ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet71f03 |
|---|---|
| Clone Library Name | barley_pub |
>PSBP_WHEAT (Q00434) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 203 bits (517), Expect = 1e-52 Identities = 103/138 (74%), Positives = 103/138 (74%) Frame = +1 Query: 37 MASTSCFLHQSTXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXXXXXXXX 216 MASTSCFLHQST VGRTQLFVCKA KNDEAASDAAVVTSRR Sbjct: 1 MASTSCFLHQSTARLAASARPAPAVGRTQLFVCKAQKNDEAASDAAVVTSRRAALSLLAG 60 Query: 217 XXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL 396 YGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL Sbjct: 61 AAAIAVKVSPAAAAYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL 120 Query: 397 RYEDNFDATSNLSVIINP 450 RYEDNFDATSNLSVIINP Sbjct: 121 RYEDNFDATSNLSVIINP 138
>PSBP_CUCSA (Q9SLQ8) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (OEC23) Length = 263 Score = 143 bits (360), Expect = 2e-34 Identities = 74/142 (52%), Positives = 81/142 (57%), Gaps = 4/142 (2%) Frame = +1 Query: 37 MASTSCFLHQSTXXXXXXXXXXXXVGRT----QLFVCKAHKNDEAASDAAVVTSRRXXXX 204 MASTSCFLH QL VC+A K A + V SRR Sbjct: 1 MASTSCFLHHHALTAAARSSSSPRQAALPKSPQLLVCRAQKQQPAQEEEGGVVSRRLALT 60 Query: 205 XXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFP 384 YGEAANVFGK K NTD++ YSG+GFKL IP+KWNPSKEREFP Sbjct: 61 VLIGAAALGSKVSPADAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREFP 120 Query: 385 GQVLRYEDNFDATSNLSVIINP 450 GQVLRYEDNFD+ SNLSVIINP Sbjct: 121 GQVLRYEDNFDSNSNLSVIINP 142
>PSBP_SPIOL (P12302) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 267 Score = 136 bits (342), Expect = 3e-32 Identities = 72/148 (48%), Positives = 87/148 (58%), Gaps = 10/148 (6%) Frame = +1 Query: 37 MASTSCFLHQSTXXXXXXXXXXXXVGRTQL-------FVCKAHKNDEAASDAAVVTS--- 186 MAST+CFLH R Q VCKA K D+ ++A V+ S Sbjct: 1 MASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDD--NEANVLNSGVS 58 Query: 187 RRXXXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPS 366 RR YGEAANVFGK KKNT+F+ Y+G+GFKL++P+KWNPS Sbjct: 59 RRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPS 118 Query: 367 KEREFPGQVLRYEDNFDATSNLSVIINP 450 KE+EFPGQVLRYEDNFDATSNLSV++ P Sbjct: 119 KEKEFPGQVLRYEDNFDATSNLSVLVQP 146
>PSBP_PEA (P16059) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 259 Score = 136 bits (342), Expect = 3e-32 Identities = 70/139 (50%), Positives = 81/139 (58%), Gaps = 3/139 (2%) Frame = +1 Query: 37 MASTSCFLHQS---TXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXXXXX 207 MAST CFLH T + VCKA K D+ V SRR Sbjct: 1 MASTQCFLHHQYAITTPTRTLSQRQVVTTKPNHIVCKAQKQDDVVD---AVVSRRLALSV 57 Query: 208 XXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPG 387 YGEAANVFGKAK NTD++ Y+G+GFKL++PAKWNPSKEREFPG Sbjct: 58 LIGAAAVGSKVSPADAAYGEAANVFGKAKTNTDYLPYNGDGFKLLVPAKWNPSKEREFPG 117 Query: 388 QVLRYEDNFDATSNLSVII 444 QVLRYEDNFDATSN+SV++ Sbjct: 118 QVLRYEDNFDATSNVSVLV 136
>PSBP1_TOBAC (Q7DM39) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 268 Score = 133 bits (335), Expect = 2e-31 Identities = 70/147 (47%), Positives = 81/147 (55%), Gaps = 9/147 (6%) Frame = +1 Query: 37 MASTSCFLHQSTXXXXXXXXXXXXVGRTQL-------FVCKAHKNDEAASDA--AVVTSR 189 MAST CFLHQ + + VC+A K D +VV SR Sbjct: 1 MASTQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSR 60 Query: 190 RXXXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSK 369 R YGEAANVFGK K+NTDF+AY+G+GFKL +PAKWNPSK Sbjct: 61 RLALTVLIGAAAIGSKVSPADAAYGEAANVFGKPKENTDFLAYNGDGFKLQVPAKWNPSK 120 Query: 370 EREFPGQVLRYEDNFDATSNLSVIINP 450 E EFPGQVLRYEDNFD+TSNL V + P Sbjct: 121 EVEFPGQVLRYEDNFDSTSNLIVTVTP 147
