ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet72d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X15693.1|HVLP58 Barley mRNA for chloroplast high molecular m... 337 2e-89
2ref|NM_188763.1| Oryza sativa (japonica cultivar-group), predic... 111 2e-21
3gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, ... 111 2e-21
4dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
6dbj|AK062972.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
7emb|X15691.1|HVLP60 Barley mRNA for chloroplast low molecular ma... 109 8e-21
8ref|XM_476845.1| Oryza sativa (japonica cultivar-group), mRNA 103 5e-19
9ref|XM_476844.1| Oryza sativa (japonica cultivar-group), mRNA 103 5e-19
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
11dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
12emb|X15692.1|HVLP90 Barley mRNA for chloroplast low molecular ma... 103 5e-19
13gb|AF365951.1|AF365951 Zea mays early light-inducible protein EL... 100 8e-18
14dbj|AB019617.1| Triticum aestivum wcr (wheat cold-regulated) 12 ... 92 2e-15
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
16dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
17ref|XM_468708.1| Oryza sativa (japonica cultivar-group), mRNA 78 3e-11
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 78 3e-11
19gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genom... 78 3e-11
20dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
21gb|AF017356.1|AF017356 Oryza sativa low molecular early light-in... 72 2e-09
22gb|AF017357.1|AF017357 Oryza sativa low molecular early light-in... 64 4e-07
23emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4,... 62 2e-06
24dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
25emb|AJ234846.1|HVU234846 Hordeum vulgare genomic DNA fragment; c... 54 4e-04
26ref|XM_511771.1| PREDICTED: Pan troglodytes similar to beta-tubu... 44 0.39
27gb|AC163033.4| Mus musculus BAC clone RP23-432F6 from chromosome... 42 1.5
28gb|AC007000.2| Homo sapiens BAC clone RP11-467H10 from 7, comple... 42 1.5
29gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 42 1.5
30gb|AC098851.5| Homo sapiens BAC clone RP13-574L22 from 7, comple... 42 1.5
31gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.5
32gb|AY847686.1| Dunaliella salina chloroplast carotene biosynthes... 42 1.5
33dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.5
34gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipie... 40 6.1
35gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 6.1
36gb|CP000114.1| Streptococcus agalactiae A909, complete genome 40 6.1
37emb|AJ578506.1|EGU578506 Elaeis guineensis microsatellite DNA, c... 40 6.1
38emb|X61361.1|EGLHCAB E.gracilis gene for light harvesting chloro... 40 6.1
39gb|AE014266.1| Streptococcus agalactiae 2603V/R section 76 of 10... 40 6.1
40emb|AL663010.4|OSJN00211 Oryza sativa genomic DNA, chromosome 4,... 40 6.1
41emb|AL766852.1|SAG766852 Streptococcus agalactiae NEM316 complet... 40 6.1
42gb|AE005871.1| Caulobacter crescentus CB15 section 197 of 359 of... 40 6.1
43emb|AL121750.22|HSJ323A24 Human DNA sequence from clone RP3-323A... 40 6.1
44dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
45dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.1
46dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
47dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
48emb|AJ414383.1|RSO414383 Ralstonia solanacearum partial mutS gene 40 6.1
49dbj|AK120621.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
50dbj|AK072084.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
51emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.1
52emb|Z54072.1|HSL261H12 Human DNA sequence from clone LA04NC01-26... 40 6.1 
>emb|X15693.1|HVLP58 Barley mRNA for chloroplast high molecular mass early
           light-inducible protein (ELIP) (clone HV58)
          Length = 860

 Score =  337 bits (170), Expect = 2e-89
 Identities = 179/182 (98%)
 Strand = Plus / Plus

                                                                       
Query: 273 cacgagcccgtccccgaccccgatcccggcagcacccaagcccatgaccaagaaggctaa 332
           ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 367 cacgagcccgtccccgaccacgatcccggcagcacccaagcccgtgaccaagaaggctaa 426

                                                                       
Query: 333 cccctcggtctgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccg 392
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cccctcggtctgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccg 486

                                                                       
Query: 393 gctggccatggtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggct 452
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 487 gctggccatggtaggcttcgtggctgcgctgtccgtcgaggcggcgcgtggcggtgggct 546

