ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet72c12 |
|---|---|
| Clone Library Name | barley_pub |
>NLTPX_ORYSA (P83210) Nonspecific lipid-transfer protein 2 (nsLTP2) (7 kDa lipid| transfer protein) Length = 69 Score = 83.6 bits (205), Expect = 1e-16 Identities = 33/56 (58%), Positives = 42/56 (75%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTL 319 CNAG LTVC G I G P+ CC++L+ Q+GCFCQFA++P Y Y+NSPNARK + Sbjct: 3 CNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAV 58
>NLT2G_WHEAT (P82900) Nonspecific lipid-transfer protein 2G (LTP2G) (Lipid| transfer protein 2 isoform 1) (LTP2-1) (7 kDa lipid transfer protein 1) Length = 67 Score = 77.0 bits (188), Expect = 1e-14 Identities = 32/56 (57%), Positives = 39/56 (69%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTL 319 C A L VCA I+SG PS CC NL+ Q+GCFCQ+A++P Y YI SP+AR TL Sbjct: 2 CQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTL 57
>NLT2P_WHEAT (P82901) Nonspecific lipid-transfer protein 2P (LTP2P) (Lipid| transfer protein 2 isoform 2) (LTP2-2) (7 kDa lipid transfer protein 2) Length = 67 Score = 73.9 bits (180), Expect = 9e-14 Identities = 31/56 (55%), Positives = 38/56 (67%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTL 319 C A L VCA I+SG PS CC NL+ Q+ CFCQ+A++P Y YI SP+AR TL Sbjct: 2 CQASQLAVCASAILSGAKPSGECCGNLRAQQPCFCQYAKDPTYGQYIRSPHARDTL 57
>NLTP2_HORVU (P20145) Probable nonspecific lipid-transfer protein precursor| (LTP) (Aleurone-specific 10 kDa protein) (B-FABP) Length = 102 Score = 70.5 bits (171), Expect = 1e-12 Identities = 28/56 (50%), Positives = 37/56 (66%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTL 319 C L VCA I+ GT PS CC NL+ Q+GC CQ+ ++P Y Y++SP+AR TL Sbjct: 37 CEPAQLAVCASAILGGTKPSGECCGNLRAQQGCLCQYVKDPNYGHYVSSPHARDTL 92
>NLTP2_MAIZE (P83506) Probable nonspecific lipid-transfer protein 2 (LTP 2)| Length = 70 Score = 65.5 bits (158), Expect = 3e-11 Identities = 27/54 (50%), Positives = 34/54 (62%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARK 313 CN LT CAGP + G CCA L+ Q+GC C +AR+P Y +YI SPNA + Sbjct: 4 CNPAQLTPCAGPALFGGAVPPACCAQLRAQQGCLCGYARSPNYGSYIRSPNAAR 57
>NLTP2_PRUAR (P82353) Nonspecific lipid-transfer protein 2 (LTP 2)| Length = 68 Score = 62.4 bits (150), Expect = 3e-10 Identities = 26/54 (48%), Positives = 33/54 (61%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARK 313 C+ L+ C GPI SG TCC L+ QR C C + +NP+ Y+NSPNARK Sbjct: 3 CSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARK 56
>NLTP_VIGUN (Q43681) Probable nonspecific lipid-transfer protein AKCS9| precursor (LTP) Length = 99 Score = 62.4 bits (150), Expect = 3e-10 Identities = 25/56 (44%), Positives = 33/56 (58%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANLKNQRGCFCQFARNPAYSTYINSPNARKTL 319 CN L+ C I G+ PS TCC+ LK Q C C + +NP+ Y+NSP A+K L Sbjct: 34 CNPTELSSCVPAITGGSKPSSTCCSKLKVQEPCLCNYIKNPSLKQYVNSPGAKKVL 89
>NLTP2_WHEAT (P39085) Nonspecific lipid-transfer protein 2 (LTP 2) (W-FABP)| (Fragment) Length = 28 Score = 35.0 bits (79), Expect = 0.047 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTMPSQTCCANL 232 C L VCA I+ GT PS CC NL Sbjct: 2 CEVTQLAVCASAILGGTKPSGECCGNL 28
>MEN8_SILLA (O24356) MEN-8 protein precursor| Length = 100 Score = 31.2 bits (69), Expect = 0.68 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 4/40 (10%) Frame = +2 Query: 161 GSLTVCAGPIISG---TMPSQTCCANLKN-QRGCFCQFAR 268 G+L VCA ++ G T PSQ CCA L C C R Sbjct: 43 GNLNVCAPYVVPGAVNTNPSQECCAALSGVNHDCMCNTLR 82
>FER2_APHSA (P00251) Ferredoxin-2 (Ferredoxin II)| Length = 99 Score = 30.8 bits (68), Expect = 0.89 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTMPSQ 214 C AGS + CAG ++SG P+Q Sbjct: 41 CRAGSCSTCAGKLVSGAAPNQ 61
