Clone Information

BLAST Search Result

Clone Name	baet71f02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	206	2e-53
2	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	191	6e-49
3	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	189	4e-48
4	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	187	1e-47
5	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	185	4e-47
6	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	185	6e-47
7	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	184	1e-46
8	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	184	1e-46
9	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	183	2e-46
10	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	182	3e-46
11	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	182	3e-46
12	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	181	8e-46
13	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	181	1e-45
14	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	179	2e-45
15	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	179	2e-45
16	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	178	7e-45
17	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	176	2e-44
18	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	176	2e-44
19	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	176	3e-44
20	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	173	2e-43
21	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	172	3e-43
22	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	172	4e-43
23	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	171	6e-43
24	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	170	1e-42
25	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	169	2e-42
26	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	169	2e-42
27	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	169	2e-42
28	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	168	7e-42
29	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	167	9e-42
30	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	167	9e-42
31	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	167	9e-42
32	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	166	2e-41
33	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	166	4e-41
34	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	165	5e-41
35	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	164	1e-40
36	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	152	5e-37
37	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	150	1e-36
38	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	147	2e-35
39	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	145	4e-35
40	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	145	5e-35
41	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	145	5e-35
42	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	145	5e-35
43	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	144	8e-35
44	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	143	2e-34
45	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	143	2e-34
46	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	142	5e-34
47	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	140	2e-33
48	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	139	4e-33
49	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	137	1e-32
50	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	131	7e-31
51	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	130	1e-30
52	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	125	4e-29
53	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	124	9e-29
54	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	122	3e-28
55	CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...	122	3e-28
56	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	116	2e-26
57	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	90	3e-18
58	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	82	5e-16
59	CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...	76	5e-14
60	LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...	70	2e-12
61	CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...	69	8e-12
62	CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...	64	2e-10
63	LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...	62	7e-10
64	CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla...	55	1e-07
65	CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop...	54	3e-07
66	CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch...	53	3e-07
67	CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch...	52	1e-06
68	CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...	50	2e-06
69	CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloropl...	44	2e-04
70	CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloropl...	43	4e-04
71	CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...	39	0.006
72	FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ...	37	0.019
73	CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...	36	0.042
74	CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo...	36	0.042
75	CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29	35	0.072
76	CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloropl...	32	0.79
77	SHC1_HUMAN (P29353) SHC transforming protein 1 (SH2 domain prote...	31	1.3
78	GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	30	2.3
79	CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloropl...	30	3.0
80	DOCK5_HUMAN (Q9H7D0) Dedicator of cytokinesis protein 5 (Fragment)	30	3.0
81	GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	30	3.0
82	DIG1_CAEEL (Q09165) Mesocentin precursor	29	5.1
83	SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic inosit...	29	5.1
84	GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--...	29	6.7
85	GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--...	29	6.7
86	GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	6.7
87	GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	6.7
88	PHC2_MOUSE (Q9QWH1) Polyhomeotic-like protein 2 (mPH2) (Early de...	29	6.7
89	NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Si...	29	6.7
90	MUC1_YEAST (P08640) Mucin-like protein 1 precursor	28	8.7
91	GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	8.7
92	GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	8.7
93	GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	8.7
94	MEN1_HUMAN (O00255) Menin	28	8.7
95	TIR1_YEAST (P10863) Cold shock-induced protein TIR1 precursor (S...	28	8.7
96	S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (G...	28	8.7
97	MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (E...	28	8.7
98	ERG7_HUMAN (P48449) Lanosterol synthase (EC 5.4.99.7) (Oxidosqua...	28	8.7
99	SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)	28	8.7

>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score =  206 bits (524), Expect = 2e-53
 Identities = 97/107 (90%), Positives = 100/107 (93%)
 Frame = +3

Query: 117 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 296
           GKAVK+LPSSAL G+ARV MRKTAAKAK V    PWYGSDRVLYLGPLSG+PPSYLTGEF
Sbjct: 15  GKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEF 74

Query: 297 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 121

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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score =  191 bits (486), Expect = 6e-49
 Identities = 95/108 (87%), Positives = 99/108 (91%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXX-XPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GKAV ++PSS+ FGEARVTMRKTAAKAKP      PWYG DRVLYLGPLSG+PPSYLTGE
Sbjct: 15  GKAV-NVPSSS-FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGE 72

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score =  189 bits (479), Expect = 4e-48
 Identities = 95/108 (87%), Positives = 98/108 (90%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXX-XPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GKAV ++PSS LFGEARVTMRKTAAKAKP      PWYG DRVLYLGPLSG+PPSYLTGE
Sbjct: 15  GKAV-NVPSS-LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGE 72

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 120

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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score =  187 bits (475), Expect = 1e-47
 Identities = 89/100 (89%), Positives = 92/100 (92%), Gaps = 1/100 (1%)
 Frame = +3

Query: 141 SSALFGEARVTMRKTAAKAKPVXXX-XPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 317
           SSALFGEAR+TMRKTAAK KP      PWYG+DRVLYLGPLSG+PPSYLTGEFPGDYGWD
Sbjct: 21  SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 80

Query: 318 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 81  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 120

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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score =  185 bits (470), Expect = 4e-47
 Identities = 89/108 (82%), Positives = 94/108 (87%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GKAVK  PSS+ + G  +VTMRKTA+KAKPV    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 14  GKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 73

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 74  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 121

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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score =  185 bits (469), Expect = 6e-47
 Identities = 89/108 (82%), Positives = 92/108 (85%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GKAVK  PSS+ + G  RVTMRKTA KAKP     PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 122

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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score =  184 bits (467), Expect = 1e-46
 Identities = 88/108 (81%), Positives = 94/108 (87%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GKAVK  PSS+ + G  +VTMRKTA+KAKPV    PWYG +RV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGE 74