>PSBP_SOLTU (P93566) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 130 bits (328), Expect = 1e-30 Identities = 68/138 (49%), Positives = 80/138 (57%), Gaps = 1/138 (0%) Frame = +1 Query: 40 ASTSCFLHQSTXXXXXXXXXXXXVG-RTQLFVCKAHKNDEAASDAAVVTSRRXXXXXXXX 216 AST CFLHQ + +C+A K D+A + + V SRR Sbjct: 3 ASTQCFLHQYHALRSSPARTSSVPSPKPNQLICRAQKQDDANNTSNAV-SRRLALTLLIG 61 Query: 217 XXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL 396 YGEAANVFGK K+NTDF+ Y+G+GFKL IPAKWNPSKE EFPGQVL Sbjct: 62 TAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPGQVL 121 Query: 397 RYEDNFDATSNLSVIINP 450 RYEDNFD+TSNL V + P Sbjct: 122 RYEDNFDSTSNLMVAVTP 139
>PSBP_LYCES (P29795) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 130 bits (327), Expect = 2e-30 Identities = 69/138 (50%), Positives = 82/138 (59%), Gaps = 1/138 (0%) Frame = +1 Query: 40 ASTSCFLHQ-STXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXXXXXXXX 216 AST CFLHQ + +C+A K D+A S+AAV SRR Sbjct: 3 ASTQCFLHQYHALRSSPARTSSVSSPKPNQLICRAQKQDDA-SNAAV--SRRLALTLLIG 59 Query: 217 XXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL 396 YGEAANVFGK K+NTDF+ Y+G+GFKL +PAKWNPSKE E+PGQVL Sbjct: 60 TAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEYPGQVL 119 Query: 397 RYEDNFDATSNLSVIINP 450 RYEDNFD+TSNL V + P Sbjct: 120 RYEDNFDSTSNLIVAVTP 137
>PSBP_SINAL (P11594) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 129 bits (323), Expect = 4e-30 Identities = 66/142 (46%), Positives = 81/142 (57%), Gaps = 4/142 (2%) Frame = +1 Query: 37 MASTSCFLHQSTXXXXXXXXXXXXVGRTQL----FVCKAHKNDEAASDAAVVTSRRXXXX 204 MA ++CFLHQS + + VCKA + E + SRR Sbjct: 1 MAYSACFLHQSALASSTARSSPSSSSQRYVSISKLVCKAQQTHEEDNSTV---SRRLALT 57 Query: 205 XXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFP 384 YGEAANVFGK KKNTDF AYSG+GF++ +PAKWNPS+E E+P Sbjct: 58 LLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYP 117 Query: 385 GQVLRYEDNFDATSNLSVIINP 450 GQVLRYEDNFDATSNL+V++ P Sbjct: 118 GQVLRYEDNFDATSNLNVMVTP 139
>PSBP_FRIAG (O49080) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 264 Score = 127 bits (320), Expect = 1e-29 Identities = 66/144 (45%), Positives = 84/144 (58%), Gaps = 6/144 (4%) Frame = +1 Query: 37 MASTSCFLHQ------STXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXX 198 MAS++CFL +T + +QL +C+A K+ + +++ SRR Sbjct: 1 MASSACFLLHHAPSTPATTSRTPSHRLVPTIKPSQL-ICRAQKSSDTDENSSTAVSRRLA 59 Query: 199 XXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKERE 378 YGEAANVFGKAK NTDF+ Y+G+GF L+IPAKWNPSKE E Sbjct: 60 LTILIGSAAVGTKIAPANAAYGEAANVFGKAKTNTDFLPYTGDGFNLLIPAKWNPSKEVE 119 Query: 379 FPGQVLRYEDNFDATSNLSVIINP 450 FPGQVLRYEDNFD TSN+SV + P Sbjct: 120 FPGQVLRYEDNFDVTSNVSVTVTP 143
>PSBP1_ARATH (Q42029) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 263 Score = 126 bits (316), Expect = 3e-29 Identities = 64/145 (44%), Positives = 82/145 (56%), Gaps = 7/145 (4%) Frame = +1 Query: 37 MASTSCFLHQSTXXXXXXXXXXXXVGRTQL-------FVCKAHKNDEAASDAAVVTSRRX 195 MA ++CFLHQS + + +CKA ++ E + A SRR Sbjct: 1 MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQSHEDDNSAV---SRRL 57 Query: 196 XXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKER 375 YGEAANVFGK K NTDF+ Y+G+GFK+ +PAKWNPSKE Sbjct: 58 ALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEI 117 Query: 376 EFPGQVLRYEDNFDATSNLSVIINP 450 E+PGQVLR+EDNFDATSNL+V++ P Sbjct: 118 EYPGQVLRFEDNFDATSNLNVMVTP 142
