ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet72b07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 139 bits (70), Expect = 5e-30 Identities = 148/174 (85%) Strand = Plus / Plus Query: 109 gccggcgacgatgccgatgctcatccccgacgacgttcgcgccaaggcggagatctacac 168 ||||||||||||| || || ||||| |||||||| || || ||||||||| | ||| Sbjct: 23149214 gccggcgacgatgacgctgacgatcccggacgacgtgcgggcgaaggcggaggtgtacgt 23149273 Query: 169 cggcgacgcggcggggcaggagaagacgcggctgatgctggcggagacggagctccccag 228 |||||||| ||| ||||||||||||||||||||| |||||| |||||||| ||||||||| Sbjct: 23149274 cggcgacgaggccgggcaggagaagacgcggctgctgctggaggagacggggctccccag 23149333 Query: 229 cgggctcctgccactcaaggacatcatcgagtgcgggtacgttgaggagaccgg 282 ||| ||||| || ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 23149334 cggcctcctccctctccgcgacatcatcgagtgcggctacgtggaggagaccgg 23149387
>dbj|AK109434.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G11, full insert sequence Length = 960 Score = 139 bits (70), Expect = 5e-30 Identities = 148/174 (85%) Strand = Plus / Plus Query: 109 gccggcgacgatgccgatgctcatccccgacgacgttcgcgccaaggcggagatctacac 168 ||||||||||||| || || ||||| |||||||| || || ||||||||| | ||| Sbjct: 81 gccggcgacgatgacgctgacgatcccggacgacgtgcgggcgaaggcggaggtgtacgt 140 Query: 169 cggcgacgcggcggggcaggagaagacgcggctgatgctggcggagacggagctccccag 228 |||||||| ||| ||||||||||||||||||||| |||||| |||||||| ||||||||| Sbjct: 141 cggcgacgaggccgggcaggagaagacgcggctgctgctggaggagacggggctccccag 200 Query: 229 cgggctcctgccactcaaggacatcatcgagtgcgggtacgttgaggagaccgg 282 ||| ||||| || ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 201 cggcctcctccctctccgcgacatcatcgagtgcggctacgtggaggagaccgg 254
>dbj|AK105895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-E12, full insert sequence Length = 1044 Score = 139 bits (70), Expect = 5e-30 Identities = 148/174 (85%) Strand = Plus / Plus Query: 109 gccggcgacgatgccgatgctcatccccgacgacgttcgcgccaaggcggagatctacac 168 ||||||||||||| || || ||||| |||||||| || || ||||||||| | ||| Sbjct: 76 gccggcgacgatgacgctgacgatcccggacgacgtgcgggcgaaggcggaggtgtacgt 135 Query: 169 cggcgacgcggcggggcaggagaagacgcggctgatgctggcggagacggagctccccag 228 |||||||| ||| ||||||||||||||||||||| |||||| |||||||| ||||||||| Sbjct: 136 cggcgacgaggccgggcaggagaagacgcggctgctgctggaggagacggggctccccag 195 Query: 229 cgggctcctgccactcaaggacatcatcgagtgcgggtacgttgaggagaccgg 282 ||| ||||| || ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 196 cggcctcctccctctccgcgacatcatcgagtgcggctacgtggaggagaccgg 249
>dbj|AK069514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020B07, full insert sequence Length = 1046 Score = 139 bits (70), Expect = 5e-30 Identities = 148/174 (85%) Strand = Plus / Plus Query: 109 gccggcgacgatgccgatgctcatccccgacgacgttcgcgccaaggcggagatctacac 168 ||||||||||||| || || ||||| |||||||| || || ||||||||| | ||| Sbjct: 82 gccggcgacgatgacgctgacgatcccggacgacgtgcgggcgaaggcggaggtgtacgt 141 Query: 169 cggcgacgcggcggggcaggagaagacgcggctgatgctggcggagacggagctccccag 228 |||||||| ||| ||||||||||||||||||||| |||||| |||||||| ||||||||| Sbjct: 142 cggcgacgaggccgggcaggagaagacgcggctgctgctggaggagacggggctccccag 201 Query: 229 cgggctcctgccactcaaggacatcatcgagtgcgggtacgttgaggagaccgg 282 ||| ||||| || ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 202 cggcctcctccctctccgcgacatcatcgagtgcggctacgtggaggagaccgg 255
>dbj|AK060891.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C01, full insert sequence Length = 1001 Score = 139 bits (70), Expect = 5e-30 Identities = 148/174 (85%) Strand = Plus / Plus Query: 109 gccggcgacgatgccgatgctcatccccgacgacgttcgcgccaaggcggagatctacac 168 ||||||||||||| || || ||||| |||||||| || || ||||||||| | ||| Sbjct: 83 gccggcgacgatgacgctgacgatcccggacgacgtgcgggcgaaggcggaggtgtacgt 142 Query: 169 cggcgacgcggcggggcaggagaagacgcggctgatgctggcggagacggagctccccag 228 |||||||| ||| ||||||||||||||||||||| |||||| |||||||| ||||||||| Sbjct: 143 cggcgacgaggccgggcaggagaagacgcggctgctgctggaggagacggggctccccag 202 Query: 229 cgggctcctgccactcaaggacatcatcgagtgcgggtacgttgaggagaccgg 282 ||| ||||| || ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 203 cggcctcctccctctccgcgacatcatcgagtgcggctacgtggaggagaccgg 256
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 139 bits (70), Expect = 5e-30 Identities = 148/174 (85%) Strand = Plus / Plus Query: 109 gccggcgacgatgccgatgctcatccccgacgacgttcgcgccaaggcggagatctacac 168 ||||||||||||| || || ||||| |||||||| || || ||||||||| | ||| Sbjct: 23077405 gccggcgacgatgacgctgacgatcccggacgacgtgcgggcgaaggcggaggtgtacgt 23077464 Query: 169 cggcgacgcggcggggcaggagaagacgcggctgatgctggcggagacggagctccccag 228 |||||||| ||| ||||||||||||||||||||| |||||| |||||||| ||||||||| Sbjct: 23077465 cggcgacgaggccgggcaggagaagacgcggctgctgctggaggagacggggctccccag 23077524 Query: 229 cgggctcctgccactcaaggacatcatcgagtgcgggtacgttgaggagaccgg 282 ||| ||||| || ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 23077525 cggcctcctccctctccgcgacatcatcgagtgcggctacgtggaggagaccgg 23077578
