ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet71f07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ567377.2|HVU567377 Hordeum vulgare partial mRNA for sucrose-sucrose-1-fructosyltransferase (1-sst gene) Length = 2157 Score = 575 bits (290), Expect = e-161 Identities = 333/342 (97%), Gaps = 4/342 (1%) Strand = Plus / Plus Query: 140 cctcctccgccgacgccaatggccaggaggagcagcgggccggcggtggcctgaggtggc 199 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1 cctcctccgccgacgccaatggccaggaggagcagcgggccggcg-tggcctgaggtggc 59 Query: 200 gcgtgtgcgccgccgtgcttgccgcctcggccgtgctggcgctcgtcgtcgccgccgcgg 259 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 60 acgtgtgcgccgccgtgcttgtcgcctcggccgtgctggcgctcgtcgtcgccgccgcgg 119 Query: 260 tcttcggggccggtgtggcgggccgtgacgtggtggccggctccgtgccggccattccgg 319 |||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 120 tcttcggg-ccggtgtggcgggccgtgacgcggtggccggctccgtgccgtccattccgg 178 Query: 320 caacggagttcccgaggagcaggggcaaggagcacggcgtgtcggagaagacatcggggg 379 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 cgacggagttcccgaggagcaggggcaaggagcacggcgtgtcggagaagacatcggggg 238 Query: 380 cctactccgccaacggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 cctactccgccaacggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccg 298 Query: 440 gcttccatttccagccggac-agtactaccag-acgatccca 479 |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 299 gcttccatttccagccggacaagtactaccagaacgatccca 340
>dbj|AB029888.1| Triticum aestivum 1-SST mRNA for sucrose:sucrose 1-fructosytransferase, complete cds Length = 2330 Score = 571 bits (288), Expect = e-160 Identities = 413/449 (91%), Gaps = 8/449 (1%) Strand = Plus / Plus Query: 36 acctcgggatcatcgggcctgcaccggcggcgccatggattcctctcgcgtcattctcat 95 ||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||| Sbjct: 22 acctcgggatcatcgggccagcagcggcggcgccatggattcgtctcgcgtcatactcat 81 Query: 96 ccccggcacgccgccgctgccctacgcctacgagcagctgccctcctcctccgccgacgc 155 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 82 ccccggcacgccgccgctgccgtacgcctacgagcagctgccgtcctcctccgcggacgc 141 Query: 156 caatggccaggaggagcagcgggccggcgg---tggcctgaggtggcgcgtgtgcgccgc 212 ||| ||| |||||| ||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 142 caagggcatcgaggaggagcgggccggcggcggtggcctgaggtggcgcgcgtgcgccgc 201 Query: 213 cgtgcttgccgcctcggccgtgctggcgctcgtcgtcgccgccgcggtcttcggggccgg 272 |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 202 cgtgctggccgcctcggccgtggtggcgctcgtcgtcgccgccgcggtcttcggggccag 261 Query: 273 tgtggcgggccgtgacgtggtggccggctccgtgccggccattccggcaacggagttccc 332 | ||||||| | |||| |||||||| |||||||||||| | ||||| ||||||||||| Sbjct: 262 cggggcgggctgggacgcggtggccgcctccgtgccggcgaccccggcgacggagttccc 321 Query: 333 gaggagcaggggcaaggagcacggcgtgtcggagaagacatcgggggcctactccgccaa 392 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 322 gaggagcaggggcaaggagcacggcgtgtcggagaagacgtcgggggcctactccgccaa 381 Query: 393 cggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttcca 452 | ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 382 c-gcg--ttcccgtggagcaacgccatgctgcagtggcagcgcaccggctaccatttcca 438 Query: 453 gccggac-agtactaccag-acgatccca 479 ||||||| ||||||||||| ||||||||| Sbjct: 439 gccggacaagtactaccagaacgatccca 467
>dbj|AB159786.1| Triticum aestivum 1-SST gene for sucrose:sucrose 1-fructosyltransferase, complete cds Length = 3326 Score = 517 bits (261), Expect = e-143 Identities = 373/406 (91%), Gaps = 7/406 (1%) Strand = Plus / Plus Query: 70 atggattcctctcgcgtcattctcatccccggcacgccgccgctgccctacgcctacgag 129 |||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 1 atggattcgtctcgcgtcatactcatccccggcacgccgccgctgccgtacgcctacgag 60 Query: 130 cagctgccctcctcctccgccgacgccaatggccaggaggagcagcgggccggcgg---t 186 |||||||| ||||||||||| |||||||| ||| |||||| ||||||||||||| | Sbjct: 61 cagctgccgtcctcctccgcggacgccaagggcatcgaggaggagcgggccggcggcggt 120 Query: 187 ggcctgaggtggcgcgtgtgcgccgccgtgcttgccgcctcggccgtgctggcgctcgtc 246 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 121 ggcctgaggtggcgcgcgtgcgccgccgtgctggccgcctcggccgtggtggcgctcgtc 180 Query: 247 gtcgccgccgcggtcttcggggccggtgtggcgggccgtgacgtggtggccggctccgtg 306 |||||||||||||||||||||||| | | ||||||| | |||| |||||||| ||||||| Sbjct: 181 gtcgccgccgcggtcttcggggccagcggggcgggctgggacgcggtggccgcctccgtg 240 Query: 307 ccggccattccggcaacggagttcccgaggagcaggggcaaggagcacggcgtgtcggag 366 ||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ccggcgaccccggcgacggagttcccgaggagcaggggcaaggagcacggcgtgtcggag 300 Query: 367 aagacatcgggggcctactccgccaacggcggcttcccgtggagcaacgccatgctgcag 426 ||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 301 aagacgtcgggggcctactccgccaac-gcg--ttcccgtggagcaacgccatgctgcag 357 Query: 427 tggcagcgcaccggcttccatttccagccggac-agtactaccaga 471 |||||||||||||||| |||||||||||||||| |||||||||||| Sbjct: 358 tggcagcgcaccggctaccatttccagccggacaagtactaccaga 403