>SUS2_SOLTU (P49039) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (SS65) Length = 805 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 4/35 (11%) Frame = +1 Query: 187 DH*RDHAVADVLRQPKE----PAWVLLPVRAQPGV 279 D DHA +VL+ +E P WV L +R +PGV Sbjct: 60 DKLNDHAFEEVLKSTQEAIVLPPWVALAIRLRPGV 94
>SUS3_ORYSA (Q43009) Sucrose synthase 3 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 3) Length = 816 Score = 29.6 bits (65), Expect = 2.0 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%) Frame = +1 Query: 196 RDHAVADVLRQPKE----PAWVLLPVRAQPGV 279 +D A+ DVLR +E P W+ L +R +PGV Sbjct: 68 KDSALEDVLRGAQEAIVIPPWIALAIRPRPGV 99
>SUS2_MAIZE (P49036) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 816 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 4/32 (12%) Frame = +1 Query: 196 RDHAVADVLRQPKE----PAWVLLPVRAQPGV 279 +D A DVLR +E P WV L +R +PGV Sbjct: 68 KDGAFEDVLRAAQEAIVIPPWVALAIRPRPGV 99
>SUSY_VICFA (P31926) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 806 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 4/31 (12%) Frame = +1 Query: 199 DHAVADVLRQPKE----PAWVLLPVRAQPGV 279 D A +VLR +E P WV L VR +PGV Sbjct: 64 DGAFGEVLRSTQEAIVLPPWVALAVRPRPGV 94
>RAIN_HUMAN (Q5U651) Ras-interacting protein 1 (Rain)| Length = 963 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = -2 Query: 247 PTLVL*VGAARLRRHGPANDRASAHREAPRV 155 P L+L +G++RLR GP D A HRE R+ Sbjct: 908 PPLILPLGSSRLRLTGPVTDDA-LHRELRRL 937
>FER1_SYNP2 (P31965) Ferredoxin-1 (Ferredoxin I)| Length = 96 Score = 28.1 bits (61), Expect = 5.8 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTM 205 C AG+ + CAG I+SGT+ Sbjct: 39 CRAGACSTCAGKIVSGTV 56
>FER1_NOSMU (P00252) Ferredoxin-1 (Ferredoxin I)| Length = 98 Score = 28.1 bits (61), Expect = 5.8 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTM 205 C AG+ + CAG I+SGT+ Sbjct: 41 CRAGACSTCAGKIVSGTV 58
>SUSY_ALNGL (P49034) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 803 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 4/31 (12%) Frame = +1 Query: 199 DHAVADVLRQPKE----PAWVLLPVRAQPGV 279 D A +VLR +E P WV L VR +PGV Sbjct: 64 DGAFGEVLRSAQEAIVLPPWVALAVRPRPGV 94
>RAIN_MOUSE (Q3U0S6) Ras-interacting protein 1 (Rain)| Length = 961 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = -2 Query: 247 PTLVL*VGAARLRRHGPANDRASAHREAPRV 155 P L+L +G++RLR GP D A HRE R+ Sbjct: 906 PPLILPLGSSRLRLTGPVTDDA-LHRELRRL 935
>SUSY_SOYBN (P13708) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (Nodulin-100) Length = 805 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 4/31 (12%) Frame = +1 Query: 199 DHAVADVLRQPKE----PAWVLLPVRAQPGV 279 D A +VLR +E P WV L VR +PGV Sbjct: 64 DGAFGEVLRSTQEAIVLPPWVALAVRPRPGV 94
>SUSY_PHAAU (Q01390) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 805 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 4/31 (12%) Frame = +1 Query: 199 DHAVADVLRQPKE----PAWVLLPVRAQPGV 279 D A +VLR +E P WV L VR +PGV Sbjct: 64 DGAFGEVLRSTQEAIVLPPWVALAVRPRPGV 94
>ERG25_PONPY (Q5R574) C-4 methylsterol oxidase (EC 1.14.13.72) (Methylsterol| monooxygenase) Length = 293 Score = 28.1 bits (61), Expect = 5.8 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = -3 Query: 282 EYAGLRANWQKHPRWFFRLAQ 220 EY + +W++ PRW+F LA+ Sbjct: 121 EYFNIPYDWERMPRWYFLLAR 141
>ERG25_HUMAN (Q15800) C-4 methylsterol oxidase (EC 1.14.13.72) (Methylsterol| monooxygenase) Length = 293 Score = 28.1 bits (61), Expect = 5.8 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = -3 Query: 282 EYAGLRANWQKHPRWFFRLAQ 220 EY + +W++ PRW+F LA+ Sbjct: 121 EYFNIPYDWERMPRWYFLLAR 141
