ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet72a01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo... 112 2e-25
2CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo... 111 5e-25
3CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo... 101 5e-22
4CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast... 62 3e-10
5CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29 59 4e-09
6CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla... 57 9e-09
7CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla... 47 1e-05
8CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch... 46 3e-05
9CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla... 46 3e-05
10CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro... 46 3e-05
11CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch... 45 6e-05
12CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop... 44 7e-05
13CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl... 44 1e-04
14LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre... 42 4e-04
15LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre... 37 0.016
16VNUA_PRVKA (P33485) Probable nuclear antigen 34 0.10
17CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ... 32 0.29
18CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe... 32 0.29
19CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl... 32 0.29
20CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop... 32 0.38
21CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe... 32 0.50
22CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ... 32 0.50
23CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast... 31 0.65
24CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla... 31 0.85
25CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl... 31 0.85
26CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl... 31 0.85
27CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla... 31 0.85
28CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl... 31 0.85
29CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast... 31 0.85
30COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemph... 31 0.85
31CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla... 30 1.1
32CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop... 30 1.1
33CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl... 30 1.1
34CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type... 30 1.1
35CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla... 30 1.1
36CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast... 30 1.1
37CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ... 30 1.1
38CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor 30 1.5
39CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop... 30 1.5
40CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl... 30 1.9
41CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor 30 1.9
42HNRL1_MOUSE (Q8VDM6) Heterogeneous nuclear ribonucleoprotein U-l... 30 1.9
43CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type... 29 2.5
44CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl... 29 2.5
45CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast... 29 2.5
46CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl... 29 2.5
47CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla... 29 2.5
48CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl... 29 2.5
49CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla... 29 2.5
50CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla... 29 2.5
51CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl... 29 2.5
52CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl... 29 2.5
53CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast... 29 2.5
54CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl... 29 2.5
55CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl... 29 2.5
56CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl... 29 2.5
57CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla... 29 2.5
58CO6A3_CHICK (P15989) Collagen alpha-3(VI) chain precursor 29 2.5
59CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty... 29 2.5
60CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast... 29 3.2
61PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regula... 29 3.2
62DHGY_HYPME (P36234) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-... 29 3.2
63CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla... 28 4.2
64CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla... 28 4.2
65CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla... 28 4.2
66CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe... 28 4.2
67CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl... 28 4.2
68CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast... 28 4.2
69CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ... 28 4.2
70CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla... 28 4.2
71CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ... 28 4.2
72CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla... 28 4.2
73CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast... 28 4.2
74CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop... 28 5.5
75GATA5_ARATH (Q8VZP4) GATA transcription factor 5 (AtGATA-5) 28 5.5
76CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type... 28 7.2
77CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl... 28 7.2
78CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop... 27 9.4
79CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Conta... 27 9.4
80PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regula... 27 9.4
81CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contain... 27 9.4

>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score =  112 bits (281), Expect = 2e-25
 Identities = 54/88 (61%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
 Frame = +3

Query: 96  TFLGTRL-ADPAPQNGRIVARFGFGXXXXXXXXXXXXXTTDRPLWFPGAQAPEYLDGTLV 272
           + +GTR+ +D +  + R  ARFGFG             + DRPLWFPGA++PEYLDG+LV
Sbjct: 12  SIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKTVIS-DRPLWFPGAKSPEYLDGSLV 70

Query: 273 GDYGFDPFGLGKPAEYLQYDVDSLDQNL 356
           GDYGFDPFGLGKPAEYLQ+D+DSLDQNL
Sbjct: 71  GDYGFDPFGLGKPAEYLQFDLDSLDQNL 98



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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score =  111 bits (277), Expect = 5e-25
 Identities = 54/89 (60%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
 Frame = +3

Query: 96  TFLGTRLADPA-PQNGRIVARFGFGXXXXX-XXXXXXXXTTDRPLWFPGAQAPEYLDGTL 269
           + +GTR+A    P +GR  A FGFG              TTDRPLW+PGA +P++LDG+L
Sbjct: 13  SIMGTRVAPGIHPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYPGAISPDWLDGSL 72

