| Clone Name | baet72g02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009268.1| Triticum aestivum clone wlk8.pk0002.f4:fis, full insert mRNA sequence Length = 1919 Score = 686 bits (346), Expect = 0.0 Identities = 434/458 (94%), Gaps = 4/458 (0%) Strand = Plus / Plus Query: 1 tacatcgggagtattgtgccgcccggtgacaattactacgccgcgctcaattctgccgtc 60 ||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 728 tacatcgggagcatcgtgccgcccggtgacaattactatgccgcgctcaattcagccgtg 787 Query: 61 ttcagtgacggatccttctgctacgtgcccaaggacacggtctgccccatggagatatct 120 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 788 ttcagtgacggatccttctgctacgtgcccaaggatacggtctgccccatggagatatca 847 Query: 121 acctacttcagaatcaatgataaggagaccgggcagttcgagaggactctgattgtggct 180 ||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||| Sbjct: 848 acctacttcagaatcaacgacaaggagaccgggcagtttgagaggactctgattgtggct 907 Query: 181 gatgagaggagcacggttagctatttggaaggttgtactgctccagcatatgactccaac 240 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 908 gatgagaggagcacggttagctatttagaaggttgtacagctccagcatatgactccaac 967 Query: 241 cagctccatgccgcggtggtggagcttgtgtgcgaagagggggccgagattaagtactcc 300 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 968 cagctccacgccgcggtggtggagcttgtgtgcgaagaaggggccgagattaagtactcc 1027 Query: 301 accgtgcagaattggtatgctggtgatgagaagggcaaagggggcatttacaattttgtc 360 ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 1028 accgtgcagaattggtatgctggcgatgaggagggcaaagggggcatttacaattttgtg 1087 Query: 361 actaagagggggcgctgcaaggggcgtggctcg-aaatctcatggacacaggttgagaca 419 | ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1088 gccaagagggggcggtgcaaggggcgtggctcgaaaatctcatggacacaggttgagaca 1147 Query: 420 gggtcagc-atcacct-gaagtaccc-agtgtggagct 454 |||||||| ||||||| ||||||||| ||||||||||| Sbjct: 1148 gggtcagcaatcacctggaagtacccaagtgtggagct 1185
>ref|NM_190436.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1635 Score = 381 bits (192), Expect = e-102 Identities = 337/384 (87%), Gaps = 1/384 (0%) Strand = Plus / Plus Query: 46 ctcaattctgccgtcttcagtgacggatccttctgctacgtgcccaaggacacggtctgc 105 |||||||| ||||| ||||| || || || |||||||| ||||||||||| ||||| ||| Sbjct: 736 ctcaattcggccgtgttcagcgatgggtcgttctgctatgtgcccaaggatacggtttgc 795 Query: 106 cccatggagatatctacctacttcagaatcaatgataaggagaccgggcagttcgagagg 165 || ||||||||||| || ||||| || ||||| || |||||||||||||| || |||||| Sbjct: 796 ccaatggagatatcgacatactttaggatcaacgacaaggagaccgggcaatttgagagg 855 Query: 166 actctgattgtggctgatgagaggagcacggttagctatttggaaggttgtactgctcca 225 ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 856 actctaattgtggctgatgagaggagcacggttagctatctggaagggtgtactgctcca 915 Query: 226 gcatatgactccaaccagctccatgccgcggtggtggagcttgtgtgcgaagagggggcc 285 || ||||||||||||||||||||||| ||||| |||||||||||||| || ||| ||| Sbjct: 916 gcttatgactccaaccagctccatgcggcggttgtggagcttgtgtgtgaggagcaggca 975 Query: 286 gagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggc 345 ||||| |||||||| || |||||||||||||| ||||||||||| |||| || |||||| Sbjct: 976 gagatcaagtactctacggtgcagaattggtactctggtgatgaggaggggaaggggggc 1035 Query: 346 atttacaattttgtcactaagagggggcgctgcaaggggcgtggctcgaa-atctcatgg 404 |||||||| ||||| |||||||| || || ||||| ||||| ||||| || ||||||||| Sbjct: 1036 atttacaactttgttactaagagaggacggtgcaaagggcggggctctaagatctcatgg 1095 Query: 405 acacaggttgagacagggtcagca 428 ||||||||||||||||| |||||| Sbjct: 1096 acacaggttgagacaggttcagca 1119
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 381 bits (192), Expect = e-102 Identities = 337/384 (87%), Gaps = 1/384 (0%) Strand = Plus / Minus Query: 46 ctcaattctgccgtcttcagtgacggatccttctgctacgtgcccaaggacacggtctgc 105 |||||||| ||||| ||||| || || || |||||||| ||||||||||| ||||| ||| Sbjct: 35500999 ctcaattcggccgtgttcagcgatgggtcgttctgctatgtgcccaaggatacggtttgc 35500940 Query: 106 cccatggagatatctacctacttcagaatcaatgataaggagaccgggcagttcgagagg 165 || ||||||||||| || ||||| || ||||| || |||||||||||||| || |||||| Sbjct: 35500939 ccaatggagatatcgacatactttaggatcaacgacaaggagaccgggcaatttgagagg 35500880 Query: 166 actctgattgtggctgatgagaggagcacggttagctatttggaaggttgtactgctcca 225 ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 35500879 actctaattgtggctgatgagaggagcacggttagctatctggaagggtgtactgctcca 35500820 Query: 226 gcatatgactccaaccagctccatgccgcggtggtggagcttgtgtgcgaagagggggcc 285 || ||||||||||||||||||||||| ||||| |||||||||||||| || ||| ||| Sbjct: 35500819 gcttatgactccaaccagctccatgcggcggttgtggagcttgtgtgtgaggagcaggca 35500760 Query: 286 gagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggc 345 ||||| |||||||| || |||||||||||||| ||||||||||| |||| || |||||| Sbjct: 35500759 gagatcaagtactctacggtgcagaattggtactctggtgatgaggaggggaaggggggc 35500700 Query: 346 atttacaattttgtcactaagagggggcgctgcaaggggcgtggctcgaa-atctcatgg 404 |||||||| ||||| |||||||| || || ||||| ||||| ||||| || ||||||||| Sbjct: 35500699 atttacaactttgttactaagagaggacggtgcaaagggcggggctctaagatctcatgg 35500640 Query: 405 acacaggttgagacagggtcagca 428 ||||||||||||||||| |||||| Sbjct: 35500639 acacaggttgagacaggttcagca 35500616
>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446G04 Length = 143515 Score = 381 bits (192), Expect = e-102 Identities = 337/384 (87%), Gaps = 1/384 (0%) Strand = Plus / Minus Query: 46 ctcaattctgccgtcttcagtgacggatccttctgctacgtgcccaaggacacggtctgc 105 |||||||| ||||| ||||| || || || |||||||| ||||||||||| ||||| ||| Sbjct: 31186 ctcaattcggccgtgttcagcgatgggtcgttctgctatgtgcccaaggatacggtttgc 31127 Query: 106 cccatggagatatctacctacttcagaatcaatgataaggagaccgggcagttcgagagg 165 || ||||||||||| || ||||| || ||||| || |||||||||||||| || |||||| Sbjct: 31126 ccaatggagatatcgacatactttaggatcaacgacaaggagaccgggcaatttgagagg 31067 Query: 166 actctgattgtggctgatgagaggagcacggttagctatttggaaggttgtactgctcca 225 ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 31066 actctaattgtggctgatgagaggagcacggttagctatctggaagggtgtactgctcca 31007 Query: 226 gcatatgactccaaccagctccatgccgcggtggtggagcttgtgtgcgaagagggggcc 285 || ||||||||||||||||||||||| ||||| |||||||||||||| || ||| ||| Sbjct: 31006 gcttatgactccaaccagctccatgcggcggttgtggagcttgtgtgtgaggagcaggca 30947 Query: 286 gagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggc 345 ||||| |||||||| || |||||||||||||| ||||||||||| |||| || |||||| Sbjct: 30946 gagatcaagtactctacggtgcagaattggtactctggtgatgaggaggggaaggggggc 30887 Query: 346 atttacaattttgtcactaagagggggcgctgcaaggggcgtggctcgaa-atctcatgg 404 |||||||| ||||| |||||||| || || ||||| ||||| ||||| || ||||||||| Sbjct: 30886 atttacaactttgttactaagagaggacggtgcaaagggcggggctctaagatctcatgg 30827 Query: 405 acacaggttgagacagggtcagca 428 ||||||||||||||||| |||||| Sbjct: 30826 acacaggttgagacaggttcagca 30803
