>SYS_MANSM (Q65SK3) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 430

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +3

Query: 198 EEAFKALQVAIKCRNSAGEYESKAVGALDGTGAFSVPLAADL 323
           EE  KALQV  +   +     SKAVGA    G    PL A++
Sbjct: 35  EEQRKALQVETETLQAKRNARSKAVGAAKARGENIAPLLAEM 76

>XBP1_HUMAN (P17861) X box-binding protein 1 (XBP-1) (Tax-responsive|
           element-binding protein 5)
          Length = 261

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 5/31 (16%)
 Frame = -3

Query: 349 SCATQSAP-----WRSAARGTLKAPVPSRAP 272
           SC++ + P     WRS+ R T K PVP + P
Sbjct: 214 SCSSNALPQSLPAWRSSQRSTQKDPVPYQPP 244

>DAPB_PROMA (Q7VC38) Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR)|
          Length = 276

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
 Frame = +3

Query: 201 EAFKALQVAIKCR-----NSAGEYESKAVGALDGTGAFSVPLAADLHGADCVA 344
           E  KA+  +  C      ++A E E   +G   G     V + ADL G+ CVA
Sbjct: 18  EVIKAIYKSNDCELVAAIDNANEMEGVDIGTALGMDQMDVAVTADLEGSLCVA 70

>PHR_ECOLI (P00914) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA|
           photolyase) (Photoreactivating enzyme)
          Length = 472

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +3

Query: 198 EEAFKALQVAIKCRNSAGEYE-SKAVGALDGTGAFSVPLA 314
           EE     Q+   C+N AGEYE  +   A++GT   S  LA
Sbjct: 204 EEKAAIAQLRQFCQNGAGEYEQQRDFPAVEGTSRLSASLA 243


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.125    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,954,872
Number of Sequences: 219361
Number of extensions: 438996
Number of successful extensions: 1754
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1754
length of database: 80,573,946
effective HSP length: 92
effective length of database: 60,392,734
effective search space used: 1449425616
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)