Query: 270 VGDYGFDPFGLGKPAEYLQYDVDSLDQNL 356
           VGDYGFDPFGLGKPAEYLQ+D+DSLDQNL
Sbjct: 73  VGDYGFDPFGLGKPAEYLQFDIDSLDQNL 101



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>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score =  101 bits (251), Expect = 5e-22
 Identities = 49/89 (55%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
 Frame = +3

Query: 105 GTRLADPAPQNGRIVARFGFGXXXXXXX-----XXXXXXTTDRPLWFPGAQAPEYLDGTL 269
           G R+ DP P  GR+ ARFGF                     DR +WFPGA  PE+LDG++
Sbjct: 14  GIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGANPPEWLDGSM 73

Query: 270 VGDYGFDPFGLGKPAEYLQYDVDSLDQNL 356
           +GD GFDPFGLGKPAEYLQYD D LDQNL
Sbjct: 74  IGDRGFDPFGLGKPAEYLQYDFDGLDQNL 102



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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 25/43 (58%), Positives = 33/43 (76%)
 Frame = +3

Query: 213 DRPLWFPGAQAPEYLDGTLVGDYGFDPFGLGKPAEYLQYDVDS 341
           DRPLWFPG+  PE+LDG+L GD+GFDP GLG   E L+++  +
Sbjct: 64  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQA 106



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>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 25/44 (56%), Positives = 30/44 (68%)
 Frame = +3

Query: 222 LWFPGAQAPEYLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQN 353
           LW P    PE+LDG+L GD GFDP GL KP+E++   VD  DQN
Sbjct: 51  LWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQN 94



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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 57.4 bits (137), Expect = 9e-09
 Identities = 23/40 (57%), Positives = 30/40 (75%)
 Frame = +3

Query: 213 DRPLWFPGAQAPEYLDGTLVGDYGFDPFGLGKPAEYLQYD 332
           DRPLWFPG+  P +LDG+L GD+GFDP GL    E L+++
Sbjct: 64  DRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWN 103



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>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 22/69 (31%), Positives = 32/69 (46%)
 Frame = +3

Query: 135 NGRIVARFGFGXXXXXXXXXXXXXTTDRPLWFPGAQAPEYLDGTLVGDYGFDPFGLGKPA 314
           +GR+     F                 +  W PG  +P+YL G+L GD GFDP GL +  
Sbjct: 27  SGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDP 86

Query: 315 EYLQYDVDS 341
           E L++ V +
Sbjct: 87  ENLKWFVQA 95



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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 6/41 (14%)
 Frame = +3

Query: 225 WFPGAQA------PEYLDGTLVGDYGFDPFGLGKPAEYLQY 329
           W P  +       PE+LDG+L GDYGFDP GLGK   +L++
Sbjct: 55  WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKW 95



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>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 19/33 (57%), Positives = 22/33 (66%)
 Frame = +3

Query: 213 DRPLWFPGAQAPEYLDGTLVGDYGFDPFGLGKP 311
           +R LWF   Q+  YLDG L GD+GFDP GL  P
Sbjct: 52  NRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDP 84



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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
 Frame = +3

Query: 213 DRPLWFPG-----AQAPEYLDGTLVGDYGFDPFGLG-KPAEYLQYDVDSL 344
           DR ++ P      ++ PEYL+G + GDYG+DPFGLG KP  + +Y    L
Sbjct: 66  DRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFEL 115



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>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 6/41 (14%)
 Frame = +3

Query: 225 WFPGAQA------PEYLDGTLVGDYGFDPFGLGKPAEYLQY 329
           W P  ++      PE+LDG+L GD+GFDP GLGK   +L++
Sbjct: 55  WIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKW 95



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>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 6/41 (14%)
 Frame = +3

Query: 225 WFPGAQA------PEYLDGTLVGDYGFDPFGLGKPAEYLQY 329
           W P  +       PE+LDG+L GD+GFDP GLGK   +L++
Sbjct: 60  WIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKW 100



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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 225 WFPGAQAPEYLDGTLVGDYGFDPFGLGK-PAEYLQYDVDSL 344
           W PG   P YLDG+  GD+GFD  GLG+ PA   +Y    L
Sbjct: 49  WMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESEL 89



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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 17/28 (60%), Positives = 19/28 (67%)
 Frame = +3