             
Query: 453 cc 454
           ||
Sbjct: 547 cc 548



 Score =  325 bits (164), Expect = 7e-86
 Identities = 176/180 (97%)
 Strand = Plus / Plus

                                                                       
Query: 31  accatcgatcttagcaagcagcaccttctctagttctcttcttgcgctagcttttctctg 90
           |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 14  accaccgatcttagcaaggagcaccttctctagttctcttcttgcgctagcttttctctg 73

                                                                       
Query: 91  ccttgagtgatggcgaccatggtggctttgagctccttcgccgttgttggcctgtcggcc 150
           |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 74  ccttgagtgatggcgaccatggtggctttgagctccttcgccgttgttggccggtccgcc 133

                                                                       
Query: 151 gcccgttctccagtggtggccccgcgccggcgcaccctcgtcgtcagggcccagaccgag 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gcccgttctccagtggtggccccgcgccggcgcaccctcgtcgtcagggcccagaccgag 193



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 43/43 (100%)
 Strand = Plus / Plus

                                                      
Query: 209 agcctgacatggactcagccaaggagacgacgagcgcgtcgac 251
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agcctgacatggactcagccaaggagacgacgagcgcgtcgac 345
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>ref|NM_188763.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 609

 Score =  111 bits (56), Expect = 2e-21
 Identities = 98/112 (87%)
 Strand = Plus / Plus

                                                                       
Query: 343 tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
           ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 271 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 330

                                                               
Query: 403 gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcc 454
           || || |||||| |||||||| |||| |||||| |||| ||||| |||||||
Sbjct: 331 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcc 382



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 187 ctcgtcgtcagggcccagaccgagcc 212
           |||||||||||||||||| |||||||
Sbjct: 121 ctcgtcgtcagggcccagtccgagcc 146
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>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score =  111 bits (56), Expect = 2e-21
 Identities = 98/112 (87%)
 Strand = Plus / Plus

                                                                         
Query: 343   tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
             ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 25483 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 25542

                                                                 
Query: 403   gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcc 454
             || || |||||| |||||||| |||| |||||| |||| ||||| |||||||
Sbjct: 25543 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcc 25594



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 187   ctcgtcgtcagggcccagaccgag 210
             |||||||||||||||||| |||||
Sbjct: 25240 ctcgtcgtcagggcccagtccgag 25263
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>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0004G10
          Length = 150379

 Score =  111 bits (56), Expect = 2e-21
 Identities = 98/112 (87%)
 Strand = Plus / Plus

                                                                         
Query: 343   tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
             ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 58021 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 58080

                                                                 
Query: 403   gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcc 454
             || || |||||| |||||||| |||| |||||| |||| ||||| |||||||
Sbjct: 58081 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcc 58132



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 187   ctcgtcgtcagggcccagaccgag 210
             |||||||||||||||||| |||||
Sbjct: 57778 ctcgtcgtcagggcccagtccgag 57801
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  111 bits (56), Expect = 2e-21
 Identities = 98/112 (87%)
 Strand = Plus / Plus

                                                                           
Query: 343     tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
               ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 8061370 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 8061429

                                                                   
Query: 403     gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcc 454
               || || |||||| |||||||| |||| |||||| |||| ||||| |||||||
Sbjct: 8061430 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcc 8061481



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 187     ctcgtcgtcagggcccagaccgag 210
               |||||||||||||||||| |||||
Sbjct: 8061127 ctcgtcgtcagggcccagtccgag 8061150
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>dbj|AK062972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-E06, full
           insert sequence
          Length = 942

 Score =  111 bits (56), Expect = 2e-21
 Identities = 98/112 (87%)
 Strand = Plus / Plus

                                                                       
Query: 343 tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
           ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 420 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 479

                                                               
Query: 403 gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcc 454
           || || |||||| |||||||| |||| |||||| |||| ||||| |||||||
Sbjct: 480 gtggggttcgtgtcggcgctggccgtggaggcgtcgcgcggcggcgggctcc 531



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 187 ctcgtcgtcagggcccagaccgagcc 212
           |||||||||||||||||| |||||||
Sbjct: 270 ctcgtcgtcagggcccagtccgagcc 295
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>emb|X15691.1|HVLP60 Barley mRNA for chloroplast low molecular mass early
           light-inducible protein (ELIP) (clone HV60)
          Length = 764

