ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet71f01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YAL0_ICMV (Q08588) Hypothetical AL0 protein 30 3.2
2PHLB_MYCTU (P95246) Phospholipase C 2 precursor (EC 3.1.4.3) 29 4.1
3PHLN_PSEAE (P15713) Non-hemolytic phospholipase C precursor (EC ... 29 5.4
4PHLA_MYCTU (Q04001) Phospholipase C 1 precursor (EC 3.1.4.3) (MT... 29 5.4
5PHLC_PSEAE (P06200) Hemolytic phospholipase C precursor (EC 3.1.... 28 9.2

>YAL0_ICMV (Q08588) Hypothetical AL0 protein|
          Length = 102

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = +3

Query: 309 WMKRLNPTIDGVTGAEWNPANASDPSSGRRVYFGDGAQF 425
           W  +    I   T  E NPA  S P+S R V  GDG  F
Sbjct: 28  WYHQPGQHISIQTFRELNPAPTSSPTSTRTVILGDGEHF 66



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>PHLB_MYCTU (P95246) Phospholipase C 2 precursor (EC 3.1.4.3)|
          Length = 521

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
 Frame = +3

Query: 252 IKTVMVVVMENRSFDHMLGWM---KRLNPTIDGVTGAE--WNP-ANASDPS 386
           I+ +++++ ENRSFDH  G +   +  + T   V  A+  WNP   A DP+
Sbjct: 52  IEHIVLLMQENRSFDHYFGTLSDTRGFDDTTPPVVFAQSGWNPMTQAVDPA 102



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>PHLN_PSEAE (P15713) Non-hemolytic phospholipase C precursor (EC 3.1.4.3)|
           (PLC-N) (Phosphatidylcholine cholinephosphohydrolase)
           (Phosphatidylcholine-hydrolyzing phospholipase C)
           (PC-PLC)
          Length = 692

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +3

Query: 252 IKTVMVVVMENRSFDHMLGWMKRLNPTIDGVTGAEWNPANASDPSSGRRVYFGDGAQ 422
           ++ V++++ ENRSFDH  G       T+ GV G  +    A     G+RV+   G++
Sbjct: 48  VEHVVILMQENRSFDHYFG-------TLKGVRG--FGDRMAIPLPDGQRVWHQKGSK 95



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>PHLA_MYCTU (Q04001) Phospholipase C 1 precursor (EC 3.1.4.3) (MTP40 antigen)|
          Length = 520

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
 Frame = +3

Query: 252 IKTVMVVVMENRSFDHMLGWMKR---LNPTIDGVTGAEWNP-ANASDPS 386
           I+ +++++ ENRSFDH  G +      N          WNP   A DP+
Sbjct: 51  IEHIVLLMQENRSFDHYFGTLSSTNGFNAASPAFQQMGWNPMTQALDPA 99



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>PHLC_PSEAE (P06200) Hemolytic phospholipase C precursor (EC 3.1.4.3) (PLC-H)|
           (Heat labile-hemolysin) (Phosphatidylcholine
           cholinephosphohydrolase)
          Length = 730

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +3

Query: 252 IKTVMVVVMENRSFDHMLGWMKRLNPTIDGVTGAEWNPANASDPSSGRRVYF 407
           ++ V++++ ENRSFDH  G        ++GV G  +N   A     G+ V++
Sbjct: 51  VQHVVILMQENRSFDHYFG-------HLNGVRG--FNDPRALKRQDGKPVWY 93


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,640,193
Number of Sequences: 219361
Number of extensions: 755246
Number of successful extensions: 2044
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2044
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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