ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet72h09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla... 106 2e-23
2CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla... 50 2e-06
3CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast... 49 4e-06
4CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo... 46 5e-05
5CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29 42 9e-04
6CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo... 41 0.001
7CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch... 40 0.003
8CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl... 39 0.007
9CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop... 39 0.007
10CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo... 38 0.010
11CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla... 38 0.010
12CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch... 37 0.016
13CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla... 37 0.028
14CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty... 36 0.036
15CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl... 36 0.047
16CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type... 35 0.11
17CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ... 34 0.14
18CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl... 34 0.14
19CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast... 34 0.14
20CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl... 34 0.14
21CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla... 34 0.14
22CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla... 34 0.14
23CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl... 34 0.14
24CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe... 34 0.14
25CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl... 34 0.14
26CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ... 34 0.14
27CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast... 34 0.14
28CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl... 34 0.14
29CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast... 34 0.14
30CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast... 34 0.14
31LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre... 34 0.18
32CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast... 34 0.18
33CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla... 33 0.24
34CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla... 33 0.31
35CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla... 33 0.31
36CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type... 33 0.31
37CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl... 33 0.31
38CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl... 33 0.31
39CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl... 33 0.31
40CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla... 33 0.31
41CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl... 33 0.31
42CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla... 33 0.31
43CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl... 33 0.31
44LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre... 32 0.52
45CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop... 32 0.52
46CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast... 32 0.68
47CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe... 32 0.68
48CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla... 32 0.68
49CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop... 32 0.68
50MOD5_HUMAN (Q9H3H1) tRNA isopentenyltransferase, mitochondrial p... 32 0.68
51CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl... 32 0.68
52CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl... 32 0.89
53CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla... 32 0.89
54FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ... 32 0.89
55CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ... 31 1.2
56CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast... 31 1.2
57CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast... 31 1.2
58CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla... 31 1.2
59CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla... 31 1.2
60CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type... 31 1.2
61CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ... 31 1.2
62CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl... 31 1.2
63CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe... 31 1.2
64CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop... 31 1.2
65CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla... 31 1.2
66CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl... 30 2.0
67CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl... 30 2.6
68CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ... 30 3.4
69CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro... 29 4.4
70SYE1_WOLPM (Q73HV5) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Gl... 29 4.4
71SPRT_VIBVY (Q7MHK4) Protein sprT 29 4.4
72SPRT_VIBVU (Q8DCA5) Protein sprT 29 4.4
73CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop... 29 5.8
74OMPY_CHLPN (Q9Z6M5) Putative outer membrane protein CPn_1034/CP0... 29 5.8
75CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop... 29 5.8
76CBID_METCH (Q9X7G7) Putative cobalt-precorrin-6A synthase [deace... 28 7.6
77MEDEA_ARATH (O65312) Polycomb group protein MEDEA (Maternal embr... 28 9.9
78CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo... 28 9.9 
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score =  106 bits (265), Expect = 2e-23
 Identities = 49/56 (87%), Positives = 52/56 (92%)
 Frame = +3

Query: 270 FVVRASSSPPAKQNDNRQLWFASKQSLAYLDGTLPGDFGFDPLGLSDPEGTGGFIE 437
           FVVRA+S+PP KQ  NRQLWFASKQSL+YLDG LPGDFGFDPLGLSDPEGTGGFIE
Sbjct: 37  FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIE 92
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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
 Frame = +3

Query: 279 RASSSPPAKQNDNRQLWFASKQSLAYLDGTLPGDFGFDPLGL-SDPE 416
           R++++     + +R LWF       +LDG+LPGDFGFDPLGL SDPE
Sbjct: 52  RSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPE 98
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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 23/35 (65%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
 Frame = +3

Query: 315 NRQLWFASKQSLAYLDGTLPGDFGFDPLGL-SDPE 416
           +R LWF       +LDG+LPGDFGFDPLGL SDPE
Sbjct: 64  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPE 98
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>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = +3

Query: 315 NRQLWFASKQSLAYLDGTLPGDFGFDPLGLSDP 413
           +R LWF   +S  YLDG+L GD+GFDP GL  P
Sbjct: 51  DRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKP 83
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>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 41.6 bits (96), Expect = 9e-04
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = +3