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 122



 Score = 28.5 bits (62), Expect = 8.7
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 410
           +PG   +D  GL+ DPE FA+ +  E+ + R AM    G
Sbjct: 191 YPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 228

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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score =  184 bits (467), Expect = 1e-46
 Identities = 89/108 (82%), Positives = 93/108 (86%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GKAVK  PSS+ + G  +VTMRKTA KAKPV    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 14  GKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 73

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 74  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 121



 Score = 28.5 bits (62), Expect = 8.7
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 410
           +PG   +D  GL+ DPE FA+ +  E+ + R AM    G
Sbjct: 190 YPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 227

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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score =  183 bits (464), Expect = 2e-46
 Identities = 83/99 (83%), Positives = 90/99 (90%)
 Frame = +3

Query: 141 SSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 320
           ++ +FGE R+TMRK+AAK KP     PWYG+DRVLYLGPLSG+PPSYLTGEFPGDYGWDT
Sbjct: 18  AAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 77

Query: 321 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           AGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 78  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 116

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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score =  182 bits (463), Expect = 3e-46
 Identities = 87/108 (80%), Positives = 92/108 (85%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GKAVK  PSS+ + G  +VTMRKT  KAKP+    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 122

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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score =  182 bits (463), Expect = 3e-46
 Identities = 88/108 (81%), Positives = 93/108 (86%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GKAVK  PSS+ + G  +VTMRKTA+KAK V    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 122

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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score =  181 bits (459), Expect = 8e-46
 Identities = 87/108 (80%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GKAVK  P+ S + GE R+TMRKTA K K V    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGE 74

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 122

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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score =  181 bits (458), Expect = 1e-45
 Identities = 86/108 (79%), Positives = 90/108 (83%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GK VK  PSS+ + G  + TMRKTA KAKPV    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL AR
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFAR 122

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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score =  179 bits (455), Expect = 2e-45
 Identities = 84/107 (78%), Positives = 87/107 (81%)
 Frame = +3

Query: 117 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 296
           GKAV    SS + G  + TMRKT  KAKPV    PWYG DRV YLGP SG+ PSYLTGEF
Sbjct: 15  GKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74

Query: 297 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL AR
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFAR 121

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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score =  179 bits (455), Expect = 2e-45
 Identities = 86/108 (79%), Positives = 90/108 (83%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GKAVK  PSS+ + G  + TMRKT  KAKPV    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 75  FPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 122

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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score =  178 bits (451), Expect = 7e-45
 Identities = 85/108 (78%), Positives = 89/108 (82%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           G AVK  PSS+ + G  +  MRKT  KAKPV    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 122



 Score = 28.5 bits (62), Expect = 8.7
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 258 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 410
           ++G P   +T        +D  GL+ DPE FA+ +  E+ + R AM    G
Sbjct: 178 VAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 228

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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score =  176 bits (447), Expect = 2e-44
 Identities = 84/108 (77%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVK-DLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GKAVK    SS + G  +VTMRKT  KAKP     PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL AR
Sbjct: 75  FPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFAR 122

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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score =  176 bits (447), Expect = 2e-44
 Identities = 80/96 (83%), Positives = 84/96 (87%)
 Frame = +3

Query: 150 LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGL 329
           +FGE R+TMRKTAAK KP     PWYG+DRVLYLGPLSG PPSYLTGEFPGDYGWDT GL
Sbjct: 24  VFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGL 83

Query: 330 SADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           SADPETFAKNRELEVIHCRWA+   LGCVFPELLAR
Sbjct: 84  SADPETFAKNRELEVIHCRWAIAVGLGCVFPELLAR 119

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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score =  176 bits (445), Expect = 3e-44
 Identities = 86/108 (79%), Positives = 90/108 (83%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLP-SSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GKAVK  P +S +FG  RVTMRKT     P     PWYGSDRV YLGP SG+PPSYLTGE
Sbjct: 15  GKAVKLSPGASEVFGTGRVTMRKTVKPTGP--SGSPWYGSDRVKYLGPFSGEPPSYLTGE 72

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 73  FPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 120

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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score =  173 bits (439), Expect = 2e-43
 Identities = 85/108 (78%), Positives = 90/108 (83%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           G+AVK  PS+  + G  RV+MRKT AK  PV    PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GQAVKLSPSAPEITGNGRVSMRKTVAK--PVASSSPWYGPDRVKYLGPFSGESPSYLTGE 72

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score =  172 bits (437), Expect = 3e-43
 Identities = 81/107 (75%), Positives = 85/107 (79%)
 Frame = +3

Query: 117 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 296
           GKAV    SS +    +VTMRKT  KAKPV    PWYG DRV YLGP SG+ PSYLTGEF
Sbjct: 15  GKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74

Query: 297 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           PGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL AR
Sbjct: 75  PGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFAR 121

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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score =  172 bits (436), Expect = 4e-43
 Identities = 84/108 (77%), Positives = 89/108 (82%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           G+AVK  PS S + G  R+TMRK  AK+ P     PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GQAVKLSPSASEISGNGRITMRKAVAKSAP--SSSPWYGPDRVKYLGPFSGESPSYLTGE 72

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score =  171 bits (434), Expect = 6e-43
 Identities = 78/95 (82%), Positives = 81/95 (85%)
 Frame = +3

Query: 153 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 332
           FGE R+TMRKT  K K      PWYG DRV YLGP SG+PPSYLTGEFPGDYGWDTAGLS
Sbjct: 23  FGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 82

Query: 333 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           ADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 83  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 117

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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score =  170 bits (431), Expect = 1e-42
 Identities = 86/108 (79%), Positives = 92/108 (85%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GKAVK+L SS+ + G+ARV+MRKTAA  K      PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKNLSSSSEVQGDARVSMRKTAATKK---VGSPWYGPDRVKYLGPFSGESPSYLTGE 71