>dbj|AB088409.1| Triticum aestivum 1-FFT-A mRNA for fructan:fructan 1-fructosyltransferase, complete cds Length = 2304 Score = 190 bits (96), Expect = 3e-45 Identities = 182/212 (85%), Gaps = 9/212 (4%) Strand = Plus / Plus Query: 59 ccggcggcgccatggattcctctcgcgtcattctcatccccggcacgccgccgctgccct 118 |||||||||||||||| || || |||| ||| |||||||||||||||||||||||||||| Sbjct: 74 ccggcggcgccatggagtcgtcacgcggcatcctcatccccggcacgccgccgctgccct 133 Query: 119 acgcctacgagcagctgccctcctcctccgccgacgccaatggccaggaggagcagcggg 178 |||| ||||||| ||||||||||||||||||||||||||| ||||||||||| | |||| Sbjct: 134 acgcgtacgagccgctgccctcctcctccgccgacgccaacggccaggaggaccggcgga 193 Query: 179 ccggcggtggcctgaggtggcgcgtgtgcgccgccgtgcttgccgcctcggccgtgctgg 238 | ||| ||| |||||||||||| ||| ||||||||||| ||||||| || Sbjct: 194 tcaccggcggcgtgaggtggcgcgcgtgggccgccgtgct---------ggccgtggggg 244 Query: 239 cgctcgtcgtcgccgccgcggtcttcggggcc 270 ||||||||||||||||||||||||| |||||| Sbjct: 245 cgctcgtcgtcgccgccgcggtctttggggcc 276 Score = 137 bits (69), Expect = 4e-29 Identities = 75/77 (97%) Strand = Plus / Plus Query: 382 tactccgccaacggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggc 441 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 tactccgccagcggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggc 417 Query: 442 ttccatttccagccgga 458 | ||||||||||||||| Sbjct: 418 taccatttccagccgga 434
>emb|AJ297369.1|FAR297369 Festuca arundinacea mRNA for sucrose:sucrose 1-fructosyltransferase (1-SST gene) Length = 2045 Score = 190 bits (96), Expect = 3e-45 Identities = 123/132 (93%) Strand = Plus / Plus Query: 324 ggagttcccgaggagcaggggcaaggagcacggcgtgtcggagaagacatcgggggccta 383 |||| |||||||||||||||||||||| |||||||||||||||| | ||||||||||| Sbjct: 255 ggagatcccgaggagcaggggcaaggacttcggcgtgtcggagaaggcgtcgggggccta 314 Query: 384 ctccgccaacggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggctt 443 ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 315 ctccgccgacggcgggttcccgtggagcaacgccatgctgcagtggcagcgcaccgggtt 374 Query: 444 ccatttccagcc 455 |||||||||||| Sbjct: 375 ccatttccagcc 386 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 182 gcggtggcctgaggtggcgcgtgtgcgccgccgtgcttgccgcctcggc 230 |||| ||| ||||||||||||||||||| |||||| | ||||||||||| Sbjct: 104 gcggcggcgtgaggtggcgcgtgtgcgctgccgtgttggccgcctcggc 152
>gb|AY245431.1| Lolium perenne sucrose:sucrose 1-fructosyltransferase mRNA, complete cds Length = 1962 Score = 172 bits (87), Expect = 7e-40 Identities = 123/135 (91%) Strand = Plus / Plus Query: 324 ggagttcccgaggagcaggggcaaggagcacggcgtgtcggagaagacatcgggggccta 383 |||||||||||||||| |||||||||| |||||||||||||||| | || || ||||| Sbjct: 252 ggagttcccgaggagccggggcaaggacttcggcgtgtcggagaagtcctccggtgccta 311 Query: 384 ctccgccaacggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggctt 443 |||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 312 ctccaccgacggcgggttcccgtggagcaacgccatgctgcagtggcagcgcaccgggtt 371 Query: 444 ccatttccagccgga 458 ||||||||||||||| Sbjct: 372 ccatttccagccgga 386 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 192 gaggtggcgcgtgtgcgccgccgtgcttgccgcctcggc 230 ||||||||||| ||||||||||||||| ||||| ||||| Sbjct: 111 gaggtggcgcgcgtgcgccgccgtgctggccgcatcggc 149
>dbj|AB088410.1| Triticum aestivum 1-FFT-B mRNA for fructan:fructan 1-fructosyltransferase, complete cds Length = 2251 Score = 167 bits (84), Expect = 4e-38 Identities = 176/208 (84%), Gaps = 9/208 (4%) Strand = Plus / Plus Query: 63 cggcgccatggattcctctcgcgtcattctcatccccggcacgccgccgctgccctacgc 122 |||||||||||| ||||| |||| ||| |||||||||||||||||||||||||||||||| Sbjct: 51 cggcgccatggagtcctcacgcggcatcctcatccccggcacgccgccgctgccctacgc 110 Query: 123 ctacgagcagctgccctcctcctccgccgacgccaatggccaggaggagcagcgggccgg 182 ||||||| ||||||||||||||| ||||||||||| ||||||||||| | ||| || | Sbjct: 111 gtacgagccgctgccctcctcctctgccgacgccaacggccaggaggaccggcgaaccag 170 Query: 183 cggtggcctgaggtggcgcgtgtgcgccgccgtgcttgccgcctcggccgtgctggcgct 242 ||| ||| | ||||||||| ||| ||| ||||||| ||||||| ||||||| Sbjct: 171 cggcggcgtcaggtggcgctcgtgggccaccgtgct---------ggccgtggtggcgct 221 Query: 243 cgtcgtcgccgccgcggtcttcggggcc 270 |||||||| |||||||||||| |||||| Sbjct: 222 cgtcgtcgtcgccgcggtctttggggcc 249 Score = 109 bits (55), Expect = 9e-21 Identities = 64/67 (95%) Strand = Plus / Plus Query: 392 acggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttcc 451 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 329 acggcggcttcccgtggagcaacgccatgctggggtggcagcgcaccggctaccatttcc 388 Query: 452 agccgga 458 ||||||| Sbjct: 389 agccgga 395
>dbj|AB125218.1| Lolium perenne mRNA for putative fructosyltransferase2, complete cds Length = 2462 Score = 115 bits (58), Expect = 1e-22 Identities = 67/70 (95%) Strand = Plus / Plus Query: 386 ccgccaacggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttcc 445 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 319 ccgccgacggcggcttcccgtggagcaacgccatgctgcagtggcagcacaccgggttcc 378 Query: 446 atttccagcc 455 |||||||||| Sbjct: 379 atttccagcc 388 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 337 agcaggggcaaggagcacggcgtgtcggagaag 369 |||||||||||||| |||||||||||||||| Sbjct: 279 agcaggggcaaggattccggcgtgtcggagaag 311
>gb|AY575717.1| Triticum monococcum vacuolar invertase1 (vin1) mRNA, complete cds Length = 2414 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 450 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 191 tgaggtggcgcgtgtgcgccgccgtgcttgccgcctcggccgtgctggcgctcgtcgt 248 |||||||||||| ||||| ||||||||| ||||| ||||||||| ||| ||| ||||| Sbjct: 153 tgaggtggcgcgcgtgcgtcgccgtgctggccgcgtcggccgtggtggtgctggtcgt 210