Query: 324 LWFASKQSLAYLDGTLPGDFGFDPLGLSDP 413
           LW  +     +LDG+LPGD GFDPLGLS P
Sbjct: 51  LWLPNTTRPEWLDGSLPGDRGFDPLGLSKP 80
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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = +3

Query: 315 NRQLWFASKQSLAYLDGTLPGDFGFDPLGLSDP 413
           +R LW+    S  +LDG+L GD+GFDP GL  P
Sbjct: 54  DRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKP 86
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>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
 Frame = +3

Query: 270 FVVRASSSPPAKQNDNRQLWFASKQSLA------YLDGTLPGDFGFDPLGL-SDP 413
           FVV A++  P K       W  + +S        +LDG+LPGDFGFDPLGL  DP
Sbjct: 42  FVVAAAAVAPKKS------WIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDP 90
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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +3

Query: 327 WFASKQSLAYLDGTLPGDFGFDPLGLSD 410
           W   +   +YLDG+ PGDFGFD LGL +
Sbjct: 49  WMPGQPRPSYLDGSAPGDFGFDSLGLGE 76
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>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 17/21 (80%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
 Frame = +3

Query: 354 YLDGTLPGDFGFDPLGL-SDP 413
           +LDG+LPGDFGFDPLGL  DP
Sbjct: 75  WLDGSLPGDFGFDPLGLGKDP 95
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>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = +3

Query: 270 FVVRASSSPPAK----QND-NRQLWFASKQSLAYLDGTLPGDFGFDPLGLSDP 413
           F  +  + PP K    Q+D +R +WF       +LDG++ GD GFDP GL  P
Sbjct: 35  FGKKKPAPPPKKSRQVQDDGDRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKP 87
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>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 327 WFASKQSLAYLDGTLPGDFGFDPLGLS-DPEGTGGFIE 437
           W     S  YL G+L GD GFDPLGL+ DPE    F++
Sbjct: 57  WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQ 94
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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 16/21 (76%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
 Frame = +3

Query: 354 YLDGTLPGDFGFDPLGL-SDP 413
           +LDG+LPGD+GFDPLGL  DP
Sbjct: 70  WLDGSLPGDYGFDPLGLGKDP 90
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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 36.6 bits (83), Expect = 0.028
 Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +3

Query: 282 ASSSPPAKQNDNRQLWFASKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           +SSSP    N  + L   S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 46  SSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 91
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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 36.2 bits (82), Expect = 0.036
 Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = +3

Query: 276 VRASSSPPAKQNDNRQLWFASKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           V +SSSP    +  + L   S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 5   VASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 52
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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 35.8 bits (81), Expect = 0.047
 Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +3

Query: 282 ASSSPPAKQNDNRQLWFASKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           ASSSP    +  + L   S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 44  ASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 89
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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
 Frame = +3

Query: 315 NRQLW---FASKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           NR  W   ++   + AYL G  PGD+G+D  GLS DPE
Sbjct: 40  NRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPE 77
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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S+Q+ +YL G  PGD+G+D  GLS DPE
Sbjct: 61  SEQTPSYLTGEFPGDYGWDTAGLSADPE 88
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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +3

Query: 285 SSSPPAKQNDNRQLWFASKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           SSSP    +  + L   S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 45  SSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 89
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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +3

Query: 276 VRASSSPPAKQNDNRQLWFASKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           V +S SP    +  + L   S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 45  VASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 92
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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S+Q+ +YL G  PGD+G+D  GLS DPE
Sbjct: 62  SEQTPSYLTGEFPGDYGWDTAGLSADPE 89
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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S+Q+ +YL G  PGD+G+D  GLS DPE
Sbjct: 34  SEQTPSYLTGEFPGDYGWDTAGLSADPE 61
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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S+Q+ +YL G  PGD+G+D  GLS DPE
Sbjct: 62  SEQTPSYLTGEFPGDYGWDTAGLSADPE 89
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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S+Q+ +YL G  PGD+G+D  GLS DPE
Sbjct: 62  SEQTPSYLTGEFPGDYGWDTAGLSADPE 89
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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 11/57 (19%)
 Frame = +3

