| Clone Name | baet72b09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem II Length = 1217 Score = 474 bits (239), Expect = e-131 Identities = 282/295 (95%), Gaps = 1/295 (0%) Strand = Plus / Plus Query: 22 tcccgcgtaccaagcccaccgaccaacatggcagcgtctctccaagccgcggccacgctg 81 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 2 tcccgcgtaccaagcc-accgaccaacatggcagcgtctctccaagccgcggccaccgtg 60 Query: 82 atgccggccaagatcggcggccgggcctcctccgtgcggccgtcgtcgcacgtcgcccgg 141 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 61 atgccggccaagatcggcggccgggcctcctccgcgcgaccgtcgtcgcacgtcgcccgg 120 Query: 142 gcgttcggcgtcgacgctgccgccaggatcacgtgctccctgcaatccgacatcagggag 201 ||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||| Sbjct: 121 gcgttcggcgtcgacgctggcgccaggatcacctgctccctgcagtccgacatcagggag 180 Query: 202 gtcgcaagcaagtgcgccgacgccgccaagatggccggcttcgccctcgcaacctctgcc 261 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 181 gtcgcaagcaagtgcgccgacgccgccaagatggccggcttcgccctcgccacctctgcc 240 Query: 262 ctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacg 316 ||||||||||| ||||| | |||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctcgtctccggcgcgacggcggagggggcgcccaagaggctgaccttcgacg 295
>ref|NM_193698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1002 Score = 172 bits (87), Expect = 4e-40 Identities = 173/202 (85%), Gaps = 6/202 (2%) Strand = Plus / Plus Query: 121 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 174 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 88 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 147 Query: 175 tgctccctgcaatccgacatcagggaggtcgcaagcaagtgcgccgacgccgccaagatg 234 ||||||||||| ||||||||| |||||||||| | |||||||||||| ||||||||| | Sbjct: 148 tgctccctgcagtccgacatccgggaggtcgccaacaagtgcgccgatgccgccaagctc 207 Query: 235 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 294 ||||||||||||||||| ||||| || || |||||||| ||||| || |||||||| | | Sbjct: 208 gccggcttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtg 267 Query: 295 cccaagaggctgaccttcgacg 316 || | |||||| |||||||||| Sbjct: 268 ccgaggaggcttaccttcgacg 289 Score = 79.8 bits (40), Expect = 5e-12 Identities = 63/70 (90%), Gaps = 3/70 (4%) Strand = Plus / Plus Query: 49 atggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggccgg 105 |||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||||| Sbjct: 1 atggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggccgg 60 Query: 106 gcctcctccg 115 |||||||||| Sbjct: 61 gcctcctccg 70
>dbj|AK119515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-D11, full insert sequence Length = 1286 Score = 172 bits (87), Expect = 4e-40 Identities = 173/202 (85%), Gaps = 6/202 (2%) Strand = Plus / Plus Query: 121 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 174 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 153 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 212 Query: 175 tgctccctgcaatccgacatcagggaggtcgcaagcaagtgcgccgacgccgccaagatg 234 ||||||||||| ||||||||| |||||||||| | |||||||||||| ||||||||| | Sbjct: 213 tgctccctgcagtccgacatccgggaggtcgccaacaagtgcgccgatgccgccaagctc 272 Query: 235 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 294 ||||||||||||||||| ||||| || || |||||||| ||||| || |||||||| | | Sbjct: 273 gccggcttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtg 332 Query: 295 cccaagaggctgaccttcgacg 316 || | |||||| |||||||||| Sbjct: 333 ccgaggaggcttaccttcgacg 354 Score = 83.8 bits (42), Expect = 3e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 47 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 103 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 64 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 123 Query: 104 gggcctcctccg 115 |||||||||||| Sbjct: 124 gggcctcctccg 135
>dbj|AK119188.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G10, full insert sequence Length = 1217 Score = 172 bits (87), Expect = 4e-40 Identities = 173/202 (85%), Gaps = 6/202 (2%) Strand = Plus / Plus Query: 121 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 174 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 160 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 219 Query: 175 tgctccctgcaatccgacatcagggaggtcgcaagcaagtgcgccgacgccgccaagatg 234 ||||||||||| ||||||||| |||||||||| | |||||||||||| ||||||||| | Sbjct: 220 tgctccctgcagtccgacatccgggaggtcgccaacaagtgcgccgatgccgccaagctc 279 Query: 235 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 294 ||||||||||||||||| ||||| || || |||||||| ||||| || |||||||| | | Sbjct: 280 gccggcttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtg 339 Query: 295 cccaagaggctgaccttcgacg 316 || | |||||| |||||||||| Sbjct: 340 ccgaggaggcttaccttcgacg 361 Score = 83.8 bits (42), Expect = 3e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 47 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 103 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 71 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 130 Query: 104 gggcctcctccg 115 |||||||||||| Sbjct: 131 gggcctcctccg 142