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLAR 119

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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score =  169 bits (429), Expect = 2e-42
 Identities = 80/99 (80%), Positives = 83/99 (83%), Gaps = 1/99 (1%)
 Frame = +3

Query: 144 SALFGEARVTMRK-TAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 320
           + + GEARVTMRK T  K        PWYG DRVLYLGP SG+PPSYLTGEFPGDYGWDT
Sbjct: 31  AGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90

Query: 321 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           AGLSADPE FAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 91  AGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLAR 129



 Score = 29.3 bits (64), Expect = 5.1
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 258 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 410
           ++G P   +T        +D  GL+ DPE FA+ +  E+ + R AM    G
Sbjct: 185 IAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 235

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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score =  169 bits (429), Expect = 2e-42
 Identities = 85/108 (78%), Positives = 88/108 (81%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GKAVK  PSS+ LFG  RV+MRKT    K      PWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKVAPSSSELFGNGRVSMRKTV---KAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGE 71

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 119

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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score =  169 bits (429), Expect = 2e-42
 Identities = 85/108 (78%), Positives = 89/108 (82%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GKAVK  P+ S + G  RVTMRKT AK K      PWYGSDRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGS-PWYGSDRVKYLGPFSGESPSYLTGE 73

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 74  FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 121

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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score =  168 bits (425), Expect = 7e-42
 Identities = 80/107 (74%), Positives = 85/107 (79%)
 Frame = +3

Query: 117 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 296
           GK +K  PSS   G AR TMRK+A   K      PWYG DRV YLGP SG+ PSYLTGEF
Sbjct: 18  GKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEF 77

Query: 297 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 78  PGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSR 124

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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score =  167 bits (424), Expect = 9e-42
 Identities = 84/108 (77%), Positives = 88/108 (81%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           GKAV   P+ S + G  RVTMRKT AK K      PWYGSDRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGS-PWYGSDRVKYLGPFSGESPSYLTGE 73

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 74  FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 121

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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score =  167 bits (424), Expect = 9e-42
 Identities = 82/108 (75%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           G+AVK  P++  + G A+ TMRKTA+K+  V    PWYG DRV YLGP SG+PPSYLTGE
Sbjct: 5   GQAVKLSPNAPEIQGNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 62

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 63  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 110

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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score =  167 bits (424), Expect = 9e-42
 Identities = 80/100 (80%), Positives = 84/100 (84%)
 Frame = +3

Query: 138 PSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 317
           PS+   G  RV+MRKTA+K   V    PWYG DRV YLGP SG+PPSYLTGEFPGDYGWD
Sbjct: 3   PSTPQLGVGRVSMRKTASKT--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 60

Query: 318 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 61  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 100

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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score =  166 bits (421), Expect = 2e-41
 Identities = 79/95 (83%), Positives = 82/95 (86%), Gaps = 1/95 (1%)
 Frame = +3

Query: 156 GEARVTMRK-TAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 332
           GEAR+TMRK T  K+       PWYG DRVLYLGP SG+PPSYLTGEFPGDYGWDTAGLS
Sbjct: 39  GEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98

Query: 333 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           ADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 99  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 133

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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score =  166 bits (419), Expect = 4e-41
 Identities = 78/95 (82%), Positives = 82/95 (86%), Gaps = 1/95 (1%)
 Frame = +3

Query: 156 GEARVTMRK-TAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 332
           GEAR+TMRK T  K+       PWYG DRV+YLGP SG+PPSYLTGEFPGDYGWDTAGLS
Sbjct: 39  GEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98

Query: 333 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           ADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 99  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 133

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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score =  165 bits (418), Expect = 5e-41
 Identities = 83/107 (77%), Positives = 87/107 (81%)
 Frame = +3

Query: 117 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 296
           GKAVK  PS+   G  RV+MRKT  K   V    PWYG DRV YLGP SG+PPSYLTGEF
Sbjct: 16  GKAVKLGPSAPEVG--RVSMRKTVTKQ--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 71

Query: 297 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 72  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 118

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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score =  164 bits (415), Expect = 1e-40
 Identities = 77/100 (77%), Positives = 81/100 (81%)
 Frame = +3

Query: 138 PSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 317
           PSS   G AR TMRK+A   K      PWYG DRV YLGP SG+ PSYLTGEFPGDYGWD
Sbjct: 24  PSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 83

Query: 318 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           TAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 84  TAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSR 123

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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score =  152 bits (383), Expect = 5e-37
 Identities = 76/106 (71%), Positives = 80/106 (75%)
 Frame = +3

Query: 120 KAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFP 299
           K V +L      GEARV M    +KA        WYGSDR LYLGP SG PPSYL+GEFP
Sbjct: 18  KPVNELSRKVGAGEARVQMMAPKSKAP---SGSIWYGSDRPLYLGPFSGSPPSYLSGEFP 74

Query: 300 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+
Sbjct: 75  GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 120

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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score =  150 bits (380), Expect = 1e-36
 Identities = 70/95 (73%), Positives = 76/95 (80%)
 Frame = +3

Query: 153 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 332
           FGE R+TMR+T   A        WYG DR  YLGP S   PSYLTGEFPGDYGWDTAGLS
Sbjct: 30  FGEGRITMRRTVKSAPQSI----WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85

Query: 333 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++
Sbjct: 86  ADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score =  147 bits (370), Expect = 2e-35
 Identities = 69/95 (72%), Positives = 74/95 (77%)
 Frame = +3

Query: 153 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 332
           FG  R TMR+T   A        WYG DR  YLGP S   PSYLTGEFPGDYGWDTAGLS
Sbjct: 30  FGGGRATMRRTVKSAPQSI----WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85