Query: 279 RASSSPPAKQNDNRQLWFASKQSL----------AYLDGTLPGDFGFDPLGLS-DPE 416
           R     P  +  +  +W+ S + L          +YL G  PGD+G+D  GLS DPE
Sbjct: 33  RVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPE 89
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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S Q+ +YL+G  PGD+G+D  GLS DPE
Sbjct: 60  SAQTPSYLNGEFPGDYGWDTAGLSADPE 87
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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S Q+ +YL+G  PGD+G+D  GLS DPE
Sbjct: 63  SAQTPSYLNGEFPGDYGWDTAGLSADPE 90
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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S+Q+ +YL G  PGD+G+D  GLS DPE
Sbjct: 60  SEQTPSYLTGEFPGDYGWDTAGLSADPE 87
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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +3

Query: 276 VRASSSPPAKQNDNRQLWFASKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           V +S SP    +  + L   S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 46  VASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 93
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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S+Q+ +YL G  PGD+G+D  GLS DPE
Sbjct: 61  SEQTPSYLTGEFPGDYGWDTAGLSADPE 88
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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +3

Query: 285 SSSPPAKQNDNRQLWFASKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           SSSP    +  + L   S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 47  SSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 91
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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 312 DNRQLWFASKQSLAYLDGTLPGDFGFDPLGL-SDP 413
           + R+LWF +     YL G   GD GFDP GL +DP
Sbjct: 369 EERELWFPNIVPPRYLTGEAYGDKGFDPAGLAADP 403



 Score = 33.5 bits (75), Expect = 0.24
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +3

Query: 324 LWFASKQSLAYLDGTLPGDFGFDPLGL-SDPE 416
           LWF + +  A L G  P D GFDPL L +DP+
Sbjct: 189 LWFPNAEPPALLTGEYPADRGFDPLNLAADPD 220



 Score = 32.3 bits (72), Expect = 0.52
 Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = +3

Query: 324 LWFASKQSLAYLDGTLPGDFGFDPLGL-SDPE 416
           LWF +  + ++L+G   GD GFDP GL +DP+
Sbjct: 4   LWFPNTLAPSWLNGEYYGDRGFDPAGLAADPD 35
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>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
 Frame = +3

Query: 300 AKQNDNRQLWFASKQSL----------AYLDGTLPGDFGFDPLGLS-DPE 416
           AKQ  +   W+ S + L          +YL G  PGD+G+D  GLS DPE
Sbjct: 41  AKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 90
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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +3

Query: 276 VRASSSPPAKQNDNRQLWFASKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           V AS SP    +  + L   S +  +YL G  PGD+G+D  GLS DPE
Sbjct: 39  VAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 86
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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 61  SGESPSYLTGEFPGDYGWDTAGLSADPE 88
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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S+Q  +YL G  PGD+G+D  GLS DPE
Sbjct: 62  SEQIPSYLTGEFPGDYGWDTAGLSADPE 89
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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = +3

Query: 315 NRQLWFA--SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           +R  W    S  + AYL G  PGD+G+D  GLS DPE
Sbjct: 43  DRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPE 79
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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 64  SGESPSYLTGEFPGDYGWDTAGLSADPE 91
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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 64  SGESPSYLTGEFPGDYGWDTAGLSADPE 91
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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 64  SGESPSYLTGEFPGDYGWDTAGLSADPE 91
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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 63  SGESPSYLTGEFPGDYGWDTAGLSADPE 90
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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 63  SGESPSYLTGEFPGDYGWDTAGLSADPE 90
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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 63  SGESPSYLTGEFPGDYGWDTAGLSADPE 90
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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 63  SGESPSYLTGEFPGDYGWDTAGLSADPE 90
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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 324 LWFASKQSLAYLDGTLPGDFGFDPLGL-SDP 413
           +WF   Q  A+L G  P D GFDPL + +DP
Sbjct: 161 VWFPGAQPPAHLTGEYPADRGFDPLSVAADP 191
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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S Q  +YL G  PGD+G+D  GLS DPE
Sbjct: 62  SDQIPSYLTGEFPGDYGWDTAGLSADPE 89
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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S ++ +YL G  PGD+G+D  GLS DPE
Sbjct: 61  SGEAPSYLTGEFPGDYGWDTAGLSADPE 88
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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +3