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088C09 Length = 154084 Score = 381 bits (192), Expect = e-102 Identities = 337/384 (87%), Gaps = 1/384 (0%) Strand = Plus / Minus Query: 46 ctcaattctgccgtcttcagtgacggatccttctgctacgtgcccaaggacacggtctgc 105 |||||||| ||||| ||||| || || || |||||||| ||||||||||| ||||| ||| Sbjct: 124948 ctcaattcggccgtgttcagcgatgggtcgttctgctatgtgcccaaggatacggtttgc 124889 Query: 106 cccatggagatatctacctacttcagaatcaatgataaggagaccgggcagttcgagagg 165 || ||||||||||| || ||||| || ||||| || |||||||||||||| || |||||| Sbjct: 124888 ccaatggagatatcgacatactttaggatcaacgacaaggagaccgggcaatttgagagg 124829 Query: 166 actctgattgtggctgatgagaggagcacggttagctatttggaaggttgtactgctcca 225 ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 124828 actctaattgtggctgatgagaggagcacggttagctatctggaagggtgtactgctcca 124769 Query: 226 gcatatgactccaaccagctccatgccgcggtggtggagcttgtgtgcgaagagggggcc 285 || ||||||||||||||||||||||| ||||| |||||||||||||| || ||| ||| Sbjct: 124768 gcttatgactccaaccagctccatgcggcggttgtggagcttgtgtgtgaggagcaggca 124709 Query: 286 gagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggc 345 ||||| |||||||| || |||||||||||||| ||||||||||| |||| || |||||| Sbjct: 124708 gagatcaagtactctacggtgcagaattggtactctggtgatgaggaggggaaggggggc 124649 Query: 346 atttacaattttgtcactaagagggggcgctgcaaggggcgtggctcgaa-atctcatgg 404 |||||||| ||||| |||||||| || || ||||| ||||| ||||| || ||||||||| Sbjct: 124648 atttacaactttgttactaagagaggacggtgcaaagggcggggctctaagatctcatgg 124589 Query: 405 acacaggttgagacagggtcagca 428 ||||||||||||||||| |||||| Sbjct: 124588 acacaggttgagacaggttcagca 124565
>dbj|AK121100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069G03, full insert sequence Length = 1978 Score = 381 bits (192), Expect = e-102 Identities = 337/384 (87%), Gaps = 1/384 (0%) Strand = Plus / Plus Query: 46 ctcaattctgccgtcttcagtgacggatccttctgctacgtgcccaaggacacggtctgc 105 |||||||| ||||| ||||| || || || |||||||| ||||||||||| ||||| ||| Sbjct: 782 ctcaattcggccgtgttcagcgatgggtcgttctgctatgtgcccaaggatacggtttgc 841 Query: 106 cccatggagatatctacctacttcagaatcaatgataaggagaccgggcagttcgagagg 165 || ||||||||||| || ||||| || ||||| || |||||||||||||| || |||||| Sbjct: 842 ccaatggagatatcgacatactttaggatcaacgacaaggagaccgggcaatttgagagg 901 Query: 166 actctgattgtggctgatgagaggagcacggttagctatttggaaggttgtactgctcca 225 ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 902 actctaattgtggctgatgagaggagcacggttagctatctggaagggtgtactgctcca 961 Query: 226 gcatatgactccaaccagctccatgccgcggtggtggagcttgtgtgcgaagagggggcc 285 || ||||||||||||||||||||||| ||||| |||||||||||||| || ||| ||| Sbjct: 962 gcttatgactccaaccagctccatgcggcggttgtggagcttgtgtgtgaggagcaggca 1021 Query: 286 gagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggc 345 ||||| |||||||| || |||||||||||||| ||||||||||| |||| || |||||| Sbjct: 1022 gagatcaagtactctacggtgcagaattggtactctggtgatgaggaggggaaggggggc 1081 Query: 346 atttacaattttgtcactaagagggggcgctgcaaggggcgtggctcgaa-atctcatgg 404 |||||||| ||||| |||||||| || || ||||| ||||| ||||| || ||||||||| Sbjct: 1082 atttacaactttgttactaagagaggacggtgcaaagggcggggctctaagatctcatgg 1141 Query: 405 acacaggttgagacagggtcagca 428 ||||||||||||||||| |||||| Sbjct: 1142 acacaggttgagacaggttcagca 1165
>gb|AY103958.1| Zea mays PCO141591 mRNA sequence Length = 1691 Score = 365 bits (184), Expect = 8e-98 Identities = 350/404 (86%), Gaps = 1/404 (0%) Strand = Plus / Plus Query: 19 ccgcccggtgacaattactacgccgcgctcaattctgccgtcttcagtgacggatccttc 78 ||||| || ||||| ||||| ||||| |||||||| || || ||||| |||||||||||| Sbjct: 463 ccgccgggcgacaactactatgccgccctcaattcagcggtgttcagcgacggatccttc 522 Query: 79 tgctacgtgcccaaggacacggtctgccccatggagatatctacctacttcagaatcaat 138 ||||||||||||||||||||||||||||||||||| || || || |||||||| ||||| Sbjct: 523 tgctacgtgcccaaggacacggtctgccccatggaaatttcgacttacttcaggatcaac 582 Query: 139 gataaggagaccgggcagttcgagaggactctgattgtggctgatgagaggagcacggtt 198 || |||||||| || ||||| ||||||||||||||||| || |||||||| ||||| ||| Sbjct: 583 gacaaggagacaggccagtttgagaggactctgattgtagccgatgagagaagcactgtt 642 Query: 199 agctatttggaaggttgtactgctccagcatatgactccaaccagctccatgccgcggtg 258 |||||||||||||| || ||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 643 agctatttggaaggctgcactgcaccagcatatgactcaaatcagctccatgctgcggtt 702 Query: 259 gtggagcttgtgtgcgaagagggggccgagattaagtactccaccgtgcagaattggtat 318 |||||||||||||| || | ||||| ||||||||||||||||| |||||||||||||| Sbjct: 703 gtggagcttgtgtgtgagaatggggcagagattaagtactccacggtgcagaattggtac 762 Query: 319 gctggtgatgagaagggcaaagggggcatttacaattttgtcactaagagggggcgctgc 378 | ||||||||| |||| | ||| |||||||| || ||||| || |||||||| | ||| Sbjct: 763 tccggtgatgaggaggggagaggaggcatttataactttgtgacaaagaggggaaggtgc 822 Query: 379 aaggggcgtggctcgaa-atctcatggacacaggttgagacagg 421 || ||||| || ||||| |||||||||||||||||||||||||| Sbjct: 823 aaagggcggggttcgaagatctcatggacacaggttgagacagg 866
>ref|NM_116715.3| Arabidopsis thaliana ATABC1 AT4G04770 (ATABC1) mRNA, complete cds Length = 1937 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 286 gagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggc 345 ||||||||||||||||| |||||||||||||||||||| ||||| | || ||||| || Sbjct: 1080 gagattaagtactccacggtgcagaattggtatgctggggatgaacaaggtaaaggtggg 1139 Query: 346 atttacaattttgtcac 362 ||||| ||||||||||| Sbjct: 1140 atttataattttgtcac 1156 Score = 46.1 bits (23), Expect = 0.100 Identities = 35/39 (89%) Strand = Plus / Plus Query: 144 ggagaccgggcagttcgagaggactctgattgtggctga 182 |||||| || ||||||||||||||| ||||||| ||||| Sbjct: 938 ggagactggtcagttcgagaggactttgattgttgctga 976 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 atctcatggacacaggttgagacagggtc 424 ||||| ||||| ||||||||||||||||| Sbjct: 1191 atctcgtggactcaggttgagacagggtc 1219
>emb|AL161501.2|ATCHRIV13 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 13 Length = 200001 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 286 gagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggc 345 ||||||||||||||||| |||||||||||||||||||| ||||| | || ||||| || Sbjct: 155787 gagattaagtactccacggtgcagaattggtatgctggggatgaacaaggtaaaggtggg 155728 Query: 346 atttacaattttgtcac 362 ||||| ||||||||||| Sbjct: 155727 atttataattttgtcac 155711 Score = 46.1 bits (23), Expect = 0.100 Identities = 35/39 (89%) Strand = Plus / Minus Query: 144 ggagaccgggcagttcgagaggactctgattgtggctga 182 |||||| || ||||||||||||||| ||||||| ||||| Sbjct: 155929 ggagactggtcagttcgagaggactttgattgttgctga 155891 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 396 atctcatggacacaggttgagacagggtc 424 ||||| ||||| ||||||||||||||||| Sbjct: 155676 atctcgtggactcaggttgagacagggtc 155648