>gb|AF492836.1| Lolium perenne putative sucrose:sucrose 1-fructosyltransferase mRNA, complete cds Length = 2508 Score = 109 bits (55), Expect = 9e-21 Identities = 64/67 (95%) Strand = Plus / Plus Query: 386 ccgccaacggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttcc 445 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 334 ccgccgacggcggcttcccgtggagcaacgccatgctgcagtggcagcacaccgggttcc 393 Query: 446 atttcca 452 ||||||| Sbjct: 394 atttcca 400 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 337 agcaggggcaaggagcacggcgtgtcggagaag 369 |||||||||||||| |||||||||||||||| Sbjct: 294 agcaggggcaaggattccggcgtgtcggagaag 326
>gb|AF481763.1| Lolium perenne fructosyltransferase (FT1) mRNA, complete cds Length = 2386 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 455 |||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 381 ttcccgtggagcaacgccatgctgcagtggcagcgcacgggtttccatttccagcc 436 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 118 tacgcctacgagcagctgccctcctcctccgccgacgccaatggccaggaggagcagcgg 177 ||||| ||||||| ||||||| |||||||| ||||||| ||||||| || || | ||| Sbjct: 72 tacgcgtacgagccgctgccccactcctccgacgacgcccatggccacgacgaccgccgg 131 Query: 178 gccggcggtggcctgaggtggcgcgtgtgcgccgccgtgcttgc 221 || ||| ||| |||||||||||| |||||| ||||| ||||| Sbjct: 132 agcgccggcggcgtgaggtggcgcgcgtgcgcggccgttcttgc 175
>emb|AJ532552.1|LTE532552 Lolium temulentum partial inv1:2 gene for putative soluble acid invertase, exons 1-3 Length = 1381 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 455 |||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 357 ttcccgtggagcaacgccatgctgcagtggcagcgcacgggtttccatttccagcc 412 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 191 tgaggtggcgcgtgtgcgccgccgtgcttgccgcctcggcc 231 |||||||||||| |||||| ||||| ||||| || |||||| Sbjct: 121 tgaggtggcgcgcgtgcgcggccgttcttgcggcgtcggcc 161
>emb|AJ563423.1|ZMA563423 Zea mays partial ivr2b pseudogene Length = 7411 Score = 89.7 bits (45), Expect = 8e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagccg 456 |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 4949 ttcccgtggagcaatgccatgctgcagtggcagcgcacgggcttccacttccagccg 5005
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 455 ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| Sbjct: 343496 ttcccgtggagcaacgcgatgctgcaatggcagcgcaccggattccatttccagcc 343551 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 354 cggcgtgtcggagaagacatcgggggc 380 |||||||||||||||||| |||||||| Sbjct: 343423 cggcgtgtcggagaagacgtcgggggc 343449 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 ggccgtgctggcgctcgtcgtcgccgccg 256 ||||||||||||||||| |||||| |||| Sbjct: 16740622 ggccgtgctggcgctcggcgtcgcggccg 16740594
>gb|AF276704.1|AF276704 Oryza sativa vacuolar acid invertase (INV3) gene, complete cds Length = 3725 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 455 ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| Sbjct: 555 ttcccgtggagcaacgcgatgctgcaatggcagcgcaccggattccatttccagcc 610 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 354 cggcgtgtcggagaagacatcgggggc 380 |||||||||||||||||| |||||||| Sbjct: 482 cggcgtgtcggagaagacgtcgggggc 508
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 455 ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| Sbjct: 72280 ttcccgtggagcaacgcgatgctgcaatggcagcgcaccggattccatttccagcc 72335 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 354 cggcgtgtcggagaagacatcgggggc 380 |||||||||||||||||| |||||||| Sbjct: 72207 cggcgtgtcggagaagacgtcgggggc 72233
>dbj|AK072245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002K22, full insert sequence Length = 2443 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 455 ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| Sbjct: 441 ttcccgtggagcaacgcgatgctgcaatggcagcgcaccggattccatttccagcc 496 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 354 cggcgtgtcggagaagacatcgggggc 380 |||||||||||||||||| |||||||| Sbjct: 368 cggcgtgtcggagaagacgtcgggggc 394
>gb|AY082350.1| Lolium perenne fructosyltransferase (FT2) mRNA, complete cds Length = 2337 Score = 79.8 bits (40), Expect = 8e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 455 |||||||||||||| || ||||| ||||||||||||||||||||||| |||||||| Sbjct: 432 ttcccgtggagcaatgcgatgctccagtggcagcgcaccggcttccacttccagcc 487
>emb|AJ532551.1|LTE532551 Lolium temulentum partial mRNA for putative soluble acid invertase (inv1:2 gene) Length = 1998 Score = 79.8 bits (40), Expect = 8e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 408 gagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 455 |||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 1 gagcaacgccatgctgcagtggcagcgcacgggtttccatttccagcc 48
>gb|AF192394.1|AF192394 Poa secunda sucrose:fructan 6-fructosyltransferase (6-SFT) mRNA, complete cds Length = 2057 Score = 79.8 bits (40), Expect = 8e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 399 cttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagccgga 458 |||||||||||||||| ||||||||||||||||||| |||| |||||||||||| |||| Sbjct: 258 cttcccgtggagcaactccatgctgcagtggcagcgggccgggttccatttccagacgga 317
>gb|DQ073970.1| Lolium perenne fructosyltransferase-like protein mRNA, complete cds Length = 1962 Score = 79.8 bits (40), Expect = 8e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 455 |||||||||| || ||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 352 ttcccgtggaccagcgcgatgctgcagtggcagcgcaccgggttccatttccagcc 407