>PSBP2_TOBAC (P18212) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 265 Score = 122 bits (305), Expect = 5e-28 Identities = 66/144 (45%), Positives = 78/144 (54%), Gaps = 6/144 (4%) Frame = +1 Query: 37 MASTSCFLHQSTXXXXXXXXXXXXVGRT----QLFVCKAHKNDEAASDA--AVVTSRRXX 198 MAST CFLH + + QL VC+A K D +V SRR Sbjct: 1 MASTQCFLHHHALSTPARTPLVRSIVPSLKPNQLLVCRAQKQSAPQEDNVNSVSVSRRLA 60 Query: 199 XXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKERE 378 YGEAANVFGK K +TDF Y+G+GFKL IP+KWNP+KE E Sbjct: 61 LTVLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVE 120 Query: 379 FPGQVLRYEDNFDATSNLSVIINP 450 +PGQVLR+EDNFDATSN+ V I P Sbjct: 121 YPGQVLRFEDNFDATSNVIVAITP 144
>PSBP3_TOBAC (Q04127) Oxygen-evolving enhancer protein 2-3, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 266 Score = 120 bits (301), Expect = 2e-27 Identities = 65/145 (44%), Positives = 76/145 (52%), Gaps = 7/145 (4%) Frame = +1 Query: 37 MASTSCFLHQSTXXXXXXXXXXXXV----GRTQLFVCKAHKNDEAASDA---AVVTSRRX 195 MAST CFLH + QL VC+A A +V SRR Sbjct: 1 MASTQCFLHHHALSTPARTSLVRGIVPSLKSNQLLVCRAQNKQSAPQQDNVNSVSVSRRL 60 Query: 196 XXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKER 375 YGEAANVFGK K +TDF Y+G+GFKL IP+KWNP+KE Sbjct: 61 ALTLLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEV 120 Query: 376 EFPGQVLRYEDNFDATSNLSVIINP 450 E+PGQVLR+EDNFDATSN+ V I P Sbjct: 121 EYPGQVLRFEDNFDATSNVIVAITP 145
>PSBP2_ARATH (O49344) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 120 bits (301), Expect = 2e-27 Identities = 67/146 (45%), Positives = 81/146 (55%), Gaps = 8/146 (5%) Frame = +1 Query: 37 MASTSCFLHQSTXXXXXXXXXXXX--------VGRTQLFVCKAHKNDEAASDAAVVTSRR 192 MA + FLHQS + R VC+A ++ E + A V R Sbjct: 1 MAYSPSFLHQSALASSAGRSSSSSSSSFRHVSLSRPVHLVCRAQQSQENNNSA--VFRRL 58 Query: 193 XXXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKE 372 YGEAANVFGK KKNTDF+ Y+GEGFK+ IP+KWNPSKE Sbjct: 59 ALTLLVGAAAIGSKVSPAPXAAYGEAANVFGKPKKNTDFLPYTGEGFKIQIPSKWNPSKE 118 Query: 373 REFPGQVLRYEDNFDATSNLSVIINP 450 E+PGQVLR+EDNFDATSN+SV+I P Sbjct: 119 IEYPGQVLRFEDNFDATSNVSVMITP 144
>PSBP_NARPS (Q40407) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 116 bits (290), Expect = 3e-26 Identities = 61/144 (42%), Positives = 79/144 (54%), Gaps = 6/144 (4%) Frame = +1 Query: 37 MASTSCFLHQ-----STXXXXXXXXXXXXVGRTQLFVCKAHKND-EAASDAAVVTSRRXX 198 MAST+CFLH +T + Q + + + A++ + SRR Sbjct: 1 MASTACFLHHHAPSPATSNLSRTRSATNRDEQQQEHSARLQSPEADCATENDALLSRRLA 60 Query: 199 XXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKERE 378 YGE+ANVFGK K NTDF +G+GFK++IP+KWNPSKE E Sbjct: 61 LTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKWNPSKEVE 120 Query: 379 FPGQVLRYEDNFDATSNLSVIINP 450 FPGQVLRYEDNFD TSN+ V++NP Sbjct: 121 FPGQVLRYEDNFDTTSNVGVMVNP 144
>PSBP_BRAJU (Q96334) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (Fragment) Length = 217 Score = 109 bits (273), Expect = 3e-24 Identities = 51/95 (53%), Positives = 61/95 (64%) Frame = +1 Query: 166 DAAVVTSRRXXXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMI 345 D SRR YGEAANVFGK K NTDF A +G+GF++ + Sbjct: 2 DDTSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFTAINGDGFQVQV 61 Query: 346 PAKWNPSKEREFPGQVLRYEDNFDATSNLSVIINP 450 PAKWNPS+E E+PGQVLRYEDNFDATSNL+V++ P Sbjct: 62 PAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTP 96