>gb|AY142069.1| Arabidopsis thaliana At4g04770/T4B21_16 mRNA, complete cds Length = 1674 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 286 gagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggc 345 ||||||||||||||||| |||||||||||||||||||| ||||| | || ||||| || Sbjct: 1015 gagattaagtactccacggtgcagaattggtatgctggggatgaacaaggtaaaggtggg 1074 Query: 346 atttacaattttgtcac 362 ||||| ||||||||||| Sbjct: 1075 atttataattttgtcac 1091 Score = 46.1 bits (23), Expect = 0.100 Identities = 35/39 (89%) Strand = Plus / Plus Query: 144 ggagaccgggcagttcgagaggactctgattgtggctga 182 |||||| || ||||||||||||||| ||||||| ||||| Sbjct: 873 ggagactggtcagttcgagaggactttgattgttgctga 911 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 atctcatggacacaggttgagacagggtc 424 ||||| ||||| ||||||||||||||||| Sbjct: 1126 atctcgtggactcaggttgagacagggtc 1154
>gb|AY056410.1| Arabidopsis thaliana AT4g04770/T4B21_16 mRNA, complete cds Length = 1842 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 286 gagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggc 345 ||||||||||||||||| |||||||||||||||||||| ||||| | || ||||| || Sbjct: 1019 gagattaagtactccacggtgcagaattggtatgctggggatgaacaaggtaaaggtggg 1078 Query: 346 atttacaattttgtcac 362 ||||| ||||||||||| Sbjct: 1079 atttataattttgtcac 1095 Score = 46.1 bits (23), Expect = 0.100 Identities = 35/39 (89%) Strand = Plus / Plus Query: 144 ggagaccgggcagttcgagaggactctgattgtggctga 182 |||||| || ||||||||||||||| ||||||| ||||| Sbjct: 877 ggagactggtcagttcgagaggactttgattgttgctga 915 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 atctcatggacacaggttgagacagggtc 424 ||||| ||||| ||||||||||||||||| Sbjct: 1130 atctcgtggactcaggttgagacagggtc 1158
>gb|AY052195.1| Arabidopsis thaliana AT4g04770/T4B21_16 mRNA, complete cds Length = 1904 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 286 gagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggc 345 ||||||||||||||||| |||||||||||||||||||| ||||| | || ||||| || Sbjct: 1082 gagattaagtactccacggtgcagaattggtatgctggggatgaacaaggtaaaggtggg 1141 Query: 346 atttacaattttgtcac 362 ||||| ||||||||||| Sbjct: 1142 atttataattttgtcac 1158 Score = 46.1 bits (23), Expect = 0.100 Identities = 35/39 (89%) Strand = Plus / Plus Query: 144 ggagaccgggcagttcgagaggactctgattgtggctga 182 |||||| || ||||||||||||||| ||||||| ||||| Sbjct: 940 ggagactggtcagttcgagaggactttgattgttgctga 978 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 atctcatggacacaggttgagacagggtc 424 ||||| ||||| ||||||||||||||||| Sbjct: 1193 atctcgtggactcaggttgagacagggtc 1221
>tpg|BK001497.1| TPA: TPA_exp: Arabidopsis thaliana putative ABC transporter 1 mRNA, complete cds; nuclear gene for plastid product Length = 1674 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 286 gagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggc 345 ||||||||||||||||| |||||||||||||||||||| ||||| | || ||||| || Sbjct: 1015 gagattaagtactccacggtgcagaattggtatgctggggatgaacaaggtaaaggtggg 1074 Query: 346 atttacaattttgtcac 362 ||||| ||||||||||| Sbjct: 1075 atttataattttgtcac 1091 Score = 46.1 bits (23), Expect = 0.100 Identities = 35/39 (89%) Strand = Plus / Plus Query: 144 ggagaccgggcagttcgagaggactctgattgtggctga 182 |||||| || ||||||||||||||| ||||||| ||||| Sbjct: 873 ggagactggtcagttcgagaggactttgattgttgctga 911 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 atctcatggacacaggttgagacagggtc 424 ||||| ||||| ||||||||||||||||| Sbjct: 1126 atctcgtggactcaggttgagacagggtc 1154
>emb|BX827675.1|CNS0A3OT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZB06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1812 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 286 gagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggc 345 ||||||||||||||||| |||||||||||||||||||| ||||| | || ||||| || Sbjct: 1078 gagattaagtactccacggtgcagaattggtatgctggggatgaacaaggtaaaggtggg 1137 Query: 346 atttacaattttgtcac 362 ||||| ||||||||||| Sbjct: 1138 atttataattttgtcac 1154 Score = 46.1 bits (23), Expect = 0.100 Identities = 35/39 (89%) Strand = Plus / Plus Query: 144 ggagaccgggcagttcgagaggactctgattgtggctga 182 |||||| || ||||||||||||||| ||||||| ||||| Sbjct: 935 ggagactggtcagttcgagaggactttgattgttgctga 973 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 atctcatggacacaggttgagacagggtc 424 ||||| ||||| ||||||||||||||||| Sbjct: 1189 atctcgtggactcaggttgagacagggtc 1217
>gb|AF118223.2|T4B21 Arabidopsis thaliana BAC T4B21 Length = 91470 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 286 gagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggc 345 ||||||||||||||||| |||||||||||||||||||| ||||| | || ||||| || Sbjct: 44109 gagattaagtactccacggtgcagaattggtatgctggggatgaacaaggtaaaggtggg 44050 Query: 346 atttacaattttgtcac 362 ||||| ||||||||||| Sbjct: 44049 atttataattttgtcac 44033 Score = 46.1 bits (23), Expect = 0.100 Identities = 35/39 (89%) Strand = Plus / Minus Query: 144 ggagaccgggcagttcgagaggactctgattgtggctga 182 |||||| || ||||||||||||||| ||||||| ||||| Sbjct: 44251 ggagactggtcagttcgagaggactttgattgttgctga 44213 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 396 atctcatggacacaggttgagacagggtc 424 ||||| ||||| ||||||||||||||||| Sbjct: 43998 atctcgtggactcaggttgagacagggtc 43970
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 283 gccgagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaaggg 342 |||||||| |||||||| || |||||||| |||||||| || || || || ||||||||| Sbjct: 1473772 gccgagatcaagtactcgacggtgcagaactggtatgccggcgacgaaaacggcaaaggg 1473713 Query: 343 ggcatttacaattttgt 359 ||||||||||| ||||| Sbjct: 1473712 ggcatttacaactttgt 1473696
>gb|AY943856.1| Nicotiana benthamiana non-intrinsic ABC protein mRNA, partial cds Length = 1638 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 277 gagggggccgagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggc 336 ||||| || ||||||||||| ||||| |||||||| |||||||| || |||||| | || Sbjct: 973 gagggtgcggagattaagtattccactgtgcagaactggtatgcgggagatgaggaaggt 1032 Query: 337 aaagggggcatttacaattttgtcactaagagggg 371 ||||| || ||||| |||||||| || |||||||| Sbjct: 1033 aaaggaggtatttataattttgttacaaagagggg 1067
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 283 gccgagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaaggg 342 ||||| ||||| |||||||| |||||||| |||||||| || || || || ||||||||| Sbjct: 2210439 gccgaaattaaatactccacggtgcagaactggtatgccggcgacgaaaacggcaaaggg 2210498 Query: 343 ggcatttacaattttgt 359 |||||||| || ||||| Sbjct: 2210499 ggcatttataactttgt 2210515