Query: 333 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++
Sbjct: 86  ADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score =  145 bits (367), Expect = 4e-35
 Identities = 70/94 (74%), Positives = 76/94 (80%)
 Frame = +3

Query: 156 GEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSA 335
           G  RV+MR+T  K+ P      WYG DR  YLGP S   PSYLTGEFPGDYGWDTAGLSA
Sbjct: 31  GGGRVSMRRTV-KSAPTSI---WYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSA 86

Query: 336 DPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           DPETFAKNRELEVIHCRWAMLGALGCVFPE+L++
Sbjct: 87  DPETFAKNRELEVIHCRWAMLGALGCVFPEILSK 120

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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score =  145 bits (366), Expect = 5e-35
 Identities = 69/93 (74%), Positives = 74/93 (79%)
 Frame = +3

Query: 159 EARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 338
           +AR+TMR+T   A        WYG DR  YLGP S   PSYLTGEFPGDYGWDTA +SAD
Sbjct: 33  QARITMRRTVRSAPESI----WYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSAD 88

Query: 339 PETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           PETFAKNRELEVIHCRWAMLGALGCVFPELLA+
Sbjct: 89  PETFAKNRELEVIHCRWAMLGALGCVFPELLAK 121

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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score =  145 bits (366), Expect = 5e-35
 Identities = 70/91 (76%), Positives = 73/91 (80%)
 Frame = +3

Query: 165 RVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPE 344
           RV+MR+T   A        WYG DR  YLGP S   PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 33  RVSMRRTIKSAPESI----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 88

Query: 345 TFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           TFAKNRELEVIHCRWAMLGALGCVFPELLA+
Sbjct: 89  TFAKNRELEVIHCRWAMLGALGCVFPELLAK 119

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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score =  145 bits (366), Expect = 5e-35
 Identities = 69/95 (72%), Positives = 74/95 (77%)
 Frame = +3

Query: 153 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 332
           F   RVTMR+T   A        WYG DR  YLGP S   PSYLTGEFPGDYGWDTAGLS
Sbjct: 2   FEGGRVTMRRTVKSAPQSI----WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 57

Query: 333 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++
Sbjct: 58  ADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 92

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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score =  144 bits (364), Expect = 8e-35
 Identities = 68/95 (71%), Positives = 73/95 (76%)
 Frame = +3

Query: 153 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 332
           F   R TMR+T   A        WYG DR  YLGP S   PSYLTGEFPGDYGWDTAGLS
Sbjct: 30  FNGGRATMRRTVKSAPQSI----WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85

Query: 333 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++
Sbjct: 86  ADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score =  143 bits (361), Expect = 2e-34
 Identities = 65/80 (81%), Positives = 68/80 (85%)
 Frame = +3

Query: 198 KPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 377
           K      PW+G D V YLGP SG+ PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Sbjct: 4   KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 63

Query: 378 HCRWAMLGALGCVFPELLAR 437
           H RWAMLGALGCVFPELL+R
Sbjct: 64  HSRWAMLGALGCVFPELLSR 83

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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score =  143 bits (360), Expect = 2e-34
 Identities = 69/95 (72%), Positives = 73/95 (76%)
 Frame = +3

Query: 153 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 332
           FG+AR TMR+T   A        WYG DR  YLGP S   PSYLTGEFPGDYGWDTAGLS
Sbjct: 30  FGQARFTMRRTVKSAPESI----WYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLS 85

Query: 333 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           ADPETFA+NRELEVIH RWAMLGALGC FPELL +
Sbjct: 86  ADPETFARNRELEVIHSRWAMLGALGCTFPELLEK 120

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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score =  142 bits (357), Expect = 5e-34
 Identities = 70/108 (64%), Positives = 82/108 (75%), Gaps = 1/108 (0%)
 Frame = +3

Query: 120 KAVKDLPSSALFG-EARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 296
           K V +L    L   EARVTMR+T +K+        WYG+DR  +LGP SG+ PSYL GEF
Sbjct: 19  KPVNELSRKVLGNVEARVTMRRTVSKS--AGSDTIWYGADRPKFLGPFSGETPSYLNGEF 76

Query: 297 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLART 440
            GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA++
Sbjct: 77  AGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKS 124



 Score = 29.3 bits (64), Expect = 5.1
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +3

Query: 258 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 410
           ++G P   +T        +D  GL+ DP+TFA+ +  E+ + R AM    G
Sbjct: 179 VAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 229

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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score =  140 bits (352), Expect = 2e-33
 Identities = 66/91 (72%), Positives = 72/91 (79%)
 Frame = +3

Query: 165 RVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPE 344
           R+TMR+T   A        WYG DR  YLGP S   PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 32  RITMRRTVKSAPQSI----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87

Query: 345 TFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           TFA+NRELEVIH RWAMLGALGCVFPE+L++
Sbjct: 88  TFARNRELEVIHSRWAMLGALGCVFPEILSK 118

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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score =  139 bits (350), Expect = 4e-33
 Identities = 67/93 (72%), Positives = 75/93 (80%)
 Frame = +3

Query: 159 EARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 338
           + R +MR+T  KA P      WYG+DR  +LGP S   PSYLTGEFPGDYGWDTAGLSAD
Sbjct: 31  DGRFSMRRTV-KAVPQSI---WYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 86

Query: 339 PETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           PETFAKNRELEVIH RWAMLGALGC+FPELL++
Sbjct: 87  PETFAKNRELEVIHSRWAMLGALGCIFPELLSK 119

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>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score =  137 bits (346), Expect = 1e-32
 Identities = 73/107 (68%), Positives = 78/107 (72%)
 Frame = +3

Query: 117 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 296
           G+A+K  PS+   G  RV+MRKTA K   V    PWYG DRV YLGP SG+ PSYLTGEF
Sbjct: 15  GQAMKLAPSTPELGVGRVSMRKTAPKT--VSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 72