>gb|AF494041.1| Lolium perenne fructan 6-fructosyltransferase mRNA, complete cds Length = 2279 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagccgga 458 |||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||||| Sbjct: 315 ttcccgtggagcaacgagatgctgcagtggcagcgcgccgggttccattaccagccgga 373
>emb|AJ532550.1|LTE532550 Lolium temulentum mRNA for putative fructan 6-fructosyltransferase (6ft gene) Length = 2331 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagccgga 458 |||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||||| Sbjct: 318 ttcccgtggagcaacgagatgctgcagtggcagcgcgccgggttccattaccagccgga 376
>dbj|AB186920.1| Lolium perenne mRNA for putative fructosyltransferase1, complete cds Length = 2268 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagccgga 458 |||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||||| Sbjct: 309 ttcccgtggagcaacgagatgctgcagtggcagcgcgccgggttccattaccagccgga 367
>gb|AY302083.1| Saccharum hybrid cultivar soluble acid invertase (ShinvA) mRNA, partial cds Length = 2274 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagccg 456 |||||||||||||| || |||||||||||||||||||| || ||||| ||||||||| Sbjct: 241 ttcccgtggagcaatgcgatgctgcagtggcagcgcacgggattccacttccagccg 297
>gb|AF062735.1|AF062735 Saccharum officinarum soluble acid invertase mRNA, partial cds Length = 1808 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagccg 456 |||||||||||||| || |||||||||||||||||||| || ||||| ||||||||| Sbjct: 22 ttcccgtggagcaatgcgatgctgcagtggcagcgcacgggattccacttccagccg 78
>gb|AF062734.1|AF062734 Saccharum robustum soluble acid invertase mRNA, partial cds Length = 1808 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagccg 456 |||||||||||||| || |||||||||||||||||||| || ||||| ||||||||| Sbjct: 22 ttcccgtggagcaatgcgatgctgcagtggcagcgcacgggattccacttccagccg 78
>emb|AJ635225.1| Triticum aestivum mRNA for acid beta-fructofuranosidase precursor (inv1 gene) Length = 2250 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 455 |||||||||||||| |||||||| |||||||||||||| ||||| || |||||||| Sbjct: 396 ttcccgtggagcaatgccatgctccagtggcagcgcacaggctttcacttccagcc 451
>emb|AJ623275.1| Hordeum vulgare mRNA for soluble acid invertase (sai gene) Length = 2038 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 455 |||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| Sbjct: 380 ttcccgtggagcaatgccatgctccagtggcagcgcacggggttccacttccagcc 435
>emb|AJ532549.1|LTE532549 Lolium temulentum mRNA for putative soluble acid invertase (inv1:4 gene) Length = 2407 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 455 |||||||||||||| || ||||| |||||||| |||||||||||||| |||||||| Sbjct: 500 ttcccgtggagcaatgcgatgctccagtggcaacgcaccggcttccacttccagcc 555
>dbj|AB029887.1| Triticum aestivum 6-SFT mRNA for sucrose:fructan 6-fructosyltransferase, complete cds Length = 2220 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 394 ggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccag 453 ||||| |||||||||||||||| ||||||||||||||||||| |||| |||||||||| Sbjct: 243 ggcgggttcccgtggagcaacgagatgctgcagtggcagcgcagtggctaccatttccag 302 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gaggtggcgcgtgtgcgccg 211 |||||||||||||||||||| Sbjct: 128 gaggtggcgcgtgtgcgccg 147
>emb|X83233.1|HVSF6FT Hordeum vulgare mRNA for sucrose:fructan 6-fructosyltransferase Length = 2091 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 394 ggcggcttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccag 453 ||||| |||||||||||||||| ||||||||||||||||||| ||| | |||||||||| Sbjct: 250 ggcgggttcccgtggagcaacgagatgctgcagtggcagcgcagcggttaccatttccag 309
>gb|DQ267825.1| Dendrocalamopsis oldhamii vacuolar invertase BObetaFRUCT3 mRNA, complete cds Length = 2155 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 400 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggcttccatttccagcc 455 |||||||||||||| || |||||||| ||||||||||| || |||||||||||||| Sbjct: 328 ttcccgtggagcaatgcgatgctgcaatggcagcgcacggggttccatttccagcc 383
>gb|AF211253.1| Agropyron cristatum sucrose:fructan 6-fructosyltransferase (6-SFT) mRNA, complete cds Length = 2174 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 394 ggcggcttcccgtggagcaacgccatgctgcagtggcagcg 434 ||||| |||||||||||||||| ||||||||||||||||| Sbjct: 284 ggcgggttcccgtggagcaacgagatgctgcagtggcagcg 324 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 197 ggcgcgtgtgcgccgccgtgcttgccgcctcggccgtgctggcgctcgtcgtcgccgccg 256 |||||||||||||||| ||||| | ||||||||| || ||| | | ||||||||||||| Sbjct: 174 ggcgcgtgtgcgccgctatgcttacggcctcggccatggtggtggtggtcgtcgccgccg 233 Query: 257 cg 258 || Sbjct: 234 cg 235
>emb|X97643.1|TGINV6GEN T.gesneriana mRNA for invertase 6 Length = 2079 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 415 gccatgctgcagtggcagcgcaccggcttccatttccagccgga 458 |||||||||||||||||| | || || ||||||||||||||||| Sbjct: 256 gccatgctgcagtggcagaggactgggttccatttccagccgga 299
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 242 tcgtcgtcgccgccgcggtcttcg 265 |||||||||||||||||||||||| Sbjct: 1333587 tcgtcgtcgccgccgcggtcttcg 1333610 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 gctggcgctcgtcgtcgccgcc 255 |||||||||||||||||||||| Sbjct: 446189 gctggcgctcgtcgtcgccgcc 446168 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 240 gctcgtcgtcgccgccgcggtcttc 264 |||||||||||| |||||||||||| Sbjct: 11365 gctcgtcgtcgcggccgcggtcttc 11341
