| Clone Name | baet73b07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ234427.1|HVU234427 Hordeum vulgare partial mRNA; clone cMWG0701.uni Length = 312 Score = 567 bits (286), Expect = e-159 Identities = 302/306 (98%), Gaps = 1/306 (0%) Strand = Plus / Plus Query: 14 tcagtcgcagcagcagccgcacatcagcagcttgctctgttccatccggcagcaagcaat 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 tcagtcgcagcagcagccgcacatcagcagcttgctctgttccatccggcagcaagcaat 61 Query: 74 ggcggccacgaccatggcgctctcctcccccgcgatgaagctcgccggagcctcgtacgt 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ggcggccacgaccatggcgctctcctcccccgcgatgaagctcgccggagcctcgtacgt 121 Query: 134 cctcggcggcggccgcatcaccatgcgcatgaccgcggccaaggctgccacctccagcag 193 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122 cctcggcggcggccgcatcaccatgcgcaagaccgcggccaaggctgccacctccagcag 181 Query: 194 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccgag 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccgag 241 Query: 254 ctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctga 313 |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct: 242 ctacctcagcggcgagtt-ccgggcgattacggctgggacaccgcaggggtctctgctga 300 Query: 314 cccgga 319 |||||| Sbjct: 301 cccgga 306
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 190 bits (96), Expect = 2e-45 Identities = 120/128 (93%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 10793123 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 10793182 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| || Sbjct: 10793183 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 10793242 Query: 312 gacccgga 319 |||||||| Sbjct: 10793243 gacccgga 10793250 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 10792997 accatggcgctctcctcccc 10793016
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 190 bits (96), Expect = 2e-45 Identities = 120/128 (93%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 16846 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 16905 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| || Sbjct: 16906 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 16965 Query: 312 gacccgga 319 |||||||| Sbjct: 16966 gacccgga 16973 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 16720 accatggcgctctcctcccc 16739
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 190 bits (96), Expect = 2e-45 Identities = 120/128 (93%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 129741 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 129800 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| || Sbjct: 129801 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 129860 Query: 312 gacccgga 319 |||||||| Sbjct: 129861 gacccgga 129868 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 129615 accatggcgctctcctcccc 129634
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 190 bits (96), Expect = 2e-45 Identities = 120/128 (93%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 191 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 250 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| || Sbjct: 251 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 310 Query: 312 gacccgga 319 |||||||| Sbjct: 311 gacccgga 318 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 65 accatggcgctctcctcccc 84
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 190 bits (96), Expect = 2e-45 Identities = 120/128 (93%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 255 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| || Sbjct: 256 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 315 Query: 312 gacccgga 319 |||||||| Sbjct: 316 gacccgga 323 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 70 accatggcgctctcctcccc 89
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 190 bits (96), Expect = 2e-45 Identities = 120/128 (93%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 198 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 257 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| || Sbjct: 258 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 317 Query: 312 gacccgga 319 |||||||| Sbjct: 318 gacccgga 325 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 72 accatggcgctctcctcccc 91
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 190 bits (96), Expect = 2e-45 Identities = 120/128 (93%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 255 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| || Sbjct: 256 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 315 Query: 312 gacccgga 319 |||||||| Sbjct: 316 gacccgga 323 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 70 accatggcgctctcctcccc 89
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 190 bits (96), Expect = 2e-45 Identities = 120/128 (93%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 255 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| || Sbjct: 256 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 315 Query: 312 gacccgga 319 |||||||| Sbjct: 316 gacccgga 323 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 70 accatggcgctctcctcccc 89
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 190 bits (96), Expect = 2e-45 Identities = 120/128 (93%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 177 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 236 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| || Sbjct: 237 agctacctcaccggcgagttcccgggcgactacgggtgggacaccgcggggctctccgcc 296 Query: 312 gacccgga 319 |||||||| Sbjct: 297 gacccgga 304 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 51 accatggcgctctcctcccc 70
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 182 bits (92), Expect = 5e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 127 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 186 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| | |||||||||||| ||||| ||||| |||||||||||||||||||| || Sbjct: 187 agctacctgaccggcgagttccccggcgactacgggtgggacaccgcggggctctccgcc 246 Query: 312 gacccgga 319 |||||||| Sbjct: 247 gacccgga 254
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 182 bits (92), Expect = 5e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 23603670 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 23603729 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| | |||||||||||| ||||| ||||| |||||||||||||||||||| || Sbjct: 23603730 agctacctgaccggcgagttccccggcgactacgggtgggacaccgcggggctctccgcc 23603789 Query: 312 gacccgga 319 |||||||| Sbjct: 23603790 gacccgga 23603797 Score = 167 bits (84), Expect = 3e-38 Identities = 117/128 (91%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 30024476 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 30024535 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| |||||||||||| ||||| ||||||||||||||||| ||||| || || Sbjct: 30024536 tcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctgtcggcc 30024595 Query: 312 gacccgga 319 |||||||| Sbjct: 30024596 gacccgga 30024603 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 194 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 |||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 37443416 cccgtggtacggccccgaccgcgtcatctacctccgcccgctctccgg 37443369
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 182 bits (92), Expect = 5e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 66369 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 66428 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| | |||||||||||| ||||| ||||| |||||||||||||||||||| || Sbjct: 66429 agctacctgaccggcgagttccccggcgactacgggtgggacaccgcggggctctccgcc 66488 Query: 312 gacccgga 319 |||||||| Sbjct: 66489 gacccgga 66496
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 182 bits (92), Expect = 5e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 198 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 257 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| | |||||||||||| ||||| ||||| |||||||||||||||||||| || Sbjct: 258 agctacctgaccggcgagttccccggcgactacgggtgggacaccgcggggctctccgcc 317 Query: 312 gacccgga 319 |||||||| Sbjct: 318 gacccgga 325
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 182 bits (92), Expect = 5e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 197 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 256 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| | |||||||||||| ||||| ||||| |||||||||||||||||||| || Sbjct: 257 agctacctgaccggcgagttccccggcgactacgggtgggacaccgcggggctctccgcc 316 Query: 312 gacccgga 319 |||||||| Sbjct: 317 gacccgga 324
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 180 bits (91), Expect = 2e-42 Identities = 124/135 (91%) Strand = Plus / Plus Query: 185 ctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcga 244 |||| ||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 144 ctccggcagcccgtggtacggccccgaccgcgtgctctacctgggcccactgtccggcga 203 Query: 245 gcccccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggct 304 ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 204 gcccccgagctacctgacgggcgagttcccgggcgactacggctgggacaccgcggggct 263 Query: 305 ctctgctgacccgga 319 || || |||||||| Sbjct: 264 gtcggcggacccgga 278
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 172 bits (87), Expect = 4e-40 Identities = 108/115 (93%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccc 249 |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 203 gcagcccgtggtacgggtccgaccgcgtgctctacctcggcccgctctccggcgaccccc 262 Query: 250 cgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggct 304 |||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 263 cgagctacctcaccggcgagttccccggcgactacgggtgggacaccgcggggct 317 Score = 48.1 bits (24), Expect = 0.017 Identities = 27/28 (96%) Strand = Plus / Plus Query: 151 tcaccatgcgcatgaccgcggccaaggc 178 |||||||||||| ||||||||||||||| Sbjct: 158 tcaccatgcgcaagaccgcggccaaggc 185
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 167 bits (84), Expect = 3e-38 Identities = 117/128 (91%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 139 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 198 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| |||||||||||| ||||| ||||||||||||||||| ||||| || || Sbjct: 199 tcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctgtcggcc 258 Query: 312 gacccgga 319 |||||||| Sbjct: 259 gacccgga 266
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 167 bits (84), Expect = 3e-38 Identities = 117/128 (91%) Strand = Plus / Minus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 14535 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 14476 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| |||||||||||| ||||| ||||||||||||||||| ||||| || || Sbjct: 14475 tcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctgtcggcc 14416 Query: 312 gacccgga 319 |||||||| Sbjct: 14415 gacccgga 14408
