ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet72h11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_466744.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1574 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 733 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 792 Query: 462 tca 464 ||| Sbjct: 793 tca 795
>ref|XM_466743.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1371 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 745 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 804 Query: 462 tca 464 ||| Sbjct: 805 tca 807
>ref|XM_507509.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1586 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 745 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 804 Query: 462 tca 464 ||| Sbjct: 805 tca 807
>ref|XM_507508.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1631 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 746 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 805 Query: 462 tca 464 ||| Sbjct: 806 tca 808
>ref|XM_507507.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>ref|XM_507506.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>ref|XM_507505.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>ref|XM_507504.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>ref|XM_507503.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>ref|XM_507502.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>ref|XM_507501.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>ref|XM_507500.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>ref|XM_507499.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>ref|XM_507498.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1592 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>ref|XM_507497.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1624 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>ref|XM_506867.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1590 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 752 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 811 Query: 462 tca 464 ||| Sbjct: 812 tca 814
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 24392949 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 24393008 Query: 462 tca 464 ||| Sbjct: 24393009 tca 24393011
>dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1792_D02 Length = 141649 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 21155 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 21214 Query: 462 tca 464 ||| Sbjct: 21215 tca 21217
>dbj|AK109334.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B09, full insert sequence Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>dbj|AK105020.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A05, full insert sequence Length = 1329 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 488 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 547 Query: 462 tca 464 ||| Sbjct: 548 tca 550
>dbj|AK119668.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-H04, full insert sequence Length = 1631 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 746 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 805 Query: 462 tca 464 ||| Sbjct: 806 tca 808
>dbj|AK106124.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F02, full insert sequence Length = 1586 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 745 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 804 Query: 462 tca 464 ||| Sbjct: 805 tca 807
>dbj|AK106204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-F12, full insert sequence Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>dbj|AK104569.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G04, full insert sequence Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>dbj|AK104563.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D08, full insert sequence Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>dbj|AK104662.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E08, full insert sequence Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>dbj|AK104643.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G04, full insert sequence Length = 975 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 134 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 193 Query: 462 tca 464 ||| Sbjct: 194 tca 196
>dbj|AK104632.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C05, full insert sequence Length = 1624 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>dbj|AK104607.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B08, full insert sequence Length = 1016 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 151 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 210 Query: 462 tca 464 ||| Sbjct: 211 tca 213
>dbj|AK104455.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A09, full insert sequence Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>dbj|AK104383.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-C11, full insert sequence Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>dbj|AK104310.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H06, full insert sequence Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>dbj|AK104307.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-E07, full insert sequence Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>dbj|AK104284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-A03, full insert sequence Length = 1574 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 733 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 792 Query: 462 tca 464 ||| Sbjct: 793 tca 795
>dbj|AK103939.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G07, full insert sequence Length = 1589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 748 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 807 Query: 462 tca 464 ||| Sbjct: 808 tca 810
>dbj|AK064829.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F09, full insert sequence Length = 1591 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 753 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 812 Query: 462 tca 464 ||| Sbjct: 813 tca 815