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 139 bits (70), Expect = 5e-30 Identities = 148/174 (85%) Strand = Plus / Minus Query: 109 gccggcgacgatgccgatgctcatccccgacgacgttcgcgccaaggcggagatctacac 168 ||||||||||||| || || ||||| |||||||| || || ||||||||| | ||| Sbjct: 29183 gccggcgacgatgacgctgacgatcccggacgacgtgcgggcgaaggcggaggtgtacgt 29124 Query: 169 cggcgacgcggcggggcaggagaagacgcggctgatgctggcggagacggagctccccag 228 |||||||| ||| ||||||||||||||||||||| |||||| |||||||| ||||||||| Sbjct: 29123 cggcgacgaggccgggcaggagaagacgcggctgctgctggaggagacggggctccccag 29064 Query: 229 cgggctcctgccactcaaggacatcatcgagtgcgggtacgttgaggagaccgg 282 ||| ||||| || ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 29063 cggcctcctccctctccgcgacatcatcgagtgcggctacgtggaggagaccgg 29010
>gb|AY550474.1| Salmo salar clone Hae376 microsatellite sequence Length = 892 Score = 46.1 bits (23), Expect = 0.060 Identities = 29/31 (93%) Strand = Plus / Plus Query: 56 cgtgcgtgtgtgagtgagcgagcgagcgagc 86 |||| ||||||| |||||||||||||||||| Sbjct: 792 cgtgtgtgtgtgtgtgagcgagcgagcgagc 822 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 gtgtgtgagtgagcgagcgagcga 84 ||||||||| |||||||||||||| Sbjct: 801 gtgtgtgagcgagcgagcgagcga 824
>emb|BX530018.8| Zebrafish DNA sequence from clone DKEY-228B21 in linkage group 1, complete sequence Length = 221617 Score = 46.1 bits (23), Expect = 0.060 Identities = 23/23 (100%) Strand = Plus / Plus Query: 62 tgtgtgagtgagcgagcgagcga 84 ||||||||||||||||||||||| Sbjct: 46953 tgtgtgagtgagcgagcgagcga 46975
>gb|AC167720.2| Mus musculus BAC clone RP24-216G15 from chromosome 16, complete sequence Length = 172721 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 171613 gtgagtgagcgagcgagcgagc 171592
>ref|XM_508321.1| PREDICTED: Pan troglodytes similar to hypothetical protein (LOC451067), mRNA Length = 2007 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 441 gtgagtgagcgagcgagcgagc 420
>gb|AC114674.10| Mus musculus chromosome 9, clone RP24-209N21, complete sequence Length = 203120 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 61 gtgtgtgagtgagcgagcgagcgagc 86 |||||||||||||||||| ||||||| Sbjct: 26667 gtgtgtgagtgagcgagctagcgagc 26692
>gb|AC135672.4| Mus musculus BAC clone RP23-449K22 from chromosome 9, complete sequence Length = 162356 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 61 gtgtgtgagtgagcgagcgagcgagc 86 |||||||||||||||||| ||||||| Sbjct: 13140 gtgtgtgagtgagcgagctagcgagc 13115
>gb|AY491806.1| Euphydryas aurinia clone EA26 microsatellite sequence Length = 429 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 61 gtgtgtgagtgagcgagcgagcgagc 86 ||||||| |||||||||||||||||| Sbjct: 282 gtgtgtgtgtgagcgagcgagcgagc 307
>gb|AY277973.1| Takifugu rubripes transcription factor Sox5 (Sox5) gene, complete cds Length = 61929 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 61 gtgtgtgagtgagcgagcgagcgagc 86 ||||||| |||||||||||||||||| Sbjct: 16186 gtgtgtgtgtgagcgagcgagcgagc 16161 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 61 gtgtgtgagtgagcgagcgagcgagc 86 ||||||||| |||||||||||||||| Sbjct: 16182 gtgtgtgagcgagcgagcgagcgagc 16157
>gb|AC182651.2| Populus trichocarpa clone Pop1-118I23, complete sequence Length = 96071 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 41617 gtgagtgagcgagcgagcgagc 41596
>emb|AL672152.8| Mouse DNA sequence from clone RP23-426A16 on chromosome X, complete sequence Length = 200643 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 122380 gtgagtgagcgagcgagcgagc 122401
>emb|BX025581.1|CNS08RWH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA39AH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 939 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 595 gtgagtgagcgagcgagcgagc 574
>emb|AL591492.11| Zebrafish DNA sequence from clone BUSM1-261O22 in linkage group 20 Contains a novel gene similar to FKBP3 (FK506 binding protein 3), a novel gene for a protein similar to pre-mRNA processing proteins, a novel retrotransposon and two CpG islands, complete sequence Length = 92083 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 gtgtgtgagtgagcgagcgagc 82 |||||||||||||||||||||| Sbjct: 45567 gtgtgtgagtgagcgagcgagc 45546 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 tgtgtgagtgagcgagcgagcgag 85 |||||||||||||||| ||||||| Sbjct: 88334 tgtgtgagtgagcgagtgagcgag 88311