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 167 bits (84), Expect = 3e-38 Identities = 117/128 (91%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 20466 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 20525 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| |||||||||||| ||||| ||||||||||||||||| ||||| || || Sbjct: 20526 tcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctgtcggcc 20585 Query: 312 gacccgga 319 |||||||| Sbjct: 20586 gacccgga 20593
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 167 bits (84), Expect = 3e-38 Identities = 117/128 (91%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 220 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 279 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| |||||||||||| ||||| ||||||||||||||||| ||||| || || Sbjct: 280 tcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctgtcggcc 339 Query: 312 gacccgga 319 |||||||| Sbjct: 340 gacccgga 347
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 167 bits (84), Expect = 3e-38 Identities = 117/128 (91%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 220 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 279 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| |||||||||||| ||||| ||||||||||||||||| ||||| || || Sbjct: 280 tcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctgtcggcc 339 Query: 312 gacccgga 319 |||||||| Sbjct: 340 gacccgga 347
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 167 bits (84), Expect = 3e-38 Identities = 117/128 (91%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 222 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 281 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| |||||||||||| ||||| ||||||||||||||||| ||||| || || Sbjct: 282 tcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctgtcggcc 341 Query: 312 gacccgga 319 |||||||| Sbjct: 342 gacccgga 349
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 167 bits (84), Expect = 3e-38 Identities = 117/128 (91%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 222 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 281 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| |||||||||||| ||||| ||||||||||||||||| ||||| || || Sbjct: 282 tcctacctcaccggcgagttccccggcgactacggctgggacaccgccgggctgtcggcc 341 Query: 312 gacccgga 319 |||||||| Sbjct: 342 gacccgga 349
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 161 bits (81), Expect = 2e-36 Identities = 119/131 (90%), Gaps = 3/131 (2%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc---gagccc 248 ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 624 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggccgcgagccg 683 Query: 249 ccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctct 308 ||||||||||| | |||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 684 ccgagctacctgaccggcgagttccccggcgactacgggtgggacaccgcggggctctcc 743 Query: 309 gctgacccgga 319 || |||||||| Sbjct: 744 gccgacccgga 754
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding protein Length = 2261 Score = 159 bits (80), Expect = 7e-36 Identities = 116/128 (90%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||| ||| Sbjct: 1151 agcccgtggtacggccccgaccgcgtgctgtacctgggcccactgtccggcgagccgccg 1210 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| | ||||||||||||||||| ||||||||||||||||||||||| || || Sbjct: 1211 agctacctgacgggcgagttcccgggcgactacggctgggacaccgcggggctgtcggcg 1270 Query: 312 gacccgga 319 |||||||| Sbjct: 1271 gacccgga 1278
>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein LHCP Length = 967 Score = 159 bits (80), Expect = 7e-36 Identities = 116/128 (90%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||| ||| Sbjct: 203 agcccgtggtacggccccgaccgcgtgctgtacctgggcccactgtccggcgagccgccg 262 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| | ||||||||||||||||| ||||||||||||||||||||||| || || Sbjct: 263 agctacctgacgggcgagttcccgggcgactacggctgggacaccgcggggctgtcggcg 322 Query: 312 gacccgga 319 |||||||| Sbjct: 323 gacccgga 330
>gb|AY109324.1| Zea mays CL187_1 mRNA sequence Length = 2262 Score = 159 bits (80), Expect = 7e-36 Identities = 116/128 (90%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||| ||| Sbjct: 1151 agcccgtggtacggccccgaccgcgtgctgtacctgggcccactgtccggcgagccgccg 1210 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| | ||||||||||||||||| ||||||||||||||||||||||| || || Sbjct: 1211 agctacctgacgggcgagttcccgggcgactacggctgggacaccgcggggctgtcggcg 1270 Query: 312 gacccgga 319 |||||||| Sbjct: 1271 gacccgga 1278
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 159 bits (80), Expect = 7e-36 Identities = 116/128 (90%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 181 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 240 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||||||| |||||||||| | ||||| ||||||||||||||||| ||||| || || Sbjct: 241 tcctacctcaccggcgagttctccggcgactacggctgggacaccgccgggctgtcggcc 300 Query: 312 gacccgga 319 |||||||| Sbjct: 301 gacccgga 308
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 153 bits (77), Expect = 4e-34 Identities = 118/131 (90%), Gaps = 3/131 (2%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggc---gagccc 248 ||||||||||||||| |||||||||| |||||||||||||||||||| ||| ||||| Sbjct: 585 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctcgggccgcgagccg 644 Query: 249 ccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctct 308 ||||||||||||| |||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 645 ccgagctacctcaccggcgagttccccggcgactacgggtgggacaccgcggggctctcc 704 Query: 309 gctgacccgga 319 || |||||||| Sbjct: 705 gccgacccgga 715 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 459 accatggcgctctcctcccc 478
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 141 bits (71), Expect = 2e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccc 249 ||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1019 gcagcccctggtacggccccgaccgcgtcaagtacctcggccccttctccggcgagcccc 1078 Query: 250 cgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggct 304 |||||||||||| |||||||||||| ||||| ||||||||||||||||| ||||| Sbjct: 1079 cgagctacctcaccggcgagttccccggcgactacggctgggacaccgccgggct 1133
>gb|BC029947.1| Homo sapiens, clone IMAGE:5196281, mRNA Length = 114 Score = 129 bits (65), Expect = 6e-27 Identities = 101/112 (90%), Gaps = 7/112 (6%) Strand = Plus / Plus Query: 38 cagcagcttgctctgttccatccggcagcaagcaatggcggccacgacca---tggcgct 94 ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| Sbjct: 1 cagcagcttgctctgttccatccggcagcaa----tggcggccaccaccaccatggcgct 56 Query: 95 ctcctcccccgcgatgaagctcgccggagcctcgtacgtcctcggcggcggc 146 ||||||||||||||| ||||||||||||||||| |||| ||||||||||||| Sbjct: 57 ctcctcccccgcgatcaagctcgccggagcctcctacgccctcggcggcggc 108
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds Length = 1191 Score = 119 bits (60), Expect = 6e-24 Identities = 111/128 (86%) Strand = Plus / Plus Query: 189 agcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagccc 248 |||||||||||||||||| | ||||| |||||||||||||||||||| |||||||||||| Sbjct: 339 agcagcccgtggtacggctctgaccgtgtgctctacctcggcccgctttccggcgagccc 398 Query: 249 ccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctct 308 || |||||| | | || |||||||| || || || || ||||||||||| |||||||| Sbjct: 399 cccagctacttgactggtgagttccccggtgactatgggtgggacaccgccgggctctcg 458 Query: 309 gctgaccc 316 |||||||| Sbjct: 459 gctgaccc 466
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 105 bits (53), Expect = 9e-20 Identities = 113/133 (84%) Strand = Plus / Plus Query: 184 cctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcg 243 ||||||||||||| |||||||| | || || ||||||||||||||||| ||||| ||| Sbjct: 152 cctccagcagcccatggtacggagctgatcgtgtgctctacctcggcccactctctcgcg 211 Query: 244 agcccccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggc 303 ||||||| |||||||||| ||| || ||||| || || ||||| |||||||| || || | Sbjct: 212 agcccccaagctacctcaccggtgatttccccggtgactacgggtgggacacggctggac 271 Query: 304 tctctgctgaccc 316 ||||||||||||| Sbjct: 272 tctctgctgaccc 284
>emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b binding protein (cab gene) Length = 760 Score = 103 bits (52), Expect = 3e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 189 agcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagccc 248 |||||||||||||||||| | ||||| ||||||||||||||| |||| |||||||| ||| Sbjct: 134 agcagcccgtggtacggctctgaccgtgtgctctacctcggctcgctttccggcgaaccc 193 Query: 249 ccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctct 308 || |||||| | | || |||||||| || || || || ||||||||||| |||||||| Sbjct: 194 cccagctacttgactggtgagttccccggtgactatgggtgggacaccgccgggctctcg 253 Query: 309 gctgaccc 316 |||||||| Sbjct: 254 gctgaccc 261
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 103 bits (52), Expect = 3e-19 Identities = 115/136 (84%) Strand = Plus / Plus Query: 184 cctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcg 243 ||||| ||||||| |||||||| | ||||| ||||||||||||||||| |||||||| | Sbjct: 143 cctccggcagcccatggtacggtgctgaccgtgtgctctacctcggcccactctccggtg 202 Query: 244 agcccccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggc 303 |||| ||||||||||| | ||| |||||||| ||||| || || |||||||| || || | Sbjct: 203 agcctccgagctacctgaccggtgagttccctggcgactatgggtgggacactgctggac 262 Query: 304 tctctgctgacccgga 319 | || ||||||||||| Sbjct: 263 tttcggctgacccgga 278
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 101 bits (51), Expect = 1e-18 Identities = 114/135 (84%) Strand = Plus / Plus Query: 185 ctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcga 244 |||| ||||||| |||||||| |||||||||| || ||||| |||||||| |||||| Sbjct: 2055 ctccggcagcccctggtacggtgccgaccgcgtcctgtacctgggcccgctgtccggctc 2114 Query: 245 gcccccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggct 304 || ||||||||||| | |||||||||||| ||||| ||||| |||||||||| |||||| Sbjct: 2115 acctccgagctacctgaccggcgagttccccggcgactacgggtgggacaccgaggggct 2174 Query: 305 ctctgctgacccgga 319 || || |||||||| Sbjct: 2175 gtcggcggacccgga 2189 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 130 acgtcctcggcggcggccgcatcaccatgcgcatgaccgcggccaag 176 ||||| |||||| ||||||||||||||||||| |||||| |||||| Sbjct: 1994 acgtcttcggcgagggccgcatcaccatgcgcaagaccgccgccaag 2040
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 97.6 bits (49), Expect = 2e-17 Identities = 112/133 (84%) Strand = Plus / Plus Query: 184 cctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcg 243 ||||| ||||||| |||||||| ||||||||||| ||||| |||||| ||||||||| Sbjct: 528 cctccggcagcccctggtacgggcccgaccgcgtcaagtacctaggcccgttctccggcg 587 Query: 244 agcccccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggc 303 || | ||| |||||| | |||||||||| | ||||| ||||||||||||||||| |||| Sbjct: 588 aggcgccgtcctacctgaccggcgagttcgccggcgactacggctgggacaccgccgggc 647 Query: 304 tctctgctgaccc 316 |||| || ||||| Sbjct: 648 tctcggccgaccc 660