Query: 297 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
            G        LSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 73  HG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 111

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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score =  131 bits (330), Expect = 7e-31
 Identities = 59/76 (77%), Positives = 62/76 (81%)
 Frame = +3

Query: 222 WYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 401
           WYG DRV YLGP S   PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLG
Sbjct: 47  WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 106

Query: 402 ALGCVFPELLARTASV 449
           ALGC+FPE+L +   V
Sbjct: 107 ALGCIFPEVLEKWVKV 122



 Score = 30.8 bits (68), Expect = 1.8
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 410
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226

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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score =  130 bits (328), Expect = 1e-30
 Identities = 59/76 (77%), Positives = 62/76 (81%)
 Frame = +3

Query: 222 WYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 401
           WYG DRV YLGP S   PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 50  WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109

Query: 402 ALGCVFPELLARTASV 449
           ALGCVFPE+L +   V
Sbjct: 110 ALGCVFPEVLQKWVGV 125



 Score = 30.4 bits (67), Expect = 2.3
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 410
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G
Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFG 229

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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score =  125 bits (315), Expect = 4e-29
 Identities = 63/100 (63%), Positives = 72/100 (72%)
 Frame = +3

Query: 159 EARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 338
           +A  T +  AA AK       WYG DR  +LGP S + P+YLTGEFPGDYGWDTAGLSAD
Sbjct: 20  KAAGTKQTKAAPAK--SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSAD 77

Query: 339 PETFAKNRELEVIHCRWAMLGALGCVFPELLARTASVRRG 458
           PETF K RELEVIH RWA+LGALG + PELL+  A V+ G
Sbjct: 78  PETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFG 117



 Score = 30.4 bits (67), Expect = 2.3
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +3

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 410
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM    G
Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFG 217

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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score =  124 bits (312), Expect = 9e-29
 Identities = 56/61 (91%), Positives = 58/61 (95%)
 Frame = +3

Query: 255 PLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 434
           P SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH  WAMLGALGCVFPELL+
Sbjct: 1   PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60

Query: 435 R 437
           R
Sbjct: 61  R 61

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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  122 bits (307), Expect = 3e-28
 Identities = 63/102 (61%), Positives = 75/102 (73%), Gaps = 2/102 (1%)
 Frame = +3

Query: 147 ALFGEARVTMRKTAAKAK-PVXXXXPWYGSDRVLYLGPLSGDP-PSYLTGEFPGDYGWDT 320
           AL    + T +KTAAKA  P      +YG +R  +LGP S +  P+YLTGEFPGDYGWDT
Sbjct: 10  ALQVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDT 69

Query: 321 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARTAS 446
           AGLSADPETF + RELE+IH RWAMLGALGC  PELLA++ +
Sbjct: 70  AGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGT 111

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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score =  122 bits (307), Expect = 3e-28
 Identities = 66/98 (67%), Positives = 70/98 (71%)
 Frame = +3

Query: 141 SSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 320
           SS L   A  TM K AAK+K            RV YLGP SG+ PSYLTGEFPGDYGWDT
Sbjct: 30  SSTLIVTAGFTMLKHAAKSKVSSSTC----DRRVKYLGPFSGEWPSYLTGEFPGDYGWDT 85

Query: 321 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 434
           AGLSA PETFAKNRELEVIH R AM  ALGC+FPELL+
Sbjct: 86  AGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLS 123

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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  116 bits (291), Expect = 2e-26
 Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
 Frame = +3

Query: 222 WYGSDRVLYLGPLS-GDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 398
           +YG DR  +LGP S  D P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L
Sbjct: 33  FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92

Query: 399 GALGCVFPELLARTASVRRG 458
           GALG + PELL++ A V+ G
Sbjct: 93  GALGILTPELLSQYAGVQFG 112



 Score = 30.0 bits (66), Expect = 3.0
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +3

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 410
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM   LG
Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLG 214

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>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 49/96 (51%), Positives = 57/96 (59%)
 Frame = +3

Query: 171 TMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETF 350
           T +   A +K       +YG D       L    P   TGEFPGDYGWDTAGLSADPETF
Sbjct: 40  TKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETF 98

Query: 351 AKNRELEVIHCRWAMLGALGCVFPELLARTASVRRG 458
            + RELE+IH R  +LGALG V PELLA    ++ G
Sbjct: 99  KRYRELELIHARCGLLGALGMVTPELLADEDGIKFG 134



 Score = 32.0 bits (71), Expect = 0.79
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +3

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 410
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM   LG
Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLG 235

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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 82.4 bits (202), Expect = 5e-16
 Identities = 44/98 (44%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
 Frame = +3

Query: 147 ALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYL--GPLS-GDPPSYLTGEFPGDYGWD 317
           ALF + +    K+ A ++       WYG DR ++L  G L   + P YL GE  GDYG+D
Sbjct: 37  ALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYD 96

Query: 318 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 431
             GL   PE FAK +  E+IH RWAMLGA G + PE L
Sbjct: 97  PFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEAL 134

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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
 Frame = +3

Query: 117 GKAVKDLPSSALFGEA-RVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 293
           G  V    +S L G   RV+   T   A+           DR L+       PP +L G 
Sbjct: 24  GSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFP--GSTPPPWLDGS 81

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
            PGD+G+D  GL++DPE+   N++ E++HCRWAMLGA G   PELL +
Sbjct: 82  LPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTK 129

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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 33/58 (56%), Positives = 40/58 (68%)
 Frame = +3

Query: 270 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARTA 443
           PP YLTGE  GD G+D AGL+ADP TF + +  EV HCR +ML  +GC+ PELL   A
Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELLGNGA 437



 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 31/66 (46%), Positives = 43/66 (65%)
 Frame = +3