 Score =  109 bits (55), Expect = 8e-21
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                       
Query: 341 tctgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggcca 400
           ||||||||||| | |||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 290 tctgggacgcgatggcgttcagcggccctgcgccggagcgcatcaacgggcggctagcca 349

                                  
Query: 401 tggtaggcttcgtggcggcgctg 423
           |||| ||||||||| ||||||||
Sbjct: 350 tggtgggcttcgtgacggcgctg 372



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 184 accctcgtcgtcagggcccagaccgag 210
           ||||||||||||||||| |||||||||
Sbjct: 217 accctcgtcgtcagggcacagaccgag 243



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 100 atggcgaccatggtggctttgagctccttcgccg 133
           |||||||||||| ||||  |||||||||||||||
Sbjct: 127 atggcgaccatgatggccatgagctccttcgccg 160
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>ref|XM_476845.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 564

 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Plus

                                                                       
Query: 343 tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
           ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 226 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 285

                                                               
Query: 403 gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcc 454
           || || |||||| |||||||  |||| |||||| |||| ||||| |||||||
Sbjct: 286 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcggggcggcgggctcc 337



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 187 ctcgtcgtcagggcccagaccgagcc 212
           |||||||||||||||||| |||||||
Sbjct: 97  ctcgtcgtcagggcccaggccgagcc 122
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>ref|XM_476844.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 603

 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Plus

                                                                       
Query: 343 tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
           ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 265 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 324

                                                               
Query: 403 gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcc 454
           || || |||||| |||||||  |||| |||||| |||| ||||| |||||||
Sbjct: 325 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcgcggcggcgggctcc 376



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 187 ctcgtcgtcagggcccagaccgagcc 212
           |||||||||||||||||| |||||||
Sbjct: 130 ctcgtcgtcagggcccaggccgagcc 155
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Plus

                                                                           
Query: 343     tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
               ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 4178496 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 4178555

                                                                   
Query: 403     gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcc 454
               || || |||||| |||||||  |||| |||||| |||| ||||| |||||||
Sbjct: 4178556 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcggggcggcgggctcc 4178607



 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Plus

                                                                           
Query: 343     tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
               ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 4176055 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 4176114

                                                                   
Query: 403     gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcc 454
               || || |||||| |||||||  |||| |||||| |||| ||||| |||||||
Sbjct: 4176115 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcgcggcggcgggctcc 4176166



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 187     ctcgtcgtcagggcccagaccgag 210
               |||||||||||||||||| |||||
Sbjct: 4178272 ctcgtcgtcagggcccaggccgag 4178295



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 187     ctcgtcgtcagggcccagaccgag 210
               |||||||||||||||||| |||||
Sbjct: 4175840 ctcgtcgtcagggcccaggccgag 4175863
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>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1361_E02
          Length = 100168

 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Plus

                                                                         
Query: 343   tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
             ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 62118 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 62177

                                                                 
Query: 403   gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcc 454
             || || |||||| |||||||  |||| |||||| |||| ||||| |||||||
Sbjct: 62178 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcggggcggcgggctcc 62229



 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Plus

                                                                         
Query: 343   tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
             ||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 59677 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcggctggcgatg 59736

                                                                 
Query: 403   gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcc 454
             || || |||||| |||||||  |||| |||||| |||| ||||| |||||||
Sbjct: 59737 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcgcggcggcgggctcc 59788



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 187   ctcgtcgtcagggcccagaccgag 210
             |||||||||||||||||| |||||
Sbjct: 61894 ctcgtcgtcagggcccaggccgag 61917



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 187   ctcgtcgtcagggcccagaccgag 210
             |||||||||||||||||| |||||
Sbjct: 59462 ctcgtcgtcagggcccaggccgag 59485
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>emb|X15692.1|HVLP90 Barley mRNA for chloroplast low molecular mass early
           light-inducible protein (ELIP) (clone HV90)
          Length = 660

 Score =  103 bits (52), Expect = 5e-19
 Identities = 79/88 (89%)
 Strand = Plus / Plus