>gb|AY389606.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 40 mRNA, complete cds Length = 859 Score = 93.7 bits (47), Expect = 3e-16 Identities = 107/127 (84%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccc 249 ||||||||||||||||||| ||||| || |||||||||||| ||||||||||| ||| Sbjct: 194 gcagcccgtggtacggcccggaccgtgtcaagtacctcggcccgttctccggcgaggccc 253 Query: 250 cgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctg 309 | ||||||| |||||| ||||| ||||| ||||| ||||||||||| |||||||| | Sbjct: 254 catcatacctcaccggcgaattccccggcgactacgggtgggacaccgccgggctctccg 313 Query: 310 ctgaccc 316 | ||||| Sbjct: 314 ccgaccc 320
>dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds Length = 695 Score = 89.7 bits (45), Expect = 5e-15 Identities = 111/133 (83%) Strand = Plus / Plus Query: 184 cctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcg 243 ||||| ||||||| ||||||||||||||| | || ||||||||||| ||||||||| Sbjct: 42 cctccggcagcccctggtacggccccgacagagtcaagtacctcggccccttctccggcg 101 Query: 244 agcccccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggc 303 || |||| ||||||| |||||||||| | ||||| ||||||||||||||||| |||| Sbjct: 102 aggccccctcatacctcaccggcgagttcgccggcgactacggctgggacaccgccgggc 161 Query: 304 tctctgctgaccc 316 |||| || ||||| Sbjct: 162 tctccgccgaccc 174
>gb|AY389553.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein (CAB) mRNA, partial cds Length = 720 Score = 85.7 bits (43), Expect = 8e-14 Identities = 106/127 (83%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccc 249 |||||||||||||||||||||| || || |||||||||||| ||||||| ||| | | Sbjct: 178 gcagcccgtggtacggccccgaacgtgtcaagtacctcggcccgttctccggtgaggcac 237 Query: 250 cgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctg 309 | ||||||| ||| |||||||| ||||| ||||||||||||||||| |||||||| | Sbjct: 238 catcatacctcaccggtgagttccccggcgactacggctgggacaccgccgggctctcag 297 Query: 310 ctgaccc 316 | ||||| Sbjct: 298 cggaccc 304
>gb|AY389549.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 3C (LHCP) mRNA, partial cds Length = 661 Score = 85.7 bits (43), Expect = 8e-14 Identities = 106/127 (83%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccc 249 |||||||||||||||||||||| || || |||||||||||| ||||||| ||| | | Sbjct: 13 gcagcccgtggtacggccccgaacgtgtcaagtacctcggcccgttctccggtgaggcac 72 Query: 250 cgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctg 309 | ||||||| ||| |||||||| ||||| ||||||||||||||||| |||||||| | Sbjct: 73 catcatacctcaccggtgagttccccggcgactacggctgggacaccgccgggctctcag 132 Query: 310 ctgaccc 316 | ||||| Sbjct: 133 cggaccc 139
>gb|AY171229.1| Chlamydomonas reinhardtii light-harvesting complex II protein (Lhcb) mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 79.8 bits (40), Expect = 5e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 240 ggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcg 299 |||||||||||||||||||| | ||||||||||| || || ||||||||||||||||| Sbjct: 183 ggcgagcccccgagctacctgactggcgagttccccggtgactacggctgggacaccgcc 242 Query: 300 gggctctctgctgacccgga 319 || || || ||||||||||| Sbjct: 243 ggtctgtccgctgacccgga 262
>emb|AJ000765.1|CRAJ765 Chlamydomonas reinhardtii mRNA for calreticulin Length = 2336 Score = 79.8 bits (40), Expect = 5e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 240 ggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcg 299 |||||||||||||||||||| | ||||||||||| || || ||||||||||||||||| Sbjct: 239 ggcgagcccccgagctacctgactggcgagttccccggtgactacggctgggacaccgcc 180 Query: 300 gggctctctgctgacccgga 319 || || || ||||||||||| Sbjct: 179 ggcctgtccgctgacccgga 160
>gb|AF479777.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m10 (Lhcbm10) mRNA, complete cds Length = 1077 Score = 79.8 bits (40), Expect = 5e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 240 ggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcg 299 |||||||||||||||||||| | ||||||||||| || || ||||||||||||||||| Sbjct: 181 ggcgagcccccgagctacctgactggcgagttccccggtgactacggctgggacaccgcc 240 Query: 300 gggctctctgctgacccgga 319 || || || ||||||||||| Sbjct: 241 ggtctgtccgctgacccgga 260
>gb|DQ355993.1| Brassica napus chlorophyll a/b binding protein (LHB1B2) mRNA, partial cds Length = 226 Score = 79.8 bits (40), Expect = 5e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 237 tccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggacacc 296 ||||| ||||||||||||||||||| ||| |||||||| || || ||||| ||||||||| Sbjct: 1 tccggagagcccccgagctacctcaccggagagttccccggagactacggatgggacacc 60 Query: 297 gcggggctctctgctgaccc 316 || || ||||| |||||||| Sbjct: 61 gccggtctctccgctgaccc 80
>dbj|AB051210.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 988 Score = 79.8 bits (40), Expect = 5e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 240 ggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcg 299 |||||||||||||||||||| | ||||||||||| || || ||||||||||||||||| Sbjct: 167 ggcgagcccccgagctacctgactggcgagttccccggtgactacggctgggacaccgcc 226 Query: 300 gggctctctgctgacccgga 319 || || || ||||||||||| Sbjct: 227 ggtctgtccgctgacccgga 246
>gb|AY389573.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 40 (LHCP) mRNA, partial cds Length = 712 Score = 77.8 bits (39), Expect = 2e-11 Identities = 105/127 (82%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccc 249 ||||||| ||||||||||| ||||| || |||||||||||| ||||||| ||| | | Sbjct: 98 gcagcccctggtacggcccggaccgtgtcaagtacctcggcccgttctccggtgaggcac 157 Query: 250 cgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctg 309 | ||||||| ||| |||||||| ||||| ||||||||||||||||| |||||||| | Sbjct: 158 catcatacctcaccggtgagttccccggcgactacggctgggacaccgccgggctctccg 217 Query: 310 ctgaccc 316 | ||||| Sbjct: 218 cggaccc 224
>emb|AJ843976.1| Plantago major partial mRNA for light harvesting protein 1 (lhc1 gene) Length = 688 Score = 77.8 bits (39), Expect = 2e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 186 tccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgag 245 ||||||||||||||||||||||| |||||||| ||| | || || ||||||| ||| Sbjct: 25 tccagcagcccgtggtacggccctgaccgcgttaagtacttggggccattctccggtgag 84 Query: 246 cccccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctc 305 ||||||||||| | | ||| |||||||| || || |||||||||||||| || || ||| Sbjct: 85 tccccgagctacttgaccggtgagttccccggtgactacggctgggacactgctggactc 144 Query: 306 tctgctgaccc 316 || |||||||| Sbjct: 145 tcagctgaccc 155
>gb|AF139467.2|AF139467 Vigna radiata LHCII type I chlorophyll a/b binding protein (CipLhcb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 975 Score = 75.8 bits (38), Expect = 8e-11 Identities = 71/82 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||| |||||||| |||||||||||| || || ||||| ||||||| Sbjct: 234 tctccggcgagcccccgtcctacctcaccggcgagttcccaggtgactacggttgggaca 293 Query: 295 ccgcggggctctctgctgaccc 316 | || ||||| || |||||||| Sbjct: 294 ctgctgggctttccgctgaccc 315
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 233 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 292 Query: 315 ccgga 319 ||||| Sbjct: 293 ccgga 297
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 257 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 316 Query: 315 ccgga 319 ||||| Sbjct: 317 ccgga 321
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 257 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 316 Query: 315 ccgga 319 ||||| Sbjct: 317 ccgga 321
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 259 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 318 Query: 315 ccgga 319 ||||| Sbjct: 319 ccgga 323
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 262 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 321 Query: 315 ccgga 319 ||||| Sbjct: 322 ccgga 326
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 262 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 321 Query: 315 ccgga 319 ||||| Sbjct: 322 ccgga 326
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 264 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 323 Query: 315 ccgga 319 ||||| Sbjct: 324 ccgga 328
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 297 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 356 Query: 315 ccgga 319 ||||| Sbjct: 357 ccgga 361
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 22434270 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 22434329 Query: 315 ccgga 319 ||||| Sbjct: 22434330 ccgga 22434334
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 95337 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 95396 Query: 315 ccgga 319 ||||| Sbjct: 95397 ccgga 95401
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 262 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 321 Query: 315 ccgga 319 ||||| Sbjct: 322 ccgga 326
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 262 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 321 Query: 315 ccgga 319 ||||| Sbjct: 322 ccgga 326
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 262 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 321 Query: 315 ccgga 319 ||||| Sbjct: 322 ccgga 326
>emb|X63197.1|HVLHBC H.vulgare lhbC mRNA for type III LHCII CAB precursor protein Length = 928 Score = 73.8 bits (37), Expect = 3e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 263 cggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 |||||||||||| ||||| ||||||||||||||||| ||||| ||||| |||||||| Sbjct: 243 cggcgagttccccggcgactacggctgggacaccgccgggctttctgccgacccgga 299
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 233 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 292 Query: 315 ccgga 319 ||||| Sbjct: 293 ccgga 297
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 262 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 321 Query: 315 ccgga 319 ||||| Sbjct: 322 ccgga 326
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 257 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 316 Query: 315 ccgga 319 ||||| Sbjct: 317 ccgga 321
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 257 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 316 Query: 315 ccgga 319 ||||| Sbjct: 317 ccgga 321
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 262 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 321 Query: 315 ccgga 319 ||||| Sbjct: 322 ccgga 326
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 258 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 317 Query: 315 ccgga 319 ||||| Sbjct: 318 ccgga 322
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 264 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 323 Query: 315 ccgga 319 ||||| Sbjct: 324 ccgga 328
>gb|AF022738.1|AF022738 Oryza sativa chlorophyll a-b binding protein mRNA, complete cds Length = 1105 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| || ||| Sbjct: 238 tacctgaggggcgagttcccgggcgactacgggtgggacacggcggggctctccgcggac 297 Query: 315 ccgga 319 ||||| Sbjct: 298 ccgga 302
>ref|NM_001036402.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant AT2G34410.3 mRNA, complete cds Length = 3299 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 3065 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 3006 Query: 295 ccgc 298 |||| Sbjct: 3005 ccgc 3002
>ref|NM_001036401.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant AT2G34410.2 mRNA, complete cds Length = 3338 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 3104 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 3045 Query: 295 ccgc 298 |||| Sbjct: 3044 ccgc 3041
