ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet71f07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1INVA_PHAAU (P29001) Acid beta-fructofuranosidase precursor (EC 3... 58 2e-08
2INVA_PHAVU (O24509) Acid beta-fructofuranosidase precursor (EC 3... 55 8e-08
3INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I... 55 8e-08
4INVA_VICFA (Q43857) Acid beta-fructofuranosidase precursor (EC 3... 53 4e-07
5INV1_MAIZE (P49175) Beta-fructofuranosidase 1 precursor (EC 3.2.... 52 1e-06
6INVA_LYCES (P29000) Acid beta-fructofuranosidase precursor (EC 3... 51 2e-06
7INV1_CAPAN (P93761) Acid beta-fructofuranosidase AIV-18 (EC 3.2.... 50 3e-06
8GATA2_XENLA (P23770) GATA-binding factor 2 (GATA-2) (Transcripti... 32 0.90
9SMUF1_DROME (Q9V853) E3 ubiquitin-protein ligase Smurf1 (EC 6.3.... 31 2.0
10CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor... 30 2.6
11KAS1_STRRM (P43678) Oxytetracycline polyketide putative beta-ket... 30 2.6
12CAC1D_DROME (Q24270) Voltage-dependent calcium channel type D al... 30 4.4
13TBX1_HUMAN (O43435) T-box transcription factor TBX1 (T-box prote... 28 9.9
14CD45_RAT (P04157) Leukocyte common antigen variant 4 precursor (... 28 9.9

>INVA_PHAAU (P29001) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid|
           sucrose hydrolase) (Acid invertase) (AI) (Vacuolar
           invertase) [Contains: Acid beta-fructofuranosidase 30
           kDa subunit; Acid beta-fructofuranosidase 38 kDa
           subunit]
          Length = 649

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 6/56 (10%)
 Frame = +1

Query: 310 AIPATE-FPRSRGKEHGVSEKTS-----GAYSANGGFPWSNAMLQWQRTGFHFQPD 459
           ++P+++ +P SRG   GVSEK+S     G   A+  FPW N+ML WQRT FHFQP+
Sbjct: 69  SLPSSKWYPVSRGVSSGVSEKSSNLLFAGEGGASEAFPWDNSMLSWQRTSFHFQPE 124



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>INVA_PHAVU (O24509) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid|
           sucrose hydrolase) (Acid invertase) (AI) (Vacuolar
           invertase)
          Length = 651

 Score = 55.5 bits (132), Expect = 8e-08
 Identities = 27/46 (58%), Positives = 31/46 (67%), Gaps = 5/46 (10%)
 Frame = +1

Query: 337 SRGKEHGVSEKTSGA-YSANGG----FPWSNAMLQWQRTGFHFQPD 459
           SRG   GVSEK+S   +S  GG    FPW N+ML WQRT FHFQP+
Sbjct: 79  SRGVSSGVSEKSSSMLFSGEGGASEAFPWDNSMLSWQRTSFHFQPE 124



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>INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I precursor (EC|
           3.2.1.26) (Sucrose hydrolase) (Invertase) (Saccharase)
          Length = 661

 Score = 55.5 bits (132), Expect = 8e-08
 Identities = 24/42 (57%), Positives = 28/42 (66%)
 Frame = +1

Query: 331 PRSRGKEHGVSEKTSGAYSANGGFPWSNAMLQWQRTGFHFQP 456
           P SRG   GVSEK+    +A   +PW+N ML WQRT FHFQP
Sbjct: 97  PPSRGVSQGVSEKSFRQATAEPSYPWTNDMLSWQRTSFHFQP 138



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>INVA_VICFA (Q43857) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid|
           sucrose hydrolase) (Acid invertase) (AI) (Vacuolar
           invertase)
          Length = 642

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 27/47 (57%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
 Frame = +1

Query: 337 SRGKEHGVSEKT-----SGAYSANGG-FPWSNAMLQWQRTGFHFQPD 459
           SRG   GVSEK+     SG     GG FPW+N ML WQRT FHFQP+
Sbjct: 70  SRGVSSGVSEKSNTFLLSGNLVGEGGSFPWNNTMLSWQRTAFHFQPE 116



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>INV1_MAIZE (P49175) Beta-fructofuranosidase 1 precursor (EC 3.2.1.26) (Sucrose|
           1) (Invertase 1)
          Length = 670

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
 Frame = +1

Query: 325 EFPRSRGKEHGVSEKTSGAYSANGG---FPWSNAMLQWQRTGFHFQP 456
           E   SRG   GVSEK++     +G    F W+NAML WQRT FHFQP
Sbjct: 86  EVAASRGVAEGVSEKSTAPLLGSGALQDFSWTNAMLAWQRTAFHFQP 132



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>INVA_LYCES (P29000) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid|
           sucrose hydrolase) (Acid invertase) (AI) (Vacuolar
           invertase)
          Length = 636