>emb|X95651.1|TGINV11GN T.gesneriana mRNA for invertase Length = 2066 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 415 gccatgctgcagtggcagcgcaccggcttccatttccagccgga 458 ||||||||| |||||||| | || || ||||||||||||||||| Sbjct: 282 gccatgctggagtggcagaggactgggttccatttccagccgga 325
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 238 gcgctcgtcgtcgccgccgcggtcttc 264 |||||||||||| |||||||||||||| Sbjct: 144681 gcgctcgtcgtcaccgccgcggtcttc 144655
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 238 gcgctcgtcgtcgccgccgcggtcttc 264 |||||||||||| |||||||||||||| Sbjct: 1540273 gcgctcgtcgtcaccgccgcggtcttc 1540247
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 275 tggcgggccgtgacgtggtggc 296 |||||||||||||||||||||| Sbjct: 783079 tggcgggccgtgacgtggtggc 783100
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 275 tggcgggccgtgacgtggtggc 296 |||||||||||||||||||||| Sbjct: 724342 tggcgggccgtgacgtggtggc 724363
>gb|AC132805.3| Homo sapiens chromosome 16 clone LA16c-356B12, complete sequence Length = 35019 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 cggcggtggcctgaggtggcgc 201 |||||||||||||||||||||| Sbjct: 32438 cggcggtggcctgaggtggcgc 32459
>gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, complete sequence Length = 148054 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 180 cggcggtggcctgaggtggcgc 201 |||||||||||||||||||||| Sbjct: 129348 cggcggtggcctgaggtggcgc 129327
>gb|AC135049.2| Homo sapiens chromosome 16 clone RP11-142N21, complete sequence Length = 115368 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 180 cggcggtggcctgaggtggcgc 201 |||||||||||||||||||||| Sbjct: 105923 cggcggtggcctgaggtggcgc 105902
>ref|XM_465675.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1585 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 ggccgtgctggcgctcgtcgtcgccgccg 256 ||||||||||||||||| |||||| |||| Sbjct: 441 ggccgtgctggcgctcggcgtcgcggccg 469
>gb|AY772006.1| Oryza sativa (japonica cultivar-group) ornithine decarboxylase (ODC1) mRNA, complete cds Length = 1527 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 ggccgtgctggcgctcgtcgtcgccgccg 256 ||||||||||||||||| |||||| |||| Sbjct: 381 ggccgtgctggcgctcggcgtcgcggccg 409
>gb|AC161219.4| Mus musculus chromosome 7, clone RP23-83E16, complete sequence Length = 211735 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 agtactaccagacgatcccac 480 ||||||||||||||||||||| Sbjct: 17013 agtactaccagacgatcccac 17033
>ref|XM_757059.1| Ustilago maydis 521 hypothetical protein (UM06005.1) partial mRNA Length = 9528 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 cctcctcctccgccgacgcca 157 ||||||||||||||||||||| Sbjct: 1852 cctcctcctccgccgacgcca 1872
>gb|AC125154.3| Mus musculus BAC clone RP24-380C2 from chromosome 3, complete sequence Length = 186277 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 agtactaccagacgatcccac 480 ||||||||||||||||||||| Sbjct: 19019 agtactaccagacgatcccac 19039
>gb|AC121796.3| Mus musculus BAC clone RP23-423D22 from chromosome 18, complete sequence Length = 158469 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 agtactaccagacgatcccac 480 ||||||||||||||||||||| Sbjct: 264 agtactaccagacgatcccac 284
>gb|AC117589.13| Mus musculus chromosome 18, clone RP23-222A8, complete sequence Length = 211309 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 460 agtactaccagacgatcccac 480 ||||||||||||||||||||| Sbjct: 57754 agtactaccagacgatcccac 57734
>gb|AC140486.4| Mus musculus BAC clone RP24-134B9 from chromosome 3, complete sequence Length = 166094 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 460 agtactaccagacgatcccac 480 ||||||||||||||||||||| Sbjct: 17680 agtactaccagacgatcccac 17660
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 gccggcggtggcctgaggtggcgcg 202 |||||||||||||||||| |||||| Sbjct: 619049 gccggcggtggcctgaggcggcgcg 619025
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 cccggcacgccgccgctgccc 117 ||||||||||||||||||||| Sbjct: 62374 cccggcacgccgccgctgccc 62394
>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0091C16 Length = 162527 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 ggccgtgctggcgctcgtcgtcgccgccg 256 ||||||||||||||||| |||||| |||| Sbjct: 117677 ggccgtgctggcgctcggcgtcgcggccg 117649
>emb|BX465835.8| Mouse DNA sequence from clone RP23-42K18 on chromosome 4, complete sequence Length = 113482 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 agtactaccagacgatcccac 480 ||||||||||||||||||||| Sbjct: 111745 agtactaccagacgatcccac 111765
>dbj|AK107159.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-E11, full insert sequence Length = 1585 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 ggccgtgctggcgctcgtcgtcgccgccg 256 ||||||||||||||||| |||||| |||| Sbjct: 441 ggccgtgctggcgctcggcgtcgcggccg 469
>gb|AC102304.6| Mus musculus chromosome 7, clone RP24-403P14, complete sequence Length = 153206 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 460 agtactaccagacgatcccac 480 ||||||||||||||||||||| Sbjct: 18715 agtactaccagacgatcccac 18695