>ref|NM_128994.2| Arabidopsis thaliana LHB1B2; chlorophyll binding AT2G34420 (LHB1B2) transcript variant AT2G34420.1 mRNA, complete cds Length = 1354 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 234 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 293 Query: 295 ccgc 298 |||| Sbjct: 294 ccgc 297
>ref|NM_179900.1| Arabidopsis thaliana LHB1B2 AT2G34420 (LHB1B2) transcript variant AT2G34420.2 mRNA, complete cds Length = 1312 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 234 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 293 Query: 295 ccgc 298 |||| Sbjct: 294 ccgc 297
>ref|XM_483142.1| Oryza sativa (japonica cultivar-group), mRNA Length = 426 Score = 71.9 bits (36), Expect = 1e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 ||||||||| |||||||||||||||||| |||||||| ||||||||||||| Sbjct: 350 gcagcccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 401
>gb|AY142513.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 829 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 179 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 238 Query: 295 ccgc 298 |||| Sbjct: 239 ccgc 242
>gb|AY045806.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 1015 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 234 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 293 Query: 295 ccgc 298 |||| Sbjct: 294 ccgc 297
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 93822 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 93763 Query: 295 ccgc 298 |||| Sbjct: 93762 ccgc 93759 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| ||||||| Sbjct: 95486 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 95545 Query: 295 c 295 | Sbjct: 95546 c 95546
>gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete sequence Length = 93060 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 80380 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 80439 Query: 295 ccgc 298 |||| Sbjct: 80440 ccgc 80443 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| ||||||| Sbjct: 78716 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 78657 Query: 295 c 295 | Sbjct: 78656 c 78656
>gb|AY081587.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 883 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 179 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 238 Query: 295 ccgc 298 |||| Sbjct: 239 ccgc 242
>gb|AY079110.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 798 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 179 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 238 Query: 295 ccgc 298 |||| Sbjct: 239 ccgc 242
>gb|AY079101.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 798 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 179 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 238 Query: 295 ccgc 298 |||| Sbjct: 239 ccgc 242
>gb|AY065125.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein (At2g34420; T31E10.24) mRNA, complete cds Length = 969 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 295 ccgc 298 |||| Sbjct: 290 ccgc 293
>gb|AF419587.1|AF419587 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 295 ccgc 298 |||| Sbjct: 290 ccgc 293
>gb|AF419548.1|AF419548 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 295 ccgc 298 |||| Sbjct: 290 ccgc 293
>gb|AF428397.1|AF428397 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 1024 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 295 ccgc 298 |||| Sbjct: 290 ccgc 293
>gb|AY039561.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 995 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 295 ccgc 298 |||| Sbjct: 290 ccgc 293
>gb|AF372886.1|AF372886 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 289 Query: 295 ccgc 298 |||| Sbjct: 290 ccgc 293
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 71.9 bits (36), Expect = 1e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 ||||||||| |||||||||||||||||| |||||||| ||||||||||||| Sbjct: 24462467 gcagcccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 24462518
>emb|BX814757.1|CNS0AEAM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB92ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 409 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 239 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 180 Query: 295 ccgc 298 |||| Sbjct: 179 ccgc 176
>emb|BX821952.1|CNS0AABH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 949 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 209 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 268 Query: 295 ccgc 298 |||| Sbjct: 269 ccgc 272
>emb|BX821505.1|CNS0A93G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL46ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 959 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 221 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 280 Query: 295 ccgc 298 |||| Sbjct: 281 ccgc 284
>emb|BX820019.1|CNS0A9C1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZC05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 903 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 211 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 270 Query: 295 ccgc 298 |||| Sbjct: 271 ccgc 274
>emb|BX820007.1|CNS0A9CM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZF09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 885 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 214 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 273 Query: 295 ccgc 298 |||| Sbjct: 274 ccgc 277
>emb|BX821638.1|CNS0A92F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL5ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 911 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 214 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 273 Query: 295 ccgc 298 |||| Sbjct: 274 ccgc 277
>emb|BX822910.1|CNS0A63G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 919 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 705 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 646 Query: 295 ccgc 298 |||| Sbjct: 645 ccgc 642
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 194 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 |||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 37953 cccgtggtacggccccgaccgcgtcatctacctccgcccgctctccgg 37906
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 71.9 bits (36), Expect = 1e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 ||||||||| |||||||||||||||||| |||||||| ||||||||||||| Sbjct: 78183 gcagcccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 78234
>emb|X64460.1|ATLH1B2 A.thaliana Lhb1B2 gene for photosystem II chlorophyll a/b binding protein Length = 1405 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||||||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 479 tctccggcgagcccccgagctaccttaccggtgagttccccggtgactacggatgggaca 538 Query: 295 ccgc 298 |||| Sbjct: 539 ccgc 542
>ref|NM_190738.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 69.9 bits (35), Expect = 5e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 194 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccg 240 |||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 483 cccgtggtacggccccgaccgcgtcatctacctccgcccgctctccg 529
>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full insert sequence Length = 1040 Score = 65.9 bits (33), Expect = 7e-08 Identities = 57/65 (87%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||| || ||||||||||||||||| || || |||||||| ||||||||||| || ||| Sbjct: 262 tacctgaggggcgagttcccgggcgactatgggtgggacacggcggggctctccgcggac 321 Query: 315 ccgga 319 ||||| Sbjct: 322 ccgga 326
>dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10J15, TM0007, complete sequence Length = 92741 Score = 65.9 bits (33), Expect = 7e-08 Identities = 102/125 (81%) Strand = Plus / Minus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||| ||||||||||| |||||||| ||| | ||||| ||||||| ||||||||| Sbjct: 66218 agcccatggtacggcccagaccgcgtcaaatacttgggcccattctccggtgagcccccg 66159 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgct 311 |||| | | ||| |||||||| || || |||||||||||||| || ||||| |||||| Sbjct: 66158 tcctacttgaccggtgagttccccggtgactacggctgggacactgctgggctttctgct 66099 Query: 312 gaccc 316 ||||| Sbjct: 66098 gaccc 66094
>gb|U39475.1|GMU39475 Glycine max chlorophyll a/b-binding protein (cab3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 977 Score = 65.9 bits (33), Expect = 7e-08 Identities = 93/113 (82%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||| ||||||||||| |||||||| ||| | ||||| |||| |||||||||||| Sbjct: 164 agcccatggtacggcccagaccgcgtcaagtacttgggcccattctctggcgagcccccg 223 Query: 252 agctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggct 304 |||||||| ||||||||||| || || |||||||||||||| || ||||| Sbjct: 224 tcctacctcactggcgagttcccaggtgactacggctgggacactgctgggct 276
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 194 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 ||||| |||||||||||||||||| |||||||| ||||||||||||| Sbjct: 62463 cccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 62510
>gb|AF495472.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m6 mRNA, complete cds; nuclear gene for chloroplast product Length = 1094 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 264 ggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||| ||||| ||||||||||||||||| || || || ||||||||||| Sbjct: 214 ggcgagttccccggcgactacggctgggacaccgccggcctgtccgctgacccgga 269
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 194 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 ||||| |||||||||||||||||| |||||||| ||||||||||||| Sbjct: 17802509 cccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 17802556
>gb|AF330793.1|AF330793 Chlamydomonas reinhardtii light-harvesting complex II protein precursor (cabII-2) mRNA, complete cds Length = 1068 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 264 ggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||| ||||| ||||||||||||||||| || || || ||||||||||| Sbjct: 187 ggcgagttccccggcgactacggctgggacaccgccggtctgtcggctgacccgga 242
>gb|M24072.1|CRECABA C.reinhardtii encoding chlorophyll a/b-binding protein (cabII-1) gene, complete cds Length = 2290 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 264 ggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||| ||||| ||||||||||||||||| || || || ||||||||||| Sbjct: 989 ggcgagttccccggcgactacggctgggacaccgccggcctgtccgctgacccgga 1044
>dbj|AB051209.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1256 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 264 ggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||| ||||| ||||||||||||||||| || || || ||||||||||| Sbjct: 203 ggcgagttccccggcgactacggctgggacaccgccggtctgtcggctgacccgga 258