>dbj|AK104760.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G12, full insert sequence Length = 1292 Score = 172 bits (87), Expect = 4e-40 Identities = 173/202 (85%), Gaps = 6/202 (2%) Strand = Plus / Plus Query: 121 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 174 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 157 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 216 Query: 175 tgctccctgcaatccgacatcagggaggtcgcaagcaagtgcgccgacgccgccaagatg 234 ||||||||||| ||||||||| |||||||||| | |||||||||||| ||||||||| | Sbjct: 217 tgctccctgcagtccgacatccgggaggtcgccaacaagtgcgccgatgccgccaagctc 276 Query: 235 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 294 ||||||||||||||||| ||||| || || |||||||| ||||| || |||||||| | | Sbjct: 277 gccggcttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtg 336 Query: 295 cccaagaggctgaccttcgacg 316 || | |||||| |||||||||| Sbjct: 337 ccgaggaggcttaccttcgacg 358 Score = 83.8 bits (42), Expect = 3e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 47 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 103 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 68 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 127 Query: 104 gggcctcctccg 115 |||||||||||| Sbjct: 128 gggcctcctccg 139
>dbj|AK104649.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B02, full insert sequence Length = 1272 Score = 172 bits (87), Expect = 4e-40 Identities = 173/202 (85%), Gaps = 6/202 (2%) Strand = Plus / Plus Query: 121 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 174 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 137 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 196 Query: 175 tgctccctgcaatccgacatcagggaggtcgcaagcaagtgcgccgacgccgccaagatg 234 ||||||||||| ||||||||| |||||||||| | |||||||||||| ||||||||| | Sbjct: 197 tgctccctgcagtccgacatccgggaggtcgccaacaagtgcgccgatgccgccaagctc 256 Query: 235 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 294 ||||||||||||||||| ||||| || || |||||||| ||||| || |||||||| | | Sbjct: 257 gccggcttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtg 316 Query: 295 cccaagaggctgaccttcgacg 316 || | |||||| |||||||||| Sbjct: 317 ccgaggaggcttaccttcgacg 338 Score = 83.8 bits (42), Expect = 3e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 47 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 103 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 48 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 107 Query: 104 gggcctcctccg 115 |||||||||||| Sbjct: 108 gggcctcctccg 119
>dbj|AK103937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G02, full insert sequence Length = 1290 Score = 172 bits (87), Expect = 4e-40 Identities = 173/202 (85%), Gaps = 6/202 (2%) Strand = Plus / Plus Query: 121 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 174 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 157 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 216 Query: 175 tgctccctgcaatccgacatcagggaggtcgcaagcaagtgcgccgacgccgccaagatg 234 ||||||||||| ||||||||| |||||||||| | |||||||||||| ||||||||| | Sbjct: 217 tgctccctgcagtccgacatccgggaggtcgccaacaagtgcgccgatgccgccaagctc 276 Query: 235 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 294 ||||||||||||||||| ||||| || || |||||||| ||||| || |||||||| | | Sbjct: 277 gccggcttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtg 336 Query: 295 cccaagaggctgaccttcgacg 316 || | |||||| |||||||||| Sbjct: 337 ccgaggaggcttaccttcgacg 358 Score = 83.8 bits (42), Expect = 3e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 47 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 103 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 68 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 127 Query: 104 gggcctcctccg 115 |||||||||||| Sbjct: 128 gggcctcctccg 139
>dbj|AK103920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B04, full insert sequence Length = 1313 Score = 172 bits (87), Expect = 4e-40 Identities = 173/202 (85%), Gaps = 6/202 (2%) Strand = Plus / Plus Query: 121 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 174 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 140 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 199 Query: 175 tgctccctgcaatccgacatcagggaggtcgcaagcaagtgcgccgacgccgccaagatg 234 ||||||||||| ||||||||| |||||||||| | |||||||||||| ||||||||| | Sbjct: 200 tgctccctgcagtccgacatccgggaggtcgccaacaagtgcgccgatgccgccaagctc 259 Query: 235 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 294 ||||||||||||||||| ||||| || || |||||||| ||||| || |||||||| | | Sbjct: 260 gccggcttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtg 319 Query: 295 cccaagaggctgaccttcgacg 316 || | |||||| |||||||||| Sbjct: 320 ccgaggaggcttaccttcgacg 341 Score = 83.8 bits (42), Expect = 3e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 47 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 103 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 51 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 110 Query: 104 gggcctcctccg 115 |||||||||||| Sbjct: 111 gggcctcctccg 122