>gb|AY105724.1| Zea mays PCO149105 mRNA sequence Length = 1357 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 gcgccgccgtgcttgccgcct 226 ||||||||||||||||||||| Sbjct: 931 gcgccgccgtgcttgccgcct 911
>gb|AC149598.2| Mus musculus BAC clone RP24-119N9 from 18, complete sequence Length = 161955 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 agtactaccagacgatcccac 480 ||||||||||||||||||||| Sbjct: 67941 agtactaccagacgatcccac 67961
>emb|BX004998.7| Mouse DNA sequence from clone RP23-402C17 on chromosome 4, complete sequence Length = 179875 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 460 agtactaccagacgatcccac 480 ||||||||||||||||||||| Sbjct: 179613 agtactaccagacgatcccac 179593
>gb|AF016633.1|AF016633 Glycine max GH1 protein (GH1) mRNA, partial cds Length = 1108 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 cagtggcagcgcaccggcttc 444 ||||||||||||||||||||| Sbjct: 523 cagtggcagcgcaccggcttc 543
>ref|XM_480995.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1584 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 tcgtcgtcgccgccgcggtc 261 |||||||||||||||||||| Sbjct: 49 tcgtcgtcgccgccgcggtc 68
>ref|NM_185070.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1798 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcgctcgtcgtcgccgccgc 257 |||||||||||||||||||| Sbjct: 513 gcgctcgtcgtcgccgccgc 494
>ref|NM_192515.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2439 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 cctcctcctccgccgacgccaatg 160 ||||||||||||||| |||||||| Sbjct: 2098 cctcctcctccgccgccgccaatg 2121
>ref|XM_479391.1| Oryza sativa (japonica cultivar-group), mRNA Length = 900 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 tcgtcgtcgccgccgcggtcttcg 265 ||||||||||||||| |||||||| Sbjct: 635 tcgtcgtcgccgccgtggtcttcg 612
>ref|XM_476668.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1435 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcgctcgtcgtcgccgccgc 257 |||||||||||||||||||| Sbjct: 131 gcgctcgtcgtcgccgccgc 112
>ref|XM_473543.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2421 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cctcctcctccgccgacgcc 156 |||||||||||||||||||| Sbjct: 152 cctcctcctccgccgacgcc 133
>gb|BT018785.1| Zea mays clone EL01N0527F04.d mRNA sequence Length = 1402 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gcgccgccgtgcttgccgcc 225 |||||||||||||||||||| Sbjct: 844 gcgccgccgtgcttgccgcc 825
>gb|AY023466.1| Oryza sativa microsatellite MRG5791 containing (TCG)X9, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 tcgtcgtcgccgccgcggtcttcg 265 ||||||||||||||| |||||||| Sbjct: 161 tcgtcgtcgccgccgtggtcttcg 184
>gb|AY023325.1| Oryza sativa microsatellite MRG5650 containing (GTC)X11, genomic sequence Length = 233 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 tcgtcgtcgccgccgcggtcttcg 265 ||||||||||||||| |||||||| Sbjct: 201 tcgtcgtcgccgccgtggtcttcg 224
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cctcctcctccgccgacgcc 156 |||||||||||||||||||| Sbjct: 9074 cctcctcctccgccgacgcc 9093
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cctcctcctccgccgacgcc 156 |||||||||||||||||||| Sbjct: 109762 cctcctcctccgccgacgcc 109781
>gb|AY644643.1| Oryza sativa (indica cultivar-group) hypothetical protein (RP2) mRNA, complete cds Length = 1343 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 tcgtcgtcgccgccgcggtcttcg 265 ||||||||||||||| |||||||| Sbjct: 663 tcgtcgtcgccgccgtggtcttcg 640
>gb|AY658960.1| Synthetic construct Peudomonas aeruginosa clone FLH042563.01F PA2115 gene, partial cds Length = 954 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 ggcttccatttccagccgga 458 |||||||||||||||||||| Sbjct: 87 ggcttccatttccagccgga 106
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cgccgccgtgcttgccgcct 226 |||||||||||||||||||| Sbjct: 1740159 cgccgccgtgcttgccgcct 1740178
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gcgctcgtcgtcgccgccgc 257 |||||||||||||||||||| Sbjct: 32887342 gcgctcgtcgtcgccgccgc 32887361
>gb|DQ139267.1| Triticum aestivum 4-hydroxyphenylpyruvate dioxygenase mRNA, complete cds Length = 1588 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 ctgccctcctcctccgccgacgcc 156 |||||||||| ||||||||||||| Sbjct: 349 ctgccctccttctccgccgacgcc 372
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 cgcctcggccgtgctggcgc 241 |||||||||||||||||||| Sbjct: 2606919 cgcctcggccgtgctggcgc 2606938
>gb|AC127142.3| Rattus norvegicus 4 BAC CH230-41K13 (Children's Hospital Oakland Research Institute) complete sequence Length = 238669 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gagttcccgaggagcagggg 344 |||||||||||||||||||| Sbjct: 184939 gagttcccgaggagcagggg 184958
>gb|BT009036.1| Triticum aestivum clone wdk4c.pk006.m9:fis, full insert mRNA sequence Length = 1614 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 ctgccctcctcctccgccgacgcc 156 |||||||||| ||||||||||||| Sbjct: 348 ctgccctccttctccgccgacgcc 371
>ref|XM_971345.1| PREDICTED: Tribolium castaneum hypothetical protein LOC662904 (LOC662904), mRNA Length = 1779 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 cctcctcctccgccgacgccaatg 160 ||||||||||||||| |||||||| Sbjct: 500 cctcctcctccgccgccgccaatg 477