>dbj|AB051208.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1107 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 264 ggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||| ||||| ||||||||||||||||| || || || ||||||||||| Sbjct: 233 ggcgagttccccggcgactacggctgggacaccgccggtctgtcggctgacccgga 288
>dbj|AB051205.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1508 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 264 ggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||| ||||| ||||||||||||||||| || || || ||||||||||| Sbjct: 651 ggcgagttccccggcgactacggctgggacaccgccggtctgtcggctgacccgga 706
>dbj|AB051204.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1835 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 264 ggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||| ||||| ||||||||||||||||| || || || ||||||||||| Sbjct: 861 ggcgagttccccggcgactacggctgggacaccgccggtctgtcggctgacccgga 916
>gb|DQ226787.1| Boechera divaricarpa isolate SLW-B-B06 mRNA sequence Length = 827 Score = 60.0 bits (30), Expect = 5e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||| ||||||||||||| || |||||||| || || ||||| ||||||| Sbjct: 13 tctccggcgagccaccgagctacctcacaggagagttccccggagactacggatgggaca 72 Query: 295 ccgcggggctctctgctgaccc 316 | || || || || |||||||| Sbjct: 73 cagctggcctatccgctgaccc 94
>gb|DQ122900.1| Chlamydomonas incerta chloroplast light-harvesting chlorophyll-a/b binding protein (LhcII-1.3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1100 Score = 60.0 bits (30), Expect = 5e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 254 ctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctga 313 |||||| | |||||||||||| || || ||||||||||||||||| || || || ||||| Sbjct: 189 ctacctgaccggcgagttccccggtgactacggctgggacaccgccggcctgtcggctga 248 Query: 314 cccgga 319 |||||| Sbjct: 249 cccgga 254
>gb|AF458406.1|AF458406 Brassica oleracea chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 980 Score = 60.0 bits (30), Expect = 5e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||| |||||||| |||||||||| || |||||||| || || ||||| ||||||| Sbjct: 224 tctccggagagcccccaagctacctcacaggagagttccccggtgactacggatgggaca 283 Query: 295 ccgcggggctctctgctgaccc 316 |||| || || || |||||||| Sbjct: 284 ccgccggtctttccgctgaccc 305
>gb|AY198376.1| Citrus limon chlorophyll a/b-binding protein precursor, gene, partial cds; nuclear gene for chloroplast product Length = 647 Score = 60.0 bits (30), Expect = 5e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 |||| ||||||||||| |||||| | | ||| |||||||| ||||| ||||| ||||||| Sbjct: 179 tctctggcgagcccccaagctacttgaccggtgagttccctggcgactacggttgggaca 238 Query: 295 ccgcggggctctctgctgaccc 316 | || ||||| || |||||||| Sbjct: 239 cagccgggctttcagctgaccc 260
>emb|X12981.1|GMCAB3 Soybean Cab3 gene for PSII LHCII chlorophyll a/b binding protein Length = 1361 Score = 60.0 bits (30), Expect = 5e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 |||| |||||||||||| |||||| | ||| |||||||| ||||| ||||||||||||| Sbjct: 426 tctctggcgagcccccgtcctacctaaccggtgagttcccaggcgactacggctgggaca 485 Query: 295 ccgcggggct 304 | || ||||| Sbjct: 486 ctgctgggct 495
>ref|NM_128995.2| Arabidopsis thaliana LHB1B1; chlorophyll binding AT2G34430 (LHB1B1) mRNA, complete cds Length = 1008 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| ||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 303 Query: 295 c 295 | Sbjct: 304 c 304
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete sequence Length = 132981 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 198 tggtacggccccgaccgcgtgctctacctcggcccgctctc 238 |||||||||||||||||||| |||||||| |||||||||| Sbjct: 94169 tggtacggccccgaccgcgtcatctacctccgcccgctctc 94129
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 198 tggtacggccccgaccgcgtgctctacctcggcccgctctc 238 |||||||||||||||||||| |||||||| |||||||||| Sbjct: 18189184 tggtacggccccgaccgcgtcatctacctccgcccgctctc 18189144 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||| || ||||| |||||||| |||||||| || || |||||||| Sbjct: 21808260 gagttcccgggagactacgggtgggacacggcggggctatcggccgacccgga 21808312 Score = 40.1 bits (20), Expect = 4.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgt 217 |||||||||||||||| ||| ||||||| Sbjct: 3503805 gcagcccgtggtacggacccaaccgcgt 3503832
>gb|AY288914.1| Brassica oleracea chlorophyll a/b binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1042 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||| ||||||||||| | ||| ||||||| || || ||||| ||||||| Sbjct: 257 tctccggcgagccaccgagctaccttaccggacagttccccggagactacggatgggaca 316 Query: 295 ccgcggggctctc 307 |||| || ||||| Sbjct: 317 ccgcaggtctctc 329
>gb|AF339687.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34430) mRNA, complete cds Length = 851 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| ||||||| Sbjct: 182 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 241 Query: 295 c 295 | Sbjct: 242 c 242
>gb|AF326864.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34430) mRNA, complete cds Length = 1019 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| ||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 303 Query: 295 c 295 | Sbjct: 304 c 304
>gb|AY120776.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein. (At2g34430) mRNA, complete cds Length = 1003 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| ||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 303 Query: 295 c 295 | Sbjct: 304 c 304
>gb|AF324693.2|AF324693 Arabidopsis thaliana At2g34430 (At2g34430/T31E10.23) mRNA, complete cds Length = 1009 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| ||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 303 Query: 295 c 295 | Sbjct: 304 c 304
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 198 tggtacggccccgaccgcgtgctctacctcggcccgctctc 238 |||||||||||||||||||| |||||||| |||||||||| Sbjct: 18182725 tggtacggccccgaccgcgtcatctacctccgcccgctctc 18182685 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||| || ||||| |||||||| |||||||| || || |||||||| Sbjct: 21801289 gagttcccgggagactacgggtgggacacggcggggctatcggccgacccgga 21801341 Score = 40.1 bits (20), Expect = 4.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgt 217 |||||||||||||||| ||| ||||||| Sbjct: 3503916 gcagcccgtggtacggacccaaccgcgt 3503943
>gb|AY086307.1| Arabidopsis thaliana clone 23727 mRNA, complete sequence Length = 979 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| ||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 303 Query: 295 c 295 | Sbjct: 304 c 304
>emb|X64459.1|ATLHB1B1 A.thaliana Lhb1B1 gene for photosystem II type I chlorophyll a/b binding protein Length = 1301 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| ||||||| Sbjct: 482 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 541 Query: 295 c 295 | Sbjct: 542 c 542
>gb|BT002103.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein. (At2g34430) mRNA, complete cds Length = 853 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| ||||||| Sbjct: 182 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgggtgggaca 241 Query: 295 c 295 | Sbjct: 242 c 242
>gb|DQ226825.1| Boechera divaricarpa isolate SLW-B-H09 mRNA sequence Length = 775 Score = 56.0 bits (28), Expect = 7e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 ||||||||||||| ||||||||||| | ||| |||||||| || || || || ||||||| Sbjct: 13 tctccggcgagccaccgagctaccttaccggagagttccccggtgactatggatgggaca 72 Query: 295 ccgc 298 |||| Sbjct: 73 ccgc 76
>gb|AF479779.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m7 (Lhcbm7) mRNA, complete cds Length = 1016 Score = 56.0 bits (28), Expect = 7e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 268 agttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||| ||||| ||||||||||||||||| || || || ||||||||||| Sbjct: 205 agttccccggcgactacggctgggacaccgccggtctgtcggctgacccgga 256
>gb|AF479778.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m9 (Lhcbm9) mRNA, complete cds Length = 1221 Score = 56.0 bits (28), Expect = 7e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 264 ggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||| ||||| |||||||||||||| || || || || ||||||||||| Sbjct: 206 ggcgagttccccggcgactacggctgggacactgccggtctgtcggctgacccgga 261
>gb|AF133340.1|AF133340 Phalaenopsis sp. 'KCbutterfly' putative chlorophyll a/b-binding protein mRNA, complete cds Length = 1118 Score = 56.0 bits (28), Expect = 7e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 228 ggcccgctctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggc 287 |||||| |||| |||||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 264 ggcccgttctctggcgagccaccttcctacctcactggcgagttccccggtgattacggc 323 Query: 288 tgggacac 295 |||||||| Sbjct: 324 tgggacac 331
>gb|AF104630.1|AF104630 Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb2) mRNA, complete cds Length = 1200 Score = 56.0 bits (28), Expect = 7e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 264 ggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||| ||||| |||||||||||||| || || || || ||||||||||| Sbjct: 211 ggcgagttccccggcgactacggctgggacactgccggtctgtcggctgacccgga 266
>gb|AF247178.1|AF247178 Picea glauca needle chlorophyll a/b-binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1096 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 258 ctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgaccc 316 |||| |||||| || || ||||| ||||| ||||||||||| ||||||||||| ||||| Sbjct: 282 ctcaccggcgaatttcccggcgactacgggtgggacaccgccgggctctctgccgaccc 340
>ref|NM_126537.2| Arabidopsis thaliana LHCB2.2; chlorophyll binding AT2G05070 (LHCB2.2) mRNA, complete cds Length = 1060 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 289 tacggctgggacaccgctggactctcggctgacccgga 326
>ref|NM_001036246.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT2G05060 transcript variant AT2G05060.2 mRNA, complete cds Length = 2130 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 1851 tacggctgggacaccgctggactctcggctgacccgga 1814
>ref|NM_126540.2| Arabidopsis thaliana LHCB2.1; chlorophyll binding AT2G05100 (LHCB2.1) mRNA, complete cds Length = 1068 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 290 tacggctgggacaccgctggactctcggctgacccgga 327
>emb|X16436.1|SACAB Mustard cab gene for chlorophyll a/b-binding protein Length = 2774 Score = 52.0 bits (26), Expect = 0.001 Identities = 68/82 (82%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 |||||||||||||||| |||||||| | || |||||||| || || || || ||||||| Sbjct: 1757 tctccggcgagcccccaagctaccttactggagagttccccggagactatggatgggaca 1816 Query: 295 ccgcggggctctctgctgaccc 316 |||| || || || |||||||| Sbjct: 1817 ccgctggtctatcagctgaccc 1838
>gb|AY045787.1| Arabidopsis thaliana At2g05100 mRNA sequence Length = 1047 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 375 tacggctgggacaccgctggactctcggctgacccgga 412
>gb|AY093372.1| Arabidopsis thaliana putative chlorophyll a/b binding protein (At2g05070) mRNA, complete cds Length = 881 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 229 tacggctgggacaccgctggactctcggctgacccgga 266