Query: 261 SGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLART 440
           + +PP+ LTGE+P D G+D   L+ADP+ +A+ R  EV H R AML  +GC+ PELL + 
Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGKG 252

Query: 441 ASVRRG 458
           A    G
Sbjct: 253 AWFEAG 258



 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 28/55 (50%), Positives = 38/55 (69%)
 Frame = +3

Query: 273 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           PS+L GE+ GD G+D AGL+ADP+TF + R  EV H R AML  +G + P+ L +
Sbjct: 12  PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGK 66

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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 68.6 bits (166), Expect = 8e-12
 Identities = 28/56 (50%), Positives = 37/56 (66%)
 Frame = +3

Query: 270 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           PP +L G  PGD+G+D  GL +DPE+   N + E++H RWAMLGA G   PE L +
Sbjct: 74  PPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTK 129

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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
 Frame = +3

Query: 258 LSGDP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 431
           + G P PSYL G  PGD+G+D+ GL   P    + +E E+IHCRWAML   G + PE L
Sbjct: 50  MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL 108

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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 62.0 bits (149), Expect = 7e-10
 Identities = 27/58 (46%), Positives = 39/58 (67%)
 Frame = +3

Query: 270 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARTA 443
           PP++LTGE+P D G+D   ++ADP  +A+ R  EV H R +ML  +G + PELL + A
Sbjct: 168 PPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGKGA 225



 Score = 33.5 bits (75), Expect = 0.27
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 339 PETFAKNRELEVIHCRWAMLGALGCVFPELL 431
           P  + + R  EV + R AML  +GCV+PELL
Sbjct: 1   PTVYERMRVAEVFNGRLAMLAIVGCVYPELL 31

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>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 24/55 (43%), Positives = 33/55 (60%)
 Frame = +3

Query: 273 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 437
           P YLTG   GD G+D  GL+ DPE      + E+++ RWAMLG  G + PE+  +
Sbjct: 64  PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTK 118

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>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +3

Query: 273 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 410
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAML  LG
Sbjct: 73  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLG 118

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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 24/46 (52%), Positives = 27/46 (58%)
 Frame = +3

Query: 273 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 410
           P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113

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>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 23/46 (50%), Positives = 27/46 (58%)
 Frame = +3

Query: 273 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 410
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 68  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113

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>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
 Frame = +3

Query: 228 GSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRW 389
           G++R L+    S    SYL G  PGD+G+D  GLS DPE    F + + L   EVI+ R+
Sbjct: 50  GANRQLWFA--SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRF 106

Query: 390 AMLGALGCVFPELLARTASV 449
           AMLGA G + PE+L +   +
Sbjct: 107 AMLGAAGAIAPEILGKAGLI 126

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>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor|
           (LHCII type I CAB-3B) (LHCP) (Fragments)
          Length = 267

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 22/37 (59%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = +3

Query: 117 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPW 224
           GKAVK  PSS+ + G  R+TMRKTAAK KP     PW
Sbjct: 15  GKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPW 51

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>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor|
           (LHCII type I CAB-3A) (LHCP) (Fragments)
          Length = 267

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 21/37 (56%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +3

Query: 117 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPW 224
           GK VK  PSS+ + G  R+TMRKTAAK KP     PW
Sbjct: 15  GKTVKLAPSSSEITGNGRITMRKTAAKPKPASSGSPW 51

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>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 43/150 (28%), Positives = 53/150 (35%), Gaps = 46/150 (30%)
 Frame = +3

Query: 120 KAVKDLPSSALFGEARV---TMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTG 290
           + V D+ S++    AR    T + +  KAK V        SDR L+        P YL G
Sbjct: 17  RVVSDISSNSSRFTARFGFGTKKASPKKAKTVI-------SDRPLWFP--GAKSPEYLDG 67

Query: 291 EFPGDYGWDTAGLSADPE-----------TFAKN-------------------------- 359
              GDYG+D  GL    E             AKN                          
Sbjct: 68  SLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEV 127

Query: 360 ------RELEVIHCRWAMLGALGCVFPELL 431
                 RE E+IH RWAML  LG +  E L
Sbjct: 128 FGLQRFRECELIHGRWAMLATLGAITVEWL 157



 Score = 32.7 bits (73), Expect = 0.46
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +3

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 410
           +PG   +D  GL++DP   A+ +  E+ H R AM+G LG
Sbjct: 214 YPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252

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>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = +3

Query: 249 LGPLSGDPPSYLT-GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 422
           + P +G   S L  G  PGD G+D  GL+ +DP+ F   +E E+ H R AM+ A G +  
Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191

Query: 423 ELLA 434
           E ++
Sbjct: 192 EAVS 195

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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 36.2 bits (82), Expect = 0.042
 Identities = 37/124 (29%), Positives = 43/124 (34%), Gaps = 44/124 (35%)
 Frame = +3

Query: 192 KAKPVXXXXPWYGSDRVL-YLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPE-------- 344
           KA P         +DR L Y G +S   P +L G   GDYG+D  GL    E        
Sbjct: 40  KAAPKKSAKKTVTTDRPLWYPGAIS---PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDS 96

Query: 345 ---TFAKN--------------------------------RELEVIHCRWAMLGALGCVF 419
                AKN                                RE E+IH RWAML  LG + 
Sbjct: 97  LDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALS 156

Query: 420 PELL 431
            E L
Sbjct: 157 VEWL 160



 Score = 34.7 bits (78), Expect = 0.12
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +3

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 410
           +PG   +D  GL+ADPE  A+ +  E+ H R AM+  LG
Sbjct: 217 YPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255

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>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 36.2 bits (82), Expect = 0.042
 Identities = 30/102 (29%), Positives = 35/102 (34%), Gaps = 43/102 (42%)
 Frame = +3

Query: 267 DPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------------------ 359
           +PP +L G   GD G+D  GL    E             AKN                  
Sbjct: 64  NPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPT 123

