ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet72c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CI106_HUMAN (Q8NAJ2) Hypothetical protein C9orf106 30 3.5
2AGLU_ASPNG (P56526) Alpha-glucosidase precursor (EC 3.2.1.20) (M... 29 5.9
3BGLS_KLUMA (P07337) Beta-glucosidase precursor (EC 3.2.1.21) (Ge... 29 5.9
4PLCB1_MOUSE (Q9Z1B3) 1-phosphatidylinositol-4,5-bisphosphate pho... 29 5.9
5AROB_SILPO (Q5LSX9) 3-dehydroquinate synthase (EC 4.2.3.4) 29 5.9
6ARMX2_MOUSE (Q6A058) Armadillo repeat-containing X-linked protein 2 28 7.7
7HEM3_LEIXX (Q6AHF1) Porphobilinogen deaminase (EC 2.5.1.61) (PBG... 28 7.7
8ACBD4_PONPY (Q5R7P6) Acyl-CoA-binding domain-containing protein 4 28 7.7
9RP3A_HUMAN (Q9Y2J0) Rabphilin-3A (Exophilin-1) 28 7.7
10UL81_HCMVA (P16825) Hypothetical protein UL81 28 7.7
11PLCB1_RAT (P10687) 1-phosphatidylinositol-4,5-bisphosphate phosp... 28 7.7

>CI106_HUMAN (Q8NAJ2) Hypothetical protein C9orf106|
          Length = 232

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = -2

Query: 402 DTGTTLDGSWPGHGALEAAL*SWATQ--SAPWRSAARG-TLKAPVRSRPP 262
           D G+ ++ SWP H  LE A  SW     S   R A RG +L + +R+  P
Sbjct: 126 DPGSQVEPSWPWHPGLEQAAASWVGNHVSPAHRQALRGHSLGSALRALMP 175



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>AGLU_ASPNG (P56526) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)|
          Length = 985

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = +2

Query: 287 FSVPLAADLHGADCVAQL---HSAASNAPCPGQEPSKVVPVSEGAT 415
           F++P +AD+ GA  +A +    +A + + CPG + SKV   S G T
Sbjct: 35  FTIPASADV-GAQLIANIDDPQAADAQSVCPGYKASKVQHNSRGFT 79



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>BGLS_KLUMA (P07337) Beta-glucosidase precursor (EC 3.2.1.21) (Gentiobiase)|
           (Cellobiase) (Beta-D-glucoside glucohydrolase)
          Length = 845

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = +2

Query: 239 GEYESKAVGGLDRTGAFSVPLAADLHGADCVAQLHSAASNAPCPGQEPSKVVPVS 403
           G Y  K++GGL  +        AD   A  +A+ +S         +EP  V  V+
Sbjct: 384 GAYSHKSIGGLAESSLIDAAKPADAENAGLIAKFYSNPVEERSEDEEPFHVTKVN 438



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>PLCB1_MOUSE (Q9Z1B3) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase|
           beta 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C)
           (Phospholipase C-beta-1) (PLC-beta-1) (PLC-I) (PLC-154)
          Length = 1216

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = -2

Query: 432 PGTTPNVAPSDTGTTLDGSWPGHGALEAAL*SWATQSAPWRSAARGTLKAPVRS 271
           PG T + APS+T TT   +   H    A+L       AP    A G++KAP ++
Sbjct: 844 PGETSSEAPSETRTTPAENGVNH---TASLAPKPPSQAPHSQPAPGSVKAPAKT 894



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>AROB_SILPO (Q5LSX9) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 370

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
 Frame = -2

Query: 366 HGALEAAL*SWATQSAPWRSAARGTLKAPVRSRPPTALLSYSPWTSLHLIATRRRLKASS 187
           H AL A   S+  +  P   A  G   AP+ +R   A+L+     +LHL A R  L A  
Sbjct: 6   HVALGAR--SYDVEIGPGLIAEAGARIAPLLARKRVAVLTDETVAALHLEALREGLAAGG 63

Query: 186 AFMSFLVQP---AHLAWP 142
             M  L  P   +   WP
Sbjct: 64  VTMEALALPPGESTKGWP 81



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>ARMX2_MOUSE (Q6A058) Armadillo repeat-containing X-linked protein 2|
          Length = 784

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
 Frame = -2

Query: 435 APGTTPN----VAPSDTGTTLDGSWPGHGALEAAL*SWATQSAPWRSAARGTLKAPVRSR 268
           AP TT       AP  T + +    PG       + S    + PW  A  G +++P  + 
Sbjct: 166 APSTTEASGAVAAPGPTVSPMIAQTPGPVVPSPTIVSTGPAAIPWAVAHPGAVQSPGPAV 225

Query: 267 PPTALLSYSP 238
           PP A+ S  P
Sbjct: 226 PPMAVQSLVP 235



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>HEM3_LEIXX (Q6AHF1) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 329

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +2

Query: 236 HGEYESKAVGGLDRTGAFSVPLAADLHGADCVAQLHSAAS--NAPCPG 373
           HG+   +++  L  TG F+  L   L   +C   +HS      AP PG
Sbjct: 52  HGDTSRESLSELGGTGVFATALRDALRNGECDLVVHSLKDLPTAPAPG 99



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>ACBD4_PONPY (Q5R7P6) Acyl-CoA-binding domain-containing protein 4|
          Length = 269

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -2

Query: 354 EAAL*SWATQSAPWRSAARGTLKAPVRSRPPTALLSYS 241
           EAA  +  +  APW   AR  L  PV  R P AL + S
Sbjct: 217 EAAAQAQCSAMAPWAPRARAALLPPVALRRPVALPNVS 254



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>RP3A_HUMAN (Q9Y2J0) Rabphilin-3A (Exophilin-1)|
          Length = 694

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
 Frame = -2

Query: 432 PGTTPNVAPSDTGTTLD---------GSWPGHGALEAAL*SWATQSAPWRSAARGTLKAP 280
           P   P VAPSD GTT           G +P  GA E  +   +  S P+  A+    +  
Sbjct: 311 PDQKPEVAPSDPGTTAPPREERTGGVGGYPAVGAREDRM---SHPSGPYSQASAAAPQPA 367

Query: 279 VRSRPP 262
              +PP
Sbjct: 368 AARQPP 373



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>UL81_HCMVA (P16825) Hypothetical protein UL81|
          Length = 116

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 278 TGAFSVPL-AADLHGADCVAQLHSAASNAPCPGQEPSKVVPVSEGATFGVVPGAK 439
           T  + +PL  A    A CV +  SAA   PCP  +P    P+   A   V P ++
Sbjct: 4   TPHYDLPLICAATWTATCVPRQTSAARCGPCPRHDPHPSAPLPLPAPHAVDPASR 58



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>PLCB1_RAT (P10687) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase|
           beta 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C)
           (Phospholipase C-beta-1) (PLC-beta-1) (PLC-I) (PLC-154)
          Length = 1216

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = -2

Query: 432 PGTTPNVAPSDTGTTLDGSWPGHGALEAAL*SWATQSAPWRSAARGTLKAPVRS 271
           PG T + APS+T TT   +   H    A L       AP    A G++KAP ++
Sbjct: 844 PGETSSEAPSETRTTPAENGVNH---TATLAPKPPSQAPHSQPAPGSVKAPAKT 894


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.130    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,745,796
Number of Sequences: 219361
Number of extensions: 568831
Number of successful extensions: 1485
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1484
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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