>dbj|AK061687.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B02, full insert sequence Length = 1323 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 482 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 541 Query: 462 tca 464 ||| Sbjct: 542 tca 544
>dbj|AK060972.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D12, full insert sequence Length = 1371 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 745 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 804 Query: 462 tca 464 ||| Sbjct: 805 tca 807
>dbj|AK059998.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G05, full insert sequence Length = 1043 Score = 61.9 bits (31), Expect = 2e-06 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 403 ttctccaagttgaggtacctcgccctcgccaac-acaagctcaccgggccaatcccgcca 461 ||||||||||| || ||||| |||||||||||| ||| ||||||||| ||||||||||| Sbjct: 160 ttctccaagttaagctacctggccctcgccaacaacaggctcaccggcgcaatcccgcca 219 Query: 462 tca 464 ||| Sbjct: 220 tca 222
>gb|AY107303.1| Zea mays PCO142509 mRNA sequence Length = 946 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/46 (91%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 413 tgaggtacctcgccctcgccaaca-caagctcaccgggccaatccc 457 |||| ||||| ||||||||||||| ||| ||||||||||||||||| Sbjct: 106 tgagctaccttgccctcgccaacaacaaactcaccgggccaatccc 151
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 tggcggttgatttcaatgattt 74 |||||||||||||||||||||| Sbjct: 297379 tggcggttgatttcaatgattt 297400
>gb|AC138300.8| Mus musculus chromosome 14, clone RP23-187B20, complete sequence Length = 213955 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 caggcttccaccaataatttt 156 ||||||||||||||||||||| Sbjct: 53409 caggcttccaccaataatttt 53389
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 tgaggtacctcgccctcgcca 433 ||||||||||||||||||||| Sbjct: 1133486 tgaggtacctcgccctcgcca 1133506
>ref|XM_566764.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNA04220) partial mRNA Length = 3229 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 tgaggtacctcgccctcgcca 433 ||||||||||||||||||||| Sbjct: 1332 tgaggtacctcgccctcgcca 1312
>dbj|AK089822.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830028O20 product:unclassifiable, full insert sequence Length = 2994 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 caggcttccaccaataatttt 156 ||||||||||||||||||||| Sbjct: 1218 caggcttccaccaataatttt 1198
>gb|AY107552.1| Zea mays PCO099852 mRNA sequence Length = 837 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 attgacattggtgaaccagaa 300 ||||||||||||||||||||| Sbjct: 633 attgacattggtgaaccagaa 653
>ref|NM_020506.1| Mus musculus exportin 4 (Xpo4), mRNA Length = 3456 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 ggtacctcgccctcgccaac 435 |||||||||||||||||||| Sbjct: 674 ggtacctcgccctcgccaac 693
>gb|AC154504.2| Mus musculus BAC clone RP24-92H14 from chromosome 14, complete sequence Length = 234665 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 ggtacctcgccctcgccaac 435 |||||||||||||||||||| Sbjct: 160586 ggtacctcgccctcgccaac 160605
>gb|AF390899.1|AF390897S3 Mus musculus germ cell nuclear factor (Nr6a1) gene, exons 4 and 5 Length = 12221 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 cccctcagcagccttcacta 191 |||||||||||||||||||| Sbjct: 12074 cccctcagcagccttcacta 12055
>dbj|AK084907.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430008F02 product:exportin 4, full insert sequence Length = 2317 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 ggtacctcgccctcgccaac 435 |||||||||||||||||||| Sbjct: 859 ggtacctcgccctcgccaac 878
>gb|AC007301.8|AC007301 Drosophila melanogaster, chromosome 2R, region 43E12-44F1, BAC clone BACR04B09, complete sequence Length = 174707 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tgtgctttttcaggcttcca 145 |||||||||||||||||||| Sbjct: 125224 tgtgctttttcaggcttcca 125243
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gctggaaggcttcatcgatc 112 |||||||||||||||||||| Sbjct: 2851268 gctggaaggcttcatcgatc 2851287
>gb|AF145021.1|AF145021 Mus musculus exportin 4 mRNA, complete cds Length = 3456 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 ggtacctcgccctcgccaac 435 |||||||||||||||||||| Sbjct: 674 ggtacctcgccctcgccaac 693
>emb|AL844842.29| Mouse DNA sequence from clone RP23-354G20 on chromosome 2, complete sequence Length = 228433 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cccctcagcagccttcacta 191 |||||||||||||||||||| Sbjct: 165125 cccctcagcagccttcacta 165144
>dbj|AK129430.1| Mus musculus mRNA for mKIAA1721 protein Length = 4723 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 ggtacctcgccctcgccaac 435 |||||||||||||||||||| Sbjct: 669 ggtacctcgccctcgccaac 688
>gb|AC122205.6| Mus musculus BAC clone RP23-76C13 from chromosome 8, complete sequence Length = 249808 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cctgcagacttgggcttctc 407 |||||||||||||||||||| Sbjct: 241885 cctgcagacttgggcttctc 241866
>gb|AE003840.3| Drosophila melanogaster chromosome 2R, section 10 of 73 of the complete sequence Length = 272100 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tgtgctttttcaggcttcca 145 |||||||||||||||||||| Sbjct: 230059 tgtgctttttcaggcttcca 230040
>gb|AC004283.1|AC004283 Drosophila melanogaster DNA sequence (P1 DS05557 (D152)), complete sequence Length = 80095 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tgtgctttttcaggcttcca 145 |||||||||||||||||||| Sbjct: 12689 tgtgctttttcaggcttcca 12708
>dbj|AP004500.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT05P21, TM0032, complete sequence Length = 106632 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 ctcaccgggccaatcccgcc 460 |||||||||||||||||||| Sbjct: 72662 ctcaccgggccaatcccgcc 72681 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,596,276 Number of Sequences: 3902068 Number of extensions: 3596276 Number of successful extensions: 59735 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 59487 Number of HSP's gapped (non-prelim): 209 length of query: 470 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 448 effective length of database: 17,147,199,772 effective search space: 7681945497856 effective search space used: 7681945497856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