Query: 282 ASSSPPAKQNDNRQLWFA--SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           AS+S       +R L+    S +  +YL G  PGD+G+D  GLS DPE
Sbjct: 51  ASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 98
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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S ++ +YL G  PGD+G+D  GLS DPE
Sbjct: 64  SGEAPSYLTGEFPGDYGWDTAGLSADPE 91
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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S ++ +YL G  PGD+G+D  GLS DPE
Sbjct: 64  SGEAPSYLTGEFPGDYGWDTAGLSADPE 91
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>MOD5_HUMAN (Q9H3H1) tRNA isopentenyltransferase, mitochondrial precursor (EC|
           2.5.1.8) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPP transferase) (IPTase)
           (IPPT) (hGRO1)
          Length = 467

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 386 AKVTRQRAVEVGEGLLGREPQLPVVILLG-RGAGR 285
           A V   RAV VG GL G +  LP+V++LG  G G+
Sbjct: 2   ASVAAARAVPVGSGLRGLQRTLPLVVILGATGTGK 36
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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S ++ +YL G  PGD+G+D  GLS DPE
Sbjct: 63  SGEAPSYLTGEFPGDYGWDTAGLSADPE 90
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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +3

Query: 282 ASSSPPAKQNDNRQLWFA--SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           A+SS       +R L+    S +  +YL G  PGD+G+D  GLS DPE
Sbjct: 42  AASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 89
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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 11/58 (18%)
 Frame = +3

Query: 276 VRASSSPPAKQNDNRQLWFASKQSL----------AYLDGTLPGDFGFDPLGLS-DPE 416
           +R +++ P     +   W+ + + L          +YL G  PGD+G+D  GLS DPE
Sbjct: 32  MRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 89
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>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = +3

Query: 339 KQSLAYLDGTLPGDFGFDPLGL--SDPE 416
           K   A  +G  PGD GFDPLGL  SDP+
Sbjct: 138 KADSALREGYEPGDLGFDPLGLAPSDPD 165
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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +3

Query: 351 AYLDGTLPGDFGFDPLGLS-DPE 416
           +YL G  PGD+G+D  GLS DPE
Sbjct: 8   SYLTGEFPGDYGWDTAGLSADPE 30
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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +3

Query: 351 AYLDGTLPGDFGFDPLGLS-DPE 416
           +YL G  PGD+G+D  GLS DPE
Sbjct: 47  SYLTGEFPGDYGWDTAGLSADPE 69
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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +3

Query: 351 AYLDGTLPGDFGFDPLGLS-DPE 416
           +YL G  PGD+G+D  GLS DPE
Sbjct: 67  SYLTGEFPGDYGWDTAGLSADPE 89
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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +3

Query: 351 AYLDGTLPGDFGFDPLGLS-DPE 416
           +YL G  PGD+G+D  GLS DPE
Sbjct: 65  SYLTGEFPGDYGWDTAGLSADPE 87
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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +3

Query: 351 AYLDGTLPGDFGFDPLGLS-DPE 416
           +YL G  PGD+G+D  GLS DPE
Sbjct: 63  SYLTGEFPGDYGWDTAGLSADPE 85
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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 330 FASKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           F+   +  YL G  PGD+G+D  GLS DP+
Sbjct: 45  FSENDTPEYLTGEFPGDYGWDTAGLSADPQ 74
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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +3

Query: 351 AYLDGTLPGDFGFDPLGLS-DPE 416
           +YL G  PGD+G+D  GLS DPE
Sbjct: 57  SYLTGEFPGDYGWDTAGLSADPE 79
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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +3

Query: 351 AYLDGTLPGDFGFDPLGLS-DPE 416
           +YL G  PGD+G+D  GLS DPE
Sbjct: 80  SYLTGEFPGDYGWDTAGLSADPE 102
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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +3

Query: 351 AYLDGTLPGDFGFDPLGLS-DPE 416
           +YL G  PGD+G+D  GLS DPE
Sbjct: 80  SYLTGEFPGDYGWDTAGLSADPE 102
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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +3

Query: 282 ASSSPPAKQNDNRQLWFASKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           +SSSP    +  + L   S ++ +YL G  P D+G+D  GLS DPE
Sbjct: 46  SSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPE 91
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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +3

Query: 351 AYLDGTLPGDFGFDPLGLS-DPE 416
           +YL G  PGD+G+D  GLS DPE
Sbjct: 67  SYLTGEFPGDYGWDTAGLSADPE 89
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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +3