Query: 360 --------------RELEVIHCRWAMLGALGCVFPELLARTA 443
                         RE E+IH RWAMLG LG +  E L   A
Sbjct: 124 PFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIA 165



 Score = 30.0 bits (66), Expect = 3.0
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 294 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 407
           +PG Y +D  GL+ADPE     +  E+ H R AM+  L
Sbjct: 218 YPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254

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>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 35.4 bits (80), Expect = 0.072
 Identities = 30/108 (27%), Positives = 36/108 (33%), Gaps = 45/108 (41%)
 Frame = +3

Query: 273 PSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 359
           P +L G  PGD G+D  GLS   E             AKN                    
Sbjct: 59  PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118

Query: 360 --------------RELEVIHCRWAMLGALGCVFPELLARTASVRRGR 461
                         RE E+IH RWAML  LG +  E     + V  G+
Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVEAGK 166

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>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor|
           (LHCII type I CAB-1C) (LHCP) (Fragments)
          Length = 265

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 117 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPW 224
           G+AVK  PS S + G  R+TMRK  AK+ P     PW
Sbjct: 15  GQAVKLSPSASEISGNGRITMRKAVAKSAP--SSSPW 49

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>SHC1_HUMAN (P29353) SHC transforming protein 1 (SH2 domain protein C1) (Src|
           homology 2 domain-containing transforming protein C1)
          Length = 583

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +1

Query: 223 GTAPTACSTSARSPATPR---AT*PVSFPVTTDGTLRGSLPTPRPLP 354
           G AP A   +A +  TP    AT PV  PV  D  +R  +P P P P
Sbjct: 371 GAAPGAARPTAPNAQTPSHLGATLPVGQPVGGDPEVRKQMPPPPPCP 417

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>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 373

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
 Frame = +3

Query: 156 GEARVTMRKTAAKAKP-VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 332
           G A   +R T  +    V    PW+G ++   L    G P  + +  FPG  G    G+ 
Sbjct: 107 GPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVG 166

Query: 333 ADPETFAKNRELEVIHCR 386
           AD    A  R++   H R
Sbjct: 167 ADR---AYGRDIVEAHYR 181

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>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type I CAB-1A) (LHCP) (Fragments)
          Length = 265

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 117 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPW 224
           G+AVK  PS S   G  R+TMRK  AK+ P     PW
Sbjct: 15  GQAVKLSPSASENSGNGRITMRKAVAKSAP--SSSPW 49

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>DOCK5_HUMAN (Q9H7D0) Dedicator of cytokinesis protein 5 (Fragment)|
          Length = 804

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = +1

Query: 223 GTAPTACSTSARSPATPRAT*PVSFP-VTTDGTLRGSLPTPRP---LPRTGSWR*ST 381
           G++P   +  +  P TP+AT  +S P + TDG     +P P P    P  GS R ST
Sbjct: 713 GSSPPQSTPLSPPPLTPKATRTLSSPSLQTDGIAATPVPPPPPPKSKPYEGSQRNST 769

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>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase)
          Length = 392

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +3

Query: 162 ARVTMRKTAAKA-KPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 338
           A   +R T  K  + V    PW+G ++   L  ++G P  +    FPG  G    G+ AD
Sbjct: 109 AETNLRHTCKKIMEMVNDHRPWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168

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>DIG1_CAEEL (Q09165) Mesocentin precursor|
          Length = 13100

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -2

Query: 434   GEQLGEDAAERAEHGPPAVDHLQLPVLGKGLGVGREPRSVPSVVTGKLTGQ 282
             G+ L  DA+ +  H     D  QLP    G  +G +   VP+ V+G+   Q
Sbjct: 11506 GQVLPTDASGKTVHSVYGPDGTQLPTDASGSAIGPDGELVPTDVSGRPLSQ 11556

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>SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 2)
          Length = 1496

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
 Frame = -3

Query: 418  KTQPSAPSMAHRQWITSSSRFLAKVSGSAESPAVSHP*SPGNSPVK*LGG----SPES-G 254
            + + SAP+  H Q + S+S+ L  ++ S+ SP+   P +P   P   LG     SPE+ G
Sbjct: 1343 RRKKSAPAAFHLQVLQSNSQLLQGLTCSSSSPSPPKPDTPLLYPQMALGTSSAISPETDG 1402

Query: 253  PR 248
            PR
Sbjct: 1403 PR 1404

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>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = +3

Query: 204 VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 383
           V    PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H 
Sbjct: 123 VSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179

Query: 384 R 386
           R
Sbjct: 180 R 180

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>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = +3

Query: 162 ARVTMRKTAAKAKP-VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 338
           A   +R T  +    V    PW+G ++   L    G P  + +  FPG  G    G+ AD
Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167

Query: 339 PETFAKNRELEVIHCR 386
               A  R++   H R
Sbjct: 168 K---AYGRDIVEAHYR 180

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>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = +3

Query: 162 ARVTMRKTAAKAKP-VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 338
           A   +R T  +    V    PW+G ++   L    G P  + +  FPG  G    G+ AD
Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGAD 167

Query: 339 PETFAKNRELEVIHCR 386
               A  R++   H R
Sbjct: 168 K---AYRRDIMEAHYR 180

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>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = +3

Query: 162 ARVTMRKTAAKAKP-VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 338
           A   +R T  +    V    PW+G ++   L    G P  + +  FPG  G    G+ AD
Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167

Query: 339 PETFAKNRELEVIHCR 386
               A  R++   H R
Sbjct: 168 K---AYGRDIVEAHYR 180

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>PHC2_MOUSE (Q9QWH1) Polyhomeotic-like protein 2 (mPH2) (Early development|
           regulatory protein 2) (p36)
          Length = 850

