>RNS1_ARATH (P42813) Ribonuclease 1 precursor (EC 3.1.27.1)|
          Length = 230

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
 Frame = +3

Query: 72  ALLCLLGMLI----ASSAIAVSDSGIYYQIGLMWPGAYCVQTTGGCCMPKSPIVPAADFY 239
           A LCL+ +L+      SA + S+   ++     WPG+YC  T   CC P S   PAADF 
Sbjct: 6   ASLCLISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYC-DTQKKCCYPNSG-KPAADFG 63

Query: 240 VSGFTVLNATTDAPETSCSSTPFNSDEILG-ISGLRQYWSNIKCP 371
           + G          P    +S PF+S  I   ++ +++ W  + CP
Sbjct: 64  IHGLWPNYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACP 108

>RNLE_LYCES (P80022) Extracellular ribonuclease LE precursor (EC 3.1.27.1)|
           (RNase LE)
          Length = 230

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
 Frame = +3

Query: 60  AFRRALLCLLGMLIASSAIAVSDSGIYYQIGLMWPGAYCVQTTGGCCMPKSPIVPAADFY 239
           AF   L+ L+     S   A  D   +Y +   WPG+YC  T   CC P +   PAADF 
Sbjct: 6   AFSLFLILLIITQCLSVLNAAKDFDFFYFVQ-QWPGSYC-DTKQSCCYPTTG-KPAADFG 62

Query: 240 VSGFTVLNATTDAPETSCSSTPFNSDEILG-ISGLRQYWSNIKCP 371
           + G    N     P     ++P++  +I   IS ++Q W  + CP
Sbjct: 63  IHGLWPNNNDGTYPSNCDPNSPYDQSQISDLISSMQQNWPTLACP 107

>RNS3_ARATH (P42815) Ribonuclease 3 precursor (EC 3.1.27.1)|
          Length = 222

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
 Frame = +3

Query: 57  MAFRRALLCLLGMLIASSAIAVSDSGIYYQIGLMWPGAYCVQTTGGCCMPKSPIVPAADF 236
           M F   +L L  + + S A    D   +Y + L WPGAYC  +   CC P++   PAADF
Sbjct: 1   MKFFIFILALQQLYVQSFA---QDFDFFYFV-LQWPGAYC-DSRHSCCYPQTG-KPAADF 54

Query: 237 YVSGFTVLNATTDAPETSCSSTPFNSDEILGI-SGLRQYWSNIKCP 371
            + G      T   P+     + F+   +  + S L++ W  + CP
Sbjct: 55  GIHGLWPNYKTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCP 100

>RNS2_ARATH (P42814) Ribonuclease 2 precursor (EC 3.1.27.1)|
          Length = 259

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 15/112 (13%)
 Frame = +3

Query: 78  LCLLGMLIASSAIAVSDSGI----------YYQIGLMWPGAYCVQTTGGCCMPKSPIVPA 227
           LCLL +L+A  A A +   I          Y+ + L WPG YC + T  CC  K+     
Sbjct: 5   LCLL-LLVACIAGAFAGDVIELNRSQREFDYFALSLQWPGTYC-RGTRHCC-SKNACCRG 61

Query: 228 ADFYVSGFTVLNATTDAPETS----CSSTPFNSDEILGI-SGLRQYWSNIKC 368
           +D   + FT+     D  + S    C  + F   EI  +  GL +YW ++ C
Sbjct: 62  SD-APTQFTIHGLWPDYNDGSWPSCCYRSDFKEKEISTLMDGLEKYWPSLSC 112

>RNS4_ANTHI (Q38717) Ribonuclease S-4 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 4) (S4-RNase)
          Length = 233

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 21/78 (26%), Positives = 42/78 (53%)
 Frame = +3

Query: 75  LLCLLGMLIASSAIAVSDSGIYYQIGLMWPGAYCVQTTGGCCMPKSPIVPAADFYVSGFT 254
           ++C++ +   S+ IA  D   Y ++ L WP ++C+  +  C   ++P+   ++F + G  
Sbjct: 17  VVCVVPLNCCSTIIAKCD---YLKLVLQWPKSFCLINSRKC--QRNPL--PSNFTIHGLW 69