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 295 tactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggcatttacaat 354 |||||||| ||||| || |||||||| || ||||| || |||||||||||||||||||| Sbjct: 487029 tactccactgtgcaaaactggtatgccggcgatgaaaatggcaaagggggcatttacaac 486970 Query: 355 tttgt 359 ||||| Sbjct: 486969 tttgt 486965
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 16 gtgccgcccggtgacaattactacgccgcgctcaattctgccgtcttcagtgacggatcc 75 |||||| |||| ||||||| ||||||||||||||| || || ||||||| ||||| || Sbjct: 1466201 gtgccgaccggcgacaatttctacgccgcgctcaactcggcagtcttcaccgacggctcg 1466260 Query: 76 ttctgctacgtgcccaagg 94 ||| |||||||||||||| Sbjct: 1466261 ttcgtctacgtgcccaagg 1466279
>dbj|AB011475.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9L2 Length = 60583 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 286 gagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggc 345 |||||||||||||| || ||||||||||| ||||| || ||||| | || ||||| || Sbjct: 27914 gagattaagtactcgacggtgcagaattgatatgcaggggatgaacaaggtaaaggtggg 27973 Query: 346 atttacaattttgtcac 362 ||||||||||| ||||| Sbjct: 27974 atttacaatttcgtcac 27990
>dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome Length = 1166239 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 103 tgccccatggagatatctacctacttcagaatcaatgataaggagaccgggcagttcgag 162 ||||| |||||||| ||||| || || ||||| |||||||||||| | |||||||||||| Sbjct: 1101069 tgccctatggagatttctacgtattttagaattaatgataaggagtcggggcagttcgag 1101010
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 196 gttagctatttggaaggttgtactgctccagcatatgactccaaccagctccatgccgcg 255 |||||||||||||||||||||||||| || |||||| |||| || || ||||| ||| Sbjct: 2872367 gttagctatttggaaggttgtactgcgcccatgtatgacaccaatcaacttcatgcggcg 2872426 Query: 256 gtggtgga 263 |||||||| Sbjct: 2872427 gtggtgga 2872434
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome Length = 1044459 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 109 atggagatatctacctacttcagaatcaatgataaggagaccgggca 155 |||||||||||||| || || |||||||||||||| ||| ||||||| Sbjct: 788683 atggagatatctacatattttagaatcaatgataaagagtccgggca 788729
>gb|AF490364.1| Ceratium horridum extrachromosomal minicircle putative ABC transporter membrane protein Ycf24 (ycf24) gene, partial cds; and putative ATP-dependent transporter Ycf16 (ycf16) gene, complete cds Length = 1954 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 394 aaatctcatggacacaggttgagacagggtcagc 427 |||| ||||||||||||||||||||||| ||||| Sbjct: 566 aaatttcatggacacaggttgagacaggttcagc 599
>emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome; segment 5/7 Length = 349746 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 292 aagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggcatttac 351 ||||| ||||| ||||| || |||||||||||||||||||| || || || |||||| Sbjct: 311498 aagtattccacggtgcaaaactggtatgctggtgatgagaatggtgttggaggtatttac 311439 Query: 352 aattttgtcactaagagggggc 373 || |||||||| ||| |||||| Sbjct: 311438 aactttgtcaccaagcgggggc 311417
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 283 gccgagattaagtactccaccgtgcagaattggtatgctggtgatg 328 ||||||||||| || ||||| |||||||| ||||||||||| |||| Sbjct: 2992466 gccgagattaaatattccacagtgcagaactggtatgctggcgatg 2992511
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 283 gccgagattaagtactccaccgtgcagaattggtatgctgg 323 ||||||||||| || ||||| |||||||| ||||||||||| Sbjct: 542997 gccgagattaaatattccacagtgcagaactggtatgctgg 543037
>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome Length = 1072950 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 103 tgccccatggagatatctacctacttcagaatcaatgataa 143 ||||| ||||| ||||||||||| || |||||||||||||| Sbjct: 65667 tgcccaatggaaatatctacctattttagaatcaatgataa 65707
>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome Length = 1042519 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 109 atggagatatctacctacttcagaatcaatgataaggagaccgg 152 |||||||||||||| || || |||||||||||||| ||| |||| Sbjct: 785936 atggagatatctacatattttagaatcaatgataaagagtccgg 785979
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Minus Query: 236 ccaaccagctccatgccgcggtggtggagcttgtg 270 |||||||||| ||||| ||||||||||| |||||| Sbjct: 2091610 ccaaccagctgcatgcggcggtggtggaacttgtg 2091576
>gb|AE017159.1| Chlamydophila pneumoniae TW-183, section 3 of 4 of the complete genome Length = 300066 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Minus Query: 298 tccaccgtgcagaattggtatgctggtgatgagaa 332 ||||| ||||| |||||||||||||||||| |||| Sbjct: 170247 tccacggtgcaaaattggtatgctggtgataagaa 170213
>gb|AF329697.1| Xanthomonas oryzae pv. oryzae insertion sequence IS1051-X and insertion sequence IS1389-X, complete sequence Length = 17229 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 283 gccgagattaagtactccaccgtgcagaattggta 317 ||||| || |||||||||||||||||||| ||||| Sbjct: 4318 gccgaaatcaagtactccaccgtgcagaactggta 4352
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Minus Query: 283 gccgagattaagtactccaccgtgcagaattggta 317 ||||| || |||||||||||||||||||| ||||| Sbjct: 1413792 gccgaaatcaagtactccaccgtgcagaactggta 1413758
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome Length = 1229853 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Plus Query: 298 tccaccgtgcagaattggtatgctggtgatgagaa 332 ||||| ||||| |||||||||||||||||| |||| Sbjct: 67476 tccacggtgcaaaattggtatgctggtgataagaa 67510
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome Length = 1230230 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Minus Query: 298 tccaccgtgcagaattggtatgctggtgatgagaa 332 ||||| ||||| |||||||||||||||||| |||| Sbjct: 774108 tccacggtgcaaaattggtatgctggtgataagaa 774074
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence Length = 1226565 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Minus Query: 298 tccaccgtgcagaattggtatgctggtgatgagaa 332 ||||| ||||| |||||||||||||||||| |||| Sbjct: 773430 tccacggtgcaaaattggtatgctggtgataagaa 773396
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Minus Query: 283 gccgagattaagtactccaccgtgcagaattggta 317 ||||| || |||||||||||||||||||| ||||| Sbjct: 1439446 gccgaaatcaagtactccaccgtgcagaactggta 1439412
>gb|DQ228208.1| Mus musculus clone 34B7 immunoglobulin light chain variable region mRNA, partial cds Length = 303 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|DQ202342.1| Synthetic construct anti-Bordetella pertussis single chain variable fragment antibody type 6 D6 gene, complete cds Length = 870 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 71 gagacagggtcagcatcacctg 92
>gb|AY605277.1| Mus musculus clone F26G10 immunoglobulin gamma light chain variable region mRNA, partial cds Length = 368 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 67 gagacagggtcagcatcacctg 88