>dbj|AK067715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119C03, full insert sequence Length = 1332 Score = 172 bits (87), Expect = 4e-40 Identities = 173/202 (85%), Gaps = 6/202 (2%) Strand = Plus / Plus Query: 121 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 174 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 162 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 221 Query: 175 tgctccctgcaatccgacatcagggaggtcgcaagcaagtgcgccgacgccgccaagatg 234 ||||||||||| ||||||||| |||||||||| | |||||||||||| ||||||||| | Sbjct: 222 tgctccctgcagtccgacatccgggaggtcgccaacaagtgcgccgatgccgccaagctc 281 Query: 235 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 294 ||||||||||||||||| ||||| || || |||||||| ||||| || |||||||| | | Sbjct: 282 gccggcttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtg 341 Query: 295 cccaagaggctgaccttcgacg 316 || | |||||| |||||||||| Sbjct: 342 ccgaggaggcttaccttcgacg 363 Score = 83.8 bits (42), Expect = 3e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 47 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 103 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 73 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 132 Query: 104 gggcctcctccg 115 |||||||||||| Sbjct: 133 gggcctcctccg 144
>dbj|AK062941.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-B10, full insert sequence Length = 620 Score = 172 bits (87), Expect = 4e-40 Identities = 173/202 (85%), Gaps = 6/202 (2%) Strand = Plus / Plus Query: 121 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 174 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 152 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 211 Query: 175 tgctccctgcaatccgacatcagggaggtcgcaagcaagtgcgccgacgccgccaagatg 234 ||||||||||| ||||||||| |||||||||| | |||||||||||| ||||||||| | Sbjct: 212 tgctccctgcagtccgacatccgggaggtcgccaacaagtgcgccgatgccgccaagctc 271 Query: 235 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 294 ||||||||||||||||| ||||| || || |||||||| ||||| || |||||||| | | Sbjct: 272 gccggcttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtg 331 Query: 295 cccaagaggctgaccttcgacg 316 || | |||||| |||||||||| Sbjct: 332 ccgaggaggcttaccttcgacg 353 Score = 83.8 bits (42), Expect = 3e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 47 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 103 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 63 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 122 Query: 104 gggcctcctccg 115 |||||||||||| Sbjct: 123 gggcctcctccg 134
>dbj|AK060886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B05, full insert sequence Length = 1208 Score = 172 bits (87), Expect = 4e-40 Identities = 173/202 (85%), Gaps = 6/202 (2%) Strand = Plus / Plus Query: 121 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 174 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 157 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 216 Query: 175 tgctccctgcaatccgacatcagggaggtcgcaagcaagtgcgccgacgccgccaagatg 234 ||||||||||| ||||||||| |||||||||| | |||||||||||| ||||||||| | Sbjct: 217 tgctccctgcagtccgacatccgggaggtcgccaacaagtgcgccgatgccgccaagctc 276 Query: 235 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 294 ||||||||||||||||| ||||| || || |||||||| ||||| || |||||||| | | Sbjct: 277 gccggcttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtg 336 Query: 295 cccaagaggctgaccttcgacg 316 || | |||||| |||||||||| Sbjct: 337 ccgaggaggcttaccttcgacg 358 Score = 83.8 bits (42), Expect = 3e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 47 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 103 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 68 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 127 Query: 104 gggcctcctccg 115 |||||||||||| Sbjct: 128 gggcctcctccg 139
>dbj|AK104080.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A06, full insert sequence Length = 1159 Score = 165 bits (83), Expect = 1e-37 Identities = 172/202 (85%), Gaps = 6/202 (2%) Strand = Plus / Plus Query: 121 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 174 ||||| |||||||||||| |||| |||||||||||| || |||| |||||||||| Sbjct: 137 ccgtcttcgcacgtcgccagggcattcggcgtcgacaccggtgccgccggcaggatcacg 196 Query: 175 tgctccctgcaatccgacatcagggaggtcgcaagcaagtgcgccgacgccgccaagatg 234 ||||||||||| ||||||||| |||||||||| | |||||||||||| ||||||||| | Sbjct: 197 tgctccctgcagtccgacatccgggaggtcgccaacaagtgcgccgatgccgccaagctc 256 Query: 235 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 294 ||||||||||||||||| ||||| || || |||||||| ||||| || |||||||| | | Sbjct: 257 gccggcttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtg 316 Query: 295 cccaagaggctgaccttcgacg 316 || | |||||| |||||||||| Sbjct: 317 ccgaggaggcttaccttcgacg 338 Score = 83.8 bits (42), Expect = 3e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 47 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 103 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 48 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 107 Query: 104 gggcctcctccg 115 |||||||||||| Sbjct: 108 gggcctcctccg 119