>gb|AC007443.5| Arabidopsis thaliana chromosome 2 clone F15L11 map ve013, complete sequence Length = 13145 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 5572 tacggctgggacaccgctggactctcggctgacccgga 5535
>gb|AC007211.6| Arabidopsis thaliana chromosome 2 BAC F1O13 genomic sequence, complete sequence Length = 103889 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 81574 tacggctgggacaccgctggactctcggctgacccgga 81537
>gb|AY066036.1| Arabidopsis thaliana At2g05070/F1O13.20 mRNA, complete cds Length = 798 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 229 tacggctgggacaccgctggactctcggctgacccgga 266
>gb|AY062563.1| Arabidopsis thaliana putative chlorophyll a/b binding protein (At2g05070; F1O13.20) mRNA, complete cds Length = 958 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 289 tacggctgggacaccgctggactctcggctgacccgga 326
>gb|AY054218.1| Arabidopsis thaliana At2g05070/F1O13.20 mRNA, complete cds Length = 929 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 287 tacggctgggacaccgctggactctcggctgacccgga 324
>gb|AY052348.1| Arabidopsis thaliana At2g05100/F15L11.2 mRNA, complete cds Length = 1001 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 288 tacggctgggacaccgctggactctcggctgacccgga 325
>gb|AY052275.1| Arabidopsis thaliana At2g05100/F15L11.2 mRNA, complete cds Length = 943 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 283 tacggctgggacaccgctggactctcggctgacccgga 320
>emb|BX819843.1|CNS0A9GW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS37ZB02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 980 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 268 tacggctgggacaccgctggactctcggctgacccgga 305
>emb|BX819702.1|CNS0A9H1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZH11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 912 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 251 tacggctgggacaccgctggactctcggctgacccgga 288
>emb|BX819347.1|CNS0A9RX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZE07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 270 tacggctgggacaccgctggactctcggctgacccgga 307
>emb|BX819270.1|CNS0A9RF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 937 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 260 tacggctgggacaccgctggactctcggctgacccgga 297
>emb|BX821844.1|CNS0A936 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL79ZE01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 859 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 266 tacggctgggacaccgctggactctcggctgacccgga 303
>emb|BX821132.1|CNS0A9BI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL18ZF10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 941 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 266 tacggctgggacaccgctggactctcggctgacccgga 303
>emb|BX820206.1|CNS0A9D7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 906 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 278 tacggctgggacaccgctggactctcggctgacccgga 315
>emb|BX820202.1|CNS0A9FS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 873 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 272 tacggctgggacaccgctggactctcggctgacccgga 309
>emb|BX819861.1|CNS0A9DS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS3ZD09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 964 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 280 tacggctgggacaccgctggactctcggctgacccgga 317
>emb|BX819688.1|CNS0A9G4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 914 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 249 tacggctgggacaccgctggactctcggctgacccgga 286
>emb|BX819687.1|CNS0A9G3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZE07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 917 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 251 tacggctgggacaccgctggactctcggctgacccgga 288
>emb|BX819668.1|CNS0A9CZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 930 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 277 tacggctgggacaccgctggactctcggctgacccgga 314
>emb|BX819683.1|CNS0A80L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 922 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 251 tacggctgggacaccgctggactctcggctgacccgga 288
>emb|BX819509.1|CNS0A82Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB85ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 926 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 265 tacggctgggacaccgctggactctcggctgacccgga 302
>emb|BX842010.1|CNS09YA7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS22ZD11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 934 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 271 tacggctgggacaccgctggactctcggctgacccgga 308
>gb|AF134124.1| Arabidopsis thaliana Lhcb2 protein (Lhcb2.3) mRNA, complete cds Length = 967 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 278 tacggctgggacaccgctggactctcggctgacccgga 315
>gb|AF134123.1| Arabidopsis thaliana Lhcb2 protein (Lhcb2.2) mRNA, complete cds Length = 943 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 279 tacggctgggacaccgctggactctcggctgacccgga 316
>gb|AF134122.1| Arabidopsis thaliana Lhcb2 protein (Lhcb2.1) mRNA, complete cds Length = 974 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 287 tacggctgggacaccgctggactctcggctgacccgga 324
>emb|X15894.1|SACAB1 Sinapsis alba cab-1 gene for chlorophyll a/b-binding polypeptide Length = 2775 Score = 52.0 bits (26), Expect = 0.001 Identities = 68/82 (82%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 |||||||||||||||| |||||||| | || |||||||| || || || || ||||||| Sbjct: 1758 tctccggcgagcccccaagctaccttactggagagttccccggagactatggatgggaca 1817 Query: 295 ccgcggggctctctgctgaccc 316 |||| || || || |||||||| Sbjct: 1818 ccgctggtctatcagctgaccc 1839
>gb|BT001933.1| Arabidopsis thaliana clone C105385 putative chlorophyll a/b binding protein (At2g05100) mRNA, complete cds Length = 829 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 229 tacggctgggacaccgctggactctcggctgacccgga 266
>gb|M60049.1|DUNCAB D.tertiolecta 28.5-kDa LHCII apoprotein mRNA, complete cds Length = 1041 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgac 314 ||||||| ||||||||||| || || ||||||||||| ||||| || || ||||||||| Sbjct: 202 tacctcactggcgagttccccggtgactacggctgggataccgccggtctgtctgctgac 261 Query: 315 cc 316 || Sbjct: 262 cc 263
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 267 gagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||| || ||||| |||||||| |||||||| || || |||||||| Sbjct: 79556 gagttcccgggagactacgggtgggacacggcggggctatcggccgacccgga 79504
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Minus Query: 181 ccacctccagcagcccgtggtacggccccgaccgcgt 217 ||||||| |||||||||||||||| ||||||||||| Sbjct: 76481 ccacctctggcagcccgtggtacggacccgaccgcgt 76445
>gb|AF104631.3| Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb3) mRNA, complete cds Length = 1314 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Plus Query: 264 ggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgaccc 316 ||||||||||| ||||| |||||||||||| |||| || || || |||||||| Sbjct: 256 ggcgagttccccggcgactacggctgggactccgccggtctgtcggctgaccc 308
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Plus Query: 181 ccacctccagcagcccgtggtacggccccgaccgcgt 217 ||||||| |||||||||||||||| ||||||||||| Sbjct: 18136647 ccacctctggcagcccgtggtacggacccgaccgcgt 18136683
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Plus Query: 181 ccacctccagcagcccgtggtacggccccgaccgcgt 217 ||||||| |||||||||||||||| ||||||||||| Sbjct: 18145900 ccacctctggcagcccgtggtacggacccgaccgcgt 18145936
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||| || ||||| |||||||| |||||||| || || |||||||| Sbjct: 248 gagttcccgggagactacgggtgggacacggcggggctatcggccgacccgga 300
>gb|AF017998.1|AF017998 Tetraselmis sp. RG-15 chlorophyll a/b binding protein (LHCPII) gene, complete cds Length = 2095 Score = 50.1 bits (25), Expect = 0.004 Identities = 40/45 (88%) Strand = Plus / Plus Query: 254 ctacctcagcggcgagttcccgggcgattacggctgggacaccgc 298 |||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 1146 ctacctcactggcgagttccccggtgactacggctgggacaccgc 1190
>dbj|AU066541.1| Chlamydomonas sp. HS-5 mRNA for hypothetical protein, NaCl+paraquat inducible, partial cds, clone:M27 Length = 687 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Plus Query: 263 cggcgagttcccgggcgattacggctgggacac 295 ||||||||| |||||||| |||||||||||||| Sbjct: 181 cggcgagtttccgggcgactacggctgggacac 213
>dbj|AU066540.1| Chlamydomonas sp. HS-5 mRNA for hypothetical protein, NaCl+paraquat inducible, partial cds, clone:M26 Length = 476 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Plus Query: 263 cggcgagttcccgggcgattacggctgggacac 295 |||||||||||| ||||| |||||||||||||| Sbjct: 261 cggcgagttccccggcgactacggctgggacac 293
>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||| || ||||| |||||||| |||||||| || || |||||||| Sbjct: 240 gagttcccgggagactacgggtgggacacggcggggctatcggccgacccgga 292
>ref|NM_102733.2| Arabidopsis thaliana CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding AT1G29930 (CAB1) mRNA, complete cds Length = 1044 Score = 48.1 bits (24), Expect = 0.017 Identities = 57/68 (83%) Strand = Plus / Plus Query: 249 ccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctct 308 ||||||||||| | ||| |||||||| || || ||||| ||||||||||| || || || Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 324 Query: 309 gctgaccc 316 |||||||| Sbjct: 325 gctgaccc 332
>ref|NM_102731.2| Arabidopsis thaliana CAB3 (CHLOROPHYLL A/B BINDING PROTEIN 3); chlorophyll binding AT1G29910 (CAB3) mRNA, complete cds Length = 1020 Score = 48.1 bits (24), Expect = 0.017 Identities = 54/64 (84%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 |||| |||||| | ||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 238 tctctggcgagtcaccgagctaccttaccggagagttccccggagactacggatgggaca 297 Query: 295 ccgc 298 |||| Sbjct: 298 ccgc 301
>gb|BT015572.1| Arabidopsis thaliana At1g29910 mRNA sequence Length = 762 Score = 48.1 bits (24), Expect = 0.017 Identities = 54/64 (84%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 |||| |||||| | ||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 143 tctctggcgagtcaccgagctaccttaccggagagttccccggagactacggatgggaca 202 Query: 295 ccgc 298 |||| Sbjct: 203 ccgc 206
>gb|AY091169.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein (At1g29930) mRNA, complete cds Length = 835 Score = 48.1 bits (24), Expect = 0.017 Identities = 57/68 (83%) Strand = Plus / Plus Query: 249 ccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctct 308 ||||||||||| | ||| |||||||| || || ||||| ||||||||||| || || || Sbjct: 199 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 258 Query: 309 gctgaccc 316 |||||||| Sbjct: 259 gctgaccc 266
>gb|AY050935.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At1g29930) mRNA, complete cds Length = 1014 Score = 48.1 bits (24), Expect = 0.017 Identities = 57/68 (83%) Strand = Plus / Plus Query: 249 ccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctct 308 ||||||||||| | ||| |||||||| || || ||||| ||||||||||| || || || Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 324 Query: 309 gctgaccc 316 |||||||| Sbjct: 325 gctgaccc 332