>gb|AY605276.1| Mus musculus clone F26G9 immunoglobulin gamma light chain variable region mRNA, partial cds Length = 348 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|AY591680.1| Mus musculus clone IgK8-24 immunoglobulin kappa-like gene, partial sequence Length = 3362 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 3105 gagacagggtcagcatcacctg 3084
>gb|AY591618.1| Mus musculus clone IgK19-25 immunoglobulin kappa-like gene, partial sequence Length = 4523 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 2285 gagacagggtcagcatcacctg 2306
>gb|AY591617.1| Mus musculus clone IgK19-23 immunoglobulin kappa-like gene, partial sequence Length = 3022 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 1691 gagacagggtcagcatcacctg 1712
>gb|AY591615.1| Mus musculus clone IgK19-17 immunoglobulin kappa-like gene, partial sequence Length = 3523 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 1785 gagacagggtcagcatcacctg 1806
>gb|AY591613.1| Mus musculus clone IgK19-14 immunoglobulin kappa-like gene, partial sequence Length = 3101 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 1409 gagacagggtcagcatcacctg 1430
>gb|AY591612.1| Mus musculus clone IgK19-13 immunoglobulin kappa-like gene, partial sequence Length = 3001 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 1747 gagacagggtcagcatcacctg 1768
>gb|DQ022662.1| Synthetic construct clone B7 anti-White Spot Syndrome Virus single-chain variable fragment antibody mRNA, partial cds Length = 729 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 452 gagacagggtcagcatcacctg 473
>ref|XR_004141.1| PREDICTED: Mus musculus similar to Ig kappa chain V-V region MPC11 precursor (LOC673123), mRNA Length = 418 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 134 gagacagggtcagcatcacctg 155
>gb|AY437049.1| Mus musculus ZB9G6 ANA immunoglobulin kappa light chain gene, partial cds Length = 324 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 41 gagacagggtcagcatcacctg 62
>gb|AY437033.1| Mus musculus ZB7A4 ANA immunoglobulin kappa light chain gene, partial cds Length = 335 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 41 gagacagggtcagcatcacctg 62
>gb|AY436997.1| Mus musculus ZA7A4 ANA immunoglobulin kappa light chain gene, partial cds Length = 335 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 41 gagacagggtcagcatcacctg 62
>gb|AY208337.1| Mus musculus isolate 531 immunoglobulin light chain variable region mRNA, partial cds Length = 364 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>ref|XM_972850.1| PREDICTED: Mus musculus similar to Ig kappa chain V-V region MPC11 precursor (LOC669070), mRNA Length = 426 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 161 gagacagggtcagcatcacctg 182
>ref|XM_972773.1| PREDICTED: Mus musculus similar to Ig kappa chain V-V region MPC11 precursor (LOC669053), mRNA Length = 423 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 158 gagacagggtcagcatcacctg 179
>ref|XM_993562.1| PREDICTED: Mus musculus similar to Ig kappa chain V-V region MPC11 precursor (LOC672450), mRNA Length = 408 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 134 gagacagggtcagcatcacctg 155
>ref|XM_987914.1| PREDICTED: Mus musculus similar to Ig kappa chain V-V region MPC11 precursor (LOC676175), mRNA Length = 426 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 161 gagacagggtcagcatcacctg 182
>ref|XM_987837.1| PREDICTED: Mus musculus similar to Ig kappa chain V-V region MPC11 precursor (LOC676162), mRNA Length = 423 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 158 gagacagggtcagcatcacctg 179
>ref|XM_987671.1| PREDICTED: Mus musculus similar to Ig kappa chain V-V region MPC11 precursor (LOC676136), mRNA Length = 417 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 134 gagacagggtcagcatcacctg 155
>ref|XM_912852.2| PREDICTED: Mus musculus similar to Ig kappa chain V-V region MPC11 precursor (LOC637227), mRNA Length = 426 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 161 gagacagggtcagcatcacctg 182
>ref|XM_993141.1| PREDICTED: Mus musculus similar to Ig kappa chain V-V region MPC11 precursor (LOC667899), mRNA Length = 426 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 161 gagacagggtcagcatcacctg 182
>ref|XM_993086.1| PREDICTED: Mus musculus similar to Ig kappa chain V-V region MPC11 precursor (LOC667881), mRNA Length = 423 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 158 gagacagggtcagcatcacctg 179
>ref|XM_992972.1| PREDICTED: Mus musculus similar to Ig kappa chain V-V region MPC11 precursor (LOC667865), mRNA Length = 402 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 119 gagacagggtcagcatcacctg 140
>ref|XM_992727.1| PREDICTED: Mus musculus similar to Ig kappa chain V-V region MPC11 precursor (LOC637227), mRNA Length = 426 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 161 gagacagggtcagcatcacctg 182
>gb|AY436900.1| Mus musculus cell-line 1EG3 ANA immunoglobulin kappa light chain gene, partial cds Length = 304 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 42 gagacagggtcagcatcacctg 63
>gb|AY436871.1| Mus musculus cell-line 1EA6 ANA immunoglobulin kappa light chain gene, partial cds Length = 264 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 20 gagacagggtcagcatcacctg 41
>gb|AY436836.1| Mus musculus cell-line 1DA2 ANA immunoglobulin kappa light chain gene, partial cds Length = 265 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 24 gagacagggtcagcatcacctg 45
>gb|AF087029.1| Mus musculus hybrid 3-15C4 immunoglobulin light chain gene, partial sequence Length = 327 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|AF087028.1| Mus musculus hybrid 2-15E11 immunoglobulin light chain gene, partial sequence Length = 318 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|AF087027.1| Mus musculus hybrid 1-3E8 immunoglobulin light chain gene, partial sequence Length = 324 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 292 aagtactccaccgtgcagaattggtatgctggtgatga 329 |||||||||||||| ||||| ||||| || |||||||| Sbjct: 316044 aagtactccaccgttcagaactggtacgcaggtgatga 316081
>gb|AC155332.10| Mus musculus 6 BAC RP24-140J8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 202181 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 197135 gagacagggtcagcatcacctg 197114 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 152203 gagacagggtcagcatcacctg 152224
>gb|DQ220793.1| Mus musculus immunoglobin kappa light chain variable region mRNA, partial cds Length = 461 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 133 gagacagggtcagcatcacctg 154