>dbj|AK119163.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D09, full insert sequence Length = 1293 Score = 157 bits (79), Expect = 3e-35 Identities = 172/202 (85%), Gaps = 7/202 (3%) Strand = Plus / Plus Query: 121 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 174 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 161 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 220 Query: 175 tgctccctgcaatccgacatcagggaggtcgcaagcaagtgcgccgacgccgccaagatg 234 ||||||||||| ||||||||| |||||||||| | |||||||||||| ||||||||| | Sbjct: 221 tgctccctgcagtccgacatccgggaggtcgccaacaagtgcgccgatgccgccaagctc 280 Query: 235 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 294 ||||||||||||||||| ||||| || || |||||| | ||||| || |||||||| | | Sbjct: 281 gccggcttcgccctcgccacctcagctctgctcgtc-cgggcgccagcgcggagggcgtg 339 Query: 295 cccaagaggctgaccttcgacg 316 || | |||||| |||||||||| Sbjct: 340 ccgaggaggcttaccttcgacg 361 Score = 83.8 bits (42), Expect = 3e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 47 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 103 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 72 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 131 Query: 104 gggcctcctccg 115 |||||||||||| Sbjct: 132 gggcctcctccg 143
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 149 bits (75), Expect = 6e-33 Identities = 137/158 (86%), Gaps = 6/158 (3%) Strand = Plus / Plus Query: 121 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 174 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 17345607 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 17345666 Query: 175 tgctccctgcaatccgacatcagggaggtcgcaagcaagtgcgccgacgccgccaagatg 234 ||||||||||| ||||||||| |||||||||| | |||||||||||| ||||||||| | Sbjct: 17345667 tgctccctgcagtccgacatccgggaggtcgccaacaagtgcgccgatgccgccaagctc 17345726 Query: 235 gccggcttcgccctcgcaacctctgccctcctcgtctc 272 ||||||||||||||||| ||||| || || |||||||| Sbjct: 17345727 gccggcttcgccctcgccacctcagctctgctcgtctc 17345764 Score = 83.8 bits (42), Expect = 3e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 47 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 103 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 17345518 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 17345577 Query: 104 gggcctcctccg 115 |||||||||||| Sbjct: 17345578 gggcctcctccg 17345589 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gccgtcgtcgcacgtcgccc 139 |||||||||||||||||||| Sbjct: 41597608 gccgtcgtcgcacgtcgccc 41597627
>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1080D07 Length = 173856 Score = 149 bits (75), Expect = 6e-33 Identities = 137/158 (86%), Gaps = 6/158 (3%) Strand = Plus / Plus Query: 121 ccgtcgtcgcacgtcgcccgggcgttcggcgtcgac------gctgccgccaggatcacg 174 ||||| |||||||||||| ||||||||||||||||| || |||| |||||||||| Sbjct: 111868 ccgtcttcgcacgtcgccagggcgttcggcgtcgacaccggtgccgccggcaggatcacg 111927 Query: 175 tgctccctgcaatccgacatcagggaggtcgcaagcaagtgcgccgacgccgccaagatg 234 ||||||||||| ||||||||| |||||||||| | |||||||||||| ||||||||| | Sbjct: 111928 tgctccctgcagtccgacatccgggaggtcgccaacaagtgcgccgatgccgccaagctc 111987 Query: 235 gccggcttcgccctcgcaacctctgccctcctcgtctc 272 ||||||||||||||||| ||||| || || |||||||| Sbjct: 111988 gccggcttcgccctcgccacctcagctctgctcgtctc 112025 Score = 83.8 bits (42), Expect = 3e-13 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 47 acatggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggcc 103 |||||||||| || ||||||||||||||||| ||||||| |||||||| ||||||||| Sbjct: 111779 acatggcagcatcgctccaagccgcggccaccctgatgcagccggccaagctcggcggcc 111838 Query: 104 gggcctcctccg 115 |||||||||||| Sbjct: 111839 gggcctcctccg 111850
>gb|AF037457.1|AF037457 Fritillaria agrestis photosystem II oxygen evolving complex protein 1 precursor (psbO) mRNA, complete cds Length = 1140 Score = 81.8 bits (41), Expect = 1e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 211 aagtgcgccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtc 270 |||||| |||| ||||||||| | ||||||||||||||||| || ||||||||| || || Sbjct: 208 aagtgcaccgatgccgccaagctcgccggcttcgccctcgccacatctgccctcgtcatc 267 Query: 271 tctggcgcaagtgcggagggggcgcccaagaggctgacctt 311 || || ||||| || ||||| | ||| |||||||||||||| Sbjct: 268 tcgggagcaagcgctgagggagtgccgaagaggctgacctt 308
