ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet72e02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PRMA_RALSO (Q8XVP2) Ribosomal protein L11 methyltransferase (EC ... 28 9.7

>PRMA_RALSO (Q8XVP2) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 298

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = +2

Query: 140 DQLRLQTATFSGLSLGDSIWSSPADNNAPRSR----NADPGL 253
           D +RL  + F  + +G+ IW  P+ ++AP+        DPGL
Sbjct: 101 DWVRLTQSQFEPIHIGEHIWVVPSWHDAPQPEAVVLELDPGL 142


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.143    0.456 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,592,074
Number of Sequences: 219361
Number of extensions: 511248
Number of successful extensions: 1423
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
to top