>gb|AY114594.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29910) mRNA, complete cds Length = 870 Score = 48.1 bits (24), Expect = 0.017 Identities = 54/64 (84%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 |||| |||||| | ||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 185 tctctggcgagtcaccgagctaccttaccggagagttccccggagactacggatgggaca 244 Query: 295 ccgc 298 |||| Sbjct: 245 ccgc 248
>gb|AY065165.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29910; F1N18.5) mRNA, complete cds Length = 1019 Score = 48.1 bits (24), Expect = 0.017 Identities = 54/64 (84%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 |||| |||||| | ||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 238 tctctggcgagtcaccgagctaccttaccggagagttccccggagactacggatgggaca 297 Query: 295 ccgc 298 |||| Sbjct: 298 ccgc 301
>gb|AY058180.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 1019 Score = 48.1 bits (24), Expect = 0.017 Identities = 57/68 (83%) Strand = Plus / Plus Query: 249 ccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctct 308 ||||||||||| | ||| |||||||| || || ||||| ||||||||||| || || || Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 324 Query: 309 gctgaccc 316 |||||||| Sbjct: 325 gctgaccc 332
>gb|AF428359.1|AF428359 Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 1045 Score = 48.1 bits (24), Expect = 0.017 Identities = 57/68 (83%) Strand = Plus / Plus Query: 249 ccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctct 308 ||||||||||| | ||| |||||||| || || ||||| ||||||||||| || || || Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 324 Query: 309 gctgaccc 316 |||||||| Sbjct: 325 gctgaccc 332
>gb|AY045673.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 999 Score = 48.1 bits (24), Expect = 0.017 Identities = 57/68 (83%) Strand = Plus / Plus Query: 249 ccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctct 308 ||||||||||| | ||| |||||||| || || ||||| ||||||||||| || || || Sbjct: 265 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 324 Query: 309 gctgaccc 316 |||||||| Sbjct: 325 gctgaccc 332
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.017 Identities = 42/48 (87%) Strand = Plus / Minus Query: 194 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 |||||||||| | ||||||||||| |||||||| ||| ||||||||| Sbjct: 31814159 cccgtggtacagtcccgaccgcgtcatctacctccgcctgctctccgg 31814112
>emb|BX815726.1|CNS0ACD7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS89ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 930 Score = 48.1 bits (24), Expect = 0.017 Identities = 57/68 (83%) Strand = Plus / Plus Query: 249 ccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctct 308 ||||||||||| | ||| |||||||| || || ||||| ||||||||||| || || || Sbjct: 234 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 293 Query: 309 gctgaccc 316 |||||||| Sbjct: 294 gctgaccc 301
>emb|BX817619.1|CNS0AAVV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZA06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 994 Score = 48.1 bits (24), Expect = 0.017 Identities = 57/68 (83%) Strand = Plus / Plus Query: 249 ccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctct 308 ||||||||||| | ||| |||||||| || || ||||| ||||||||||| || || || Sbjct: 249 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 308 Query: 309 gctgaccc 316 |||||||| Sbjct: 309 gctgaccc 316
>gb|AC022455.5|AC022455 Arabidopsis thaliana chromosome 1 BAC T1P2 genomic sequence, complete sequence Length = 82053 Score = 48.1 bits (24), Expect = 0.017 Identities = 57/68 (83%) Strand = Plus / Plus Query: 249 ccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctct 308 ||||||||||| | ||| |||||||| || || ||||| ||||||||||| || || || Sbjct: 145 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 204 Query: 309 gctgaccc 316 |||||||| Sbjct: 205 gctgaccc 212
>gb|AC008030.4|AC008030 Arabidopsis thaliana chromosome I BAC F1N18 genomic sequence, complete sequence Length = 101075 Score = 48.1 bits (24), Expect = 0.017 Identities = 54/64 (84%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 |||| |||||| | ||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 21923 tctctggcgagtcaccgagctaccttaccggagagttccccggagactacggatgggaca 21982 Query: 295 ccgc 298 |||| Sbjct: 21983 ccgc 21986 Score = 48.1 bits (24), Expect = 0.017 Identities = 57/68 (83%) Strand = Plus / Minus Query: 249 ccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctct 308 ||||||||||| | ||| |||||||| || || ||||| ||||||||||| || || || Sbjct: 16716 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 16657 Query: 309 gctgaccc 316 |||||||| Sbjct: 16656 gctgaccc 16649
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 48.1 bits (24), Expect = 0.017 Identities = 42/48 (87%) Strand = Plus / Minus Query: 194 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 |||||||||| | ||||||||||| |||||||| ||| ||||||||| Sbjct: 109957 cccgtggtacagtcccgaccgcgtcatctacctccgcctgctctccgg 109910
>emb|X03909.1|ATLHCP3 A.thaliana gene (LHCP AB 140) for chlorophyll a/b binding protein Length = 1109 Score = 48.1 bits (24), Expect = 0.017 Identities = 57/68 (83%) Strand = Plus / Plus Query: 249 ccgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctct 308 ||||||||||| | ||| |||||||| || || ||||| ||||||||||| || || || Sbjct: 416 ccgagctaccttaccggagagttccccggagactacggatgggacaccgccggactttca 475 Query: 309 gctgaccc 316 |||||||| Sbjct: 476 gctgaccc 483
>emb|X03908.1|ATLHCP2 A.thaliana gene (LHCP AB 180) for chlorophyll a/b binding protein Length = 1060 Score = 48.1 bits (24), Expect = 0.017 Identities = 54/64 (84%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggctgggaca 294 |||| |||||| | ||||||||||| | ||| |||||||| || || ||||| ||||||| Sbjct: 391 tctctggcgagtcaccgagctaccttaccggagagttccccggagactacggatgggaca 450 Query: 295 ccgc 298 |||| Sbjct: 451 ccgc 454
>emb|X69434.1|CSCAB1 C.stellata cab1 mRNA for chlorophyll a/b binding protein Length = 1067 Score = 48.1 bits (24), Expect = 0.017 Identities = 33/36 (91%) Strand = Plus / Plus Query: 263 cggcgagttcccgggcgattacggctgggacaccgc 298 |||||||||||| || || ||||||||||||||||| Sbjct: 187 cggcgagttccccggtgactacggctgggacaccgc 222
>gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds Length = 1913 Score = 48.1 bits (24), Expect = 0.017 Identities = 48/56 (85%) Strand = Plus / Plus Query: 264 ggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||| ||||| ||||| |||||||| || || ||||| || |||||||| Sbjct: 947 ggcgagttccccggcgactacgggtgggacacggccggcctctccgccgacccgga 1002
>gb|AF495473.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m1 gene, complete cds; nuclear gene for chloroplast product Length = 1934 Score = 46.1 bits (23), Expect = 0.068 Identities = 32/35 (91%) Strand = Plus / Plus Query: 240 ggcgagcccccgagctacctcagcggcgagttccc 274 |||||||||||||||||||| | ||||||||||| Sbjct: 490 ggcgagcccccgagctacctgactggcgagttccc 524 Score = 44.1 bits (22), Expect = 0.27 Identities = 34/38 (89%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || || || ||||||||||| Sbjct: 785 tacggctgggacaccgccggtctgtccgctgacccgga 822
>gb|AF220527.1|AF220527 Euphorbia esula chlorophyll a/b binding protein precursor, mRNA, complete cds Length = 927 Score = 46.1 bits (23), Expect = 0.068 Identities = 101/127 (79%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccc 249 ||||||| ||||||||||| ||||| || ||| | ||||| ||||||| ||||||| Sbjct: 146 gcagcccatggtacggcccagaccgtgttaagtacttgggcccattctccggtgagcccc 205 Query: 250 cgagctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctg 309 | |||||| | | ||| || ||||| || || || ||||||||||| || || ||||| | Sbjct: 206 caagctacttgaccggtgaattccccggtgactatggctgggacactgccggactctcag 265 Query: 310 ctgaccc 316 ||||||| Sbjct: 266 ctgaccc 272
>emb|X54856.1|CMCAB C.moewusii cab mRNA for chlorophyll a/b binding protein Length = 1011 Score = 46.1 bits (23), Expect = 0.068 Identities = 53/63 (84%) Strand = Plus / Plus Query: 254 ctacctcagcggcgagttcccgggcgattacggctgggacaccgcggggctctctgctga 313 |||||| | |||||||||||| || || |||||||||||||| || || || || ||||| Sbjct: 203 ctacctgaccggcgagttccccggtgactacggctgggacactgctggtctgtccgctga 262 Query: 314 ccc 316 ||| Sbjct: 263 ccc 265 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gtggtacggccccgaccgcg 216 |||||||||||||||||||| Sbjct: 146 gtggtacggccccgaccgcg 165
>dbj|AB051206.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 1781 Score = 46.1 bits (23), Expect = 0.068 Identities = 32/35 (91%) Strand = Plus / Plus Query: 240 ggcgagcccccgagctacctcagcggcgagttccc 274 |||||||||||||||||||| | ||||||||||| Sbjct: 403 ggcgagcccccgagctacctgactggcgagttccc 437 Score = 44.1 bits (22), Expect = 0.27 Identities = 34/38 (89%) Strand = Plus / Plus Query: 282 tacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||||||||| || || || ||||||||||| Sbjct: 698 tacggctgggacaccgccggtctgtccgctgacccgga 735
>gb|AY845253.1| Pisum sativum light-harvesting chlorophyll-a/b binding protein Lhcb1 mRNA, complete cds Length = 801 Score = 44.1 bits (22), Expect = 0.27 Identities = 43/50 (86%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggctctctgctgaccc 316 |||||||| || || ||||| |||||||| || || |||||||||||||| Sbjct: 217 gagttccccggtgactacggttgggacactgccggactctctgctgaccc 266
>gb|BT023765.1| Drosophila melanogaster RE18252 full insert cDNA Length = 3550 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 cgcagcagcagccgcacatcag 40 |||||||||||||||||||||| Sbjct: 445 cgcagcagcagccgcacatcag 466
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 cgccggagcctcgtacgtcctcggcg 141 |||||||||| ||||||||||||||| Sbjct: 3741869 cgccggagccgcgtacgtcctcggcg 3741894
>gb|AY617096.1| Picea sitchensis chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 763 Score = 44.1 bits (22), Expect = 0.27 Identities = 34/38 (89%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggct 304 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 234 gagttcccgggtgactacgggtgggacacggcggggct 271
>gb|AY617095.1| Pinus nelsonii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.27 Identities = 34/38 (89%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggct 304 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 234 gagttcccgggtgactacgggtgggacacagcggggct 271
>gb|AY617094.1| Pinus longaeva chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 759 Score = 44.1 bits (22), Expect = 0.27 Identities = 34/38 (89%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggct 304 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 223 gagttcccgggtgactacgggtgggacacwgcggggct 260
>gb|AY617093.1| Pinus remota chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.27 Identities = 34/38 (89%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggct 304 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 234 gagttcccgggtgactacgggtgggacactgcggggct 271
>gb|AY617092.1| Pinus monophylla chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.27 Identities = 34/38 (89%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggct 304 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 234 gagttcccgggtgactacgggtgggacactgcggggct 271