>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence Length = 1460 Score = 63.9 bits (32), Expect = 3e-07 Identities = 55/62 (88%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 49 atggcagcgtctctccaagccgcggccacgctgatgc---cggccaagatcggcggccgg 105 |||||||| || ||||||||||||| ||| ||||||| |||||||||||||||||||| Sbjct: 335 atggcagcctcgctccaagccgcgggcaccctgatgcagccggccaagatcggcggccgg 394 Query: 106 gc 107 || Sbjct: 395 gc 396 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 202 gtcgcaagcaagtgcgccgacgccgccaagatggccggcttcgccctcgcaacctctgcc 261 ||||| |||| ||||| ||||||||| ||| | ||||||||||| ||||| ||||| || Sbjct: 497 gtcgccagcaggtgcgtcgacgccgcgaagctcgccggcttcgcgctcgccacctcggcg 556 Query: 262 ctcctcgtc 270 ||||||||| Sbjct: 557 ctcctcgtc 565 Score = 54.0 bits (27), Expect = 3e-04 Identities = 44/49 (89%), Gaps = 3/49 (6%) Strand = Plus / Plus Query: 140 gggcgttcggcgtcgacgctg---ccgccaggatcacgtgctccctgca 185 |||||||||| |||||||| | ||||||||||||||||||||||||| Sbjct: 444 gggcgttcggggtcgacgccggcgccgccaggatcacgtgctccctgca 492
>gb|AY843522.1| Ammopiptanthus mongolicus clone F19 cold-induced mRNA Length = 834 Score = 52.0 bits (26), Expect = 0.001 Identities = 80/98 (81%) Strand = Plus / Plus Query: 219 cgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcgc 278 ||||||| |||| || || || ||||||||||| |||||||| ||| | || ||||| || Sbjct: 240 cgacgccaccaaaattgcaggattcgccctcgccacctctgctctcgttgtatctggagc 299 Query: 279 aagtgcggagggggcgcccaagaggctgaccttcgacg 316 ||||||||| || | || |||||||| |||| ||||| Sbjct: 300 aagtgcggaaggtgttccaaagaggctaacctacgacg 337
>ref|NM_126055.2| Arabidopsis thaliana PSBO-1 (OXYGEN-EVOLVING ENHANCER 33) AT5G66570 (PSBO-1) mRNA, complete cds Length = 1239 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 274 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 333 Query: 278 caagtgcggaggg 290 ||||||||||||| Sbjct: 334 caagtgcggaggg 346
>gb|BT000407.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1031 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 188 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 247 Query: 278 caagtgcggaggg 290 ||||||||||||| Sbjct: 248 caagtgcggaggg 260
>gb|AY136291.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1114 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 233 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 292 Query: 278 caagtgcggaggg 290 ||||||||||||| Sbjct: 293 caagtgcggaggg 305
>gb|AY061924.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 999 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 188 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 247 Query: 278 caagtgcggaggg 290 ||||||||||||| Sbjct: 248 caagtgcggaggg 260
>gb|AF424626.1|AF424626 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1141 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 222 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 281 Query: 278 caagtgcggaggg 290 ||||||||||||| Sbjct: 282 caagtgcggaggg 294
>gb|AY054583.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (At5g66570; K1F13.25) mRNA, complete cds Length = 1118 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 224 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 283 Query: 278 caagtgcggaggg 290 ||||||||||||| Sbjct: 284 caagtgcggaggg 296
>gb|AY052299.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1132 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 222 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 281 Query: 278 caagtgcggaggg 290 ||||||||||||| Sbjct: 282 caagtgcggaggg 294
>gb|AF372898.1|AF372898 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1150 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 222 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 281 Query: 278 caagtgcggaggg 290 ||||||||||||| Sbjct: 282 caagtgcggaggg 294
>emb|BX830360.1|CNS0A01E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1088 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 220 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 279 Query: 278 caagtgcggaggg 290 ||||||||||||| Sbjct: 280 caagtgcggaggg 292
>emb|BX831462.1|CNS09ZGC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 213 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 272 Query: 278 caagtgcggaggg 290 ||||||||||||| Sbjct: 273 caagtgcggaggg 285
>emb|BX831411.1|CNS09ZD1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZC06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 204 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 263 Query: 278 caagtgcggaggg 290 ||||||||||||| Sbjct: 264 caagtgcggaggg 276
>gb|AY087630.1| Arabidopsis thaliana clone 37218 mRNA, complete sequence Length = 1202 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 274 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 333 Query: 278 caagtgcggaggg 290 ||||||||||||| Sbjct: 334 caagtgcggaggg 346
>emb|X52428.1|ATOEP A.thaliana mRNA for 33 kDa oxygen-evolving protein Length = 1140 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 221 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 280 Query: 278 caagtgcggaggg 290 ||||||||||||| Sbjct: 281 caagtgcggaggg 293