                                                                       
Query: 335 cctcggtctgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggc 394
           ||||| ||||||||| | | |||||||||||||| |||||||||||||||||||| ||||
Sbjct: 203 cctcgatctgggacgagatggcgttcagcggccctgcgccggagcgcatcaacgggcggc 262

                                       
Query: 395 tggccatggtaggcttcgtggcggcgct 422
           | |||||||| ||||||||| |||||||
Sbjct: 263 tagccatggtgggcttcgtgacggcgct 290



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 176 gccggcgcaccctcgtcgtcagggcccagaccgag 210
           |||| ||| |||||||||||||||| |||||||||
Sbjct: 128 gccgacgcgccctcgtcgtcagggcacagaccgag 162
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>gb|AF365951.1|AF365951 Zea mays early light-inducible protein ELIP mRNA, complete cds;
           nuclear gene for chloroplast product
          Length = 852

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 83/94 (88%)
 Strand = Plus / Plus

                                                                       
Query: 341 tctgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggcca 400
           ||||||||||||| ||||||||||| || ||||||||||| |||||||| |||||||| |
Sbjct: 316 tctgggacgcgctggcgttcagcgggcccgcgccggagcggatcaacgggcggctggcga 375

                                             
Query: 401 tggtaggcttcgtggcggcgctgtccgtcgaggc 434
           |||| ||||||||| | |||||  ||||||||||
Sbjct: 376 tggtgggcttcgtgtccgcgctcgccgtcgaggc 409
to top
>dbj|AB019617.1| Triticum aestivum wcr (wheat cold-regulated) 12 mRNA for early
           light-inducible protein (ELIP), complete cds
          Length = 818

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                       
Query: 341 tctgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggcca 400
           ||||||||||||| |||||||||||||| |||||||||||||| || || || |||||||
Sbjct: 299 tctgggacgcgctggcgttcagcggccctgcgccggagcgcattaatgggcgcctggcca 358

                                 
Query: 401 tggtaggcttcgtggcggcgct 422
           |||| || |||||| |||||||
Sbjct: 359 tggtgggtttcgtgacggcgct 380



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 185 ccctcgtcgtcagggcccagaccg 208
           |||||||||||||||| |||||||
Sbjct: 227 ccctcgtcgtcagggcacagaccg 250
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                           
Query: 343     tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
               ||||||| ||| ||||||||||| |||||||||||||  |||||||| |||||||| |||
Sbjct: 9470816 tgggacgtgctggcgttcagcgggccggcgccggagccgatcaacgggcggctggcgatg 9470757

                                                     
Query: 403     gtaggcttcgtggcggcgctgtccgtcgaggcggcgcg 440
               || || |||||| |||||||  |||| |||||| ||||
Sbjct: 9470756 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcg 9470719
to top
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0006C08
          Length = 151987

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 84/98 (85%)
 Strand = Plus / Minus

                                                                         
Query: 343   tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
             ||||||| ||| ||||||||||| |||||||||||||  |||||||| |||||||| |||
Sbjct: 84377 tgggacgtgctggcgttcagcgggccggcgccggagccgatcaacgggcggctggcgatg 84318

                                                   
Query: 403   gtaggcttcgtggcggcgctgtccgtcgaggcggcgcg 440
             || || |||||| |||||||  |||| |||||| ||||
Sbjct: 84317 gtggggttcgtgtcggcgctcgccgtggaggcgtcgcg 84280
to top
>ref|XM_468708.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 669

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Plus

                                                                       
Query: 343 tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
           ||||||| ||| ||||||||||| |||||  ||||||| |||||||| |||||||| |||
Sbjct: 250 tgggacgtgctggcgttcagcgggccggcaacggagcggatcaacgggcggctggcgatg 309

                                                              
Query: 403 gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctc 453
           || || |||||| ||| |||  |||| |||||| |||||| ||||| ||||
Sbjct: 310 gtggggttcgtgccggtgctcgccgtggaggcgtcgcgtgacggtgagctc 360



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 187 ctcgtcgtcagggcccagaccgagcc 212
           |||||||||||||||||| |||||||
Sbjct: 130 ctcgtcgtcagggcccaggccgagcc 155
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                            
Query: 343      tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
                ||||||| ||| ||||||||||| |||||  ||||||| |||||||| |||||||| |||
Sbjct: 17148521 tgggacgtgctggcgttcagcgggccggcaacggagcggatcaacgggcggctggcgatg 17148462