>gb|AC153928.5| Mus musculus 6 BAC RP23-66O20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 241211 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 221721 gagacagggtcagcatcacctg 221742
>emb|X75101.1|MMASWA1H M.musculus (A.SW) mRNA for ASWA1 antibody light chain variable region Length = 279 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>emb|X75103.1|MMASWP1 M.musculus (A.SW) mRNA for ASWP1 antibody light chain variable region Length = 272 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>emb|X75102.1|MMASWB1 M.musculus (A.SW) mRNA for ASWB1 antibody light chain variable region Length = 246 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 28 gacaattactacgccgcgctcaattc 53 ||||| |||||||||||||||||||| Sbjct: 2000596 gacaactactacgccgcgctcaattc 2000621
>gb|U64994.1|XXU64991 Synthetic construct anti-human erbB-2 receptor bifunctional single-chain antibody-phosphatase fusion protein, partial cds Length = 894 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 545 gagacagggtcagcatcacctg 566
>gb|AY058908.1| Mus musculus anti-human CD37 antibody WR17 kappa light chain variable region mRNA, complete cds Length = 353 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 53 gagacagggtcagcatcacctg 74
>gb|AC158672.6| Mus musculus 6 BAC RP23-64J23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216954 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 202254 gagacagggtcagcatcacctg 202275 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 91150 gagacagggtcagcatcacctg 91129 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 46218 gagacagggtcagcatcacctg 46239
>gb|S72523.1| anti-estradiol antibody light chain variable region {clone 4} [mice, BALB/c, spleen cell-SP20 hybridoma, mRNA Partial, 294 nt] Length = 294 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 26 gagacagggtcagcatcacctg 47
>gb|S72516.1| anti-estradiol antibody light chain variable region {clone G2} [mice, BALB/c, spleen cell-SP20 hybridoma, mRNA Partial, 294 nt] Length = 294 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 26 gagacagggtcagcatcacctg 47
>gb|U55623.1|MMU55623 Mus musculus anti-DNA immunoglobulin light chain IgG, antibody 384p.26, partial cds Length = 299 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 34 gagacagggtcagcatcacctg 55
>gb|U55607.1|MMU55607 Mus musculus anti-DNA immunoglobulin light chain IgG, antibody 373s.55, partial cds Length = 299 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 34 gagacagggtcagcatcacctg 55
>gb|S58457.1| Ig V kappa [mice, C57BL/6, M95 transgenic line, hybridoma L3.10.6.5, mRNA Partial, 300 nt] Length = 300 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 23 gagacagggtcagcatcacctg 44
>gb|AY648684.1| Mus musculus clone SPLL27 immunoglobulin light chain variable region mRNA, partial cds Length = 416 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 119 gagacagggtcagcatcacctg 140
>gb|AY648682.1| Mus musculus clone SPLL25 immunoglobulin light chain variable region mRNA, partial cds Length = 362 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 65 gagacagggtcagcatcacctg 86
>gb|AF163743.1|AF163743 Mus musculus mAb 24.1.2 immunoglobulin light chain variable region mRNA, partial cds Length = 321 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|AC156284.8| Mus musculus 6 BAC RP24-392D13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 182146 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 105436 gagacagggtcagcatcacctg 105415 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 82887 gagacagggtcagcatcacctg 82866 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 19448 gagacagggtcagcatcacctg 19469
>gb|AF276281.1|AF276281 Mus musculus isolate 174L immunoglobulin light chain variable region mRNA, partial cds Length = 362 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 61 gagacagggtcagcatcacctg 82
>gb|AF143908.1|AF143908 Mus musculus clone PR1-1 immunoglobulin kappa light chain variable region mRNA, partial cds Length = 322 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|AF192257.1|AF192257 Mus musculus immunoglobulin kappa light chain variable domain mRNA, partial cds Length = 327 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|BC091754.1| Mus musculus immunoglobulin kappa chain, constant region, mRNA (cDNA clone MGC:103317 IMAGE:4219018), complete cds Length = 948 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 122 gagacagggtcagcatcacctg 143
>gb|AC153855.4| Mus musculus 6 BAC RP23-175B24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 183070 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 94684 gagacagggtcagcatcacctg 94663 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 72135 gagacagggtcagcatcacctg 72114 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 8696 gagacagggtcagcatcacctg 8717
>gb|AF137623.1|AF137623 Mus musculus clone HV1-4G2 anti-fluorescein immunoglobulin light chain mRNA, partial cds Length = 322 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 34 gagacagggtcagcatcacctg 55
>gb|DQ321368.1| Mus musculus clone P35 immunoglobulin light chain variable region mRNA, partial cds Length = 321 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|AF004328.1|AF004328 Mus musculus Ig kappa light chain variable region, monoclonal IgG2a antibody IIB4 specific to haemagglutinin of influenza A virus, gene, partial cds Length = 393 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 119 gagacagggtcagcatcacctg 140
>gb|AF001496.1|AF001496 Mus musculus monoclonal antibody kappa chain variable region mRNA, partial cds Length = 381 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 107 gagacagggtcagcatcacctg 128
>gb|U78498.1|MMU78498 Mus musculus anti-polycation monoclonal antibody, Ig light chain variable region mRNA, partial cds Length = 293 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 22 gagacagggtcagcatcacctg 43
>gb|U41435.1|MMU41435 Mus musculus monoclonal antibody FC3 to cardiolipin, Ig light variable region mRNA, partial cds Length = 246 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|U41434.1|MMU41434 Mus musculus monoclonal antibody FC2 to beta-2-glycoprotein I, Ig light chain variable region mRNA, partial cds Length = 235 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|L41875.1|MUSIKCA Mus musculus immunoglobulin kappa chain mRNA, 5' end of cds Length = 384 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 107 gagacagggtcagcatcacctg 128