Query: 219 PLWFPGAQAPEYLDGTLVGDYGFDPFGL 302
           PLWFP   AP +L+G   GD GFDP GL
Sbjct: 3   PLWFPNTLAPSWLNGEYYGDRGFDPAGL 30



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 17/30 (56%), Positives = 18/30 (60%)
 Frame = +3

Query: 213 DRPLWFPGAQAPEYLDGTLVGDYGFDPFGL 302
           +R LWFP    P YL G   GD GFDP GL
Sbjct: 370 ERELWFPNIVPPRYLTGEAYGDKGFDPAGL 399



 Score = 33.9 bits (76), Expect = 0.10
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +3

Query: 222 LWFPGAQAPEYLDGTLVGDYGFDPFGL 302
           LWFP A+ P  L G    D GFDP  L
Sbjct: 189 LWFPNAEPPALLTGEYPADRGFDPLNL 215



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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 36.6 bits (83), Expect = 0.016
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 222 LWFPGAQAPEYLDGTLVGDYGFDPFGL-GKPAEYLQYDVDSL 344
           +WFPGAQ P +L G    D GFDP  +   P  Y +  V  +
Sbjct: 161 VWFPGAQPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEV 202



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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 21/53 (39%), Positives = 23/53 (43%)
 Frame = +2

Query: 5    RHPNARKGRGGQS*EERVSSHGFVGGRRGEHVPRDPAGGPGAAERAHRGAVRL 163
            R    R GRGG+             GR G   PR   GGPG   RA RG VR+
Sbjct: 1442 RGRGGRGGRGGR-------------GRGGGRAPRGGGGGPGGGGRAGRGEVRV 1481



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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 237 AQAPEYLDGTLVGDYGFDPFGLGKPAE 317
           AQ P YL+G   GDYG+D  GL    E
Sbjct: 64  AQTPSYLNGEFPGDYGWDTAGLSADPE 90



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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = +3

Query: 210 TDRPLW---FPGAQAPEYLDGTLVGDYGFDPFGLGKPAE 317
           +DRPL+   F G+  P YL G   GDYG+D  GL    E
Sbjct: 52  SDRPLYLGPFSGSP-PSYLSGEFPGDYGWDTAGLSADPE 89



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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 237 AQAPEYLDGTLVGDYGFDPFGLGKPAE 317
           AQ P YL+G   GDYG+D  GL    E
Sbjct: 61  AQTPSYLNGEFPGDYGWDTAGLSADPE 87



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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
 Frame = +3

Query: 111 RLADPA---PQNGRIVARFGFGXXXXXXXXXXXXXTTDRPLWFPG---AQAPEYLDGTLV 272
           ++A P+   P +  ++   GF              T DR + + G    + P YL G   
Sbjct: 19  KIAKPSKLNPISSTLIVTAGFTMLKHAAKSKVSSSTCDRRVKYLGPFSGEWPSYLTGEFP 78

Query: 273 GDYGFDPFGL 302
           GDYG+D  GL
Sbjct: 79  GDYGWDTAGL 88



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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 24/87 (27%), Positives = 30/87 (34%), Gaps = 14/87 (16%)
 Frame = +3

Query: 99  FLGTRLADPAPQNG------------RIVARFGFGXXXXXXXXXXXXXTTDRPLWFP--G 236
           F G +L+   PQN             R+  R   G               DR L+     
Sbjct: 16  FAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFS 75

Query: 237 AQAPEYLDGTLVGDYGFDPFGLGKPAE 317
            + P YL G   GDYG+D  GL    E
Sbjct: 76  GEPPSYLTGEFPGDYGWDTAGLSADPE 102



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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +3

Query: 213 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 317
           DRP +      + P YL+G   GDYG+D  GL    E
Sbjct: 56  DRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPE 92



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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 25/82 (30%), Positives = 30/82 (36%), Gaps = 8/82 (9%)
 Frame = +3

Query: 96  TFLGTRLADPAPQNGRIVARFGFGXXXXXXXXXXXXXTT------DRPLWFP--GAQAPE 251
           +FLGT     AP+   +V R G                       DRP +      Q P 
Sbjct: 11  SFLGT-----APRRDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 65