>gb|AC154233.3| Mus musculus BAC clone RP24-345G9 from chromosome 16, complete sequence Length = 178248 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 18092 gtgagtgagcgagcgagcgagc 18071
>emb|CR361560.10| Zebrafish DNA sequence from clone CH211-122G18 in linkage group 24, complete sequence Length = 184660 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 139809 gtgagtgagcgagcgagcgagc 139830
>gb|AC103974.6| Homo sapiens chromosome 11, clone RP11-1081L13, complete sequence Length = 189230 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 183162 gtgagtgagcgagcgagcgagc 183141
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggccggcgacgatgccgatgct 129 |||||||||||||||||||||| Sbjct: 2829201 ggccggcgacgatgccgatgct 2829222 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gcgccaaggcggagatctac 166 |||||||||||||||||||| Sbjct: 632049 gcgccaaggcggagatctac 632068
>gb|AC087333.2|AC087333 Takifugu rubripes clone 244C11, complete sequence Length = 78437 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 61 gtgtgtgagtgagcgagcgagcgagc 86 ||||||||| |||||||||||||||| Sbjct: 60652 gtgtgtgagcgagcgagcgagcgagc 60677
>gb|AC154816.2| Mus musculus BAC clone RP24-534N1 from chromosome 13, complete sequence Length = 155476 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 54473 gtgagtgagcgagcgagcgagc 54494
>gb|AC140776.6| Mus musculus chromosome 1, clone RP23-284K5, complete sequence Length = 223196 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 107701 gtgagtgagcgagcgagcgagc 107722
>gb|AF513662.1| Aphanocalyx microphyllus subsp. compactus 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 934 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 269 gtgagtgagcgagcgagcgagc 248
>gb|AC026765.22| Homo sapiens 12 BAC RP4-601P9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 129225 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 gagcgagcgagcgagctcaggg 92 |||||||||||||||||||||| Sbjct: 111305 gagcgagcgagcgagctcaggg 111326
>emb|AL807810.19| Mouse DNA sequence from clone RP23-186F3 on chromosome 4, complete sequence Length = 165488 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 106721 gtgagtgagcgagcgagcgagc 106742
>gb|AC114542.9| Mus musculus chromosome 9, clone RP23-111F9, complete sequence Length = 235924 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 204742 gtgagtgagcgagcgagcgagc 204763
>gb|AC144942.4| Mus musculus BAC clone RP23-402N21 from 10, complete sequence Length = 200875 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 33496 gtgagtgagcgagcgagcgagc 33517
>gb|AC106841.11| Mus musculus chromosome 1, clone RP24-554B1, complete sequence Length = 165972 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 56995 gtgagtgagcgagcgagcgagc 56974
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 caccggcgacgcggcggggcag 187 |||||||||||||||||||||| Sbjct: 3025158 caccggcgacgcggcggggcag 3025179
>gb|AC144783.4| Mus musculus BAC clone RP23-57A16 from 10, complete sequence Length = 246132 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 245728 gtgagtgagcgagcgagcgagc 245749
>gb|AC124718.4| Mus musculus BAC clone RP23-373N7 from 1, complete sequence Length = 201807 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 151370 gtgagtgagcgagcgagcgagc 151349
>emb|CT025678.6| Mouse DNA sequence from clone RP24-153A6 on chromosome 9, complete sequence Length = 175790 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 164246 gtgagtgagcgagcgagcgagc 164225
>emb|AL645605.14| Mouse DNA sequence from clone RP23-157B15 on chromosome 4, complete sequence Length = 50337 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgagc 86 |||||||||||||||||||||| Sbjct: 45478 gtgagtgagcgagcgagcgagc 45499
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 ccggccggcgacgatgccgat 126 ||||||||||||||||||||| Sbjct: 2492061 ccggccggcgacgatgccgat 2492041
>gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, complete sequence Length = 218755 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 agtgagcgagcgagcgagctc 88 ||||||||||||||||||||| Sbjct: 114767 agtgagcgagcgagcgagctc 114787
>gb|AC008139.9| Drosophila melanogaster clone BACR28B01, complete sequence Length = 170675 Score = 42.1 bits (21), Expect = 0.93 Identities = 27/29 (93%) Strand = Plus / Plus Query: 56 cgtgcgtgtgtgagtgagcgagcgagcga 84 |||||||||||| ||| |||||||||||| Sbjct: 4791 cgtgcgtgtgtgtgtgtgcgagcgagcga 4819