>PSBP_CHLRE (P11471) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) Length = 245 Score = 94.0 bits (232), Expect = 2e-19 Identities = 40/61 (65%), Positives = 50/61 (81%) Frame = +1 Query: 259 YGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVLRYEDNFDATSNLSV 438 YG++ANVFGK + FV Y+G+GF L++PAKWNPSKE +FPG +LRYEDNFDA +NL V Sbjct: 59 YGDSANVFGKVTNKSGFVPYAGDGFALLLPAKWNPSKENDFPGVILRYEDNFDAVNNLVV 118 Query: 439 I 441 I Sbjct: 119 I 119
>PSBP1_PHYPA (P80660) Oxygen-evolving enhancer protein 2 (OEE2) (20 kDa subunit| of oxygen evolving system of photosystem II) (Fragments) Length = 43 Score = 35.0 bits (79), Expect = 0.086 Identities = 20/49 (40%), Positives = 24/49 (48%) Frame = +1 Query: 292 KKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVLRYEDNFDATSNLSV 438 KK T F + G GF L +P E + EDNFDAT+NL V Sbjct: 1 KKQTGFTPFIGNGFSLDVPXSITEYGPXE------KXEDNFDATNNLFV 43
>PSBP_EUGGR (P83687) Oxygen-evolving enhancer protein 2 (OEE2) (23 kDa subunit| of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (Fragment) Length = 30 Score = 33.5 bits (75), Expect = 0.25 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = +1 Query: 259 YGEAANVFGKAKKNTDFVAYSGEGF 333 YGE ANVFGK K+ F SG+G+ Sbjct: 2 YGEGANVFGKRKETDQFFEISGDGW 26
>TERT_HUMAN (O14746) Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase| catalytic subunit) (HEST2) (Telomerase-associated protein 2) (TP2) Length = 1132 Score = 29.6 bits (65), Expect = 3.6 Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 8/49 (16%) Frame = -3 Query: 157 PRHSCAPCRRTAGCARR-----REQGAPR---QPGARWTGGGSRRWTPL 35 P H+ P RR GC R RE G P PGAR GG + R PL Sbjct: 187 PPHASGP-RRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPL 234
>PA2G3_HUMAN (Q9NZ20) Group 3 secretory phospholipase A2 precursor (EC 3.1.1.4)| (Group III secretory phospholipase A2) (Phosphatidylcholine 2-acylhydrolase GIII) (GIII sPLA2) Length = 509 Score = 29.6 bits (65), Expect = 3.6 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = +3 Query: 306 LRGVQRRGVQTDDPGQVEPQQGA*VPWAGAPLRGQLRRHQQPLRYNQ 446 LR +Q+R Q D G E Q PW PLRG + + Q L+ Q Sbjct: 454 LRRLQQRRHQLQDKGTDERQ-----PWPSEPLRGPMSFYNQCLQLTQ 495
>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC| 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 550 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -3 Query: 97 GAPRQPGARWTGGGSRR 47 GAPR PG R GGG+RR Sbjct: 525 GAPRGPGGRPPGGGNRR 541
>UPPP_LACPL (Q88SK7) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl| pyrophosphate phosphatase) (Bacitracin resistance protein) Length = 275 Score = 28.5 bits (62), Expect = 8.1 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -2 Query: 395 STCPGNSRSLLGFHLAGIISLNPSPLYATKSVFFFALPNTF 273 S PG SRS G + G I + S AT+ FF A+P F Sbjct: 163 SLIPGTSRS--GATILGAILIGTSRYVATEFSFFMAIPTMF 201 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,944,730 Number of Sequences: 219361 Number of extensions: 751869 Number of successful extensions: 2332 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 2259 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2318 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