Query: 252 YLDGTLVGDYGFDPFGLGKPAE 317
           YL G   GDYG+D  GL    E
Sbjct: 66  YLTGEFPGDYGWDTAGLSADPE 87



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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 213 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 317
           DRP +      Q P YL G   GDYG+D  GL    E
Sbjct: 25  DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 61



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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 23/87 (26%), Positives = 30/87 (34%), Gaps = 14/87 (16%)
 Frame = +3

Query: 99  FLGTRLADPAPQNG------------RIVARFGFGXXXXXXXXXXXXXTTDRPLWFP--G 236
           F G +L+   PQN             R+  R   G               DR ++     
Sbjct: 16  FAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFS 75

Query: 237 AQAPEYLDGTLVGDYGFDPFGLGKPAE 317
            + P YL G   GDYG+D  GL    E
Sbjct: 76  GEPPSYLTGEFPGDYGWDTAGLSADPE 102



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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 213 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 317
           DRP +      Q P YL G   GDYG+D  GL    E
Sbjct: 53  DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 89



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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 213 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 317
           DRP +      Q P YL G   GDYG+D  GL    E
Sbjct: 53  DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 89



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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 213 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 317
           DRP +      Q P YL G   GDYG+D  GL    E
Sbjct: 53  DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 89



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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 213 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 317
           DRP +      Q P YL G   GDYG+D  GL    E
Sbjct: 52  DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 88



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>COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen|
           2) (180 kDa bullous pemphigoid antigen 2)
          Length = 1497

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = +2

Query: 11  PNARKGRGGQS*EERVSSHGFVGGRRGEHVPRDPAGGPGAAERAHRGA 154
           P   KG+ G   +  +       GR G   PR  AG PG+ E+  RGA
Sbjct: 601 PQGPKGQKGSVGDPGMEGPMGQRGREGPMGPRGEAGPPGSGEKGERGA 648



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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           +AP YL G   GDYG+D  GL    E
Sbjct: 66  EAPSYLTGEFPGDYGWDTAGLSADPE 91



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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           +AP YL G   GDYG+D  GL    E
Sbjct: 66  EAPSYLTGEFPGDYGWDTAGLSADPE 91



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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           +AP YL G   GDYG+D  GL    E
Sbjct: 65  EAPSYLTGEFPGDYGWDTAGLSADPE 90



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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 228 FPGAQAPEYLDGTLVGDYGFDPFGL-GKPAEYLQY 329
           F     PEYL G   GDYG+D  GL   P  + +Y
Sbjct: 45  FSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARY 79



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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 213 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 317
           DRP +      Q P YL G   GDYG+D  GL    E
Sbjct: 53  DRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPE 89



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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           +AP YL G   GDYG+D  GL    E
Sbjct: 63  EAPSYLTGEFPGDYGWDTAGLSADPE 88



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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 213 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 317
           DRP +      Q P YL G   GDYG+D  GL    E
Sbjct: 52  DRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 88



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>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor|
          Length = 1464

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +2

Query: 23  KGRGGQS*EERVSSHGFVGGRRGEHVPRDPAGGPGA 130
           KG GG      ++      G RGEH P  PAG PGA
Sbjct: 778 KGEGGSPGLPGIAGPRGGPGERGEHGPPGPAGFPGA 813



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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 213 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 317
           DRP +      Q P YL G   GDYG+D  GL    E
Sbjct: 53  DRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPE 89



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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGL 302
           +AP YL G   GDYG+D  GL
Sbjct: 65  EAPSYLTGEFPGDYGWDTAGL 85



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>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor|
          Length = 1463

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +2

Query: 23  KGRGGQS*EERVSSHGFVGGRRGEHVPRDPAGGPGA 130
           KG GG      ++      G RGEH P  PAG PGA
Sbjct: 778 KGEGGAPGLPGIAGPRGGPGERGEHGPPGPAGFPGA 813



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>HNRL1_MOUSE (Q8VDM6) Heterogeneous nuclear ribonucleoprotein U-like protein 1|
          Length = 859