>ref|XM_587854.2| PREDICTED: Bos taurus similar to dolichyl-di-phosphooligosaccharide-protein glycotransferase (predicted) (LOC510682), mRNA Length = 1503 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 gtgtgtgagtgagcgagcgag 81 ||||||||||||||||||||| Sbjct: 424 gtgtgtgagtgagcgagcgag 404
>ref|XM_865931.1| PREDICTED: Bos taurus similar to Protein tyrosine phosphatase type IVA protein 2 (Protein-tyrosine phosphatase 4a2) (Protein-tyrosine phosphatase of regenerating liver-2) (PRL-2) (LOC614435), mRNA Length = 2712 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 gtgtgtgagtgagcgagcgag 81 ||||||||||||||||||||| Sbjct: 2375 gtgtgtgagtgagcgagcgag 2395
>gb|AC120558.12| Mus musculus chromosome 18, clone RP24-494K12, complete sequence Length = 216435 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 tgagtgagcgagcgagcgagc 86 ||||||||||||||||||||| Sbjct: 95225 tgagtgagcgagcgagcgagc 95205
>emb|AJ312850.1|RSE312850 Rhodeus sericeus microsatellite DNA Rser 10, clone BITT2E01 Length = 264 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 gcgtgtgtgagtgagcgagcgagcg 83 ||||| ||||||||||||||||||| Sbjct: 23 gcgtgagtgagtgagcgagcgagcg 47
>gb|AC132098.4| Mus musculus BAC clone RP24-401I1 from chromosome 18, complete sequence Length = 154520 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 tgagtgagcgagcgagcgagc 86 ||||||||||||||||||||| Sbjct: 2205 tgagtgagcgagcgagcgagc 2185
>gb|AY392037.1|AY392037S1 Rattus norvegicus microtubule-associated protein 1 light chain 3 copy 1 (Map1lc3) pseudogene, partial sequence Length = 1799 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcgag 85 ||||||||||||||||||||| Sbjct: 1726 gtgagtgagcgagcgagcgag 1706 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcgag 85 ||||||||||||||||||||| Sbjct: 1430 gtgagtgagcgagcgagcgag 1410
>gb|AC109240.30| Mus musculus chromosome 1, clone RP23-445I23, complete sequence Length = 189545 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 agtgagcgagcgagcgagctc 88 ||||||||||||||||||||| Sbjct: 23435 agtgagcgagcgagcgagctc 23415
>gb|AY597278.1| Pseudomonas viridiflava strain PNA3.3a pathogenicity island PAI-Region-1, partial sequence Length = 54118 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 cggctgatgctggcggagacg 217 ||||||||||||||||||||| Sbjct: 18193 cggctgatgctggcggagacg 18173
>gb|AY597277.1| Pseudomonas viridiflava strain LP23.1a pathogenicity island PAI-Region-1, partial sequence Length = 60908 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 cggctgatgctggcggagacg 217 ||||||||||||||||||||| Sbjct: 23437 cggctgatgctggcggagacg 23417
>emb|BX027983.1|CNS08TR7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA41DE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 642 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 gtgtgtgagtgagcgagcgagcgag 85 ||||||||| ||||||||||||||| Sbjct: 138 gtgtgtgagcgagcgagcgagcgag 114
>gb|AY183914.1| Marchantia polymorpha beta-ketoacyl-CoA-synthase gene, complete cds Length = 9798 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgag 85 ||||||||||||||||||||| Sbjct: 4746 gtgagtgagcgagcgagcgag 4766
>emb|BX957336.13| Zebrafish DNA sequence from clone CH211-286D8 in linkage group 5, complete sequence Length = 70642 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgag 85 ||||||||||||||||||||| Sbjct: 23644 gtgagtgagcgagcgagcgag 23664
>emb|CR352255.9| Zebrafish DNA sequence from clone CH211-118E10 in linkage group 24, complete sequence Length = 161221 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgag 85 ||||||||||||||||||||| Sbjct: 83789 gtgagtgagcgagcgagcgag 83809
>emb|BX276114.6| Zebrafish DNA sequence from clone CH211-176L11 in linkage group 20 Contains the kit gene for kit receptor, the 3' end of the pdgfra gene for platelet derived growth factor receptor alpha and a CpG island, complete sequence Length = 134212 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcgag 85 ||||||||||||||||||||| Sbjct: 8204 gtgagtgagcgagcgagcgag 8184
>emb|BX572622.13| Zebrafish DNA sequence from clone CH211-150O20 in linkage group 19, complete sequence Length = 188940 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgag 85 ||||||||||||||||||||| Sbjct: 139189 gtgagtgagcgagcgagcgag 139209
>gb|AC008351.4|AC008351 Drosophila melanogaster, chromosome 2R, region 59A-59C, BAC clone BACR09K23, complete sequence Length = 191438 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgag 85 ||||||||||||||||||||| Sbjct: 17439 gtgagtgagcgagcgagcgag 17459
>emb|BX005074.10| Zebrafish DNA sequence from clone CH211-146J7 in linkage group 8, complete sequence Length = 153989 Score = 42.1 bits (21), Expect = 0.93 Identities = 27/29 (93%) Strand = Plus / Plus Query: 56 cgtgcgtgtgtgagtgagcgagcgagcga 84 |||| ||| |||||||||||||||||||| Sbjct: 114258 cgtgagtgggtgagtgagcgagcgagcga 114286