Query: 351 AYLDGTLPGDFGFDPLGLS-DPE 416
           +YL G  PGD+G+D  GLS DPE
Sbjct: 66  SYLTGEFPGDYGWDTEGLSADPE 88
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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DP 413
           S ++ +YL G  PGD+G+D  GLS DP
Sbjct: 63  SGEAPSYLTGEFPGDYGWDTAGLSADP 89
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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGL-SDPE 416
           S ++ +YL+G   GD+G+D  GL SDPE
Sbjct: 65  SGETPSYLNGEFAGDYGWDTAGLSSDPE 92
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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +3

Query: 354 YLDGTLPGDFGFDPLGL 404
           YL+G + GD+G+DP GL
Sbjct: 84  YLNGEVAGDYGYDPFGL 100
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>SYE1_WOLPM (Q73HV5) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Glutamate--tRNA|
           ligase 1) (GluRS 1)
          Length = 473

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -1

Query: 289 DDALTTKGDFREEDDLEKEDCRGLPSSCLPERRPW 185
           D+    K   REE  + K  C   P SC P  R W
Sbjct: 104 DEVAEKKAKAREEGKIYKHKCTTKPPSCHPSSRHW 138
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>SPRT_VIBVY (Q7MHK4) Protein sprT|
          Length = 168

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -2

Query: 108 EMKKFTQADILASASSTPAFAVASL*GGTLPYRC 7
           E +   Q   L  A++T  FAVAS+ G T  YRC
Sbjct: 96  EWQSIMQGVFLLPANTTHQFAVASVQGKTFQYRC 129
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>SPRT_VIBVU (Q8DCA5) Protein sprT|
          Length = 168

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -2

Query: 108 EMKKFTQADILASASSTPAFAVASL*GGTLPYRC 7
           E +   Q   L  A++T  FAVAS+ G T  YRC
Sbjct: 96  EWQSIMQGVFLLPANTTHQFAVASVQGKTFQYRC 129
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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 351 AYLDGTLPGDFGFDPLGLS 407
           +YL G  PGD+G+D  GLS
Sbjct: 71  SYLTGEFPGDYGWDTAGLS 89
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>OMPY_CHLPN (Q9Z6M5) Putative outer membrane protein|
           CPn_1034/CP0818/CPj1034/CpB1074 precursor
          Length = 262

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -1

Query: 313 SFCLAGGLDDALTTKGDFREEDDLEKEDCRGLPSSCLPERRPWAAIVP 170
           +F L   LDD L   G+       + +  +GL     PE+  W A+VP
Sbjct: 41  NFWLILDLDDTLLQGGEALSHSIWKSKAIQGLQKQGTPEQEAWEAVVP 88
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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S ++ +YL G  PGD+G+D   LS DPE
Sbjct: 64  SGEAPSYLTGEFPGDYGWDTAELSADPE 91
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>CBID_METCH (Q9X7G7) Putative cobalt-precorrin-6A synthase [deacetylating] (EC|
           2.1.1.-)
          Length = 361

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = -3

Query: 437 LDEPAGALRVGQPQGVEAKVTRQRAVEVGEGLLGREPQLPVVILLGRGA 291
           ++   GALR G   G  A    + A E    LLG EP+ PV + L  GA
Sbjct: 1   MNSETGALRRGWTTGTCASAAARAAFEA---LLGIEPEDPVPVTLPSGA 46
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>MEDEA_ARATH (O65312) Polycomb group protein MEDEA (Maternal embryogenesis|
           control protein) (Protein FERTILIZATION-INDEPENDENT
           SEED1) (Protein SET DOMAIN GROUP 5)
          Length = 689

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 33  RGKQPRKRGSTKRKRECR 86
           RG++PRK G++KR +E R
Sbjct: 669 RGREPRKTGASKRSKEAR 686
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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 SKQSLAYLDGTLPGDFGFDPLGLS-DPE 416
           S+ + +YL G  PGD+G+D   +S DPE
Sbjct: 63  SEGTPSYLTGEFPGDYGWDTAAVSADPE 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,322,042
Number of Sequences: 219361
Number of extensions: 773523
Number of successful extensions: 2356
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 2306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2356
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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