>gb|AC133216.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0049B20, complete sequence Length = 131337 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cctcctcctccgccgacgcc 156 |||||||||||||||||||| Sbjct: 47859 cctcctcctccgccgacgcc 47840
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 catccccggcacgccgccgc 112 |||||||||||||||||||| Sbjct: 92416 catccccggcacgccgccgc 92435
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ccgcctcggccgtgctggcg 240 |||||||||||||||||||| Sbjct: 203433 ccgcctcggccgtgctggcg 203452
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcgctcgtcgtcgccgccgc 257 |||||||||||||||||||| Sbjct: 102833 gcgctcgtcgtcgccgccgc 102814
>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06, complete sequence Length = 125196 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cctcctcctccgccgacgcc 156 |||||||||||||||||||| Sbjct: 70686 cctcctcctccgccgacgcc 70705
>emb|AJ311165.1|BJA311165 Bradyrhizobium japonicum hemN2 gene (partial), ORF236, ORF403, ORF319, ORF206, ORF560, hmuV gene, hmuU gene, hmuT gene, hmuT gene, hmuR gene, ORF110, ORF167, exbB gene, exbD gene, tonB gene and ORF69 (partial) Length = 16607 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 ctggcgctcgtcgtcgccgccgcg 258 |||||||| ||||||||||||||| Sbjct: 3019 ctggcgctggtcgtcgccgccgcg 3042
>gb|AC023590.8| Homo sapiens chromosome 8, clone RP11-655M22, complete sequence Length = 175582 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 caccggcttccatttccagc 454 |||||||||||||||||||| Sbjct: 55312 caccggcttccatttccagc 55331
>gb|AC159018.3| Pan troglodytes BAC clone CH251-533F3 from chromosome unknown, complete sequence Length = 179366 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 caccggcttccatttccagc 454 |||||||||||||||||||| Sbjct: 80030 caccggcttccatttccagc 80049
>gb|AF395819.1|AF395819 Oryza sativa transcription activator REB (Reb) gene, complete cds Length = 6227 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcgctcgtcgtcgccgccgc 257 |||||||||||||||||||| Sbjct: 1494 gcgctcgtcgtcgccgccgc 1475
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 ccgccgtgcttgccgcctcg 228 |||||||||||||||||||| Sbjct: 4136514 ccgccgtgcttgccgcctcg 4136495
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ctcgtcgtcgccgccgcggt 260 |||||||||||||||||||| Sbjct: 646534 ctcgtcgtcgccgccgcggt 646515
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cctcctcctccgccgacgcc 156 |||||||||||||||||||| Sbjct: 28579896 cctcctcctccgccgacgcc 28579915
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cctcctcctccgccgacgcc 156 |||||||||||||||||||| Sbjct: 26994571 cctcctcctccgccgacgcc 26994552 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cctcctcctccgccgacgcc 156 |||||||||||||||||||| Sbjct: 7707193 cctcctcctccgccgacgcc 7707174
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 tggcgctcgtcgtcgccgcc 255 |||||||||||||||||||| Sbjct: 22596226 tggcgctcgtcgtcgccgcc 22596245
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 tcgtcgtcgccgccgcggtc 261 |||||||||||||||||||| Sbjct: 9130354 tcgtcgtcgccgccgcggtc 9130335
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 tcgtcgtcgccgccgcggtcttcg 265 ||||||||||||||| |||||||| Sbjct: 27524445 tcgtcgtcgccgccgtggtcttcg 27524422 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcgctcgtcgtcgccgccgc 257 |||||||||||||||||||| Sbjct: 2826417 gcgctcgtcgtcgccgccgc 2826398
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cctcctcctccgccgacgcc 156 |||||||||||||||||||| Sbjct: 5082326 cctcctcctccgccgacgcc 5082307
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gcgctcgtcgtcgccgccgc 257 |||||||||||||||||||| Sbjct: 32977852 gcgctcgtcgtcgccgccgc 32977871
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 cctcctcctccgccgacgccaatg 160 ||||||||||||||| |||||||| Sbjct: 22674338 cctcctcctccgccgccgccaatg 22674361
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 ggccgtgctggcgctcgtcg 247 |||||||||||||||||||| Sbjct: 5224100 ggccgtgctggcgctcgtcg 5224081
>gb|AE004639.1| Pseudomonas aeruginosa PAO1, section 200 of 529 of the complete genome Length = 10010 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 ggcttccatttccagccgga 458 |||||||||||||||||||| Sbjct: 244 ggcttccatttccagccgga 263
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 tcgtcgtcgccgccgcggtcttcg 265 ||||||||||||||| |||||||| Sbjct: 88416 tcgtcgtcgccgccgtggtcttcg 88393
>dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0003H03 Length = 157905 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 tcgtcgtcgccgccgcggtc 261 |||||||||||||||||||| Sbjct: 140664 tcgtcgtcgccgccgcggtc 140645
>dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1147_D11 Length = 138444 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cctcctcctccgccgacgcc 156 |||||||||||||||||||| Sbjct: 41364 cctcctcctccgccgacgcc 41345
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 ctggcgctcgtcgtcgccgccgcg 258 |||||||| ||||||||||||||| Sbjct: 7801259 ctggcgctggtcgtcgccgccgcg 7801236
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 cgcaccggcttccatttcca 452 |||||||||||||||||||| Sbjct: 4180576 cgcaccggcttccatttcca 4180595
>dbj|AP006450.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1130E07 Length = 152245 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 tggcgctcgtcgtcgccgcc 255 |||||||||||||||||||| Sbjct: 38146 tggcgctcgtcgtcgccgcc 38165