>gb|AC009183.5|AC009183 Drosophila melanogaster, chromosome 3R, region 85F-85F, BAC clone BACR39F04, complete sequence Length = 192055 Score = 42.1 bits (21), Expect = 0.93 Identities = 27/29 (93%) Strand = Plus / Plus Query: 56 cgtgcgtgtgtgagtgagcgagcgagcga 84 |||||||||||| ||| |||||||||||| Sbjct: 155123 cgtgcgtgtgtgtgtgtgcgagcgagcga 155151
>gb|AE003685.5| Drosophila melanogaster chromosome 3R, section 23 of 118 of the complete sequence Length = 241476 Score = 42.1 bits (21), Expect = 0.93 Identities = 27/29 (93%) Strand = Plus / Plus Query: 56 cgtgcgtgtgtgagtgagcgagcgagcga 84 |||||||||||| ||| |||||||||||| Sbjct: 213738 cgtgcgtgtgtgtgtgtgcgagcgagcga 213766
>gb|AE003458.3| Drosophila melanogaster chromosome 2R, section 66 of 73 of the complete sequence Length = 302225 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgag 85 ||||||||||||||||||||| Sbjct: 180633 gtgagtgagcgagcgagcgag 180653
>gb|AC110730.10| Mus musculus chromosome 18, clone RP23-315I21, complete sequence Length = 223107 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 tgagtgagcgagcgagcgagc 86 ||||||||||||||||||||| Sbjct: 25320 tgagtgagcgagcgagcgagc 25340
>emb|AL935160.11| Zebrafish DNA sequence from clone CH211-184C7 in linkage group 12, complete sequence Length = 140401 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgag 85 ||||||||||||||||||||| Sbjct: 45960 gtgagtgagcgagcgagcgag 45980
>emb|CR456684.10| Zebrafish DNA sequence from clone DKEY-46I8 in linkage group 12, complete sequence Length = 262809 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcgag 85 ||||||||||||||||||||| Sbjct: 185266 gtgagtgagcgagcgagcgag 185246
>gb|L12544.1|DROP2A02 Drosophila melanogaster phosphoprotein phosphatase 2A 55 kDa regulatory subunit gene, exons 2, 3 and 4 Length = 2246 Score = 42.1 bits (21), Expect = 0.93 Identities = 27/29 (93%) Strand = Plus / Minus Query: 56 cgtgcgtgtgtgagtgagcgagcgagcga 84 |||||||||||| ||| |||||||||||| Sbjct: 1707 cgtgcgtgtgtgtgtgtgcgagcgagcga 1679
>emb|AL611931.22| Mouse DNA sequence from clone RP23-460D14 on chromosome 4, complete sequence Length = 201635 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgag 85 ||||||||||||||||||||| Sbjct: 56795 gtgagtgagcgagcgagcgag 56815
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 gcgccaaggcggagatctac 166 |||||||||||||||||||| Sbjct: 282694 gcgccaaggcggagatctac 282675
>gb|AC167963.5| Mus musculus chromosome 1, clone RP24-171A4, complete sequence Length = 172954 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gagcgagctcagggaaacca 98 |||||||||||||||||||| Sbjct: 135311 gagcgagctcagggaaacca 135292
>gb|AC161411.11| Mus musculus chromosome 1, clone RP24-223E1, complete sequence Length = 154942 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 gagcgagctcagggaaacca 98 |||||||||||||||||||| Sbjct: 97840 gagcgagctcagggaaacca 97859
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05, complete sequence Length = 143400 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gtgagcgagcgagcgagctc 88 |||||||||||||||||||| Sbjct: 2063 gtgagcgagcgagcgagctc 2044
>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11, complete sequence Length = 177574 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gtgagcgagcgagcgagctc 88 |||||||||||||||||||| Sbjct: 136644 gtgagcgagcgagcgagctc 136625
>gb|AF146636.1| Hoplostethus atlanticus clone Hat2a microsatellite sequence Length = 185 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcga 84 |||||||||||||||||||| Sbjct: 148 gtgagtgagcgagcgagcga 129
>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence Length = 355714 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 177990 gagtgagcgagcgagcgagc 177971
>gb|AC164096.3| Mus musculus BAC clone RP23-356H17 from chromosome 8, complete sequence Length = 229851 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcga 84 |||||||||||||||||||| Sbjct: 44863 gtgagtgagcgagcgagcga 44844
>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence Length = 131860 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcga 84 |||||||||||||||||||| Sbjct: 115278 gtgagtgagcgagcgagcga 115259
>gb|AC113533.14| Mus musculus chromosome 5, clone RP23-52A21, complete sequence Length = 206930 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 106837 gagtgagcgagcgagcgagc 106856
>gb|AY583463.1| Marchantia polymorpha delta6 fatty acid desaturase (DES6) gene, complete cds Length = 3175 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 299 gagtgagcgagcgagcgagc 318