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 23  KGRGGQS*EERVSSHGFVGGRRGEHVPRDPAGGPGAAERAHRG 151
           +GRGG    +R  + G  GG RG    R   GG G     +RG
Sbjct: 618 RGRGGGGGFQRYDNRGPPGGNRGGFQNRGGGGGSGGGGGNYRG 660



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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
 Frame = +3

Query: 213 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 317
           DR  W        P YL G   GDYG+D  GL    E
Sbjct: 43  DRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPE 79



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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           ++P YL G   GDYG+D  GL    E
Sbjct: 66  ESPSYLTGEFPGDYGWDTAGLSADPE 91



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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           ++P YL G   GDYG+D  GL    E
Sbjct: 66  ESPSYLTGEFPGDYGWDTAGLSADPE 91



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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           ++P YL G   GDYG+D  GL    E
Sbjct: 66  ESPSYLTGEFPGDYGWDTAGLSADPE 91



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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           ++P YL G   GDYG+D  GL    E
Sbjct: 65  ESPSYLTGEFPGDYGWDTAGLSADPE 90



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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           ++P YL G   GDYG+D  GL    E
Sbjct: 66  ESPSYLTGEFPGDYGWDTAGLSADPE 91



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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           ++P YL G   GDYG+D  GL    E
Sbjct: 66  ESPSYLTGEFPGDYGWDTAGLSADPE 91



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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           ++P YL G   GDYG+D  GL    E
Sbjct: 65  ESPSYLTGEFPGDYGWDTAGLSADPE 90



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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           ++P YL G   GDYG+D  GL    E
Sbjct: 65  ESPSYLTGEFPGDYGWDTAGLSADPE 90



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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           ++P YL G   GDYG+D  GL    E
Sbjct: 65  ESPSYLTGEFPGDYGWDTAGLSADPE 90



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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           ++P YL G   GDYG+D  GL    E
Sbjct: 67  ESPSYLTGEFPGDYGWDTAGLSADPE 92



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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           ++P YL G   GDYG+D  GL    E
Sbjct: 64  ESPSYLTGEFPGDYGWDTAGLSADPE 89



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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           ++P YL G   GDYG+D  GL    E
Sbjct: 64  ESPSYLTGEFPGDYGWDTAGLSADPE 89



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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           ++P YL G   GDYG+D  GL    E
Sbjct: 68  ESPSYLTGEFPGDYGWDTAGLSADPE 93



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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           ++P YL G   GDYG+D  GL    E
Sbjct: 63  ESPSYLTGEFPGDYGWDTAGLSADPE 88



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>CO6A3_CHICK (P15989) Collagen alpha-3(VI) chain precursor|
          Length = 3137

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +2

Query: 14   NARKGRGGQS*EERVSSHGFVG--GRRGEHVPRDPAGGPG-AAERAHRG 151
            + R G GG   + R    GFVG  G +G    R  AGGPG    R  RG
Sbjct: 2301 DGRDGIGGPGPKGRKGERGFVGYPGPKGGPGDRGGAGGPGPKGNRGRRG 2349



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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           ++P YL G   GDYG+D  GL    E
Sbjct: 27  ESPSYLTGEFPGDYGWDTAGLSADPE 52



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>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +3

Query: 210 TDRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 317
           +DR L+      + P YL G   GDYG+D  GL    E
Sbjct: 53  SDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 90



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>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (PNUTS
           protein) (MHC class I region proline-rich protein CAT53)
          Length = 872

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +2

Query: 11  PNARKGRGGQS*EERVSSHGFVGGRRGEHVPRD-PAGGPGAAERAHRG 151
           PN R G GG          G VGG  G H P + P G  G+  R+H G
Sbjct: 734 PNGRGGPGGG---------GMVGG--GGHRPHEGPGGSMGSGHRSHEG 770



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>DHGY_HYPME (P36234) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent|
           hydroxypyruvate reductase) (HPR) (GDH) (Hydroxypyruvate
           dehydrogenase) (Glyoxylate reductase)
          Length = 321

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
 Frame = +3

Query: 207 TTDRPLWFPGAQAPEYLDGTLVGDYGFDPFG--LGKPAEYLQYDVDSLD 347
           T   P W P     E LD   +G YGF   G  L K A+    D+D  D
Sbjct: 129 TRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFD 177