                                                                   
Query: 403      gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctc 453
                || || |||||| ||| |||  |||| |||||| |||||| ||||| ||||
Sbjct: 17148461 gtggggttcgtgccggtgctcgccgtggaggcgtcgcgtgacggtgagctc 17148411



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 187      ctcgtcgtcagggcccagaccgag 210
                |||||||||||||||||| |||||
Sbjct: 17148744 ctcgtcgtcagggcccaggccgag 17148721
to top
>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
             sequence
          Length = 153247

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                         
Query: 343   tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
             ||||||| ||| ||||||||||| |||||  ||||||| |||||||| |||||||| |||
Sbjct: 39914 tgggacgtgctggcgttcagcgggccggcaacggagcggatcaacgggcggctggcgatg 39855

                                                                
Query: 403   gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctc 453
             || || |||||| ||| |||  |||| |||||| |||||| ||||| ||||
Sbjct: 39854 gtggggttcgtgccggtgctcgccgtggaggcgtcgcgtgacggtgagctc 39804



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 187   ctcgtcgtcagggcccagaccgag 210
             |||||||||||||||||| |||||
Sbjct: 40137 ctcgtcgtcagggcccaggccgag 40114
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                            
Query: 343      tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
                ||||||| ||| ||||||||||| |||||  ||||||| |||||||| |||||||| |||
Sbjct: 17142090 tgggacgtgctggcgttcagcgggccggcaacggagcggatcaacgggcggctggcgatg 17142031

                                                                   
Query: 403      gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctc 453
                || || |||||| ||| |||  |||| |||||| |||||| ||||| ||||
Sbjct: 17142030 gtggggttcgtgccggtgctcgccgtggaggcgtcgcgtgacggtgagctc 17141980



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 187      ctcgtcgtcagggcccagaccgag 210
                |||||||||||||||||| |||||
Sbjct: 17142313 ctcgtcgtcagggcccaggccgag 17142290
to top
>gb|AF017356.1|AF017356 Oryza sativa low molecular early light-inducible protein mRNA,
           complete cds
          Length = 818

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                       
Query: 343 tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
           ||||||| ||| ||||||| ||| ||||||||||| || |||||||| |||||||| |||
Sbjct: 330 tgggacgtgctggcgttcaacgggccggcgccggaacggatcaacgggcggctggcgatg 389

                               
Query: 403 gtaggcttcgtggcggcgct 422
           || || |||||| |||||||
Sbjct: 390 gtggggttcgtgtcggcgct 409



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 187 ctcgtcgtcagggcccagaccgagcc 212
           |||||||||||||||||| |||||||
Sbjct: 201 ctcgtcgtcagggcccaggccgagcc 226
to top
>gb|AF017357.1|AF017357 Oryza sativa low molecular early light-inducible protein mRNA,
           complete cds
          Length = 883

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 93/112 (83%), Gaps = 1/112 (0%)
 Strand = Plus / Plus

                                                                       
Query: 343 tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
           ||||||| ||| ||||||| ||| ||||||||||| || |||||||| |||||||| |||
Sbjct: 395 tgggacgtgctggcgttca-cgggccggcgccggaacggatcaacgggcggctggcgatg 453

                                                               
Query: 403 gtaggcttcgtggcggcgctgtccgtcgaggcggcgcgtggcggtgggctcc 454
           || || |||||| | |||||| |||| || ||| | || ||||| |||||||
Sbjct: 454 gtggggttcgtgtccgcgctggccgtggaagcgtctcgcggcggcgggctcc 505
to top
>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08,
              complete sequence
          Length = 142814

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                          
Query: 343    tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
              ||||||| ||| ||||||||||| |||||||||||||  |||||| | |||||||| |||
Sbjct: 137716 tgggacgtgctggcgttcagcgggccggcgccggagccgatcaacaggcggctggcgatg 137657