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 cggcgacgcggcggggcagg 188 |||||||||||||||||||| Sbjct: 1229103 cggcgacgcggcggggcagg 1229122
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcga 84 |||||||||||||||||||| Sbjct: 3050 gtgagtgagcgagcgagcga 3031
>gb|AC090046.10| Mus musculus chromosome 6, clone RP23-82P24, complete sequence Length = 179099 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtgagtgagcgagcgagcg 83 |||||||||||||||||||| Sbjct: 73188 tgtgagtgagcgagcgagcg 73169
>gb|AC101796.8| Mus musculus chromosome 1, clone RP24-206P18, complete sequence Length = 171181 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 122493 gagtgagcgagcgagcgagc 122474
>gb|AC122228.4| Mus musculus BAC clone RP23-131N12 from chromosome 12, complete sequence Length = 202970 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcgagctc 88 ||||| |||||||||||||||||| Sbjct: 146887 gtgagcgagcgagcgagcgagctc 146910
>gb|AC121977.3| Mus musculus BAC clone RP24-287A16 from chromosome 6, complete sequence Length = 186279 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgtgagtgagcgagcgagcg 83 |||||||||||||||||||| Sbjct: 22986 tgtgagtgagcgagcgagcg 23005
>gb|AC140332.3| Mus musculus BAC clone RP23-408K9 from chromosome 19, complete sequence Length = 206515 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 65487 gagtgagcgagcgagcgagc 65506
>gb|AC163994.4| Mus musculus chromosome 1, clone RP24-132H2, complete sequence Length = 160383 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 143594 gagtgagcgagcgagcgagc 143575
>gb|AC134382.13| Mus musculus strain C57BL/6J clone rp23-167l1, complete sequence Length = 194086 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 56443 gagtgagcgagcgagcgagc 56424
>emb|AL445664.14| Human DNA sequence from clone RP11-343J18 on chromosome 9 Contains part of a novel gene, the 3' end of a novel gene and a CpG island, complete sequence Length = 161002 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gcggctgatgctggcggaga 215 |||||||||||||||||||| Sbjct: 44646 gcggctgatgctggcggaga 44627
>emb|AL136131.15| Human DNA sequence from clone RP1-261G23 on chromosome 6p12.2-21.1 Contains the KIAA0110 gene, the FLJ30845 gene, the MRPS18A gene for mitochondrial ribosomal protein S18A, a pseudogene similar to OPA-interacting protein (OIP21) a novel gene, the VEGF gene for vascular endothelial growth factor and two CpG islands, complete sequence Length = 172033 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 147876 gagtgagcgagcgagcgagc 147895
>emb|AL050320.19|HSJ1077I2 Human DNA sequence from clone RP5-1077I2 on chromosome 20 Contains the 3' end of the SPTLC2L gene for serine palmitoyltransferase long chain base subunit 2-like (aminotransferase 2), the 5' end of C20orf82 gene for a novel protein similar to Xenopus Isthmin protein, two novel genes and a putative CpG island, complete sequence Length = 107057 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 agctgaagcaagcaagcaaa 52 |||||||||||||||||||| Sbjct: 88327 agctgaagcaagcaagcaaa 88346
>emb|X03018.1|XLHISH3A Xenopus laevis histone gene cluster XlH3-A with genes H1A, H2B, H3 and H4 Length = 8592 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 agtgagcgagcgagcgagct 87 |||||||||||||||||||| Sbjct: 1269 agtgagcgagcgagcgagct 1250
>gb|AC163635.5| Mus musculus BAC clone RP23-183F13 from chromosome 17, complete sequence Length = 185844 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 47466 gagtgagcgagcgagcgagc 47485
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ggccggcgacgatgccgatg 127 |||||||||||||||||||| Sbjct: 3817667 ggccggcgacgatgccgatg 3817686
>gb|AC153894.8| Mus musculus 6 BAC RP23-118E20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216116 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 tgagtgagcgagcgagcgag 85 |||||||||||||||||||| Sbjct: 91433 tgagtgagcgagcgagcgag 91414
>gb|AC164626.6| Mus musculus 6 BAC RP23-472D18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190308 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtgagtgagcgagcgagcg 83 |||||||||||||||||||| Sbjct: 156429 tgtgagtgagcgagcgagcg 156410
>emb|BX663528.10| Zebrafish DNA sequence from clone DKEYP-47F9 in linkage group 17, complete sequence Length = 193986 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcga 84 |||||||||||||||||||| Sbjct: 148261 gtgagtgagcgagcgagcga 148280
>gb|AC150419.2| Branchiostoma floridae clone CH302-73J11, complete sequence Length = 185777 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 gtgtgagtgagcgagcgagcgagc 86 ||||||||||| |||||||||||| Sbjct: 24049 gtgtgagtgagtgagcgagcgagc 24072