>gb|AY617091.1| Pinus strobus chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.27 Identities = 34/38 (89%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggct 304 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 234 gagttcccgggtgactacgggtgggacacggcggggct 271
>gb|AY617090.1| Pinus monticola chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.27 Identities = 34/38 (89%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggct 304 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 234 gagttcccgggtgactacgggtgggacacggcggggct 271
>gb|AY617089.1| Pinus lambertiana chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.27 Identities = 34/38 (89%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggct 304 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 234 gagttcccgggtgactacgggtgggacacggcggggct 271
>gb|AY617088.1| Pinus flexilis chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.27 Identities = 34/38 (89%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggct 304 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 234 gagttcccgggtgactacgggtgggacacggcggggct 271
>gb|AY617087.1| Pinus chiapensis chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.27 Identities = 34/38 (89%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggct 304 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 234 gagttcccgggtgactacgggtgggacacggcggggct 271
>ref|NM_165165.1| Drosophila melanogaster CG5953-RB, transcript variant B (CG5953), mRNA Length = 3796 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 cgcagcagcagccgcacatcag 40 |||||||||||||||||||||| Sbjct: 707 cgcagcagcagccgcacatcag 728
>ref|NM_135952.1| Drosophila melanogaster CG5953-RA, transcript variant A (CG5953), mRNA Length = 3534 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 cgcagcagcagccgcacatcag 40 |||||||||||||||||||||| Sbjct: 445 cgcagcagcagccgcacatcag 466
>gb|AC007185.12|AC007185 Drosophila melanogaster, chromosome 2L, region 36A-, BAC clone BACR44N04, complete sequence Length = 190651 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 cgcagcagcagccgcacatcag 40 |||||||||||||||||||||| Sbjct: 70485 cgcagcagcagccgcacatcag 70464
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 140 cggcggccgcatcaccatgcgc 161 |||||||||||||||||||||| Sbjct: 123 cggcggccgcatcaccatgcgc 144 Score = 42.1 bits (21), Expect = 1.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 263 cggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 |||||||||||| ||||| ||||| ||||| ||||| || |||| || |||||||| Sbjct: 240 cggcgagttccccggcgactacgggtgggagaccgccggcgtctcggccgacccgga 296
>emb|X56538.1|PSCABIIC P.sativum Cab-8 gene for photosystemm II chlorophyll a/b binding protein Length = 2236 Score = 44.1 bits (22), Expect = 0.27 Identities = 43/50 (86%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggctctctgctgaccc 316 |||||||| || || ||||| |||||||| || || |||||||||||||| Sbjct: 1533 gagttccccggtgactacggttgggacactgccggactctctgctgaccc 1582
>emb|X81810.1|PALHCB122 P.abies (L.)Karst. Lhcb1*2-2 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1050 Score = 44.1 bits (22), Expect = 0.27 Identities = 34/38 (89%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggct 304 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 268 gagttcccgggtgactacgggtgggacacggcggggct 305
>emb|X81809.1|PALHCB12 P.abies (L.)Karst. Lhcb1*2-1 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1062 Score = 44.1 bits (22), Expect = 0.27 Identities = 34/38 (89%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggct 304 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 265 gagttcccgggtgactacgggtgggacacggcggggct 302
>gb|AE003651.2| Drosophila melanogaster chromosome 2L, section 60 of 83 of the complete sequence Length = 254646 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 cgcagcagcagccgcacatcag 40 |||||||||||||||||||||| Sbjct: 166862 cgcagcagcagccgcacatcag 166841
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 cgccggagcctcgtacgtcctcggcg 141 |||||||||| ||||||||||||||| Sbjct: 3726293 cgccggagccgcgtacgtcctcggcg 3726318
>gb|M64619.1|PEACAB66 Pea cab gene, complete cds Length = 1666 Score = 44.1 bits (22), Expect = 0.27 Identities = 43/50 (86%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggctctctgctgaccc 316 |||||||| || || ||||| |||||||| || || |||||||||||||| Sbjct: 935 gagttccccggtgactacggttgggacactgccggactctctgctgaccc 984
>gb|K02067.1|PEACAB80 Pea (P.sativum) gene AB80 encoding major light-harvesting chlorophyll a/b-binding protein (polypeptide 15) complex precursor, complete coding sequence Length = 1993 Score = 44.1 bits (22), Expect = 0.27 Identities = 43/50 (86%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggctctctgctgaccc 316 |||||||| || || ||||| |||||||| || || |||||||||||||| Sbjct: 1236 gagttccccggtgactacggttgggacactgccggactctctgctgaccc 1285
>gb|M23531.1|DUNCBP D.salina major chlorophyll binding protein mRNA, complete cds Length = 1240 Score = 44.1 bits (22), Expect = 0.27 Identities = 46/54 (85%) Strand = Plus / Plus Query: 263 cggcgagttcccgggcgattacggctgggacaccgcggggctctctgctgaccc 316 |||||||||||| || || ||||||||||| ||||| || || || |||||||| Sbjct: 401 cggcgagttccccggtgactacggctgggataccgctggcctgtccgctgaccc 454
>dbj|AB026686.1| Physcomitrella patens mRNA for chlorophyll a/b-binding protein precursor, complete cds Length = 964 Score = 44.1 bits (22), Expect = 0.27 Identities = 37/42 (88%) Strand = Plus / Plus Query: 254 ctacctcagcggcgagttcccgggcgattacggctgggacac 295 |||||||| ||| |||||| | || ||||||||||||||||| Sbjct: 249 ctacctcaacggtgagttcgctggtgattacggctgggacac 290
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 ccccgaccgcgtgctctacctcggc 230 ||||||||||||| ||||||||||| Sbjct: 436200 ccccgaccgcgtgatctacctcggc 436176
>gb|AC006435.7|AC006435 Homo sapiens chromosome 17, clone RP5-59D14, complete sequence Length = 139267 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ctctcctcccccgcgatgaagctcg 117 ||||||||||||| ||||||||||| Sbjct: 38496 ctctcctcccccgggatgaagctcg 38472
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 181 ccacctccagcagcccgtggtacggccccgaccgcgt 217 ||||||| |||||||||||||||| ||| ||||||| Sbjct: 16289621 ccacctctggcagcccgtggtacggacccaaccgcgt 16289585
>dbj|AP004742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026F02 Length = 132237 Score = 42.1 bits (21), Expect = 1.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 181 ccacctccagcagcccgtggtacggccccgaccgcgt 217 ||||||| |||||||||||||||| ||| ||||||| Sbjct: 114513 ccacctctggcagcccgtggtacggacccaaccgcgt 114477
>gb|AF162200.1|AF162200 Lactuca sativa light-harvesting chlorophyll a/b binding protein mRNA, complete sequence; nuclear gene for chloroplast product Length = 643 Score = 42.1 bits (21), Expect = 1.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 269 gttcccgggcgattacggctgggacaccgcggggctctctgctga 313 |||||| || || ||||| |||||||| || |||||||||||||| Sbjct: 47 gttccccggtgactacggttgggacactgctgggctctctgctga 91
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 267 gagttcccgggcgattacggctgggacaccgcggggctctctgctgacccgga 319 ||||||||||| || ||| | |||||||| |||||||| || || |||||||| Sbjct: 259 gagttcccgggagactacaggtgggacacggcggggctatcggccgacccgga 311
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 cctcggcggcggccgcatcac 154 ||||||||||||||||||||| Sbjct: 4204589 cctcggcggcggccgcatcac 4204609
>ref|NM_124807.2| Arabidopsis thaliana LHCB3 (LIGHT-HARVESTING CHLOROPHYLL BINDING PROTEIN 3) AT5G54270 (LHCB3) mRNA, complete cds Length = 1078 Score = 40.1 bits (20), Expect = 4.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgc 298 ||||||| ||| || ||||| |||||||| || ||||||||||| Sbjct: 291 tacctcaccggagaattccctggcgattatggttgggacaccgc 334
>ref|NM_124808.3| Arabidopsis thaliana ATM2 (ARABIDOPSIS THALIANA MYOSIN 4) AT5G54280 (ATM2) mRNA, complete cds Length = 4559 Score = 40.1 bits (20), Expect = 4.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 255 tacctcagcggcgagttcccgggcgattacggctgggacaccgc 298 ||||||| ||| || ||||| |||||||| || ||||||||||| Sbjct: 4199 tacctcaccggagaattccctggcgattatggttgggacaccgc 4156
>ref|NM_187740.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2655 Score = 40.1 bits (20), Expect = 4.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 190 gcagcccgtggtacggccccgaccgcgt 217 |||||||||||||||| ||| ||||||| Sbjct: 419 gcagcccgtggtacggacccaaccgcgt 392
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cagtcgcagcagcagccgca 34 |||||||||||||||||||| Sbjct: 68856 cagtcgcagcagcagccgca 68837
>ref|XM_976294.1| PREDICTED: Mus musculus similar to zinc finger and BTB domain containing 10 (LOC669642), mRNA Length = 7573 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 1013 acgtcctcggcggcggccgc 994
>ref|XM_485202.4| PREDICTED: Mus musculus zinc finger and BTB domain containing 10, transcript variant 1 (Zbtb10), mRNA Length = 7702 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 1070 acgtcctcggcggcggccgc 1051
>ref|XM_979038.1| PREDICTED: Mus musculus zinc finger and BTB domain containing 10 (Zbtb10), mRNA Length = 6568 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 29 acgtcctcggcggcggccgc 10
>ref|XM_799661.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053505229.20) partial mRNA Length = 1686 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 acgaccatggcgctctcctc 100 |||||||||||||||||||| Sbjct: 473 acgaccatggcgctctcctc 454
>ref|XM_805848.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510823.20) partial mRNA Length = 1659 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 acgaccatggcgctctcctc 100 |||||||||||||||||||| Sbjct: 467 acgaccatggcgctctcctc 448
>ref|XM_845200.1| PREDICTED: Canis familiaris similar to calmodulin-binding transcription activator 1 (LOC608237), mRNA Length = 7849 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 cgtcctcggcggcggccgca 150 |||||||||||||||||||| Sbjct: 1214 cgtcctcggcggcggccgca 1233
>gb|AC005482.2| Homo sapiens PAC clone RP4-736H5 from 7, complete sequence Length = 148656 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gctgccacctccagcagccc 196 |||||||||||||||||||| Sbjct: 72320 gctgccacctccagcagccc 72339
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 accgcggccaaggctgccac 184 |||||||||||||||||||| Sbjct: 863107 accgcggccaaggctgccac 863088 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,448,579 Number of Sequences: 3902068 Number of extensions: 2448579 Number of successful extensions: 51183 Number of sequences better than 10.0: 277 Number of HSP's better than 10.0 without gapping: 282 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 49714 Number of HSP's gapped (non-prelim): 1452 length of query: 319 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 297 effective length of database: 17,147,199,772 effective search space: 5092718332284 effective search space used: 5092718332284 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)