>gb|M23690.1|HUMIGLIA Mus musculus immunoglobulin light chain kappa VJ region (Igk) gene, exons 1 and 2 and partial cds Length = 618 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 316 gagacagggtcagcatcacctg 337
>gb|AF045512.1|AF045512 Mus musculus 9E10 monoclonal antibody kappa light chain variable region, (IgK) mRNA, partial cds Length = 381 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 107 gagacagggtcagcatcacctg 128
>dbj|AB090862.1| Mus musculus Igk mRNA for immunoglobulin kappa chain, partial cds, cell_line:Konishi-6 Length = 345 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>dbj|AB090861.1| Mus musculus Igk mRNA for immunoglobulin kappa chain, partial cds, cell_line:Konishi-4 Length = 345 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|L48672.1|MUSAC Mus musculus (cell line C3H/F2-22) chromosome 6 anti-DNA antibody light chain mRNA Length = 324 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|M64165.1|MUSIGKAFQ Mus musculus Ig active kappa-chain mRNA V-region Length = 313 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|M64154.1|MUSIGKAFF Mus musculus Ig active kappa-chain mRNA V-region Length = 286 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 20 gagacagggtcagcatcacctg 41
>gb|L20956.1|MUSIGKAQD Mus musculus Ig rearranged L-chain mRNA V-region, 5' end of cds Length = 321 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|DQ083998.1| Mus musculus anti-West Nile virus monoclonal antibody light chain variable region mRNA, partial cds Length = 321 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>emb|AL512346.41| Mouse DNA sequence from clone RP23-322E15 on chromosome X, complete sequence Length = 227395 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 123 ctacttcagaatcaatgataaggaga 148 ||||||||||||| |||||||||||| Sbjct: 169340 ctacttcagaatctatgataaggaga 169365
>emb|X96775.1|MMIGKVRTA M.musculus mRNA for immunoglobulin kappa variable region Length = 321 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>emb|AJ235962.1|MMU235962 Mus musculus IgVk 19-25 gene Length = 721 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 405 gagacagggtcagcatcacctg 426
>emb|AJ235961.1|MMU235961 Mus musculus IgVk 19-23 gene Length = 1021 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 691 gagacagggtcagcatcacctg 712
>emb|X91669.1|MMIGK15H8 M.musculus mRNA for Ig kappa light chain variable region (cell line 15H8) Length = 393 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 119 gagacagggtcagcatcacctg 140
>emb|X90898.1|MMALCVR23 M.musculus antibody light chain variable region (321bp) Length = 321 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>emb|X58594.1|MMIG021 Mouse hybridoma e3 mRNA for immunoglobuin kappa light chain V region Length = 327 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>emb|X70097.1|MMNPCRLB6 M.musculus NPCRLB6 mRNA for immunoglobulin light chain, variable region Length = 321 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>emb|X70095.1|MMNPCRLB1 M.musculus NPCRLB1 mRNA for immunoglobulin light chain, variable region Length = 321 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|M57985.1|MUSIGKAAAH Mouse IgK chain mRNA, VJ2 region Length = 300 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 23 gagacagggtcagcatcacctg 44
>emb|X80939.1|MMG10L M.musculus immunoglobulin VJ region (G10L) Length = 297 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 23 gagacagggtcagcatcacctg 44
>emb|X77917.1|MMIGGILV M.musculus mRNA for IgG1 rearranged light chain variable region Length = 321 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>emb|Y15978.1|MMY15978 Mus musculus V kappa 19-17 gene, partial Length = 709 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 411 gagacagggtcagcatcacctg 432
>emb|Y15975.1|MMY15975 Mus musculus V kappa 19-14 gene, partial Length = 691 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 399 gagacagggtcagcatcacctg 420
>emb|X05877.1|MMIGKV Mouse mRNA for immunoglobulin kappa variable region Length = 462 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 140 gagacagggtcagcatcacctg 161
>emb|X78108.1|MMIGKLCV M.musculus (BALB/c) mRNA for immunoglobulin kappa light chain variable region Length = 387 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 113 gagacagggtcagcatcacctg 134
>gb|L32698.1|MUSVHMABB Mouse rearranged immunoglobulin kappa light chain Length = 321 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|L21025.1|MUSIGMRNAJ Mus musculus immunoglobulin light chain (IgL) mRNA, VJ region, partial cds Length = 318 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|L16815.1|MUSIGKVII Mus musculus Ig rearranged kappa-chain gene V19-J1 region Length = 324 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|L16839.1|MUSIGKV93 Mus musculus Ig rearranged kappa-chain gene V19-J1 region Length = 324 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|L16838.1|MUSIGKV77 Mus musculus Ig rearranged kappa-chain gene V19-J1 region Length = 324 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|L19553.1|MUSIGKV6A Mus musculus Ig rearranged kappa-chain (Igk-V19) mRNA V19-J1 region Length = 320 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 43 gagacagggtcagcatcacctg 64
>gb|L16836.1|MUSIGKV63 Mus musculus Ig rearranged kappa-chain gene V19-J1 region Length = 324 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|L16832.1|MUSIGKV57 Mus musculus Ig rearranged kappa-chain gene V19-J1 region Length = 324 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|L16830.1|MUSIGKV56 Mus musculus Ig rearranged kappa-chain gene V19-J1 region Length = 324 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|L16825.1|MUSIGKV31 Mus musculus Ig rearranged kappa-chain gene V19-J1 region Length = 324 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|L16823.1|MUSIGKV25 Mus musculus Ig rearranged kappa-chain gene V19-J1 region Length = 324 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|L16821.1|MUSIGKV17B Mus musculus Ig rearrange kappa-chain gene V19-J1 region Length = 324 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|L16817.1|MUSIGKV08 Mus musculus Ig rearranged kappa-chain gene V19-J1 region Length = 324 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|M36251.1|MUSIGLAFF Mouse Ig kappa-chain mRNA V region, partial cds, from hybridoma H250-6 Length = 318 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|M36250.1|MUSIGLAFE Mouse Ig kappa-chain mRNA V region, partial cds, from hybridoma H230-5 Length = 303 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|M36249.1|MUSIGLAFD Mouse Ig kappa-chain mRNA V region, partial cds, from hybridoma H230-2 Length = 315 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|M36245.1|MUSIGLAEZ Mouse Ig kappa-chain mRNA V region, partial cds, from hybridoma H220-22 Length = 303 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 29 gagacagggtcagcatcacctg 50