>emb|BX936438.22| Zebrafish DNA sequence from clone CH211-255D18 in linkage group 20 Contains the lsm4 gene for LSM4 homolog U6 small nuclear RNA associated (S. cerevisiae), the gene for a novel protein similar to vertebrate phosphodiesterase 4 family cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila) (PDE4), the ddx49 gene for DEAD (Asp-Glu-Ala-Asp) box polypeptide 49, the gene for a novel protein similar to vertebrate RAB3A member RAS oncogene family (RAB3A), the 5' end of a novel gene, two novel genes and four CpG islands, complete sequence Length = 188269 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 90119 gagtgagcgagcgagcgagc 90138
>gb|AC104142.6| Drosophila melanogaster X BAC RP98-13K19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 186753 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 11980 gagtgagcgagcgagcgagc 11961
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 cgccaaggcggagatctacaccgg 171 ||||||||||||||||| |||||| Sbjct: 2387660 cgccaaggcggagatcttcaccgg 2387683
>emb|BX323861.10| Zebrafish DNA sequence from clone CH211-209F23 in linkage group 2, complete sequence Length = 173663 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 tgagtgagcgagcgagcgag 85 |||||||||||||||||||| Sbjct: 61397 tgagtgagcgagcgagcgag 61378
>gb|AY094680.1| Drosophila melanogaster GH06335 full insert cDNA Length = 3984 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 3119 gagtgagcgagcgagcgagc 3138
>ref|NM_130635.2| Drosophila melanogaster CG3078-RA (CG3078), mRNA Length = 3983 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 3133 gagtgagcgagcgagcgagc 3152
>gb|AC005302.70| Mus musculus strain 129S6/SvEvTac chromosome 10 clone rp21-481n4, complete sequence Length = 204653 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 142216 gagtgagcgagcgagcgagc 142235
>gb|AC104149.6| Drosophila melanogaster X BAC RP98-48O22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 193714 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 88146 gagtgagcgagcgagcgagc 88127
>gb|AF437895.1|AF437895 Homo sapiens vascular endothelial growth factor (VEGF) gene, partial cds Length = 15442 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 9893 gagtgagcgagcgagcgagc 9912
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 gccggcgacgatgccgatgc 128 |||||||||||||||||||| Sbjct: 758832 gccggcgacgatgccgatgc 758813
>gb|AC162182.2| Mus musculus BAC clone RP23-73B23 from chromosome 17, complete sequence Length = 205221 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 92862 gagtgagcgagcgagcgagc 92843
>gb|S69089.1| H1A=somatic H1 histone [Xenopus laevis, Genomic, 1022 nt] Length = 1022 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 agtgagcgagcgagcgagct 87 |||||||||||||||||||| Sbjct: 772 agtgagcgagcgagcgagct 753
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcga 84 |||||||||||||||||||| Sbjct: 22413643 gtgagtgagcgagcgagcga 22413624 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gtgagcgagcgagcgagctc 88 |||||||||||||||||||| Sbjct: 16050893 gtgagcgagcgagcgagctc 16050874
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gcagctgaagcaagcaagca 50 |||||||||||||||||||| Sbjct: 24330397 gcagctgaagcaagcaagca 24330378
>gb|AC093028.13| Homo sapiens 12 BAC RP11-604N13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153517 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 4595 gagtgagcgagcgagcgagc 4576
>gb|AC098590.3| Homo sapiens BAC clone RP11-324J13 from 4, complete sequence Length = 157544 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 cgaaaccacacaagtgagct 29 |||||||||||||||||||| Sbjct: 12465 cgaaaccacacaagtgagct 12484
>gb|AC068947.17| Mus Musculus Strain C57BL6/J Chromosome 3 BAC, RP23-108E10, complete sequence Length = 211512 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcga 84 |||||||||||||||||||| Sbjct: 152666 gtgagtgagcgagcgagcga 152685
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ggccggcgacgatgccgatg 127 |||||||||||||||||||| Sbjct: 4463457 ggccggcgacgatgccgatg 4463476
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gcagctgaagcaagcaagca 50 |||||||||||||||||||| Sbjct: 76301 gcagctgaagcaagcaagca 76282
>ref|XM_319743.2| Anopheles gambiae str. PEST ENSANGP00000017235 (ENSANGG00000014746), partial mRNA Length = 1109 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gcaaagctcgtgcgtgtgtg 67 |||||||||||||||||||| Sbjct: 74 gcaaagctcgtgcgtgtgtg 93