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
 Frame = +1

Query: 331 PRSRGKEHGVSEKT--SGAYSANGGFPWSNAMLQWQRTGFHFQP 456
           P SRG   GVS+KT    A +++  + WSNAML WQRT +HFQP
Sbjct: 68  PPSRGVSQGVSDKTFRDVAGASHVSYAWSNAMLSWQRTAYHFQP 111



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>INV1_CAPAN (P93761) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid|
           sucrose hydrolase) (Acid invertase)
          Length = 640

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 27/49 (55%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = +1

Query: 316 PATEFPRSRGKEHGVSEKTSGAYSANG--GFPWSNAMLQWQRTGFHFQP 456
           PAT    SRG   GVSEKT    S      + WSNAML WQRT +HFQP
Sbjct: 74  PATP---SRGVSQGVSEKTFKDVSGTSQVSYTWSNAMLNWQRTAYHFQP 119



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>GATA2_XENLA (P23770) GATA-binding factor 2 (GATA-2) (Transcription factor|
           xGATA-2)
          Length = 452

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +1

Query: 1   IHPSARKQSTHPPRDHRACTGGAMDSSRVILIPGTPPLPYAYEQLPSSSADANGQEEQ 174
           +HP+AR  S +P     AC   +  S  +   P TPP   + +  P+S   ++  E++
Sbjct: 124 LHPAARGGSLYPGTGSSACPSSSHSSPHLFGFPPTPPKDVSPDPGPASPPSSSRLEDK 181



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>SMUF1_DROME (Q9V853) E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Smad|
           ubiquitination regulatory factor 1 homolog) (DSmurf)
           (Lethal with a checkpoint kinase protein)
          Length = 1061

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 374 RGPTPPTAASRGATPCCSGSAPASISSRTVLPDDPT 481
           RG  PPT+A+   TP    + PA+ S+   +P   T
Sbjct: 604 RGTVPPTSAANAGTPAPPSATPATPSAAAAVPPQAT 639



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>CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor 3 precursor|
            (Flamingo homolog 1) (hFmi1) (Multiple epidermal growth
            factor-like domains 2) (Epidermal growth factor-like 1)
          Length = 3312

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +1

Query: 4    HPSARKQSTHPPRDHRACTGG--AMDSSRVILIPGTPPLPYAYEQLPSSSADAN 159
            HPS+ + +   PR H     G  A D    +L+P   P P   E LP+SS+  N
Sbjct: 2333 HPSSPRGARRYPRYHSNLFRGQDAWDPHTHVLLPSQSPRPSPSEVLPTSSSIEN 2386



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>KAS1_STRRM (P43678) Oxytetracycline polyketide putative beta-ketoacyl synthase|
           1
          Length = 425

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -3

Query: 474 SSGSTVRLEMEAGALPLQHGVAPREAAVGGVGPRCLLRHAVLLA 343
           S G+   LE+ A AL ++HGV P  A +    P C L +  L+A
Sbjct: 351 SLGAICALEVAASALRIEHGVIPPTANLREPDPDCDLDYVPLVA 394



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>CAC1D_DROME (Q24270) Voltage-dependent calcium channel type D alpha-1 subunit|
            (DmCa1D)
          Length = 2516

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = +1

Query: 31   HPPRDHRACTGGAMDSSRVILIPGTPPLPYAYEQLPSSSADANGQEEQRAGGGL 192
            HP  +  A  G      R  +I  TP  PY   +LP+SS D NG  E   GG L
Sbjct: 2290 HPYNNVYAPNGALPGHER--MIQSTPASPYDQRRLPTSS-DMNGLAESLIGGVL 2340



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>TBX1_HUMAN (O43435) T-box transcription factor TBX1 (T-box protein 1)|
           (Testis-specific T-box protein)
          Length = 398

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 16/60 (26%), Positives = 24/60 (40%)
 Frame = +1

Query: 7   PSARKQSTHPPRDHRACTGGAMDSSRVILIPGTPPLPYAYEQLPSSSADANGQEEQRAGG 186
           P   ++   PP  +  C   A  +      PG PP P+AY   P++ A  +   E    G
Sbjct: 37  PYGPREPPPPPPRYDPCAAAAPGA------PGPPPPPHAYPFAPAAGAATSAAAEPEGPG 90



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>CD45_RAT (P04157) Leukocyte common antigen variant 4 precursor (EC 3.1.3.48)|
           (L-CA) (CD45 antigen) (T200) (Fragment)
          Length = 1255

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +1

Query: 58  TGGAMDSSRVILIPGTPPLPYAYEQL--PSSSADANGQEE 171
           T   +D++ ++L+P T PLP    +   PS S   NG  E
Sbjct: 9   TDDGLDTTEIVLLPQTDPLPARTTEFTPPSISERGNGSSE 48


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.131    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,339,415
Number of Sequences: 219361
Number of extensions: 1056335
Number of successful extensions: 3140
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3133
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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