                         
Query: 403    gtaggcttcgt 413
              || || |||||
Sbjct: 137656 gtggggttcgt 137646
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                            
Query: 343      tgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggctggccatg 402
                ||||||| ||| ||||||||||| |||||||||||||  |||||| | |||||||| |||
Sbjct: 11129061 tgggacgtgctggcgttcagcgggccggcgccggagccgatcaacaggcggctggcgatg 11129002

                           
Query: 403      gtaggcttcgt 413
                || || |||||
Sbjct: 11129001 gtggggttcgt 11128991



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 430      gaggcggcgcgtggcggtgggctc 453
                ||||||||||||||||| ||||||
Sbjct: 26181865 gaggcggcgcgtggcggcgggctc 26181842
to top
>emb|AJ234846.1|HVU234846 Hordeum vulgare genomic DNA fragment; clone MWG2224
          Length = 393

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 172 ccgcgccggcgcaccctcgtcgtcagggcccagaccgag 210
           ||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 119 ccgcgtcggcgcgccctcctcgtcagggcccagaccgag 81



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 104 cgaccatggtggctttgagctccttcgccg 133
           |||||||||| || ||||||||||||||||
Sbjct: 193 cgaccatggttgccttgagctccttcgccg 164
to top
>ref|XM_511771.1| PREDICTED: Pan troglodytes similar to beta-tubulin cofactor D
            (LOC455000), mRNA
          Length = 21183

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 99   gatggcgaccatggtggctttg 120
            ||||||||||||||||||||||
Sbjct: 6852 gatggcgaccatggtggctttg 6873
to top
>gb|AC163033.4| Mus musculus BAC clone RP23-432F6 from chromosome 12, complete sequence
          Length = 201510

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 203   agaccgagcctgacatggact 223
             |||||||||||||||||||||
Sbjct: 94986 agaccgagcctgacatggact 94966
to top
>gb|AC007000.2| Homo sapiens BAC clone RP11-467H10 from 7, complete sequence
          Length = 196660

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 52     caccttctctagttctcttct 72
              |||||||||||||||||||||
Sbjct: 105574 caccttctctagttctcttct 105554
to top
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 348     cgcgctcgcgttcagcggcccggcg 372
               |||||||||||||| ||||||||||
Sbjct: 2577378 cgcgctcgcgttcaacggcccggcg 2577354
to top
>gb|AC098851.5| Homo sapiens BAC clone RP13-574L22 from 7, complete sequence
          Length = 161470

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 52    caccttctctagttctcttct 72
             |||||||||||||||||||||
Sbjct: 12059 caccttctctagttctcttct 12039
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 231     ggagacgacgagcgcgtcgac 251
               |||||||||||||||||||||
Sbjct: 2657352 ggagacgacgagcgcgtcgac 2657332
to top
>gb|AY847686.1| Dunaliella salina chloroplast carotene biosynthesis related protein
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 986

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 381 catcaacggccggctggccatggtaggcttcgt 413
           |||||||||||| ||||||||| | ||||||||
Sbjct: 319 catcaacggccgcctggccatgttgggcttcgt 351
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 281     cgtccccgaccccgatcccggcagc 305
               |||||||| ||||||||||||||||
Sbjct: 3367129 cgtccccgcccccgatcccggcagc 3367153
to top
>gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940135D9, complete sequence
          Length = 93659

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 379   cgcatcaacggccggctggc 398
             ||||||||||||||||||||
Sbjct: 85127 cgcatcaacggccggctggc 85108
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 379     cgcatcaacggccggctggccatg 402
               ||||||||||||| ||||||||||
Sbjct: 2235462 cgcatcaacggcctgctggccatg 2235485
to top
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome
          Length = 2127839

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 97      gtgatggcgaccatggtggc 116
               ||||||||||||||||||||
Sbjct: 1653246 gtgatggcgaccatggtggc 1653265
to top
>emb|AJ578506.1|EGU578506 Elaeis guineensis microsatellite DNA, clone mEgCIR0195
          Length = 272

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 53 accttctctagttctcttct 72
          ||||||||||||||||||||
Sbjct: 95 accttctctagttctcttct 76
to top
>emb|X61361.1|EGLHCAB E.gracilis gene for light harvesting chlorophyll a/b binding protein
            of photosystem II
          Length = 7650