>emb|CR936278.9| Zebrafish DNA sequence from clone CH211-46O5 in linkage group 19, complete sequence Length = 146216 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 7203 gagtgagcgagcgagcgagc 7184
>gb|AC132132.4| Mus musculus BAC clone RP23-235K2 from 8, complete sequence Length = 198321 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gtgagtgagcgagcgagcga 84 |||||||||||||||||||| Sbjct: 41361 gtgagtgagcgagcgagcga 41380
>emb|CR391947.13| Zebrafish DNA sequence from clone DKEYP-88A4 in linkage group 1, complete sequence Length = 167207 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 gtgtgagtgagcgagcgagcgagc 86 ||||||| |||||||||||||||| Sbjct: 30282 gtgtgagcgagcgagcgagcgagc 30305
>gb|AE003423.2| Drosophila melanogaster chromosome X, section 7 of 74 of the complete sequence Length = 292830 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 188887 gagtgagcgagcgagcgagc 188868
>dbj|AP002379.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-463F4, complete sequence Length = 215986 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 190483 gagtgagcgagcgagcgagc 190502
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 cagctgaagcaagcaagcaaagct 55 |||||| ||||||||||||||||| Sbjct: 1599558 cagctgcagcaagcaagcaaagct 1599535
>gb|AC154013.4| Mus musculus 6 BAC RP24-124B23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151057 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 tgagtgagcgagcgagcgag 85 |||||||||||||||||||| Sbjct: 114928 tgagtgagcgagcgagcgag 114909
>emb|AL121992.24|HSDJ680D5 Human DNA sequence from clone RP4-680D5 on chromosome 1p36.13-36.31 Contains the 3' end of the gene for a novel DnaJ domain-containing protein (KIAA0962, FLJ13743, FLJ12468), the AGMAT gene for agmatine ureohydrolase (agmatinase), a novel gene (FLJ34180), a novel pseudogene similar to Mus musculus ethanol induced 6 (Etohi6), a CD24 antigen (small cell lung carcinoma cluster 4 antigen) (CD24) pseudogene, the gene for DNA-damage inducible protein 2 (DDI2), the RSC1A1 gene for regulatory solute carrier protein family 1 member 1 and the 5' end of the gene for a novel RUN and PH domain-containing protein (KIAA0842), complete sequence Length = 170399 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 gcgtgtgtgagtgagcgagcgagcgagc 86 ||||||||||| ||| |||||||||||| Sbjct: 81702 gcgtgtgtgagggagggagcgagcgagc 81729
>gb|AC122513.5| Mus musculus BAC clone RP24-455A5 from 3, complete sequence Length = 164485 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcga 84 |||||||||||||||||||| Sbjct: 14291 gtgagtgagcgagcgagcga 14272
>gb|AC140224.4| Mus musculus BAC clone RP24-483E8 from 1, complete sequence Length = 175026 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagctgaagcaagcaagcaa 51 |||||||||||||||||||| Sbjct: 74530 cagctgaagcaagcaagcaa 74511
>gb|AC149086.4| Mus musculus BAC clone RP24-245L1 from 19, complete sequence Length = 185283 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 8726 gagtgagcgagcgagcgagc 8707
>dbj|AB209485.1| Homo sapiens mRNA for vascular endothelial growth factor variant protein Length = 12171 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 7844 gagtgagcgagcgagcgagc 7863
>gb|AC171269.2| Mus musculus chromosome 3, clone wi1-1865E14, complete sequence Length = 35132 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcga 84 |||||||||||||||||||| Sbjct: 29864 gtgagtgagcgagcgagcga 29845
>emb|AL929399.6| Mouse DNA sequence from clone RP23-59E24 on chromosome 4, complete sequence Length = 120490 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gtgagtgagcgagcgagcga 84 |||||||||||||||||||| Sbjct: 106528 gtgagtgagcgagcgagcga 106509
>gb|M21287.1|XELHX1H3 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster X1h3 Length = 8608 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 agtgagcgagcgagcgagct 87 |||||||||||||||||||| Sbjct: 1279 agtgagcgagcgagcgagct 1260
>emb|AL009195.1|DMC30B8 Drosophila melanogaster cosmid clone 30B8 Length = 38125 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gagtgagcgagcgagcgagc 86 |||||||||||||||||||| Sbjct: 31924 gagtgagcgagcgagcgagc 31905 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,984,806 Number of Sequences: 3902068 Number of extensions: 1984806 Number of successful extensions: 72527 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71329 Number of HSP's gapped (non-prelim): 1184 length of query: 283 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 261 effective length of database: 17,147,199,772 effective search space: 4475419140492 effective search space used: 4475419140492 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