>ref|NM_114942.2| Arabidopsis thaliana PSBO-2/PSBO2; oxygen evolving AT3G50820 (PSBO-2/PSBO2) mRNA, complete cds Length = 1243 Score = 48.1 bits (24), Expect = 0.017 Identities = 72/88 (81%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 |||||||||||||||| ||||| || || || || |||||||| ||| | ||||| || | Sbjct: 300 ccgacgccgccaagatcgccggttttgctctagccacctctgctctcgttgtctcggggg 359 Query: 278 caagtgcggagggggcgcccaagaggct 305 | |||||||||| || || |||||||| Sbjct: 360 ccggtgcggagggagcaccaaagaggct 387
>gb|AY364014.1| Brassica rapa photosystem II protein (psbO) mRNA, complete cds Length = 1156 Score = 48.1 bits (24), Expect = 0.017 Identities = 48/56 (85%) Strand = Plus / Plus Query: 235 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggaggg 290 ||||| ||||| || ||||||||||| ||| ||||||| || |||||||| ||||| Sbjct: 259 gccggattcgctcttgcaacctctgctctcgtcgtctcgggagcaagtgcagaggg 314
>gb|AY641568.1| Brassica oleracea photosystem II protein (psbO) mRNA, complete cds Length = 1158 Score = 48.1 bits (24), Expect = 0.017 Identities = 48/56 (85%) Strand = Plus / Plus Query: 235 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggaggg 290 ||||| ||||| || ||||||||||| ||| ||||||| || |||||||| ||||| Sbjct: 269 gccggattcgctcttgcaacctctgctctcgtcgtctcgggagcaagtgcagaggg 324
>gb|AY116934.1| Arabidopsis thaliana AT3g50820/F18B3_100 mRNA, complete cds Length = 996 Score = 48.1 bits (24), Expect = 0.017 Identities = 72/88 (81%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 |||||||||||||||| ||||| || || || || |||||||| ||| | ||||| || | Sbjct: 185 ccgacgccgccaagatcgccggttttgctctagccacctctgctctcgttgtctcggggg 244 Query: 278 caagtgcggagggggcgcccaagaggct 305 | |||||||||| || || |||||||| Sbjct: 245 ccggtgcggagggagcaccaaagaggct 272
>gb|AY050362.1| Arabidopsis thaliana AT3g50820/F18B3_100 mRNA, complete cds Length = 1127 Score = 48.1 bits (24), Expect = 0.017 Identities = 72/88 (81%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 |||||||||||||||| ||||| || || || || |||||||| ||| | ||||| || | Sbjct: 243 ccgacgccgccaagatcgccggttttgctctagccacctctgctctcgttgtctcggggg 302 Query: 278 caagtgcggagggggcgcccaagaggct 305 | |||||||||| || || |||||||| Sbjct: 303 ccggtgcggagggagcaccaaagaggct 330
>emb|BX822412.1|CNS0A77V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZE10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1004 Score = 48.1 bits (24), Expect = 0.017 Identities = 72/88 (81%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 |||||||||||||||| ||||| || || || || |||||||| ||| | ||||| || | Sbjct: 205 ccgacgccgccaagatcgccggttttgctctagccacctctgctctcgttgtctcggggg 264 Query: 278 caagtgcggagggggcgcccaagaggct 305 | |||||||||| || || |||||||| Sbjct: 265 ccggtgcggagggagcaccaaagaggct 292
>emb|BX823920.1|CNS0A6OQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1067 Score = 48.1 bits (24), Expect = 0.017 Identities = 72/88 (81%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 |||||||||||||||| ||||| || || || || |||||||| ||| | ||||| || | Sbjct: 191 ccgacgccgccaagatcgccggttttgctctagccacctctgctctcgttgtctcggggg 250 Query: 278 caagtgcggagggggcgcccaagaggct 305 | |||||||||| || || |||||||| Sbjct: 251 ccggtgcggagggagcaccaaagaggct 278
>gb|AY088799.1| Arabidopsis thaliana clone 95531 mRNA, complete sequence Length = 1189 Score = 48.1 bits (24), Expect = 0.017 Identities = 72/88 (81%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 |||||||||||||||| ||||| || || || || |||||||| ||| | ||||| || | Sbjct: 300 ccgacgccgccaagatcgccggttttgctctagccacctctgctctcgttgtctcggggg 359 Query: 278 caagtgcggagggggcgcccaagaggct 305 | |||||||||| || || |||||||| Sbjct: 360 ccggtgcggagggagcaccaaagaggct 387
>emb|AJ145957.1|ATH145957 Arabidopsis thaliana mRNA for precursor of the 33 kDa subunit of the oxygen evolving complex (psbO2 gene) Length = 1159 Score = 48.1 bits (24), Expect = 0.017 Identities = 72/88 (81%) Strand = Plus / Plus Query: 218 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 277 |||||||||||||||| ||||| || || || || |||||||| ||| | ||||| || | Sbjct: 221 ccgacgccgccaagatcgccggttttgctctagccacctctgctctcgttgtctcggggg 280 Query: 278 caagtgcggagggggcgcccaagaggct 305 | |||||||||| || || |||||||| Sbjct: 281 ccggtgcggagggagcaccaaagaggct 308
>gb|AF139818.1|AF139818 Brassica napus 33 kDa oxygen evolving protein of photosystem II (psbo) mRNA, complete cds Length = 1247 Score = 48.1 bits (24), Expect = 0.017 Identities = 63/76 (82%) Strand = Plus / Plus Query: 209 gcaagtgcgccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcg 268 |||| ||| ||||||| | |||||| ||||| || || || ||||||||||| ||| ||| Sbjct: 185 gcaaatgctccgacgctgtcaagatcgccggatttgcgctagcaacctctgctctcgtcg 244 Query: 269 tctctggcgcaagtgc 284 |||| || |||||||| Sbjct: 245 tctcgggagcaagtgc 260
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 aacatggcagcgtctctccaagccgcggc 74 ||||||| |||||||||||||||||||| Sbjct: 69559 aacatggacgcgtctctccaagccgcggc 69587
