>VE6_HPV94 (Q705D2) Protein E6|
          Length = 148

 Score = 32.0 bits (71), Expect = 0.43
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +1

Query: 124 MKTRRGACYSCHEP-AAEEPEMHRRKRRR 207
           + T++  CY+CH+P   EE + HR +RRR
Sbjct: 95  INTQQIRCYTCHKPLVKEEKDRHRNERRR 123

>VE6_HPV28 (P50802) Protein E6|
          Length = 146

 Score = 31.2 bits (69), Expect = 0.73
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 130 TRRGACYSCHEP-AAEEPEMHRRKRRR 207
           T++  CY CH+P   EE + HR +RRR
Sbjct: 95  TQQVRCYMCHKPLVKEEKDRHRNERRR 121

>VE6_HPV10 (P36802) Protein E6|
          Length = 148

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +1

Query: 145 CYSCHEP-AAEEPEMHRRKRRR 207
           CY CH+P   EE + HR +RRR
Sbjct: 102 CYMCHKPLVREEKDRHRNERRR 123

>VE6_HPV03 (P36799) Protein E6|
          Length = 152

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 130 TRRGACYSCHEP-AAEEPEMHRRKRRR 207
           T++  CY CH+P   EE + HR ++RR
Sbjct: 101 TQQIRCYMCHKPLVKEEKDRHRNEKRR 127

>VE6_HPV29 (P50803) Protein E6|
          Length = 148

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +1

Query: 145 CYSCHEP-AAEEPEMHRRKRRR 207
           CY CH+P   EE + HR ++RR
Sbjct: 102 CYMCHKPLVREEKDKHRNEKRR 123

>PTFAX_XANCP (P45597) Multiphosphoryl transfer protein (MTP) [Includes:|
           Phosphoenolpyruvate-protein phosphotransferase (EC
           2.7.3.9) (Phosphotransferase system enzyme I);
           Phosphocarrier protein HPr (Protein H);
           Fructose-specific phosphotransferase enzyme I
          Length = 838

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 135 PRLHAACPRSTMRRPCYVVAGGELLQVLDG 46
           P  H A    T+  P  V AGG+LL + DG
Sbjct: 457 PTSHTAILSRTLGLPALVAAGGQLLDIEDG 486

>H2B1_STRPU (P06145) Histone H2B.1, sperm|
          Length = 139

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 76  RNDVTRTPHRGTGAGGMKTRRGACYSCHEPAAEEPEMHRRKRRR 207
           R+   R+P +G G GG  ++RG        AA    + RR+RRR
Sbjct: 9   RSPTKRSPQKGAGKGGKGSKRGGKARRRGGAA----VRRRRRRR 48


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.130    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,566,201
Number of Sequences: 219361
Number of extensions: 458662
Number of successful extensions: 1445
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)