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 385  aacggccggctggccatggt 404
            ||||||||||||||||||||
Sbjct: 6983 aacggccggctggccatggt 7002



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 aacggccggctggccatggt 404
           ||||||||||||||||||||
Sbjct: 199 aacggccggctggccatggt 218
to top
>gb|AE014266.1| Streptococcus agalactiae 2603V/R section 76 of 100 of the complete
             genome
          Length = 23817

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    gtgatggcgaccatggtggc 116
             ||||||||||||||||||||
Sbjct: 22074 gtgatggcgaccatggtggc 22093
to top
>emb|AL663010.4|OSJN00211 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065J09,
             complete sequence
          Length = 117443

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 430   gaggcggcgcgtggcggtgggctc 453
             ||||||||||||||||| ||||||
Sbjct: 69050 gaggcggcgcgtggcggcgggctc 69027
to top
>emb|AL766852.1|SAG766852 Streptococcus agalactiae NEM316 complete genome, segment 10
          Length = 174050

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     gtgatggcgaccatggtggc 116
              ||||||||||||||||||||
Sbjct: 128730 gtgatggcgaccatggtggc 128749
to top
>gb|AE005871.1| Caulobacter crescentus CB15 section 197 of 359 of the complete genome
          Length = 10070

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 415  gcggcgctgtccgtcgaggcggcg 438
            ||||||||| ||||||||||||||
Sbjct: 5127 gcggcgctggccgtcgaggcggcg 5104
to top
>emb|AL121750.22|HSJ323A24 Human DNA sequence from clone RP3-323A24 on chromosome 4, complete
              sequence
          Length = 149969

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    cagggcccagaccgagcctg 214
              ||||||||||||||||||||
Sbjct: 107337 cagggcccagaccgagcctg 107356
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 187      ctcgtcgtcagggcccagaccgag 210
                |||||||||||||||||| |||||
Sbjct: 25697531 ctcgtcgtcagggcccaggccgag 25697508



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 280     ccgtccccgaccccgatccc 299
               ||||||||||||||||||||
Sbjct: 6809236 ccgtccccgaccccgatccc 6809217
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     gccggcgcaccctcgtcgtc 195
               ||||||||||||||||||||
Sbjct: 2354999 gccggcgcaccctcgtcgtc 2354980
to top
>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0458E02
          Length = 154458

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 187    ctcgtcgtcagggcccagaccgag 210
              |||||||||||||||||| |||||
Sbjct: 120976 ctcgtcgtcagggcccaggccgag 120953
to top
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0525F01
          Length = 151668

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    ccgtccccgaccccgatccc 299
              ||||||||||||||||||||
Sbjct: 138915 ccgtccccgaccccgatccc 138896
to top
>emb|AJ414383.1|RSO414383 Ralstonia solanacearum partial mutS gene
          Length = 2088

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 375 ggagcgcatcaacggccggctggc 398
           ||||||||||| ||||||||||||
Sbjct: 963 ggagcgcatcaccggccggctggc 986
to top
>dbj|AK120621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152E17, full
           insert sequence
          Length = 1872

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 280 ccgtccccgaccccgatccc 299
           ||||||||||||||||||||
Sbjct: 51  ccgtccccgaccccgatccc 70
to top
>dbj|AK072084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116A15, full
           insert sequence
          Length = 1872

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 280 ccgtccccgaccccgatccc 299
           ||||||||||||||||||||
Sbjct: 51  ccgtccccgaccccgatccc 70
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 375     ggagcgcatcaacggccggctggc 398
               ||||||||||| ||||||||||||
Sbjct: 1208776 ggagcgcatcaccggccggctggc 1208753
to top
>emb|Z54072.1|HSL261H12 Human DNA sequence from clone LA04NC01-261H12 on chromosome 4, complete
             sequence
          Length = 40198

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   cagggcccagaccgagcctg 214
             ||||||||||||||||||||
Sbjct: 26066 cagggcccagaccgagcctg 26085


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,899,891
Number of Sequences: 3902068
Number of extensions: 2899891
Number of successful extensions: 57680
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56887
Number of HSP's gapped (non-prelim): 793
length of query: 454
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 432
effective length of database: 17,147,199,772
effective search space: 7407590301504
effective search space used: 7407590301504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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