>TIMP2_CANFA (Q9TTY1) Metalloproteinase inhibitor 2 precursor (TIMP-2) (Tissue| inhibitor of metalloproteinases-2) Length = 220 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = +2 Query: 167 LTVCAGPIISGTMPS-QTCCANLKNQRGCFCQFARNPAYSTYINSPN 304 +T+C + T+ S Q N + Q GC C+ R P YI+SP+ Sbjct: 124 ITLCDFIVPWDTLSSTQKKSLNHRYQMGCECKITRCPMIPCYISSPD 170
>FER_APHSA (P00250) Ferredoxin-1 (Ferredoxin I)| Length = 96 Score = 27.7 bits (60), Expect = 7.5 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTMPSQ 214 C AG+ + CAG ++SG P + Sbjct: 39 CRAGACSTCAGKLVSGPAPDE 59
>FER_MASLA (P00248) Ferredoxin| Length = 98 Score = 27.7 bits (60), Expect = 7.5 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTM 205 C AG+ + CAG +ISGT+ Sbjct: 41 CRAGACSTCAGKLISGTV 58
>FER1_SYNP7 (P0A3D2) Ferredoxin-1 (Ferredoxin I)| Length = 98 Score = 27.7 bits (60), Expect = 7.5 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTM 205 C AG+ + CAG ++SGT+ Sbjct: 41 CRAGACSTCAGKVVSGTV 58
>FER1_SYNP6 (P0A3D3) Ferredoxin-1 (Ferredoxin I)| Length = 98 Score = 27.7 bits (60), Expect = 7.5 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTM 205 C AG+ + CAG ++SGT+ Sbjct: 41 CRAGACSTCAGKVVSGTV 58
>FER1_CYACA (Q9TLW0) Ferredoxin| Length = 98 Score = 27.7 bits (60), Expect = 7.5 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTM 205 C AG+ + CAG +ISGT+ Sbjct: 41 CRAGACSTCAGKLISGTV 58
>SUSY_MEDSA (O65026) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 805 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 4/31 (12%) Frame = +1 Query: 199 DHAVADVLRQPKE----PAWVLLPVRAQPGV 279 D A +VLR +E P WV L VR +PG+ Sbjct: 64 DGAFGEVLRSTQEAIVLPPWVALAVRPRPGI 94
>SUSY_LYCES (P49037) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 805 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%) Frame = +1 Query: 187 DH*RDHAVADVLRQPKE----PAWVLLPVRAQPGV 279 D +HA ++L+ +E P WV L +R +PGV Sbjct: 60 DKLNEHAFEELLKSTQEAIVLPPWVALAIRLRPGV 94
>FER_NOSMU (P00253) Ferredoxin| Length = 98 Score = 27.3 bits (59), Expect = 9.9 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTM 205 C AG+ + CAG ++SGT+ Sbjct: 41 CRAGACSTCAGKLVSGTV 58
>FER_BUMFI (P13106) Ferredoxin| Length = 98 Score = 27.3 bits (59), Expect = 9.9 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTM 205 C AG+ + CAG ++SGT+ Sbjct: 41 CRAGACSTCAGKVLSGTI 58
>FER1_ANAVT (P00254) Ferredoxin-1 (Ferredoxin I)| Length = 98 Score = 27.3 bits (59), Expect = 9.9 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTM 205 C AG+ + CAG ++SGT+ Sbjct: 41 CRAGACSTCAGKLVSGTV 58
>FER1_ANASP (P0A3C7) Ferredoxin-1 (Ferredoxin I)| Length = 98 Score = 27.3 bits (59), Expect = 9.9 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTM 205 C AG+ + CAG ++SGT+ Sbjct: 41 CRAGACSTCAGKLVSGTV 58
>FER1_ANASO (P0A3C8) Ferredoxin-1 (Ferredoxin I)| Length = 98 Score = 27.3 bits (59), Expect = 9.9 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +2 Query: 152 CNAGSLTVCAGPIISGTM 205 C AG+ + CAG ++SGT+ Sbjct: 41 CRAGACSTCAGKLVSGTV 58
>SUS1_SOLTU (P10691) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (SS16) Length = 805 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 4/31 (12%) Frame = +1 Query: 199 DHAVADVLRQPKE----PAWVLLPVRAQPGV 279 +HA ++L+ +E P WV L +R +PGV Sbjct: 64 EHAFEELLKSTQEAIVLPPWVALAIRLRPGV 94 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,958,503 Number of Sequences: 219361 Number of extensions: 577963 Number of successful extensions: 1596 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 1562 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1584 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