>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0024F06 Length = 129402 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 cctcctcctccgccgacgccaatg 160 ||||||||||||||| |||||||| Sbjct: 51050 cctcctcctccgccgccgccaatg 51073
>dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1331F11 Length = 132205 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 tggcgctcgtcgtcgccgcc 255 |||||||||||||||||||| Sbjct: 111427 tggcgctcgtcgtcgccgcc 111446
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cctcctcctccgccgacgcc 156 |||||||||||||||||||| Sbjct: 124440 cctcctcctccgccgacgcc 124421
>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1364A02 Length = 137933 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcgctcgtcgtcgccgccgc 257 |||||||||||||||||||| Sbjct: 129978 gcgctcgtcgtcgccgccgc 129959
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 tcgtcgtcgccgccgcggtc 261 |||||||||||||||||||| Sbjct: 65848 tcgtcgtcgccgccgcggtc 65829
>dbj|AK112099.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-E06, full insert sequence Length = 3089 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cctcctcctccgccgacgcc 156 |||||||||||||||||||| Sbjct: 289 cctcctcctccgccgacgcc 270
>dbj|AK111914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128F17, full insert sequence Length = 3052 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cctcctcctccgccgacgcc 156 |||||||||||||||||||| Sbjct: 272 cctcctcctccgccgacgcc 253
>emb|X97642.1|TGINV5GEN T.gesneriana mRNA for invertase 5 Length = 2121 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 415 gccatgctgcagtggcagcgcaccggcttccatttccagccgga 458 ||||||||||| |||||| | || || |||||||||||| |||| Sbjct: 282 gccatgctgcaatggcagaggactgggttccatttccagacgga 325
>emb|AJ000693.1|HVAJ693 Hordeum vulgare mRNA for 4-hydroxyphenylpyruvate dioxygenase Length = 1565 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 ctgccctcctcctccgccgacgcc 156 |||||||||| ||||||||||||| Sbjct: 333 ctgccctccttctccgccgacgcc 356
>dbj|AK109126.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-D05, full insert sequence Length = 851 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 cctcctcctccgccgacgccaatg 160 ||||||||||||||| |||||||| Sbjct: 460 cctcctcctccgccgccgccaatg 483
>dbj|AK107635.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-E08, full insert sequence Length = 1971 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 tggcgctcgtcgtcgccgcc 255 |||||||||||||||||||| Sbjct: 431 tggcgctcgtcgtcgccgcc 450
>dbj|AK068589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153H07, full insert sequence Length = 1720 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcgctcgtcgtcgccgccgc 257 |||||||||||||||||||| Sbjct: 524 gcgctcgtcgtcgccgccgc 505
>dbj|AK065458.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023D18, full insert sequence Length = 1435 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcgctcgtcgtcgccgccgc 257 |||||||||||||||||||| Sbjct: 131 gcgctcgtcgtcgccgccgc 112
>dbj|AB101647.1| Oryza sativa (japonica cultivar-group) Roc4 mRNA for GL2-type homeodomain protein, complete cds Length = 2957 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cctcctcctccgccgacgcc 156 |||||||||||||||||||| Sbjct: 152 cctcctcctccgccgacgcc 133
>dbj|AB021736.1| Oryza sativa (indica cultivar-group) gene for bZIP protein, complete cds Length = 5651 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcgctcgtcgtcgccgccgc 257 |||||||||||||||||||| Sbjct: 1984 gcgctcgtcgtcgccgccgc 1965
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cctcctcctccgccgacgcc 156 |||||||||||||||||||| Sbjct: 27321624 cctcctcctccgccgacgcc 27321605 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cctcctcctccgccgacgcc 156 |||||||||||||||||||| Sbjct: 7777280 cctcctcctccgccgacgcc 7777261
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 tgctggcgctcgtcgtcgccgccg 256 ||||||||||| |||||||||||| Sbjct: 457459 tgctggcgctcctcgtcgccgccg 457482
>emb|AL683888.10| Mouse DNA sequence from clone RP23-462C12 on chromosome X, complete sequence Length = 200089 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 acagtactaccagacgatcc 477 |||||||||||||||||||| Sbjct: 146062 acagtactaccagacgatcc 146043
>dbj|D78609.1|RICBZIPPA Oryza sativa (japonica cultivar-group) mRNA for bZIP protein, complete cds Length = 1696 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcgctcgtcgtcgccgccgc 257 |||||||||||||||||||| Sbjct: 489 gcgctcgtcgtcgccgccgc 470
>dbj|AP003496.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1786D2 Length = 150409 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 caccggcttccatttccagc 454 |||||||||||||||||||| Sbjct: 5562 caccggcttccatttccagc 5543 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,629,536 Number of Sequences: 3902068 Number of extensions: 4629536 Number of successful extensions: 102693 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99099 Number of HSP's gapped (non-prelim): 3587 length of query: 485 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 463 effective length of database: 17,147,199,772 effective search space: 7939153494436 effective search space used: 7939153494436 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