>gb|AY056401.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1156 Score = 42.1 bits (21), Expect = 1.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 254 cctctgccctcctcgtctctggcgcaagtgcggaggg 290 ||||||| ||| ||||||| || |||||||||||||| Sbjct: 264 cctctgctctcgtcgtctcgggagcaagtgcggaggg 300
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 aacatggcagcgtctctccaagccgcggc 74 ||||||| |||||||||||||||||||| Sbjct: 69753 aacatggacgcgtctctccaagccgcggc 69781
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 aacatggcagcgtctctccaagccgcggc 74 ||||||| |||||||||||||||||||| Sbjct: 33638499 aacatggacgcgtctctccaagccgcggc 33638527
>dbj|AK111108.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-A04, full insert sequence Length = 826 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 46 aacatggcagcgtctctccaagccgcggc 74 ||||||| |||||||||||||||||||| Sbjct: 496 aacatggacgcgtctctccaagccgcggc 468
>dbj|AB065118.1| Photobacterium phosphoreum glyA, ribX, ribD, ribC, ribBA, ribE, nusB, thiL genes for serine hydroxymethyl transferase, RibX, pyrimidine deaminase/pyrimidine reductase, riboflavin synthase, GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase, lumazine synthase, NusB protein, thiamin monophosphate kinase, partial and complete cds Length = 5616 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 caagtgcgccgacgccgccaa 230 ||||||||||||||||||||| Sbjct: 789 caagtgcgccgacgccgccaa 809
>ref|XM_519676.1| PREDICTED: Pan troglodytes similar to epoxide hydrolase 2, cytoplasmic (LOC464074), mRNA Length = 2517 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 88 gggcctcctccgtgcggccg 69
>ref|XM_463700.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 297 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gccgtcgtcgcacgtcgccc 139 |||||||||||||||||||| Sbjct: 30 gccgtcgtcgcacgtcgccc 11
>gb|BC007708.2| Homo sapiens epoxide hydrolase 2, cytoplasmic, mRNA (cDNA clone MGC:11288 IMAGE:3946158), complete cds Length = 2118 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 122 gggcctcctccgtgcggccg 103
>ref|NM_001979.4| Homo sapiens epoxide hydrolase 2, cytoplasmic (EPHX2), mRNA Length = 2196 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 169 gggcctcctccgtgcggccg 150
>ref|NM_012776.1| Rattus norvegicus adrenergic receptor kinase, beta 1 (Adrbk1), mRNA Length = 2683 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 gcgccgacgccgccaagatggccg 238 |||||| ||||||||||||||||| Sbjct: 127 gcgccgccgccgccaagatggccg 150
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 acgccgccaagatggccggc 240 |||||||||||||||||||| Sbjct: 21901 acgccgccaagatggccggc 21882
>gb|BC033272.1| Mus musculus adrenergic receptor kinase, beta 1, mRNA (cDNA clone IMAGE:4457290), with apparent retained intron Length = 3540 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 gcgccgacgccgccaagatggccg 238 |||||| ||||||||||||||||| Sbjct: 49 gcgccgccgccgccaagatggccg 72
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 gcaagtgcgccgacgccgcc 228 |||||||||||||||||||| Sbjct: 1695787 gcaagtgcgccgacgccgcc 1695768 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 tcggcgtcgacgctgccgcc 165 |||||||||||||||||||| Sbjct: 866365 tcggcgtcgacgctgccgcc 866346
>gb|AF311103.5| Homo sapiens chromosome 8 clone SCb-212E3 map p21-p11, complete sequence Length = 234429 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 101179 gggcctcctccgtgcggccg 101160
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gcccgggcgttcggcgtcga 155 |||||||||||||||||||| Sbjct: 43043 gcccgggcgttcggcgtcga 43062
>gb|BT007592.1| Synthetic construct Homo sapiens epoxide hydrolase 2, cytoplasmic mRNA, partial cds Length = 1668 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 88 gggcctcctccgtgcggccg 69
>gb|BT006885.1| Homo sapiens epoxide hydrolase 2, cytoplasmic mRNA, complete cds Length = 1668 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 88 gggcctcctccgtgcggccg 69
>dbj|AK096089.1| Homo sapiens cDNA FLJ38770 fis, clone KIDNE2016000, highly similar to SOLUBLE EPOXIDE HYDROLASE (EC 3.3.2.3) Length = 2041 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 146 gggcctcctccgtgcggccg 127
>dbj|AK096770.1| Homo sapiens cDNA FLJ39451 fis, clone PROST2009273, highly similar to SOLUBLE EPOXIDE HYDROLASE (SEH) (EC 3.3.2.3) Length = 2067 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 131 gggcctcctccgtgcggccg 112
>emb|CR590835.1| full-length cDNA clone CS0DM012YJ10 of Fetal liver of Homo sapiens (human) Length = 2067 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 117 gggcctcctccgtgcggccg 98
>emb|CR590101.1| full-length cDNA clone CS0DI033YF09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1959 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 105 gggcctcctccgtgcggccg 86
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gccgtcgtcgcacgtcgccc 139 |||||||||||||||||||| Sbjct: 2358486 gccgtcgtcgcacgtcgccc 2358467
