ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet71e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TOC34_ARATH (Q38906) Translocase of chloroplast 34 (EC 3.6.5.-) ... 31 0.73
2CAD22_MOUSE (Q9WTP5) Cadherin-22 precursor (Pituitary and brain ... 30 1.6

>TOC34_ARATH (Q38906) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa|
           chloroplast outer envelope protein) (GTP-binding protein
           OEP34) (AtToc34)
          Length = 313

 Score = 31.2 bits (69), Expect = 0.73
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +1

Query: 169 REWVGLQQFPAATQT 213
           REW+G+QQFP ATQ+
Sbjct: 8   REWIGIQQFPPATQS 22



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>CAD22_MOUSE (Q9WTP5) Cadherin-22 precursor (Pituitary and brain cadherin)|
           (PB-cadherin)
          Length = 813

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 21/49 (42%), Positives = 27/49 (55%)
 Frame = +1

Query: 49  VLFPVSEHLPAESRV*PPAESASLSPGGKEERAVMAAPIPREWVGLQQF 195
           +L P+  HL A S    PA S SLSPG +E+  + A  + R WV  Q F
Sbjct: 23  LLLPLLGHLWAAST---PAPS-SLSPGAQEDNQLGAGRVKRGWVWNQFF 67


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,435,698
Number of Sequences: 219361
Number of extensions: 361122
Number of successful extensions: 928
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 80,573,946
effective HSP length: 61
effective length of database: 67,192,925
effective search space used: 1612630200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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