Query: 255 VLNATTDAPETSCSSTPF 308
             N T  AP+ SC++  F
Sbjct: 70  PDNYTRQAPQ-SCTTNNF 86

>Y4RN_RHISN (P55647) Hypothetical transport protein y4rN|
          Length = 405

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 19/49 (38%), Positives = 21/49 (42%)
 Frame = -2

Query: 322 ISSELKGVLLQLVSGASVVAFKTVKPET*KSAAGTMGLLGMQHPPVVCT 176
           I S L GVLL  V     V    +      +A    G LG   PPVVCT
Sbjct: 64  IVSPLAGVLLDCVGPTIAVRIDMIASTAFITAISLAGWLGWSSPPVVCT 112

>Y1319_METJA (Q58715) Hypothetical sodium-dependent transporter MJ1319|
          Length = 492

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +3

Query: 3   ISALVRNVERS--EIKQGFGMAFRRALLCLLGMLIASSAIAVSDSGIYY 143
           IS+ V  VE S   I   F ++ ++ALL +L + I  S I  + +G+YY
Sbjct: 333 ISSAVSIVEASVSAIIDKFSLSRKKALLAVLALFIIISPIFTTGAGLYY 381

>DUOX_DROME (Q9VQH2) Dual oxidase (EC 1.6.3.1) (EC 1.11.1.-)|
          Length = 1475

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +3

Query: 42  KQGFGMAFRR-ALLCLLGMLIASSAIAVSDSG 134
           K G G  F R ALL   G L+A+  +  S+SG
Sbjct: 63  KDGLGSKFNRTALLAFFGQLVANEIVMASESG 94

>PERN_IPOBA (O04796) Neutral peroxidase precursor (EC 1.11.1.7) (SwPN1)|
          Length = 348

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 222 PAADFYVSGFTVLNATTDAPETSCSSTPFNSDEILGIS 335
           PA    V GF+V++      +T C+ TP +  ++L I+
Sbjct: 126 PANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIA 163

>DLL3_HUMAN (Q9NYJ7) Delta-like protein 3 precursor (Drosophila Delta homolog|
           3)
          Length = 618

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 4/74 (5%)
 Frame = +3

Query: 159 WPGAYCVQ--TTGGCCMPKSPIVPAADFYVSGFTVLNATTDAPETSCSSTP--FNSDEIL 326
           W G  C    +T  C  P+ P        V G    +    A   SCS TP  F      
Sbjct: 243 WTGPLCTVPVSTSSCLSPRGPSSATTGCLVPGPGPCDGNPCANGGSCSETPRSFECTCPR 302

Query: 327 GISGLRQYWSNIKC 368
           G  GLR   S + C
Sbjct: 303 GFYGLRCEVSGVTC 316

>NUHM_BOVIN (P04394) NADH-ubiquinone oxidoreductase 24 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Polypeptide II)
          Length = 249

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 134 TRIRNGNGRGSYQHAKKAQQCSPESHTETLLDFTPFN 24
           T ++NG G   + H       +PE++ ET  DFTP N
Sbjct: 28  TAVQNGAGGALFVHRD-----TPENNPETPFDFTPEN 59

>GLUD_COREF (Q8RQL4) Glutamate transport system permease protein gluD|
          Length = 277

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 69  RALLCLLGMLIASSAIAVSDSGIYYQIG 152
           +A+  +L  LIA   IA+ DS + YQIG
Sbjct: 157 QAVAAMLPALIAQMVIALKDSALGYQIG 184

>VG77_ICHV1 (Q00149) Hypothetical gene 77 protein|
          Length = 228

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -3

Query: 192 RRWSAHSMLPATSNQSGSRYQNQKRQWQRKLSACQEGTTV 73
           + WS+   +P  SN+S  RY +    W   L+  ++GTT+
Sbjct: 35  KHWSSGFPIPENSNRSTGRYDD----WVYDLARTKKGTTL 70


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,075,121
Number of Sequences: 219361
Number of extensions: 819246
Number of successful extensions: 2351
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2350
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)