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gccgtcgtcgcacgtcgccc 139 |||||||||||||||||||| Sbjct: 5951096 gccgtcgtcgcacgtcgccc 5951077
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gccgtcgtcgcacgtcgccc 139 |||||||||||||||||||| Sbjct: 29388984 gccgtcgtcgcacgtcgccc 29388965
>dbj|AP003259.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466H10 Length = 176530 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gccgtcgtcgcacgtcgccc 139 |||||||||||||||||||| Sbjct: 13210 gccgtcgtcgcacgtcgccc 13229
>gb|AF233336.1|AF233336 Homo sapiens clone 129-13 soluble epoxide hydrolase (EPHX2) mRNA, complete cds Length = 1786 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 122 gggcctcctccgtgcggccg 103
>gb|AF233335.1|AF233335 Homo sapiens clone 118-2 soluble epoxide hydrolase (EPHX2) mRNA, complete cds Length = 1783 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 122 gggcctcctccgtgcggccg 103
>gb|AF233334.1|AF233334 Homo sapiens clone 129-8 soluble epoxide hydrolase (EPHX2) mRNA, complete cds Length = 1783 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 122 gggcctcctccgtgcggccg 103
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0621D05 Length = 180250 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gccgtcgtcgcacgtcgccc 139 |||||||||||||||||||| Sbjct: 99865 gccgtcgtcgcacgtcgccc 99846
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008C11 Length = 157205 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gccgtcgtcgcacgtcgccc 139 |||||||||||||||||||| Sbjct: 6266 gccgtcgtcgcacgtcgccc 6247
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gccgtcgtcgcacgtcgccc 139 |||||||||||||||||||| Sbjct: 93544 gccgtcgtcgcacgtcgccc 93525
>gb|AY892830.1| Synthetic construct Homo sapiens clone FLH024624.01L epoxide hydrolase 2 cytoplasmic (EPHX2) mRNA, partial cds Length = 1668 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 88 gggcctcctccgtgcggccg 69
>gb|AY892829.1| Synthetic construct Homo sapiens clone FLH024623.01L epoxide hydrolase 2 cytoplasmic (EPHX2) mRNA, partial cds Length = 1668 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 88 gggcctcctccgtgcggccg 69
>gb|AY890363.1| Synthetic construct Homo sapiens clone FLH024628.01X epoxide hydrolase 2 cytoplasmic (EPHX2) mRNA, complete cds Length = 1668 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 88 gggcctcctccgtgcggccg 69
>gb|AY890362.1| Synthetic construct Homo sapiens clone FLH024627.01X epoxide hydrolase 2 cytoplasmic (EPHX2) mRNA, complete cds Length = 1668 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 88 gggcctcctccgtgcggccg 69
>gb|BC011628.2| Homo sapiens epoxide hydrolase 2, cytoplasmic, mRNA (cDNA clone MGC:10543 IMAGE:4053931), complete cds Length = 2156 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 153 gggcctcctccgtgcggccg 134
>dbj|AK061129.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-H06, full insert sequence Length = 774 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 ggcgcccaagaggctgacct 310 |||||||||||||||||||| Sbjct: 203 ggcgcccaagaggctgacct 222
>emb|X97024.1|HSEPHX21 H.sapiens EPHX2 gene, exon 1 (and joined CDS) Length = 396 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 98 gggcctcctccgtgcggccg 79
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gccgtcgtcgcacgtcgccc 139 |||||||||||||||||||| Sbjct: 2358430 gccgtcgtcgcacgtcgccc 2358411
>emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa0023M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 156258 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gccgtcgtcgcacgtcgccc 139 |||||||||||||||||||| Sbjct: 83677 gccgtcgtcgcacgtcgccc 83658
>gb|BC013874.2| Homo sapiens epoxide hydrolase 2, cytoplasmic, mRNA (cDNA clone MGC:10466 IMAGE:3938557), complete cds Length = 2129 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 116 gggcctcctccgtgcggccg 97
>gb|M87854.1|RATBARK1 Rattus norvegicus beta-adrenergic receptor kinase 1 (beta-ARK1) mRNA, complete cds Length = 2683 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 gcgccgacgccgccaagatggccg 238 |||||| ||||||||||||||||| Sbjct: 127 gcgccgccgccgccaagatggccg 150
>gb|L05779.1|HUMCYTEPOX Human cytosolic epoxide hydrolase mRNA, complete cds Length = 2100 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gggcctcctccgtgcggccg 123 |||||||||||||||||||| Sbjct: 129 gggcctcctccgtgcggccg 110 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,028,495 Number of Sequences: 3902068 Number of extensions: 2028495 Number of successful extensions: 34172 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 33789 Number of HSP's gapped (non-prelim): 367 length of query: 316 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 294 effective length of database: 17,147,199,772 effective search space: 5041276732968 effective search space used: 5041276732968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)