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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           + P YL G   GDYG+D  GL    E
Sbjct: 60  EPPSYLTGEFPGDYGWDTAGLSADPE 85



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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           + P YL G   GDYG+D  GL    E
Sbjct: 64  EPPSYLTGEFPGDYGWDTAGLSADPE 89



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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           + P YL G   GDYG+D  GL    E
Sbjct: 61  EPPSYLTGEFPGDYGWDTAGLSADPE 86



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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           + P YL G   GDYG+D  GL    E
Sbjct: 73  EPPSYLTGEFPGDYGWDTAGLSADPE 98



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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           + P YL G   GDYG+D  GL    E
Sbjct: 64  EPPSYLTGEFPGDYGWDTAGLSADPE 89



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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           + P YL G   GDYG+D  GL    E
Sbjct: 64  EPPSYLTGEFPGDYGWDTAGLSADPE 89



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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           + P YL G   GDYG+D  GL    E
Sbjct: 5   EPPSYLTGEFPGDYGWDTAGLSADPE 30



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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           + P YL G   GDYG+D  GL    E
Sbjct: 64  EPPSYLTGEFPGDYGWDTAGLSADPE 89



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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           + P YL G   GDYG+D  GL    E
Sbjct: 54  EPPSYLTGEFPGDYGWDTAGLSADPE 79



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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           + P YL G   GDYG+D  GL    E
Sbjct: 62  EPPSYLTGEFPGDYGWDTAGLSADPE 87



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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           + P YL G   GDYG+D  GL    E
Sbjct: 44  EPPSYLTGEFPGDYGWDTAGLSADPE 69



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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           +AP YL G    DYG+D  GL    E
Sbjct: 66  EAPSYLTGEFPSDYGWDTAGLSADPE 91



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>GATA5_ARATH (Q8VZP4) GATA transcription factor 5 (AtGATA-5)|
          Length = 308

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +3

Query: 225 WFPGAQAPEYLDGTLVGDYGFDPFGLGKPAEYLQYDVDS 341
           W P A+A E+L G L GD+ FD  GL    +    D+DS
Sbjct: 3   WLPEAEAEEHLKGILSGDF-FD--GLTNHLDCPLEDIDS 38



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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +3

Query: 246 PEYLDGTLVGDYGFDPFGLGKPAE 317
           P YL G   GDYG+D  GL    E
Sbjct: 54  PAYLTGEFPGDYGWDTAGLSADPE 77



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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +3

Query: 246 PEYLDGTLVGDYGFDPFGLGKPAE 317
           P YL G   GDYG+D  GL    E
Sbjct: 65  PSYLTGEFPGDYGWDTEGLSADPE 88



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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 QAPEYLDGTLVGDYGFDPFGLGKPAE 317
           +AP YL G   GDYG+D   L    E
Sbjct: 66  EAPSYLTGEFPGDYGWDTAELSADPE 91



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>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:|
           Chondrocalcin]
          Length = 1459

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +2

Query: 26  GRGGQS*EERVSSHGFVG--GRRGEHVPRDPAGGPG-AAERAHRGA 154
           G  GQ+ E  ++  GF G  G +GE  P  P G PG A E   RGA
Sbjct: 422 GPKGQAGEPGIA--GFKGDQGPKGETGPAGPQGAPGPAGEEGKRGA 465



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>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
           (Protein FB19)
          Length = 925

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
 Frame = +2

Query: 11  PNARKGRGGQS*EERVSSHGFVGGRRGEHVPRD-PAGGPGAAERAHRG 151
           P+   G G  S        G  GG  G H P + P GG G   R H G
Sbjct: 756 PHEGPGGGMSSGSGHRPHEGPGGGMGGGHRPHEGPGGGMGGGHRPHEG 803



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>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:|
           Chondrocalcin]
          Length = 1419

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +2

Query: 26  GRGGQS*EERVSSHGFVGGRRGEHVPRDPAGGPG-AAERAHRGA 154
           G  GQ+ E  ++      G +GE  P  P G PG A E   RGA
Sbjct: 382 GPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEEGKRGA 425


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,561,111
Number of Sequences: 219361
Number of extensions: 574019
Number of successful extensions: 1851
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 1600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1844
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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