaacctcgaccagaacatcgc 12996376

>gb|AC113955.20| Mus musculus chromosome 7, clone RP23-402K24, complete sequence
          Length = 196206

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 43     caccaatctctctgccatccata 65
              |||||||||||||||||||||||
Sbjct: 153587 caccaatctctctgccatccata 153565

>ref|NM_183628.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1497

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 181 gccggtggaggcgacgccaatagggg 206
           |||||||||||||||| |||||||||
Sbjct: 105 gccggtggaggcgacggcaatagggg 130

>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0706B05
          Length = 187835

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 181    gccggtggaggcgacgccaatagggg 206
              |||||||||||||||| |||||||||
Sbjct: 167227 gccggtggaggcgacggcaatagggg 167252

>emb|CR846080.8| Zebrafish DNA sequence from clone DKEY-29P9 in linkage group 3, complete
              sequence
          Length = 242078

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 68     ctcaaagagaccatcaaaatg 88
              |||||||||||||||||||||
Sbjct: 103228 ctcaaagagaccatcaaaatg 103208

>gb|AC111064.11| Mus musculus chromosome 1, clone RP23-245H20, complete sequence
          Length = 150336

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    tattctttctctctttaaacccac 45
             ||||||||||| ||||||||||||
Sbjct: 71617 tattctttctcactttaaacccac 71594

>gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 216676

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     tcctctgtattctttctctc 34
              ||||||||||||||||||||
Sbjct: 148262 tcctctgtattctttctctc 148243

>gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5 of 13 of the complete
              sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     tcaaagagaccatcaaaatg 88
              ||||||||||||||||||||
Sbjct: 172650 tcaaagagaccatcaaaatg 172669

>emb|AL109940.18|HSJ421D16 Human DNA sequence from clone RP3-421D16 on chromosome 6q26-27 Contains
             part of the gene for smooth muscle cell associated protein
             2 (SMAP2) or secreted modular calcium binding protein 2
             (SMOC2) and two CpG islands, complete sequence
          Length = 110603

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   gcagaatggcgtggccacca 122
             ||||||||||||||||||||
Sbjct: 86451 gcagaatggcgtggccacca 86432

>emb|X15540.1|TBPGIG T.brucei pgi gene for glucose-6-phosphate isomerase (EC 5.3.1.9)
          Length = 2070

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  gtattctttctctctttaaa 40
           ||||||||||||||||||||
Sbjct: 169 gtattctttctctctttaaa 150

>gb|AC158555.6| Mus musculus chromosome 3, clone RP23-14B10, complete sequence
          Length = 208510

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 17     ctctgtattctttctctctttaaa 40
              |||| |||||||||||||||||||
Sbjct: 118720 ctctatattctttctctctttaaa 118697

>gb|AC025173.5|AC025173 Homo sapiens chromosome 5 clone CTD-2036C20, complete sequence
          Length = 140935

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    acttcctctgtattctttct 31
             ||||||||||||||||||||
Sbjct: 83265 acttcctctgtattctttct 83246

>gb|AC000107.2|AC000107 Genomic sequence for Arabidopsis thaliana BAC F17F8 from chromosome I,
             complete sequence
          Length = 102393

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    tctctgccatccatactctc 70
             ||||||||||||||||||||
Sbjct: 14929 tctctgccatccatactctc 14948

>emb|BX649357.5| Mouse DNA sequence from clone RP23-364J19 on chromosome 2, complete
             sequence
          Length = 41488

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    ccacttcctctgtattcttt 29
             ||||||||||||||||||||
Sbjct: 26380 ccacttcctctgtattcttt 26361

>emb|CR854964.10| Zebrafish DNA sequence from clone DKEY-58J19 in linkage group 1, complete
              sequence
          Length = 180969

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    taaggcgcagctgatgtcgg 152
              ||||||||||||||||||||
Sbjct: 172749 taaggcgcagctgatgtcgg 172768

>gb|AC159709.8| Mus musculus 10 BAC RP23-136O17 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 202716

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    tcctctgtattctttctctc 34
             ||||||||||||||||||||
Sbjct: 56792 tcctctgtattctttctctc 56773


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,222,838
Number of Sequences: 3902068
Number of extensions: 2222838
Number of successful extensions: 59880
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59757
Number of HSP's gapped (non-prelim): 123
length of query: 252
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 230
effective length of database: 17,147,199,772
effective search space: 3943855947560
effective search space used: 3943855947560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)