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = -3

Query: 460 RPRRTDAVRASSSGKTQPSAPSMAHRQWITSSSRFLAKVSG---SAESPAVSHP*SPGNS 290
           R ++T A  AS    TQP  PS+A +   +SS    A   G   +  SPA + P    N+
Sbjct: 231 RTQQTPAAAASGPPPTQPVLPSLALKPTPSSSQPLPAPPQGRTMAQGSPAGAKPSGTDNA 290

Query: 289 P 287
           P
Sbjct: 291 P 291

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>NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator|
            of retinoic acid and thyroid hormone receptor) (SMRT)
            (SMRTe) (Thyroid-, retinoic-acid-receptor-associated
            corepressor) (T3 receptor-associating factor) (TRAC)
          Length = 2472

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +1

Query: 238  ACSTSARSPATPRAT*PVSFPVTTDGTLRGSLPT---PRPLPRTGS 366
            A STS  SP  P AT P +      GTL G  PT   P  LP+  S
Sbjct: 1856 ARSTSTSSPVRPAATFPPATHCPLGGTLEGVYPTLMEPVLLPKETS 1901

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>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 226 TAPTACST--SARSPATPRAT*PVSFPVTTDGTLRGSLPTPRPLPRT 360
           +AP   ST  S+ +P T   T   S PVT+  T   S P P P   T
Sbjct: 419 SAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSST 465

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>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = +3

Query: 204 VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 383
           V    PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H 
Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179

Query: 384 R 386
           R
Sbjct: 180 R 180

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>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = +3

Query: 162 ARVTMRKTAAKAKP-VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 338
           A   +R T  +    V    PW+G ++   L    G P  + +  FPG  G    G+ AD
Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167

Query: 339 PETFAKNRELEVIHCR 386
               A  R++   H R
Sbjct: 168 R---AYGRDIVEAHYR 180

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>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = +3

Query: 204 VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 383
           V    PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H 
Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179

Query: 384 R 386
           R
Sbjct: 180 R 180

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>MEN1_HUMAN (O00255) Menin|
          Length = 615

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
 Frame = -2

Query: 440 RAGEQLGEDAAERAEHGPPAVDHLQLPVLGKGLGVGR-----EPRSVPSVVTGKLTG 285
           R G + G     + E  PP     + P L KGLG G+      PR  P  V G   G
Sbjct: 481 REGRRRGPRRESKPEEPPPP----KKPALDKGLGTGQGAVSGPPRKPPGTVAGTARG 533

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>TIR1_YEAST (P10863) Cold shock-induced protein TIR1 precursor (Serine-rich|
           protein 1)
          Length = 254

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 21/98 (21%), Positives = 35/98 (35%)
 Frame = -3

Query: 442 AVRASSSGKTQPSAPSMAHRQWITSSSRFLAKVSGSAESPAVSHP*SPGNSPVK*LGGSP 263
           ++   +S    PS+ +        SSS      + S+ S A S   +P +S  K    +P
Sbjct: 108 SLNGDASSSAAPSSSAAPTSSAAPSSSAAPTSSAASSSSEAKSSSAAPSSSEAKSSSAAP 167

Query: 262 ESGPR*STRSEPYHXXXXXXXXXXXXXLRMVTRASPKS 149
            S    S+ + P                  +T A+P S
Sbjct: 168 SSSEAKSSSAAPSSSEAKSSSAAPSSTEAKITSAAPSS 205

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>S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington|
           disease gene regulatory region-binding protein 1)
           (HDBP-1)
          Length = 387

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 21/79 (26%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
 Frame = +3

Query: 123 AVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGP----LSGDPPSYLTG 290
           A +  P  A   E       T+    P+    P         L P    L   P SY + 
Sbjct: 92  AQRATPGKARLDEVMAAAALTSLSTSPLLLGAPVAAFSPEPGLEPWKEALVRPPGSYSSS 151

Query: 291 EFPGDYGWDTAGLSADPET 347
              GD+GWD A   + P T
Sbjct: 152 SNSGDWGWDLASDQSSPST 170

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>MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (EC 3.6.3.44)|
            (Glutathione S-conjugate transporting ATPase 7)
            (ATP-energized glutathione S-conjugate pump 7)
          Length = 1493

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -3

Query: 388  HRQWITSSSRFLAKVSGSAESPAVSH 311
            +RQ+  S++R LA++SG + SP V H
Sbjct: 1076 YRQYYISAARELARLSGISRSPLVQH 1101

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>ERG7_HUMAN (P48449) Lanosterol synthase (EC 5.4.99.7)|
           (Oxidosqualene--lanosterol cyclase)
           (2,3-epoxysqualene--lanosterol cyclase) (OSC)
          Length = 732

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 9/86 (10%)
 Frame = +3

Query: 222 WYGSDRVLYLGPLSGDPPS---------YLTGEFPGDYGWDTAGLSADPETFAKNRELEV 374
           W+G +    +G    D  +         +L      D GW     S +   + ++ + ++
Sbjct: 590 WFGLEAFACMGQTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRYLQSAQSQI 649

Query: 375 IHCRWAMLGALGCVFPELLARTASVR 452
            +  WAM+G +    P++ A+   VR
Sbjct: 650 HNTCWAMMGLMAVRHPDIEAQERGVR 675

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>SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)|
          Length = 586

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 17/48 (35%), Positives = 19/48 (39%)
 Frame = +1

Query: 223 GTAPTACSTSARSPATPRAT*PVSFPVTTDGTLRGSLPTPRPLPRTGS 366
           GTA  + +TSA SP   R   P   P           P P P P  GS
Sbjct: 41  GTATASAATSAASPGPERRPPPAQAPAPQPA------PQPAPTPSVGS 82


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,666,475
Number of Sequences: 219361
Number of extensions: 991032
Number of successful extensions: 3897
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 3548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3866
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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