>gb|M26002.1|MUSIGKCPD Mouse Ig rearranged kappa-chain Vk 19.34 gene, partial cds, from Abelson virus transformed B cells Length = 283 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|M19765.1|MUSIGKCNL Mouse Ig active kappa chain mRNA V-region PKAPPA, partial cds Length = 285 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|M19914.1|MUSIGKCNK Mouse Ig rearranged kappa-chain mRNA, clone AN12K Length = 456 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 137 gagacagggtcagcatcacctg 158
>gb|M17161.1|MUSIGKCKP Mouse Ig kappa-chain mRNA V-region (VJ), from hybridoma A003-40/5G7k Length = 341 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 64 gagacagggtcagcatcacctg 85
>gb|K02156.1|MUSIGKBA Mouse Ig active kappa V-region, anti-CEA mRNA from CEA 66-E3, subgroup V-kappa-22 Length = 414 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 140 gagacagggtcagcatcacctg 161
>gb|J00569.1|MUSIGKAQ Mouse Ig kappa active gene: kappa-tnp V-J region Length = 765 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 478 gagacagggtcagcatcacctg 499
>gb|J00561.1|MUSIGKAL Mouse Ig active kappa gene: MPC11 V-J region Length = 739 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 464 gagacagggtcagcatcacctg 485
>gb|M34623.1|MUSIGKACE Mouse Ig rearranged kappa-chain (NC8-E2) mRNA Vk19 region, partial cds Length = 268 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|L14555.1|MUSIGLVC92 Mus musculus Ig rearranged light chain V region CC92 mRNA, partial cds Length = 379 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 104 gagacagggtcagcatcacctg 125
>dbj|D85126.1| Mus musculus mRNA for immunoglobulin kappa chain, partial cds Length = 345 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 gagacagggtcagcatcacctg 435 |||||||||||||||||||||| Sbjct: 47 gagacagggtcagcatcacctg 68
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 238 aaccagctccatgccgcggtggtggagct 266 ||||||||||| ||||||||||| ||||| Sbjct: 683199 aaccagctccacgccgcggtggtcgagct 683171
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 238 aaccagctccatgccgcggtggtggagct 266 |||||||| |||||||||||||| ||||| Sbjct: 4501371 aaccagctgcatgccgcggtggtcgagct 4501399
>emb|AJ438610.1|AGA438610 Anopheles gambiae DNA from chromosome 2R, BAC clone 4F11 Length = 129642 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 tgtgtgcgaagagggggccga 287 ||||||||||||||||||||| Sbjct: 24813 tgtgtgcgaagagggggccga 24793
>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome Length = 1173390 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 103 tgccccatggagatatctacctacttcagaatcaatgataaggag 147 ||||| |||||||| |||||||| || || || |||||||||||| Sbjct: 65115 tgccctatggagatttctacctattttaggattaatgataaggag 65159
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 aattggtatgctggtgatga 329 |||||||||||||||||||| Sbjct: 80011 aattggtatgctggtgatga 79992
>gb|AC163770.3| Pan troglodytes BAC clone CH251-4E4 from chromosome unknown, complete sequence Length = 210071 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 agctccatgccgcggtggtg 261 |||||||||||||||||||| Sbjct: 65967 agctccatgccgcggtggtg 65986
>gb|AC139240.4| Mus musculus BAC clone RP24-128J14 from chromosome 18, complete sequence Length = 173054 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 120 tacctacttcagaatcaatgataaggag 147 ||||||||||| |||||| ||||||||| Sbjct: 90864 tacctacttcacaatcaaagataaggag 90837
>emb|AL136532.22| Human DNA sequence from clone RP11-379F14 on chromosome 20 Contains the MRPS16P gene for mitochondrial ribosomal protein S16 pseudogene, complete sequence Length = 94387 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgtggctgatgagaggagca 193 |||||||||||||||||||| Sbjct: 74113 tgtggctgatgagaggagca 74132
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 40.1 bits (20), Expect = 6.2 Identities = 53/64 (82%) Strand = Plus / Minus Query: 299 ccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggcatttacaattttg 358 ||||||| || ||||||||| | || ||||| | ||||| || ||||| |||||||||| Sbjct: 1310186 ccaccgtacaaaattggtatcccggcgatgaagaaggcaagggcggcatctacaattttg 1310127 Query: 359 tcac 362 |||| Sbjct: 1310126 tcac 1310123
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 283 gccgagattaagtactccaccgtgcagaattggtat 318 |||||||| ||||| || ||||||||||| |||||| Sbjct: 202605 gccgagatcaagtattcgaccgtgcagaactggtat 202640
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 40.1 bits (20), Expect = 6.2 Identities = 65/80 (81%) Strand = Plus / Minus Query: 286 gagattaagtactccaccgtgcagaattggtatgctggtgatgagaagggcaaagggggc 345 ||||| || ||||| || ||||| || |||||| | |||||||| || |||||||| || Sbjct: 163418 gagatcaaatactctacggtgcaaaactggtatccgggtgatgaaaacggcaaaggcggt 163359 Query: 346 atttacaattttgtcactaa 365 || || || ||||||||||| Sbjct: 163358 atctataactttgtcactaa 163339
>gb|AC010102.3|AC010102 Homo sapiens BAC clone RP11-486B15 from 2, complete sequence Length = 230827 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgtggctgatgagaggagca 193 |||||||||||||||||||| Sbjct: 213244 tgtggctgatgagaggagca 213263
>gb|AC159824.2| Mus musculus BAC clone RP23-122E19 from chromosome 9, complete sequence Length = 225745 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 gagacagggtcagcatcacc 433 |||||||||||||||||||| Sbjct: 161446 gagacagggtcagcatcacc 161427
>emb|X53636.1|MME225L M.musculus mRNA for Light chain variable domain of E225, anti- idioptic antibody Length = 546 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 gacagggtcagcatcacctg 435 |||||||||||||||||||| Sbjct: 262 gacagggtcagcatcacctg 281 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,365,738 Number of Sequences: 3902068 Number of extensions: 3365738 Number of successful extensions: 57377 Number of sequences better than 10.0: 171 Number of HSP's better than 10.0 without gapping: 171 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56850 Number of HSP's gapped (non-prelim): 519 length of query: 457 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 435 effective length of database: 17,147,199,772 effective search space: 7459031900820 effective search space used: 7459031900820 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)